fd4964511a
refactor(.gitignore): added quill dir to gitignore
2025-02-23 11:27:23 -05:00
411a767dc4
feat(probe): added probe namespace
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Probe handles LogManager (for tracking multiple log files) as well as a few utility functions such as wait, pause, glVisView, and rayView (future)
2025-02-23 11:26:41 -05:00
17fea1e046
build(quill): added quill config to build-config
2025-02-23 11:25:39 -05:00
c25b0ff38d
build(quill): added quill as a subproject
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quill provides a robust and very efficient asyncronous and thread safe logging module. I have brought this in to handle logging
2025-02-23 11:25:11 -05:00
eb0b274e2b
test(tests/probe): added probe tests
2025-02-23 11:22:08 -05:00
6f61f5be1e
docs(.gitignore): added .log to gitignore
2025-02-23 10:43:34 -05:00
7dee9ca39d
Merge branch 'main' into feature/logging
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Restore deleted config code so that tests can compile correctly
2025-02-21 10:40:39 -05:00
a20a150c85
fix(config): restored deleted code
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I accidently deleted some cacheing mechanisms, these have been restored
2025-02-21 10:39:43 -05:00
98ead4f06c
build(probe): updated build system to include probe and probe tests
2025-02-21 10:31:57 -05:00
c049e3d91c
test(tests/probe): logging module test suite started
2025-02-21 10:31:24 -05:00
95f943b45a
feat(probe): probe logging module first implimentation
2025-02-21 10:30:59 -05:00
9925f56e34
fix(poly): polytrope converges to solution
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first commit where the polytrope module converges to a solution. I have not yet validated if it is a correct solution
2025-02-20 16:05:02 -05:00
776174c093
refactor(macros): added macros class
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macros provides a unified place to define macros which can be accessed at other points in the code. I defined a DEPRICATION_WARNING_OFF macro so we can disable those warnings for times when we cannot control them
2025-02-20 16:04:05 -05:00
ff299f8ce7
fix(poly): changed lambda from fespace to scalar
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previously I had a lagrangian multipliers at every element; however, we are enforcing a global constraint so there need only be one lagrangian multiplier
2025-02-20 15:36:46 -05:00
a0811dc0c4
test(tests/poly): poly solver test
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added test for the polytropic solver (which is also being used to validate and confirm it works)
2025-02-20 15:28:30 -05:00
1fd1e624f2
feat(poly): lagrangian constrained weak form of 3D lane-Emden
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added a basic implimentation of the 3D lane emden equation using a lagrangian multiplier to constrain the value at the center of a spherical domain
2025-02-20 15:28:00 -05:00
31bc77159b
ci(github-actions): updated meson version
2025-02-20 11:12:42 -05:00
85cd0a597b
ci(github-actions): updated static library path
2025-02-20 11:09:32 -05:00
38901b619f
ci(github-actions): updated path to google tests install dir on ubuntu
2025-02-20 11:07:23 -05:00
24e1fbf8c2
ci(github-actions): removed fedorah, arch, and macOS from targets
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will add them back in latter
2025-02-20 11:03:01 -05:00
7d540311cf
ci(github-actions): updated action to install meson
2025-02-20 11:01:03 -05:00
deab5be0c1
refactor(.gitignore): fast forward gitignore
2025-02-20 10:57:05 -05:00
e54a5be967
docs(config): rebuild docs and removed redundant documentation
2025-02-20 09:45:47 -05:00
796d8a9021
Merge pull request #15 from tboudreaux/performance/configCache
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Added Cache to Config Class
2025-02-20 09:39:27 -05:00
b94ed435e1
fix(tests/config): fixed unknownKeyTest name
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unknownKeyTest was named incorrectly
2025-02-20 09:32:20 -05:00
16cdf9ac32
test(tests/config): tests updated to deal with cache
2025-02-20 09:31:03 -05:00
2dcff35e01
perf(config): added cache
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In order to prevent traversing the YAML tree I have added a hash map (O(1) lookup) to cache already accessed config variables. I have also added a vector to store keys requested but not found so we do not need to check for those every time
2025-02-20 09:30:43 -05:00
47b833e0d2
docs(docs): rebuilt docs
2025-02-19 16:24:41 -05:00
fac54201ff
Merge pull request #14 from tboudreaux/feature/config
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Added Config module
2025-02-19 16:21:39 -05:00
8bf62b68d0
test(tests/config): config tests added
2025-02-19 16:12:23 -05:00
a134878e67
feat(config): config class added
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At many points in the code we may want configurable options, the Config class usses a yaml file to make this easy. It also allows for namespace references "opac:lowtemp:file" etc...
2025-02-19 16:11:55 -05:00
53fc943129
build(yaml-cpp): added yaml-cpp as a dependency
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config files will be written in yaml, added a well tested yaml parser to 4DSSE
2025-02-19 14:50:44 -05:00
054550393f
test(tests/poly): added very basic polytrope test suite
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Currently only tests default constructor
2025-02-19 14:36:22 -05:00
b939fd68fa
feat(poly): added first pass implimentation of 3D constrained lane-emden solver
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This has not currently been tested and this commit should not be viewed as scientifically complete
2025-02-19 14:35:15 -05:00
98162d002e
build(src/meson.build): added poly module to build system
2025-02-19 14:34:31 -05:00
4979475a98
build(meshIO): defined meshio_ dependency
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libraries which need mesh_io can now use meshio_dep which will automatically link and include headers for meshIO
2025-02-19 14:33:28 -05:00
096d9b278c
Merge pull request #13 from tboudreaux/feature/opatOPALII
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Updated OPAT file format and handlers to work for OPAL type I or type II opacity files
2025-02-17 13:07:55 -05:00
dc796be7bf
feat(utils/opatio): updated hash generation to only look at logKappa
2025-02-17 13:02:18 -05:00
df6335d25f
feat(opatIO): fully updated for index vector
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PreviouslyOPAT files were indexed using X and Z now they are indexed with a general index vector.
BREAKING CHANGE: all methods wch used X and Z now use std::vector<double> index (size: header.numIndex) instead. Also added a method to validate tables using checksum
2025-02-17 13:01:34 -05:00
5d51f5b5e0
build(opatIO/meson.build): added PicoSHA2 as a dependency
2025-02-17 13:00:01 -05:00
f44a07bac3
build(meson.build): updated to build PicoSHA2
2025-02-17 12:59:16 -05:00
f973fec061
build(mk): added debug symbols when building with tests
2025-02-17 12:58:51 -05:00
9ae69d82fc
test(tests/opatIO): updated tests for index vector based search
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previously tests used X and Z. Nw they use a general index vector
2025-02-17 12:58:08 -05:00
33d269c411
feat(subprojects/PicoSHA2): added picosha subproject to compute checksums
2025-02-17 12:57:03 -05:00
131161e1bd
feat(utils/opatio): updated save to ascii function and fixed minor bug in loader
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the new general purpose index design introduced a bug in the loader related to the byte position of the byteStart field. This has been resolved. Further, I have updated the save to ascii format to provide an explicit warning that the ascii version is only for debugging purposes and not meant to be used directly.
2025-02-16 20:44:45 -05:00
4ac9340804
docs(specs/opat): updated opat spec for general indexing
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OPAL type II tables use a 4 vector for composition, while many other opacity tables use a 2 vector of composition to index tables. In an attempt to be as general as possible I have updated the OPAT specification to allow for tables indexed by a vector of any length [1, 255]. This should allow a single spec to be used when storeing and accessing type I or type II tables.
BREAKING CHANGE: Careful thought will have to be given to how the C++ module handles this. We want the same code to work for querying data from any kind of opaticy table
2025-02-16 20:43:07 -05:00
c4cd731520
feat(utils/opatio): began update to account for OPAL type II tables (or generally an arbitrary number of index values per table)
2025-02-16 19:03:41 -05:00
9a302fd5d3
Merge pull request #12 from tboudreaux/feature/meshing
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Added base MeshIO class and MFEM in tree building
2025-02-16 15:26:51 -05:00
4158c893d4
docs(tests/meshIO): added comments to meshIO tests
2025-02-16 15:20:24 -05:00
2f753c6ea0
test(tests/meshIO): added basic test suite for meshIO
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just tests the constuctor, getMesh, and isLoaded method. This confirms that a basic spherical mesh can be loaded in correctly
2025-02-16 15:10:13 -05:00
