286 lines
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286 lines
28 KiB
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<div id="projectname">GridFire<span id="projectnumber"> 0.0.1a</span>
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<div id="projectbrief">General Purpose Nuclear Network</div>
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<div class="contents">
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<div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
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<h3><a id="index_a" name="index_a"></a>- a -</h3><ul>
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<li>AdaptiveEngineView() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#ad599363cdd457e72e2e2937b0222c455">gridfire::AdaptiveEngineView</a></li>
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<li>add_reaction() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a14a24cb8ea25a1514134acc51197f1de">gridfire::reaction::LogicalReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#acea41c2ffb010e46bc5cf56f5f244fac">gridfire::reaction::ReactionSet</a></li>
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<li>all_species() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a7dc8fda87e0581fde6da0a81cf4d7224">gridfire::reaction::Reaction</a></li>
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<li>Approx8Network() : <a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#a65066078081c544be4e56e25eb407c8b">gridfire::approx8::Approx8Network</a></li>
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</ul>
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<h3><a id="index_b" name="index_b"></a>- b -</h3><ul>
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<li>begin() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a4ae3806e5e1a802b86a6de292d043476">gridfire::reaction::LogicalReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#afeed26abc72e5c529a76c1da41edfa67">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a228f2a00f46a6ee01be887490a722613">gridfire::reaction::ReactionSet</a></li>
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</ul>
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<h3><a id="index_c" name="index_c"></a>- c -</h3><ul>
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<li>calculate_rate() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a1d2fb3b6a6a1860ace98b32447d1dd1b">gridfire::reaction::LogicalReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ad81e9b2a1773470059ca6989c60556ec">gridfire::reaction::Reaction</a></li>
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<li>calculateAllDerivatives() : <a class="el" href="classgridfire_1_1_graph_engine.html#af41df9ce979b6410e12642cb093916c9">gridfire::GraphEngine</a></li>
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<li>calculateMolarReactionFlow() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a048d4b1d41ecb4125a558d1b9ed7cb31">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#a6633b1757c41dd9e1c397333f4f9e785">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a9245642b741f215e52861d00e756fb3f">gridfire::GraphEngine</a></li>
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<li>calculateRHSAndEnergy() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a7b276b7210be588263395bdb0497fc6d">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_engine.html#ac8b56124b6b49cd1802addb74a9a47c2">gridfire::Engine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a8b3baf29829c7ae0a61430ea70632bbf">gridfire::GraphEngine</a></li>
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<li>calculateSteadyStateAbundances() : <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a00d112f6087f6e3a93f4d40a519308d2">gridfire::solver::QSENetworkSolver</a></li>
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<li>chapter() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a5cb438adfefb640e4bc58e09053bd629">gridfire::reaction::Reaction</a></li>
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<li>clear() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aa8e0d65aafc6e0320690b4906e1bf300">gridfire::reaction::ReactionSet</a></li>
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<li>collectNetworkSpecies() : <a class="el" href="classgridfire_1_1_graph_engine.html#aedf42d83bfcc28313b6b6454034d2efa">gridfire::GraphEngine</a></li>
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<li>constructReactionIndexMap() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a89614f4a48f60c4170a0197f45303e7c">gridfire::AdaptiveEngineView</a></li>
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<li>constructSpeciesIndexMap() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a896d29325b4233e83d9298850b617a2d">gridfire::AdaptiveEngineView</a></li>
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<li>contains() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab92785f331a446e51a0960b75d60b37b">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#ae5f8078e77a700a8356487fbd69ba387">gridfire::reaction::ReactionSet</a></li>
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<li>contains_product() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a074d3cd2421fd5d0133e47f0522403e2">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4bdf50219d686a6cbc0b3cc5365dc18e">gridfire::reaction::ReactionSet</a></li>
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<li>contains_reactant() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#abbe243affa61ba9b2cd2a7b905cd5e45">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a256998eddf292f744d51cdc3e178d4c2">gridfire::reaction::ReactionSet</a></li>
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<li>contains_species() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a5b872a8519740a6d06cfaed03784826a">gridfire::reaction::ReactionSet</a></li>
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<li>convert_netIn() : <a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#a56426da6f1af7eb8a6d1cc70bc8e742a">gridfire::approx8::Approx8Network</a></li>
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</ul>
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<h3><a id="index_d" name="index_d"></a>- d -</h3><ul>
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<li>df() : <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#ac46bd712296b03f31af1573f6a0f5644">gridfire::solver::QSENetworkSolver::EigenFunctor< T ></a></li>
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</ul>
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<h3><a id="index_e" name="index_e"></a>- e -</h3><ul>
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<li>EigenFunctor() : <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#af8650f704c2ca512c9c5b4562b3b0958">gridfire::solver::QSENetworkSolver::EigenFunctor< T ></a></li>
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<li>end() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#af8d23557326e6c8499fa4919ac0bd972">gridfire::reaction::LogicalReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a9707407faf8efd3f4da745a54d3fa9e2">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#abae9fbc4b4306479a6cd3173ac628987">gridfire::reaction::ReactionSet</a></li>
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<li>evaluate() : <a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#a888734a3cdde4259e921e2efece411ee">gridfire::approx8::Approx8Network</a>, <a class="el" href="classgridfire_1_1_network.html#afc8d5172dd0e2295248b42dcb52b655c">gridfire::Network</a>, <a class="el" href="classgridfire_1_1solver_1_1_direct_network_solver.html#a0e8a4b8ef656e0b084d11bea982e412a">gridfire::solver::DirectNetworkSolver</a>, <a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html#ace539b0482db171845ff1bd38d76b70f">gridfire::solver::NetworkSolverStrategy< EngineT ></a>, <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a53b5496db7fed6f345dca39656bf9c0e">gridfire::solver::QSENetworkSolver</a></li>
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<li>excess_energy() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#aa1d71e38fc55ae691dbb9ec459a612a5">gridfire::reaction::Reaction</a></li>
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<li>exportToCSV() : <a class="el" href="classgridfire_1_1_graph_engine.html#a832e2fe066381811a3e0464806ff5e95">gridfire::GraphEngine</a></li>
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<li>exportToDot() : <a class="el" href="classgridfire_1_1_graph_engine.html#adac8c7d62bae76e17fc060e86dadd929">gridfire::GraphEngine</a></li>
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</ul>
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<h3><a id="index_g" name="index_g"></a>- g -</h3><ul>
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<li>generateJacobianMatrix() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#ac9aab6f60e80a9228b2b19b1b10449ef">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#a0a2fb3435ee3271ab9c806f225c61a7f">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#ae347ff0316e532e0298ec8c913908105">gridfire::GraphEngine</a></li>
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<li>generateStoichiometryMatrix() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a231193a61ba5a31e8eb92b0d4ce69111">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#aeae6d84ef74d88fd2cdf07b82e98a16f">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#aed726d36ee2b3796beff6067a1e4db38">gridfire::GraphEngine</a></li>
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<li>getBaseEngine() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#aee095b30a9dce5fcb5ae2fa1d2aa192c">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_engine_view.html#ad294227f8b5cf6d970c349eabf5447a6">gridfire::EngineView< EngineT ></a></li>
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<li>getFormat() : <a class="el" href="classgridfire_1_1_network.html#a315a123499719178286b29e2aca69118">gridfire::Network</a></li>
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<li>getJacobianMatrixEntry() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a4710d218c8a0fd161e994ecd60b48e58">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#a05d15ff35a6bc06a2fa7eda19838bd07">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a303e6093591cde91430f866a04a8be7c">gridfire::GraphEngine</a></li>
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<li>getNetReactionStoichiometry() : <a class="el" href="classgridfire_1_1_graph_engine.html#a8c29d8bbde407e913be5eb77efb2c0c9">gridfire::GraphEngine</a></li>
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<li>getNetworkReactions() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a12cc2f352678fba9688363ba1876ab9c">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#ad2a82099edbb374bbb2c9509ccdb1037">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#ad45650d10fc5dff1673ae3f806d067da">gridfire::GraphEngine</a></li>
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<li>getNetworkSpecies() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#ac83a8efe25c0e5b9bf7756ac3a500bb1">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_engine.html#a020e1b493d6964cafdad08fde697ceb3">gridfire::Engine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a0ed390f3e598ebba4e245ac90bb78767">gridfire::GraphEngine</a></li>
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<li>getSpeciesTimescales() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a93b38d0fdc4647f6f7340172dae17872">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#a5d8ba98b230d2849035ee2507728fa15">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a26215593544c3a52597194602e4e25dd">gridfire::GraphEngine</a></li>
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<li>getStoichiometryMatrixEntry() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a67b4ea8cad115394bb4a42cc39d696f9">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#afa108dd5227dbb1045e90d7b3bd8b84f">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a6b5feaf788bade212b7c8df7ac8c8152">gridfire::GraphEngine</a></li>
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<li>GraphEngine() : <a class="el" href="classgridfire_1_1_graph_engine.html#a9f74786ff930ab72664b31f29d05a30c">gridfire::GraphEngine</a></li>
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</ul>
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<h3><a id="index_h" name="index_h"></a>- h -</h3><ul>
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<li>hash() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#af6c20e6d03a2d9f87632f71a90b88cb5">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a3209bb7c2a41deabaab059f6c671776f">gridfire::reaction::ReactionSet</a></li>
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</ul>
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<h3><a id="index_i" name="index_i"></a>- i -</h3><ul>
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<li>id() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a084c38181408ed5e6fa2a2dd4d0ec905">gridfire::reaction::Reaction</a></li>
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<li>initializeNetworkWithShortIgnition() : <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#abaa567001df0007b714f474febae408b">gridfire::solver::QSENetworkSolver</a></li>
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<li>involvesSpecies() : <a class="el" href="classgridfire_1_1_graph_engine.html#aa6202cee0c3c481eda77cc9a91bc126b">gridfire::GraphEngine</a></li>
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<li>is_reverse() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#aa67d05dfabf007c1acad34052d9a1dba">gridfire::reaction::Reaction</a></li>
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<li>isStiff() : <a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#a5b17b2831389829533385900ce19a37a">gridfire::approx8::Approx8Network</a>, <a class="el" href="classgridfire_1_1_network.html#ae93ad65deba79def4b77d420e7affa0b">gridfire::Network</a></li>
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</ul>
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<h3><a id="index_j" name="index_j"></a>- j -</h3><ul>
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<li>JacobianFunctor() : <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html#afd2a548ffb907b0fb1fa28993ea99f25">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html#ab8222646cd32670a046b6c74909bd83a">gridfire::solver::QSENetworkSolver::JacobianFunctor</a></li>
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</ul>
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<h3><a id="index_l" name="index_l"></a>- l -</h3><ul>
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<li>LogicalReaction() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a6965906ea33ebd0d615811219d9e9537">gridfire::reaction::LogicalReaction</a></li>
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<li>LogicalReactionSet() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ac650a2a2c83cfb618f11a924552e251d">gridfire::reaction::LogicalReactionSet</a></li>
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</ul>
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<h3><a id="index_m" name="index_m"></a>- m -</h3><ul>
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<li>mapCulledToFull() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a68695f056b660e91285b7e5a931612e1">gridfire::AdaptiveEngineView</a></li>
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<li>mapCulledToFullReactionIndex() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a91e742642d8a8d9ec0620779927e5101">gridfire::AdaptiveEngineView</a></li>
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<li>mapCulledToFullSpeciesIndex() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a256d14a333f9401039b826cc889761a8">gridfire::AdaptiveEngineView</a></li>
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<li>mapFullToCulled() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a3d9d8e862d1c2f0a8ba460c57f6a7f44">gridfire::AdaptiveEngineView</a></li>
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<li>MolarAbundance() : <a class="el" href="structgridfire_1_1_net_in.html#a47781e8d5503e3b4f12d669e2cbcfb65">gridfire::NetIn</a></li>
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</ul>
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<h3><a id="index_n" name="index_n"></a>- n -</h3><ul>
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<li>Network() : <a class="el" href="classgridfire_1_1_network.html#a20b631f2404bfdec2333f680a62abf55">gridfire::Network</a></li>
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<li>NetworkSolverStrategy() : <a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html#a01cbbec0eb5c3a60f50da38cdaf66505">gridfire::solver::NetworkSolverStrategy< EngineT ></a></li>
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<li>num_species() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a1d3c8ab6d55155f9a21ad80ed8b9ef97">gridfire::reaction::Reaction</a></li>
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</ul>
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<h3><a id="index_o" name="index_o"></a>- o -</h3><ul>
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<li>operator!=() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a2f1c115a99bc7c477a2e858ff18b1b51">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8">gridfire::reaction::ReactionSet</a></li>
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<li>operator()() : <a class="el" href="structgridfire_1_1approx8_1_1_jacobian.html#a548431915b5895082eb96ce66d5494fa">gridfire::approx8::Jacobian</a>, <a class="el" href="structgridfire_1_1approx8_1_1_o_d_e.html#a2e1eb1ce2aa7949c225d45ce4edf03d0">gridfire::approx8::ODE</a>, <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html#ad4fc0b406218aa2f567f5c61a4eda3c9">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html#a3a7542b6c6b4c86b6fe53f54d7232919">gridfire::solver::DirectNetworkSolver::RHSFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#a91c9c7c40c061dcfb6e57524e696676e">gridfire::solver::QSENetworkSolver::EigenFunctor< T ></a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html#a3668fae1e0f8e69ff3fd87275bf4a79d">gridfire::solver::QSENetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#ae0b6362d9c0a14e69c7a47233db6a86a">gridfire::solver::QSENetworkSolver::RHSFunctor</a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html#a48224b63a80690e4f0620f1312be5dd9">std::hash< gridfire::reaction::Reaction ></a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html#a32b976b3e3e4e0403c1295f9b467e921">std::hash< gridfire::reaction::ReactionSet ></a></li>
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<li>operator=() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aac890bf7fdf689890d765ff67489520a">gridfire::reaction::ReactionSet</a></li>
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<li>operator==() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ac426457cf0a54a15b206549422083bac">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4e572e823a80b905e7d002b612123135">gridfire::reaction::ReactionSet</a></li>
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|
<li>operator[]() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a00001bbc0f888b167da50ae9fc2a75af">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">gridfire::reaction::ReactionSet</a></li>
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</ul>
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<h3><a id="index_p" name="index_p"></a>- p -</h3><ul>
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<li>packSpeciesTypeIndexVectors() : <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a5d81ee5bfcfd5e77fe52201ba9e63719">gridfire::solver::QSENetworkSolver</a></li>
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|
<li>peName() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a78f42664cc957e266b6cf15fda09be97">gridfire::reaction::Reaction</a></li>
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|
<li>populateReactionIDMap() : <a class="el" href="classgridfire_1_1_graph_engine.html#a26602e1b3c610780a47b5a6511d6d567">gridfire::GraphEngine</a></li>
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<li>populateSpeciesToIndexMap() : <a class="el" href="classgridfire_1_1_graph_engine.html#a47202c43342b96480070874bffce1391">gridfire::GraphEngine</a></li>
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|
<li>product_species() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a01c67726efbaa2ff8e4d6f2c965f485c">gridfire::reaction::Reaction</a></li>
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<li>products() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a6e2ff61b9e8409f2a561663628b8ce02">gridfire::reaction::Reaction</a></li>
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</ul>
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<h3><a id="index_q" name="index_q"></a>- q -</h3><ul>
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<li>qValue() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#abda0b4e4313e6d4ba57acf37d5976fb8">gridfire::reaction::Reaction</a></li>
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</ul>
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<h3><a id="index_r" name="index_r"></a>- r -</h3><ul>
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<li>rateCoefficients() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a85968076e686e67763f4fdf4f72a892e">gridfire::reaction::Reaction</a></li>
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|
<li>reactant_species() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a855ea65e4b62fb0cddc550424a4bc923">gridfire::reaction::Reaction</a></li>
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|
<li>reactants() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a0b543e9b0bb4a21efe4b29780d9bdf5b">gridfire::reaction::Reaction</a></li>
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<li>Reaction() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">gridfire::reaction::Reaction</a></li>
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<li>ReactionSet() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">gridfire::reaction::ReactionSet</a></li>
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<li>recordADTape() : <a class="el" href="classgridfire_1_1_graph_engine.html#a95563f6bc86007d9ee053a0f1e15b889">gridfire::GraphEngine</a></li>
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<li>remove_reaction() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a1177193b1e46b4e5be630028883ab8dd">gridfire::reaction::ReactionSet</a></li>
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<li>reserveJacobianMatrix() : <a class="el" href="classgridfire_1_1_graph_engine.html#a5a5458ed01923124f2d7e1f04f32f138">gridfire::GraphEngine</a></li>
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<li>RHSFunctor() : <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html#aed201b52ea757069c17a49e9638b3d3c">gridfire::solver::DirectNetworkSolver::RHSFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#a5353d8e6f27b6c435084a167bc009e46">gridfire::solver::QSENetworkSolver::RHSFunctor</a></li>
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</ul>
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<h3><a id="index_s" name="index_s"></a>- s -</h3><ul>
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<li>setFormat() : <a class="el" href="classgridfire_1_1_network.html#a787c601f6e4bd06600bf946efbcc98d4">gridfire::Network</a></li>
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<li>setStiff() : <a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#aefed972081514c29cdaaa1efd857ad8d">gridfire::approx8::Approx8Network</a>, <a class="el" href="classgridfire_1_1_network.html#a84de2d691af06c4b62cfab5022b1e8fe">gridfire::Network</a></li>
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<li>shouldUpdateView() : <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a35f1f6ede393f15c8bb8862f3f1c3b07">gridfire::solver::QSENetworkSolver</a></li>
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<li>size() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#afa41050855b842c63db16c94d2e9b897">gridfire::reaction::LogicalReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a3bcdf2f98c19e9b95e03ad62d6ff7da7">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a6b07a81a3500e4e91d3bcd336b66e35d">gridfire::reaction::ReactionSet</a></li>
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<li>sourceLabel() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a410e2ab0784ad751f82bbe55be603db0">gridfire::reaction::Reaction</a></li>
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<li>sources() : <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#add094eda0e71126f8443698d7f3317f4">gridfire::reaction::LogicalReaction</a></li>
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<li>stoichiometry() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#aaf0c94db6536b4a9ac1ec08a5c8f01ac">gridfire::reaction::Reaction</a></li>
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<li>syncInternalMaps() : <a class="el" href="classgridfire_1_1_graph_engine.html#acdce8d87e23a2cd1504bc9472e538c0f">gridfire::GraphEngine</a></li>
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</ul>
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<h3><a id="index_u" name="index_u"></a>- u -</h3><ul>
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<li>update() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a44c4fb7568ddbb20a08f328c2fbf1fdf">gridfire::AdaptiveEngineView</a></li>
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</ul>
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<h3><a id="index_v" name="index_v"></a>- v -</h3><ul>
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<li>validateComposition() : <a class="el" href="classgridfire_1_1_graph_engine.html#aeeafeab40a5f4dbfae78bdc87e25e93f">gridfire::GraphEngine</a></li>
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<li>validateConservation() : <a class="el" href="classgridfire_1_1_graph_engine.html#acf4cfccea20f5cb31c9886bf233a28be">gridfire::GraphEngine</a></li>
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<li>validateState() : <a class="el" href="classgridfire_1_1_adaptive_engine_view.html#aedc0dedb51c81e03f253cc409a5d5c40">gridfire::AdaptiveEngineView</a></li>
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</ul>
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<h3><a id="index__7E" name="index__7E"></a>- ~ -</h3><ul>
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<li>~Engine() : <a class="el" href="classgridfire_1_1_engine.html#a2e7970bed2100699f226f4141d5db037">gridfire::Engine</a></li>
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<li>~EngineView() : <a class="el" href="classgridfire_1_1_engine_view.html#a994660f2d553f3a123512dc5eb421e74">gridfire::EngineView< EngineT ></a></li>
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<li>~Network() : <a class="el" href="classgridfire_1_1_network.html#ab8d83289b62dda9b4e02f25311f85b79">gridfire::Network</a></li>
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<li>~NetworkSolverStrategy() : <a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html#a1693dc93f63599c89587d729aca8e318">gridfire::solver::NetworkSolverStrategy< EngineT ></a></li>
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<li>~Reaction() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a">gridfire::reaction::Reaction</a></li>
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<li>~ReactionSet() : <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a64ca23fc5bdc41b868c3fbeb5aef6d98">gridfire::reaction::ReactionSet</a></li>
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</ul>
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