2acc037111
fix(poly): phi boundary values now coorespond to theta flux through polytrope surface
2025-04-25 10:32:06 -04:00
58840d82cd
refactor(poly): renamed core2 to core_hires and updated docs for polysolver
2025-04-23 11:00:32 -04:00
e56ab5644b
fix(poly): fixed -M bug in form
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MFEM MixedVectorWeakDivergenceIntegrator is actually already -M in our derivation, I have negated this so that Mform -> M directly
2025-04-23 09:13:30 -04:00
e4b56d7ce2
feat(poly): added memory safty flags
2025-04-21 10:18:44 -04:00
afdebb8636
refactor(operator): added updatePreconditioner method
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the preconditioner must be built once before the solver begins to iterater, by putting the logic for this in a dedicated method it becomes cleaner to call
2025-04-21 09:56:34 -04:00
9d164ef35b
feat(operator): smarter memory managment for all invertable matricies
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approxJacobiInvert now only preforms a reallocation if the result buffer is non null. If it is non null it will preform validation to confirm that the result buffer is the correct size to recive the inverted matrix
2025-04-21 09:55:21 -04:00
09fdff27bc
refactor(poly): improved const corectness
2025-04-21 09:22:21 -04:00
1af5bd00a2
refactor(thetaSeriesExpansion): marked parameters as const
2025-04-21 09:09:09 -04:00
513e90b7a0
refactor(solver): renamed setupOperator -> setOperatorEssentialTrueDofs to better reflect method job
2025-04-21 09:05:34 -04:00
30a6cb074f
docs(src): updated file headers
2025-04-21 08:56:45 -04:00
431a47b9c7
refactor(poly): updated header guards to pragma once
2025-04-21 08:54:59 -04:00
58cebc6167
feat(poly): preconditioner is now being computed
2025-04-21 08:35:29 -04:00
184f92faf1
refactor(polySolver): removed build_prec method
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building and managing has been offloaded to the operator
2025-04-21 08:07:17 -04:00
4a6b7aaa35
feat(polytrope-operator): finished computing the preconditioner
2025-04-21 08:04:49 -04:00
274f24034c
refactor(operator.h): removed get block methods
2025-04-21 07:45:17 -04:00
e7ad73c0f9
refactor(jacobiInvert): moved all jacobi inverting logic into dedicated function
2025-04-21 07:33:39 -04:00
0cc8e5bdfa
feat(polyInitialGuess): use numeric derivitive for phi initial guess
2025-04-18 11:18:55 -04:00
41460acacf
feat(debug-utils): added framework for shared debug util tools
2025-04-10 09:05:30 -04:00
08b68c22de
feat(poly): major work on preconditioner for block form of lane emden equation
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working on a "smart" schur compliment preconditioner for the block form of the lane emden equation. Currently this is stub and should not be considered usable
2025-04-09 15:17:55 -04:00
acf5367556
fix(poly): bug fixing in block form
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currently derivitive constraint is not working
2025-04-03 11:14:50 -04:00
dcc4381cbb
refactor(poly): removed unused includes
2025-04-02 15:00:28 -04:00
e3afe90f37
feat(poly): moved to a block form for poly
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essential dofs can be applied to both theta and phi (grad theta) if we move to a block form. I have done this derivation and made that change so that we can properly apply the central boundary condition to the slope
2025-04-02 14:57:37 -04:00
0880403850
fix(poly): have a much closer to working polytrope, still small divergence near core
2025-03-27 14:26:23 -04:00
b2ddbc41e7
fix(poly): increased default gamma and changed initial guess
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The default gamma value has been upped to 1e4 which is enough to strongly constrain the solution to have zero slope at the core region. Further, the initial guess has been changed from a series expansion of theta to a simple quadratic that is one at origin and zero at the polytrope radius. This is faster to evaluate and seems to work just as well.
2025-03-26 12:34:30 -04:00
7e99c2dd14
build(probe): added macros_dep for warning control
2025-03-26 11:41:34 -04:00
14bc8a49b3
Merge branch 'main' into feature/pointwisePolytrope
2025-03-26 11:38:07 -04:00
edd4c04c64
feat(composition): added mix method to combine compositions. Also overloaded the + operator to mix with an assumed fraction of 50/50
2025-03-26 08:07:11 -04:00
0e9a7df381
feat(composition): added ability to change composition modes
2025-03-25 13:01:22 -04:00
cb33f75e0c
feat(composition): added numberFrac methods and subset method
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Composition can now be placed in either number fraction or mass fraction mode and can (after finalization) convert between them. Subsets of compositions can also be made. Normalization has also been added to finalize. Tests have been added
2025-03-25 12:49:37 -04:00
d64202d6c0
docs(composition): updated mass fracs in docs to more realistic values
2025-03-24 13:20:24 -04:00
170bcb085d
build(probe): added probe dependencies to probe_dep
2025-03-24 12:59:43 -04:00
6aa3f90c98
build(composition): added composition module to build
2025-03-24 12:58:49 -04:00
cd022a1f9a
feat(composition): added composition class
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in order to get composition in a standardized way anywhere in the code we now have a composition class
2025-03-24 12:58:30 -04:00
3c3d714702
feat(composition): added composition module stub
2025-03-24 10:41:13 -04:00
b88606815a
refactor(opatIO): removed old opatIO code from 4DSSE
2025-03-24 04:59:01 -04:00
ff87585d71
build(opatIO): broke opatIO out into a seperate module
2025-03-24 04:57:18 -04:00
f6f35996cc
fix(opat): added min tolerance for epsilon in case where there are shared indeices
2025-03-22 14:26:08 -04:00
528d2f632b
fix(network): fixed missing negative in jacobian energy accounting
2025-03-21 14:46:22 -04:00
59d4c290ba
fix(network): added missing negative sign in energy calculation
2025-03-21 14:44:35 -04:00
3109c198cf
refactor(network): removed unused phoenix dependency and defauled stiff=false to use explicit solver
2025-03-21 14:35:18 -04:00
7c40db4b09
feat(approx8-network-integrated): added network handleing semantics and incorporated the approx8 network into them
2025-03-21 14:03:18 -04:00
Aaron Dotter
c58bd50f01
refactor(network) Added header file
2025-03-21 12:08:40 -04:00
6876b87947
feat(network): began incoporating network
2025-03-21 10:39:53 -04:00
f042be6b02
Merge pull request #28 from aarondotter/main
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adding a nuclear reaction network to feature/nuclearNetwork
2025-03-21 07:17:08 -04:00
Aaron Dotter
03c7d428a7
adding a nuclear reaction network
2025-03-20 15:22:04 -04:00
ed0e079150
docs(src): added documentation to all changes related to the resource manager
2025-03-20 14:37:15 -04:00
ecbdba5216
refactor(opatIO-and-meshIO): removed unused header file includes
2025-03-20 14:30:40 -04:00
cb5ac274dc
build(build): updated build system to be compatible with resource manager
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The build system now passes compiler directives based on the mode being build. By default data is stored in the source root (and this is encoded into the compiled binary). However, if building in user mode then data is assumed to be at the meson install prefix data directory
2025-03-20 14:29:43 -04:00
18f3f6689d
feat(config): added ability to get all keys and check if a key exists in the given config file
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also added the ability to get a config value without specifying a default (this is only avalible to freind classes)
2025-03-20 14:27:57 -04:00
08075f5108
feat(resource-manager): added working singleton resource manager
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all external data should now be handled through the resource manager. This will take care of location on disk as well as ownership
2025-03-20 14:26:44 -04:00
