docs(docs): rebuilt for version v0.7.1_rc2

This commit is contained in:
2025-11-28 09:46:00 -05:00
parent 033c5a083d
commit a472dc5214
2480 changed files with 231104 additions and 76191 deletions

View File

@@ -0,0 +1,303 @@
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
"http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
<!-- Generated by graphviz version 2.43.0 (0)
-->
<!-- Title: gridfire::reaction::LogicalReaclibReaction Pages: 1 -->
<!--zoomable 237 -->
<svg id="main" version="1.1" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" xml:space="preserve" onload="init(evt)">
<style type="text/css"><![CDATA[
.node, .edge {opacity: 0.7;}
.node.selected, .edge.selected {opacity: 1;}
.edge:hover path { stroke: red; }
.edge:hover polygon { stroke: red; fill: red; }
]]></style>
<defs>
<circle id="rim" cx="0" cy="0" r="7"/>
<circle id="rim2" cx="0" cy="0" r="3.5"/>
<g id="zoomPlus">
<use xlink:href="#rim" fill="#404040"><set attributeName="fill" to="#808080" begin="zoomplus.mouseover" end="zoomplus.mouseout"/></use>
<path d="M-4,0h8M0,-4v8" fill="none" stroke="white" stroke-width="1.5" pointer-events="none"/>
</g>
<g id="zoomMin">
<use xlink:href="#rim" fill="#404040"><set attributeName="fill" to="#808080" begin="zoomminus.mouseover" end="zoomminus.mouseout"/></use>
<path d="M-4,0h8" fill="none" stroke="white" stroke-width="1.5" pointer-events="none"/>
</g>
<g id="arrowUp" transform="translate(30 24)">
<use xlink:href="#rim"/>
<path pointer-events="none" fill="none" stroke="white" stroke-width="1.5" d="M0,-3.0v7 M-2.5,-0.5L0,-3.0L2.5,-0.5"/>
</g>
<g id="arrowRight" transform="rotate(90) translate(36 -43)">
<use xlink:href="#rim"/>
<path pointer-events="none" fill="none" stroke="white" stroke-width="1.5" d="M0,-3.0v7 M-2.5,-0.5L0,-3.0L2.5,-0.5"/>
</g>
<g id="arrowDown" transform="rotate(180) translate(-30 -48)">
<use xlink:href="#rim"/>
<path pointer-events="none" fill="none" stroke="white" stroke-width="1.5" d="M0,-3.0v7 M-2.5,-0.5L0,-3.0L2.5,-0.5"/>
</g>
<g id="arrowLeft" transform="rotate(270) translate(-36 17)">
<use xlink:href="#rim"/>
<path pointer-events="none" fill="none" stroke="white" stroke-width="1.5" d="M0,-3.0v7 M-2.5,-0.5L0,-3.0L2.5,-0.5"/>
</g>
<g id="resetDef">
<use xlink:href="#rim2" fill="#404040"><set attributeName="fill" to="#808080" begin="reset.mouseover" end="reset.mouseout"/></use>
</g>
</defs>
<script type="application/ecmascript">
var viewWidth = 826;
var viewHeight = 237;
var sectionId = 'dynsection-1';
</script>
<script type="application/ecmascript" xlink:href="svg.min.js"/>
<svg id="graph" class="graph">
<g id="viewport">
<title>gridfire::reaction::LogicalReaclibReaction</title>
<!-- Node1 -->
<g id="Node000001" class="node">
<title>Node1</title>
<g id="a_Node000001"><a xlink:title="Represents a &quot;logical&quot; reaction that aggregates rates from multiple sources.">
<polygon fill="#999999" stroke="#666666" points="818,-88.5 682,-88.5 682,-58.5 818,-58.5 818,-88.5"/>
<text text-anchor="start" x="690" y="-76.5" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::reaction</text>
<text text-anchor="middle" x="750" y="-65.5" font-family="Helvetica,sans-Serif" font-size="10.00">::LogicalReaclibReaction</text>
</a>
</g>
</g>
<!-- Node2 -->
<g id="Node000002" class="node">
<title>Node2</title>
<g id="a_Node000002"><a xlink:href="classgridfire_1_1reaction_1_1ReaclibReaction.html" target="_top" xlink:title=" ">
<polygon fill="white" stroke="#666666" points="569,-131.5 468,-131.5 468,-101.5 569,-101.5 569,-131.5"/>
<text text-anchor="start" x="476" y="-119.5" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::reaction</text>
<text text-anchor="middle" x="518.5" y="-108.5" font-family="Helvetica,sans-Serif" font-size="10.00">::ReaclibReaction</text>
</a>
</g>
</g>
<!-- Node2&#45;&gt;Node1 -->
<g id="edge1_Node000001_Node000002" class="edge">
<title>Node2&#45;&gt;Node1</title>
<g id="a_edge1_Node000001_Node000002"><a xlink:title=" ">
<path fill="none" stroke="#63b8ff" d="M578.96,-105.36C610.42,-99.47 649.17,-92.21 681.72,-86.11"/>
<polygon fill="#63b8ff" stroke="#63b8ff" points="578.2,-101.94 569.02,-107.22 579.49,-108.82 578.2,-101.94"/>
</a>
</g>
</g>
<!-- Node3 -->
<g id="Node000003" class="node">
<title>Node3</title>
<g id="a_Node000003"><a xlink:href="classgridfire_1_1reaction_1_1Reaction.html" target="_top" xlink:title="Represents a single nuclear reaction from a specific data source.">
<polygon fill="white" stroke="#666666" points="289,-228.5 192,-228.5 192,-198.5 289,-198.5 289,-228.5"/>
<text text-anchor="start" x="200" y="-216.5" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::reaction</text>
<text text-anchor="middle" x="240.5" y="-205.5" font-family="Helvetica,sans-Serif" font-size="10.00">::Reaction</text>
</a>
</g>
</g>
<!-- Node3&#45;&gt;Node2 -->
<g id="edge2_Node000002_Node000003" class="edge">
<title>Node3&#45;&gt;Node2</title>
<g id="a_edge2_Node000002_Node000003"><a xlink:title=" ">
<path fill="none" stroke="#63b8ff" d="M299.51,-211.49C337.62,-208.44 387.84,-201.06 429,-183.5 457.89,-171.17 485.87,-147.38 502.39,-131.72"/>
<polygon fill="#63b8ff" stroke="#63b8ff" points="298.82,-208.03 289.1,-212.24 299.33,-215.01 298.82,-208.03"/>
</a>
</g>
</g>
<!-- Node4 -->
<g id="Node000004" class="node">
<title>Node4</title>
<g id="a_Node000004"><a xlink:title=" ">
<polygon fill="white" stroke="#666666" points="273,-113 208,-113 208,-94 273,-94 273,-113"/>
<text text-anchor="middle" x="240.5" y="-101" font-family="Helvetica,sans-Serif" font-size="10.00">std::string</text>
</a>
</g>
</g>
<!-- Node4&#45;&gt;Node2 -->
<g id="edge3_Node000002_Node000004" class="edge">
<title>Node4&#45;&gt;Node2</title>
<g id="a_edge3_Node000002_Node000004"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M283.2,-105.46C332.68,-107.79 415.12,-111.68 467.85,-114.16"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="283.31,-101.97 273.16,-104.99 282.98,-108.96 283.31,-101.97"/>
</a>
</g>
<text text-anchor="middle" x="381" y="-136.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_id</text>
<text text-anchor="middle" x="381" y="-125.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey">m_peName</text>
<text text-anchor="middle" x="381" y="-114.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey">m_sourceLabel</text>
</g>
<!-- Node9 -->
<g id="Node000009" class="node">
<title>Node9</title>
<g id="a_Node000009"><a xlink:title=" ">
<polygon fill="white" stroke="#666666" points="588.5,-83 448.5,-83 448.5,-64 588.5,-64 588.5,-83"/>
<text text-anchor="middle" x="518.5" y="-71" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::string &gt;</text>
</a>
</g>
</g>
<!-- Node4&#45;&gt;Node9 -->
<g id="edge9_Node000009_Node000004" class="edge">
<title>Node4&#45;&gt;Node9</title>
<g id="a_edge9_Node000009_Node000004"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M283.59,-98.29C299.11,-96.41 316.85,-94.3 333,-92.5 371.08,-88.25 413.63,-83.85 448.26,-80.35"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="282.75,-94.86 273.24,-99.55 283.59,-101.81 282.75,-94.86"/>
</a>
</g>
<text text-anchor="middle" x="381" y="-95.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
</g>
<!-- Node5 -->
<g id="Node000005" class="node">
<title>Node5</title>
<g id="a_Node000005"><a xlink:title=" ">
<polygon fill="white" stroke="#666666" points="104,-118.5 0,-118.5 0,-88.5 104,-88.5 104,-118.5"/>
<text text-anchor="start" x="8" y="-106.5" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string&lt;</text>
<text text-anchor="middle" x="52" y="-95.5" font-family="Helvetica,sans-Serif" font-size="10.00"> Char &gt;</text>
</a>
</g>
</g>
<!-- Node5&#45;&gt;Node4 -->
<g id="edge4_Node000004_Node000005" class="edge">
<title>Node5&#45;&gt;Node4</title>
<g id="a_edge4_Node000004_Node000005"><a xlink:title=" ">
<path fill="none" stroke="#63b8ff" d="M114.79,-103.5C145.94,-103.5 182.39,-103.5 207.81,-103.5"/>
<polygon fill="#63b8ff" stroke="#63b8ff" points="114.46,-100 104.46,-103.5 114.46,-107 114.46,-100"/>
</a>
</g>
</g>
<!-- Node6 -->
<g id="Node000006" class="node">
<title>Node6</title>
<g id="a_Node000006"><a xlink:title=" ">
<polygon fill="white" stroke="#666666" points="315,-180 166,-180 166,-139 315,-139 315,-180"/>
<text text-anchor="start" x="174" y="-168" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
<text text-anchor="start" x="174" y="-157" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
<text text-anchor="middle" x="240.5" y="-146" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
</a>
</g>
</g>
<!-- Node6&#45;&gt;Node2 -->
<g id="edge5_Node000002_Node000006" class="edge">
<title>Node6&#45;&gt;Node2</title>
<g id="a_edge5_Node000002_Node000006"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M325.49,-158.29C358.06,-156.62 395.51,-153.22 429,-146.5 446.18,-143.05 464.61,-137.18 480.19,-131.53"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="324.92,-154.81 315.1,-158.77 325.25,-161.8 324.92,-154.81"/>
</a>
</g>
<text text-anchor="middle" x="381" y="-171.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_products</text>
<text text-anchor="middle" x="381" y="-160.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey">m_reactants</text>
</g>
<!-- Node7 -->
<g id="Node000007" class="node">
<title>Node7</title>
<g id="a_Node000007"><a xlink:title=" ">
<polygon fill="white" stroke="#666666" points="79,-169 25,-169 25,-150 79,-150 79,-169"/>
<text text-anchor="middle" x="52" y="-157" font-family="Helvetica,sans-Serif" font-size="10.00">Species</text>
</a>
</g>
</g>
<!-- Node7&#45;&gt;Node6 -->
<g id="edge6_Node000006_Node000007" class="edge">
<title>Node7&#45;&gt;Node6</title>
<g id="a_edge6_Node000006_Node000007"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M89.43,-159.5C111.17,-159.5 139.58,-159.5 165.82,-159.5"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="89.33,-156 79.33,-159.5 89.33,-163 89.33,-156"/>
</a>
</g>
<text text-anchor="middle" x="135" y="-162.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
</g>
<!-- Node8 -->
<g id="Node000008" class="node">
<title>Node8</title>
<g id="a_Node000008"><a xlink:href="structgridfire_1_1reaction_1_1RateCoefficientSet.html" target="_top" xlink:title="Holds the seven coefficients for the REACLIB rate equation.">
<polygon fill="white" stroke="#666666" points="297,-42.5 184,-42.5 184,-12.5 297,-12.5 297,-42.5"/>
<text text-anchor="start" x="192" y="-30.5" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::reaction</text>
<text text-anchor="middle" x="240.5" y="-19.5" font-family="Helvetica,sans-Serif" font-size="10.00">::RateCoefficientSet</text>
</a>
</g>
</g>
<!-- Node8&#45;&gt;Node2 -->
<g id="edge7_Node000002_Node000008" class="edge">
<title>Node8&#45;&gt;Node2</title>
<g id="a_edge7_Node000002_Node000008"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M307.37,-29.24C345.6,-33.03 393.13,-42.73 429,-66.5 440.72,-74.26 435.78,-84.03 447,-92.5 453.19,-97.17 460.35,-100.98 467.69,-104.06"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="307.63,-25.75 297.36,-28.36 307.01,-32.72 307.63,-25.75"/>
</a>
</g>
<text text-anchor="middle" x="381" y="-69.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_rateCoefficients</text>
</g>
<!-- Node10 -->
<g id="Node000010" class="node">
<title>Node10</title>
<g id="a_Node000010"><a xlink:title=" ">
<polygon fill="white" stroke="#666666" points="590,-41 447,-41 447,0 590,0 590,-41"/>
<text text-anchor="start" x="455" y="-29" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; gridfire</text>
<text text-anchor="start" x="455" y="-18" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::RateCoefficient</text>
<text text-anchor="middle" x="518.5" y="-7" font-family="Helvetica,sans-Serif" font-size="10.00">Set &gt;</text>
</a>
</g>
</g>
<!-- Node8&#45;&gt;Node10 -->
<g id="edge11_Node000010_Node000008" class="edge">
<title>Node8&#45;&gt;Node10</title>
<g id="a_edge11_Node000010_Node000008"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M307.42,-14.57C315.99,-13.31 324.69,-12.22 333,-11.5 375.51,-7.81 386.39,-9.34 429,-11.5 434.71,-11.79 440.61,-12.18 446.54,-12.65"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="306.77,-11.13 297.43,-16.14 307.85,-18.05 306.77,-11.13"/>
</a>
</g>
<text text-anchor="middle" x="381" y="-14.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
</g>
<!-- Node9&#45;&gt;Node1 -->
<g id="edge8_Node000001_Node000009" class="edge">
<title>Node9&#45;&gt;Node1</title>
<g id="a_edge8_Node000001_Node000009"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M598.89,-73.5C625.96,-73.5 655.94,-73.5 681.94,-73.5"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="598.67,-70 588.67,-73.5 598.67,-77 598.67,-70"/>
</a>
</g>
<text text-anchor="middle" x="636" y="-76.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_sources</text>
</g>
<!-- Node10&#45;&gt;Node1 -->
<g id="edge10_Node000001_Node000010" class="edge">
<title>Node10&#45;&gt;Node1</title>
<g id="a_edge10_Node000001_Node000010"><a xlink:title=" ">
<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M600.2,-39.14C627.63,-45.47 657.92,-52.47 683.97,-58.48"/>
<polygon fill="#9a32cd" stroke="#9a32cd" points="600.76,-35.67 590.23,-36.83 599.19,-42.49 600.76,-35.67"/>
</a>
</g>
<text text-anchor="middle" x="636" y="-56.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_rates</text>
</g>
</g>
</svg>
<g id="navigator" transform="translate(0 0)" fill="#404254">
<rect fill="#f2f5e9" fill-opacity="0.5" stroke="#606060" stroke-width=".5" x="0" y="0" width="60" height="60"/>
<use id="zoomplus" xlink:href="#zoomPlus" x="17" y="9" onmousedown="handleZoom(evt,'in')"/>
<use id="zoomminus" xlink:href="#zoomMin" x="42" y="9" onmousedown="handleZoom(evt,'out')"/>
<use id="reset" xlink:href="#resetDef" x="30" y="36" onmousedown="handleReset()"/>
<use id="arrowup" xlink:href="#arrowUp" x="0" y="0" onmousedown="handlePan(0,-1)"/>
<use id="arrowright" xlink:href="#arrowRight" x="0" y="0" onmousedown="handlePan(1,0)"/>
<use id="arrowdown" xlink:href="#arrowDown" x="0" y="0" onmousedown="handlePan(0,1)"/>
<use id="arrowleft" xlink:href="#arrowLeft" x="0" y="0" onmousedown="handlePan(-1,0)"/>
</g>
<svg viewBox="0 0 15 15" width="100%" height="30px" preserveAspectRatio="xMaxYMin meet">
<g id="arrow_out" transform="scale(0.3 0.3)">
<a xlink:href="classgridfire_1_1reaction_1_1LogicalReaclibReaction__coll__graph_org.svg" target="_base">
<rect id="button" ry="5" rx="5" y="6" x="6" height="38" width="38"
fill="#f2f5e9" fill-opacity="0.5" stroke="#606060" stroke-width="1.0"/>
<path id="arrow"
d="M 11.500037,31.436501 C 11.940474,20.09759 22.043105,11.32322 32.158766,21.979434 L 37.068811,17.246167 C 37.068811,17.246167 37.088388,32 37.088388,32 L 22.160133,31.978069 C 22.160133,31.978069 26.997745,27.140456 26.997745,27.140456 C 18.528582,18.264221 13.291696,25.230495 11.500037,31.436501 z"
style="fill:#404040;"/>
</a>
</g>
</svg>
<style type='text/css'>
<![CDATA[
[data-mouse-over-selected='false'] { opacity: 0.7; }
[data-mouse-over-selected='true'] { opacity: 1.0; }
]]>
</style>
<script type="application/ecmascript"><![CDATA[
document.addEventListener('DOMContentLoaded', (event) => {
highlightEdges();
highlightAdjacentNodes();
});
]]></script>
</svg>

After

Width:  |  Height:  |  Size: 15 KiB