docs(docs): rebuilt for version v0.7.1_rc2

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<div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
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<div id="projectbrief">General Purpose Nuclear Network</div>
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<div class="headertitle"><div class="title">gridfire::engine::DynamicEngine Member List</div></div>
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<p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a>, including all inherited members.</p>
<table class="directory">
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#ada6a1295a92c2aede841672ecae0cede">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#aa57fa5e58b98a03fba31bcddda8001d4">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html#a764fc091c72c12c8529105d7c96badb2">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a41877719ae5e8de53c1692c7cf9bfbfc">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a53276f09346b531f8676db355e1219eb">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a15d53dac8b622a3b7d0f928a3995dbde">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a51d55a21be28e372021b2b8e5ecdc551">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a5e2c45a3e415b53e41def8f743f93464">generateStoichiometryMatrix</a>()=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#ac5a0def6b6af0bd93bf9057c25f048ff">getDepth</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a26b59a4c7622bf820c0eeec6a7522aa8">getNetworkReactions</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">getNetworkSpecies</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a24103027a38e02d4342161164554d332">getScreeningModel</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#aefc5d0f7842b27a108ba1e4ca346e9a0">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#ac0f40017603e8e6887b75dc7360d7c5e">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a8aebefad50c1aa34207e118e92d7ccf0">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#aef6ed91d922c0b1733fd7835e99d0efe">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a79423b9f67b4cac702547b4f1d8bd14c">isStale</a>(const NetIn &amp;netIn)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#aa9d55b81c1963113aad86aa60c19676f">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a70e270bb50910c0055a75575c1ef1e95">primeEngine</a>(const NetIn &amp;netIn)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#ab321170954bffc53b1bedaf54f6976be">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a50e76977d0dc3cc23d52b51842d35003">setScreeningModel</a>(screening::ScreeningType model)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a8dd85442ec54f20d91743c72364e36ff">update</a>(const NetIn &amp;netIn)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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