docs(rebuilt-docs): rebuild docs for v0.7.6rc4.0

This commit is contained in:
2026-04-20 12:45:31 -04:00
parent cf26983fe2
commit 7d611c56ad
2879 changed files with 341584 additions and 181414 deletions

View File

@@ -1,166 +1,159 @@
<map id="src/python/engine/bindings.cpp" name="src/python/engine/bindings.cpp">
<area shape="rect" id="Node000001" title=" " alt="" coords="1869,5,2093,31"/>
<area shape="rect" id="Node000002" title=" " alt="" coords="1645,152,1804,177"/>
<area shape="poly" id="edge1_Node000001_Node000002" title=" " alt="" coords="1869,22,1782,27,1693,36,1618,54,1591,66,1572,80,1565,92,1565,101,1570,111,1580,119,1611,134,1649,146,1647,151,1609,139,1577,124,1566,114,1560,103,1560,90,1568,77,1588,61,1617,49,1693,31,1782,21,1869,17"/>
<area shape="rect" id="Node000003" title=" " alt="" coords="1582,79,1697,104"/>
<area shape="poly" id="edge2_Node000001_Node000003" title=" " alt="" coords="1926,33,1708,78,1707,73,1925,28"/>
<area shape="rect" id="Node000004" title=" " alt="" coords="1721,79,1870,104"/>
<area shape="poly" id="edge3_Node000001_Node000004" title=" " alt="" coords="1952,33,1839,76,1837,71,1950,28"/>
<area shape="rect" id="Node000005" href="$engine_2bindings_8h.html" title=" " alt="" coords="1895,79,1984,104"/>
<area shape="poly" id="edge4_Node000001_Node000005" title=" " alt="" coords="1976,32,1955,68,1951,65,1972,30"/>
<area shape="rect" id="Node000006" href="$engine_8h.html" title="Core header for the GridFire reaction network engine module." alt="" coords="2247,152,2423,177"/>
<area shape="poly" id="edge6_Node000001_Node000006" title=" " alt="" coords="1995,29,2039,65,2099,102,2173,129,2247,147,2246,152,2172,134,2097,106,2036,69,1992,33"/>
<area shape="rect" id="Node000067" href="$exceptions_8h.html" title=" " alt="" coords="560,313,703,353"/>
<area shape="poly" id="edge92_Node000001_Node000067" title=" " alt="" coords="1990,30,2003,65,2004,86,1998,105,1979,129,1960,145,1940,155,1919,162,1872,169,1816,180,1661,217,1502,247,1343,272,1189,292,915,318,717,331,716,326,914,313,1189,286,1342,267,1501,242,1660,211,1815,175,1871,164,1918,157,1938,150,1957,140,1975,125,1993,103,1999,85,1998,66,1985,32"/>
<area shape="rect" id="Node000078" title=" " alt="" coords="2110,79,2251,104"/>
<area shape="poly" id="edge109_Node000001_Node000078" title=" " alt="" coords="2014,28,2136,71,2134,76,2012,33"/>
<area shape="rect" id="Node000079" href="$py__engine_8h.html" title=" " alt="" coords="3653,79,3829,104"/>
<area shape="poly" id="edge110_Node000001_Node000079" title=" " alt="" coords="2093,21,3639,83,3639,89,2093,26"/>
<area shape="poly" id="edge5_Node000005_Node000002" title=" " alt="" coords="1906,107,1773,150,1772,145,1904,101"/>
<area shape="rect" id="Node000007" href="$engine__abstract_8h.html" title="Abstract interfaces for reaction network engines in GridFire." alt="" coords="2071,401,2235,441"/>
<area shape="poly" id="edge7_Node000006_Node000007" title=" " alt="" coords="2331,179,2276,267,2179,392,2175,389,2272,264,2326,176"/>
<area shape="rect" id="Node000038" href="$engine__graph_8h.html" title=" " alt="" coords="2343,313,2507,353"/>
<area shape="poly" id="edge41_Node000006_Node000038" title=" " alt="" coords="2344,176,2410,300,2406,302,2339,179"/>
<area shape="rect" id="Node000051" href="$engine__views_8h.html" title=" " alt="" coords="3069,225,3228,265"/>
<area shape="poly" id="edge75_Node000006_Node000051" title=" " alt="" coords="2424,172,3056,232,3055,238,2423,177"/>
<area shape="rect" id="Node000062" href="$engine__procedures_8h.html" title=" " alt="" coords="2627,225,2819,265"/>
<area shape="poly" id="edge85_Node000006_Node000062" title=" " alt="" coords="2392,175,2618,220,2617,225,2391,180"/>
<area shape="rect" id="Node000064" href="$engine__types_8h.html" title=" " alt="" coords="2060,225,2216,265"/>
<area shape="poly" id="edge87_Node000006_Node000064" title=" " alt="" coords="2308,180,2199,223,2197,218,2306,175"/>
<area shape="rect" id="Node000065" href="$dynamic__engine__diagnostics_8h.html" title="Diagnostics utilities for DynamicEngine instances." alt="" coords="1666,313,1893,353"/>
<area shape="poly" id="edge88_Node000006_Node000065" title=" " alt="" coords="2329,179,2289,223,2261,248,2228,268,2170,286,2089,302,1907,324,1906,319,2088,297,2169,281,2226,263,2258,244,2285,220,2325,176"/>
<area shape="rect" id="Node000008" href="$reaction_8h.html" title="Defines classes for representing and managing nuclear reactions." alt="" coords="2601,665,2795,691"/>
<area shape="poly" id="edge8_Node000007_Node000008" title=" " alt="" coords="2174,439,2221,481,2281,527,2359,577,2444,615,2531,642,2614,660,2613,665,2530,647,2442,620,2357,582,2278,532,2218,486,2170,443"/>
<area shape="rect" id="Node000014" title=" " alt="" coords="1939,746,2063,771"/>
<area shape="poly" id="edge38_Node000007_Node000014" title=" " alt="" coords="2071,427,2009,433,1940,444,1868,463,1800,492,1769,509,1747,526,1729,547,1714,578,1709,595,1708,611,1716,640,1737,665,1767,687,1805,706,1845,721,1926,742,1924,747,1844,726,1802,710,1765,692,1733,669,1712,643,1702,612,1703,595,1709,576,1725,544,1743,522,1766,505,1798,487,1866,458,1938,439,2008,428,2070,422"/>
<area shape="rect" id="Node000015" title=" " alt="" coords="2667,746,2729,771"/>
<area shape="poly" id="edge37_Node000007_Node000015" title=" " alt="" coords="2165,440,2190,482,2225,528,2276,572,2332,612,2392,646,2452,675,2566,718,2654,744,2652,749,2564,724,2450,680,2389,651,2329,616,2272,577,2221,531,2185,485,2160,443"/>
<area shape="rect" id="Node000019" href="$types_8h.html" title=" " alt="" coords="2291,497,2451,522"/>
<area shape="poly" id="edge16_Node000007_Node000019" title=" " alt="" coords="2202,439,2330,489,2329,494,2200,444"/>
<area shape="rect" id="Node000020" href="$screening__abstract_8h.html" title=" " alt="" coords="2980,577,3141,617"/>
<area shape="poly" id="edge19_Node000007_Node000020" title=" " alt="" coords="2236,434,2345,457,2464,487,2518,508,2572,527,2967,581,2966,586,2571,532,2516,513,2463,492,2344,462,2235,440"/>
<area shape="rect" id="Node000021" href="$screening__types_8h.html" title=" " alt="" coords="2910,489,3054,529"/>
<area shape="poly" id="edge24_Node000007_Node000021" title=" " alt="" coords="2235,427,2507,451,2846,487,2897,493,2896,498,2846,492,2506,457,2235,432"/>
<area shape="rect" id="Node000023" href="$reporting_8h.html" title=" " alt="" coords="1160,489,1316,529"/>
<area shape="poly" id="edge27_Node000007_Node000023" title=" " alt="" coords="2071,433,1430,492,1330,502,1330,496,1430,487,2070,427"/>
<area shape="rect" id="Node000028" href="$building_8h.html" title="Defines types related to building reaction networks in the GridFire engine." alt="" coords="2679,489,2835,529"/>
<area shape="poly" id="edge30_Node000007_Node000028" title=" " alt="" coords="2235,432,2665,492,2665,498,2234,437"/>
<area shape="rect" id="Node000030" href="$jacobian_8h.html" title="Wrapper for handling the network Jacobian matrix in GridFire. Currently uses Eigen&#39;s SparseMatrix." alt="" coords="1908,489,2064,529"/>
<area shape="poly" id="edge31_Node000007_Node000030" title=" " alt="" coords="2117,444,2036,486,2033,481,2115,439"/>
<area shape="rect" id="Node000031" title=" " alt="" coords="1835,577,2014,617"/>
<area shape="poly" id="edge36_Node000007_Node000031" title=" " alt="" coords="2071,430,1997,437,1920,449,1854,467,1829,478,1813,491,1807,502,1806,512,1817,532,1840,552,1868,569,1866,574,1836,556,1813,536,1801,513,1802,500,1809,488,1827,473,1852,462,1919,443,1996,431,2070,424"/>
<area shape="rect" id="Node000036" title=" " alt="" coords="1824,497,1884,522"/>
<area shape="poly" id="edge39_Node000007_Node000036" title=" " alt="" coords="2071,443,1986,464,1896,492,1891,494,1889,489,1894,487,1985,459,2070,438"/>
<area shape="rect" id="Node000037" title=" " alt="" coords="3217,585,3299,610"/>
<area shape="poly" id="edge40_Node000007_Node000037" title=" " alt="" coords="2235,431,2377,454,2537,487,2602,508,2667,527,2802,548,2909,556,3016,561,3153,575,3204,583,3203,588,3152,580,3016,566,2908,561,2801,553,2665,532,2600,513,2536,492,2376,459,2235,436"/>
<area shape="rect" id="Node000009" title=" " alt="" coords="2343,746,2410,771"/>
<area shape="poly" id="edge9_Node000008_Node000009" title=" " alt="" coords="2652,693,2424,749,2423,743,2651,688"/>
<area shape="rect" id="Node000011" title=" " alt="" coords="3324,746,3552,771"/>
<area shape="poly" id="edge10_Node000008_Node000011" title=" " alt="" coords="2796,687,3317,742,3316,747,2795,692"/>
<area shape="rect" id="Node000012" title=" " alt="" coords="3649,746,3833,771"/>
<area shape="poly" id="edge11_Node000008_Node000012" title=" " alt="" coords="2796,682,3135,704,3564,736,3635,743,3634,748,3563,741,3135,709,2795,688"/>
<area shape="poly" id="edge12_Node000008_Node000014" title=" " alt="" coords="2601,693,2077,752,2076,746,2600,688"/>
<area shape="poly" id="edge13_Node000008_Node000015" title=" " alt="" coords="2701,691,2701,732,2695,732,2695,691"/>
<area shape="rect" id="Node000017" title=" " alt="" coords="2895,746,3027,771"/>
<area shape="poly" id="edge14_Node000008_Node000017" title=" " alt="" coords="2737,688,2910,740,2909,745,2735,693"/>
<area shape="rect" id="Node000018" title=" " alt="" coords="1521,739,1673,779"/>
<area shape="poly" id="edge15_Node000008_Node000018" title=" " alt="" coords="2600,689,1687,754,1686,748,2600,684"/>
<area shape="poly" id="edge18_Node000019_Node000017" title=" " alt="" coords="2413,520,2587,575,2698,616,2808,663,2877,700,2934,736,2932,741,2875,705,2806,668,2696,621,2586,580,2411,525"/>
<area shape="poly" id="edge17_Node000019_Node000018" title=" " alt="" coords="2336,525,1670,737,1668,732,2335,520"/>
<area shape="poly" id="edge20_Node000020_Node000008" title=" " alt="" coords="2980,619,2765,665,2764,660,2979,613"/>
<area shape="poly" id="edge21_Node000020_Node000011" title=" " alt="" coords="3106,615,3400,738,3397,743,3104,620"/>
<area shape="poly" id="edge23_Node000020_Node000015" title=" " alt="" coords="3019,620,2737,743,2735,738,3017,615"/>
<area shape="poly" id="edge22_Node000020_Node000017" title=" " alt="" coords="3051,619,2978,736,2973,733,3047,616"/>
<area shape="poly" id="edge25_Node000021_Node000020" title=" " alt="" coords="3001,528,3036,565,3032,569,2997,531"/>
<area shape="rect" id="Node000022" title=" " alt="" coords="2827,585,2905,610"/>
<area shape="poly" id="edge26_Node000021_Node000022" title=" " alt="" coords="2958,532,2894,579,2891,574,2955,527"/>
<area shape="poly" id="edge29_Node000023_Node000018" title=" " alt="" coords="1245,529,1256,564,1275,607,1302,651,1337,689,1376,713,1420,731,1464,742,1507,750,1506,755,1463,748,1418,736,1374,718,1334,693,1297,654,1270,609,1251,565,1240,531"/>
<area shape="rect" id="Node000025" title=" " alt="" coords="1042,585,1101,610"/>
<area shape="poly" id="edge28_Node000023_Node000025" title=" " alt="" coords="1203,532,1107,581,1104,576,1200,527"/>
<area shape="poly" id="edge32_Node000030_Node000011" title=" " alt="" coords="2065,521,3358,741,3357,746,2064,527"/>
<area shape="poly" id="edge35_Node000030_Node000014" title=" " alt="" coords="2004,528,2018,551,2029,577,2034,620,2031,663,2023,702,2013,734,2008,732,2017,701,2026,662,2029,620,2023,578,2013,553,1999,531"/>
<area shape="poly" id="edge33_Node000030_Node000031" title=" " alt="" coords="1975,531,1948,568,1944,565,1970,528"/>
<area shape="rect" id="Node000034" title=" " alt="" coords="1724,585,1811,610"/>
<area shape="poly" id="edge34_Node000030_Node000034" title=" " alt="" coords="1939,532,1810,582,1808,577,1937,527"/>
<area shape="poly" id="edge48_Node000038_Node000007" title=" " alt="" coords="2366,356,2226,400,2225,395,2364,351"/>
<area shape="poly" id="edge47_Node000038_Node000008" title=" " alt="" coords="2422,354,2416,396,2418,419,2426,440,2442,459,2461,467,2484,474,2509,487,2561,530,2609,576,2681,653,2677,657,2605,580,2557,534,2506,492,2482,479,2460,472,2439,463,2421,443,2413,420,2410,396,2416,353"/>
<area shape="poly" id="edge68_Node000038_Node000009" title=" " alt="" coords="2342,342,2226,350,2092,363,1967,380,1917,391,1879,404,1816,435,1772,469,1754,489,1739,514,1714,578,1708,599,1708,607,1713,616,1731,633,1756,648,1822,676,1906,699,1998,717,2186,741,2330,752,2329,758,2185,746,1998,722,1904,704,1821,681,1754,653,1728,637,1709,619,1703,608,1702,598,1709,576,1735,511,1750,486,1768,465,1813,430,1877,399,1915,386,1966,375,2091,357,2225,344,2342,336"/>
<area shape="poly" id="edge42_Node000038_Node000011" title=" " alt="" coords="2507,334,2673,340,2877,352,3073,371,3153,384,3214,399,3233,408,3247,419,3259,429,3278,439,3314,449,3348,451,3411,446,3440,445,3468,449,3496,462,3523,488,3540,519,3545,552,3541,588,3530,623,3495,688,3459,737,3455,734,3490,685,3525,621,3536,587,3540,553,3535,520,3519,491,3493,467,3467,454,3440,450,3411,451,3348,457,3313,454,3276,444,3257,434,3243,423,3230,413,3212,404,3152,389,3072,376,2877,358,2673,346,2507,339"/>
<area shape="poly" id="edge44_Node000038_Node000012" title=" " alt="" coords="2507,333,2683,338,2902,349,3113,368,3199,382,3264,399,3282,408,3294,419,3305,429,3322,439,3355,450,3385,456,3439,457,3491,461,3520,470,3551,487,3586,514,3617,545,3670,613,3709,681,3733,732,3729,735,3704,683,3666,616,3613,548,3583,518,3549,492,3518,475,3490,466,3438,462,3384,461,3354,455,3320,444,3302,433,3290,423,3279,412,3262,404,3198,387,3112,373,2902,354,2683,343,2507,338"/>
<area shape="poly" id="edge65_Node000038_Node000014" title=" " alt="" coords="2342,340,2133,348,1874,361,1641,380,1558,391,1510,404,1481,420,1461,437,1446,459,1433,490,1423,527,1424,559,1434,588,1452,615,1477,638,1508,659,1544,677,1584,693,1672,717,1764,735,1851,746,1925,752,1925,757,1850,751,1763,740,1671,723,1582,698,1542,682,1505,663,1473,642,1448,618,1429,591,1419,560,1418,526,1427,488,1441,457,1457,434,1478,416,1508,399,1556,386,1640,374,1874,356,2133,342,2342,334"/>
<area shape="poly" id="edge66_Node000038_Node000015" title=" " alt="" coords="2418,354,2407,395,2406,418,2411,440,2422,456,2435,465,2449,473,2465,488,2503,543,2526,591,2549,638,2567,662,2590,689,2625,716,2661,737,2658,742,2622,721,2587,693,2562,666,2545,641,2521,593,2499,546,2461,491,2446,478,2432,469,2418,460,2406,442,2400,419,2401,395,2413,353"/>
<area shape="poly" id="edge70_Node000038_Node000017" title=" " alt="" coords="2507,334,2670,341,2861,354,3029,373,3087,385,3120,399,3144,424,3162,449,3175,475,3182,501,3183,528,3179,557,3169,587,3155,619,3125,661,3085,696,3043,723,3004,743,3002,738,3040,719,3082,692,3121,658,3150,616,3164,585,3173,556,3177,528,3176,502,3170,476,3158,452,3140,428,3116,404,3085,390,3028,378,2861,359,2670,347,2507,340"/>
<area shape="poly" id="edge43_Node000038_Node000018" title=" " alt="" coords="2342,339,2121,347,1843,360,1592,378,1503,390,1451,404,1412,423,1382,443,1363,470,1358,487,1357,508,1357,598,1360,625,1371,648,1386,668,1406,686,1455,715,1508,735,1506,740,1453,720,1403,691,1382,672,1366,651,1355,626,1351,599,1351,508,1353,486,1359,467,1379,439,1409,419,1449,399,1502,385,1592,373,1843,354,2121,341,2342,334"/>
<area shape="poly" id="edge46_Node000038_Node000019" title=" " alt="" coords="2365,356,2332,375,2318,388,2307,403,2303,414,2302,424,2310,447,2327,468,2346,486,2342,490,2323,472,2306,450,2297,425,2298,412,2302,400,2314,384,2329,371,2362,351"/>
<area shape="poly" id="edge49_Node000038_Node000020" title=" " alt="" coords="2507,334,2581,339,2668,350,2760,370,2848,399,2865,408,2877,419,2888,429,2903,439,2927,448,2950,452,2993,452,3012,454,3032,458,3050,469,3068,488,3077,506,3080,526,3075,564,3070,564,3075,526,3072,507,3064,491,3047,473,3030,463,3012,459,2992,458,2950,457,2926,453,2901,444,2884,433,2873,423,2862,413,2846,404,2758,375,2667,356,2581,344,2507,339"/>
<area shape="poly" id="edge50_Node000038_Node000021" title=" " alt="" coords="2507,337,2572,344,2647,356,2725,374,2800,399,2831,417,2859,439,2934,480,2931,485,2857,444,2828,422,2798,404,2723,379,2646,361,2571,349,2506,342"/>
<area shape="poly" id="edge67_Node000038_Node000022" title=" " alt="" coords="2426,353,2430,398,2438,420,2452,439,2476,458,2501,470,2525,477,2549,479,2599,474,2648,462,2698,449,2748,445,2773,447,2798,455,2823,468,2848,487,2861,506,2869,528,2872,571,2866,571,2864,529,2857,509,2844,491,2820,472,2796,460,2772,453,2748,450,2699,455,2650,467,2600,479,2549,484,2524,482,2499,475,2473,462,2448,443,2433,423,2424,399,2421,354"/>
<area shape="poly" id="edge64_Node000038_Node000025" title=" " alt="" coords="2343,341,1786,367,1500,385,1397,395,1336,404,1279,419,1235,434,1195,456,1149,491,1112,532,1086,574,1081,571,1108,529,1146,487,1193,452,1233,429,1277,414,1335,399,1396,389,1500,380,1786,361,2342,335"/>
<area shape="poly" id="edge69_Node000038_Node000034" title=" " alt="" coords="2342,347,2204,367,2042,398,1965,417,1895,439,1839,464,1801,491,1788,509,1779,530,1771,571,1766,570,1774,529,1784,507,1797,487,1837,459,1893,434,1963,412,2041,392,2203,361,2342,342"/>
<area shape="rect" id="Node000039" title=" " alt="" coords="3333,409,3500,434"/>
<area shape="poly" id="edge45_Node000038_Node000039" title=" " alt="" coords="2507,335,2859,355,3086,374,3314,399,3347,404,3347,409,3314,404,3085,379,2859,361,2507,341"/>
<area shape="rect" id="Node000040" href="$partition__abstract_8h.html" title=" " alt="" coords="1443,489,1596,529"/>
<area shape="poly" id="edge51_Node000038_Node000040" title=" " alt="" coords="2343,341,1867,365,1640,384,1566,394,1533,403,1522,419,1517,437,1516,476,1510,476,1511,436,1518,416,1530,399,1565,388,1640,378,1867,360,2342,335"/>
<area shape="rect" id="Node000041" href="$construction_8h.html" title="Functions for constructing nuclear reaction networks." alt="" coords="2914,401,3106,441"/>
<area shape="poly" id="edge54_Node000038_Node000041" title=" " alt="" coords="2507,343,2896,399,2901,399,2900,405,2895,404,2506,348"/>
<area shape="rect" id="Node000042" href="$weak__interpolator_8h.html" title=" " alt="" coords="3345,489,3509,529"/>
<area shape="poly" id="edge73_Node000038_Node000042" title=" " alt="" coords="2507,335,2663,342,2852,354,3033,373,3107,385,3163,399,3182,408,3196,418,3227,439,3286,463,3345,483,3344,488,3285,468,3225,444,3193,422,3180,412,3161,404,3106,390,3032,378,2852,359,2662,347,2507,340"/>
<area shape="rect" id="Node000046" title=" " alt="" coords="2463,401,2613,441"/>
<area shape="poly" id="edge71_Node000038_Node000046" title=" " alt="" coords="2451,351,2504,391,2501,395,2448,356"/>
<area shape="rect" id="Node000047" title=" " alt="" coords="2637,401,2788,441"/>
<area shape="poly" id="edge72_Node000038_Node000047" title=" " alt="" coords="2489,351,2637,395,2636,400,2487,356"/>
<area shape="rect" id="Node000048" href="$weak__rate__library_8h.html" title=" " alt="" coords="1544,401,1708,441"/>
<area shape="poly" id="edge74_Node000038_Node000048" title=" " alt="" coords="2342,343,2069,365,1899,383,1728,404,1722,405,1722,399,1727,399,1898,377,2069,360,2342,338"/>
<area shape="poly" id="edge53_Node000040_Node000022" title=" " alt="" coords="1596,513,1812,527,2814,590,2814,595,1811,532,1596,518"/>
<area shape="poly" id="edge52_Node000040_Node000025" title=" " alt="" coords="1443,528,1115,590,1114,585,1442,523"/>
<area shape="poly" id="edge55_Node000041_Node000008" title=" " alt="" coords="3034,440,3052,459,3067,481,3074,506,3073,519,3068,531,3047,553,3023,562,2997,567,2969,580,2944,600,2918,620,2850,647,2782,665,2780,660,2848,642,2915,615,2941,596,2966,575,2996,562,3022,557,3044,548,3064,528,3068,517,3069,506,3062,484,3048,462,3030,443"/>
<area shape="poly" id="edge56_Node000041_Node000028" title=" " alt="" coords="2955,444,2826,488,2824,482,2954,439"/>
<area shape="poly" id="edge57_Node000041_Node000031" title=" " alt="" coords="2914,434,2280,492,2201,510,2122,532,1989,575,1988,570,2121,527,2199,505,2279,487,2914,429"/>
<area shape="poly" id="edge58_Node000041_Node000042" title=" " alt="" coords="3102,439,3332,486,3331,491,3101,444"/>
<area shape="poly" id="edge59_Node000042_Node000011" title=" " alt="" coords="3431,529,3440,732,3434,732,3425,530"/>
<area shape="poly" id="edge60_Node000042_Node000012" title=" " alt="" coords="3453,528,3717,736,3714,740,3450,532"/>
<area shape="poly" id="edge61_Node000042_Node000014" title=" " alt="" coords="3409,532,3313,620,3245,639,3159,652,3060,658,2955,661,2748,662,2660,663,2589,668,2304,707,2076,746,2075,741,2304,702,2588,663,2659,658,2748,657,2954,656,3060,653,3158,646,3244,634,3310,615,3405,528"/>
<area shape="poly" id="edge62_Node000042_Node000015" title=" " alt="" coords="3422,531,3398,576,3380,600,3357,620,3102,676,2743,751,2742,745,3101,670,3354,615,3376,596,3394,573,3418,528"/>
<area shape="poly" id="edge63_Node000042_Node000037" title=" " alt="" coords="3391,532,3294,581,3291,576,3389,527"/>
<area shape="rect" id="Node000052" href="$engine__adaptive_8h.html" title=" " alt="" coords="3459,313,3617,353"/>
<area shape="poly" id="edge76_Node000051_Node000052" title=" " alt="" coords="3229,262,3446,309,3444,314,3228,267"/>
<area shape="poly" id="edge77_Node000052_Node000007" title=" " alt="" coords="3459,342,2450,404,2249,417,2248,411,2450,399,3458,337"/>
<area shape="poly" id="edge81_Node000052_Node000011" title=" " alt="" coords="3567,352,3589,373,3607,400,3639,481,3650,516,3655,551,3655,584,3648,618,3633,654,3609,692,3594,710,3574,725,3531,744,3529,740,3572,720,3590,706,3605,689,3628,652,3642,617,3649,584,3650,551,3644,518,3634,482,3602,403,3585,376,3563,355"/>
<area shape="poly" id="edge83_Node000052_Node000012" title=" " alt="" coords="3618,343,3691,361,3729,374,3765,392,3796,413,3822,440,3839,471,3845,508,3845,599,3843,627,3837,648,3812,692,3792,718,3769,739,3765,735,3788,714,3808,689,3832,646,3838,626,3839,599,3839,508,3834,473,3817,443,3793,418,3762,396,3727,379,3690,366,3617,348"/>
<area shape="poly" id="edge80_Node000052_Node000019" title=" " alt="" coords="3542,354,3538,399,3529,423,3513,443,3492,454,3459,463,3362,476,3237,484,3097,488,2666,492,2465,505,2465,499,2666,487,3097,483,3237,479,3362,471,3458,458,3490,449,3510,439,3524,421,3533,398,3537,353"/>
<area shape="poly" id="edge78_Node000052_Node000020" title=" " alt="" coords="3558,352,3574,372,3587,395,3592,420,3589,432,3583,443,3560,459,3526,470,3442,479,3355,483,3318,486,3289,492,3190,531,3106,573,3104,568,3188,526,3288,487,3317,481,3355,478,3442,474,3525,465,3557,455,3579,440,3584,430,3586,420,3582,397,3569,375,3554,355"/>
<area shape="poly" id="edge79_Node000052_Node000021" title=" " alt="" coords="3552,352,3561,373,3569,397,3569,421,3558,443,3499,455,3369,471,3068,502,3067,497,3368,465,3499,449,3555,439,3564,420,3563,397,3556,375,3547,355"/>
<area shape="poly" id="edge82_Node000052_Node000039" title=" " alt="" coords="3513,356,3446,403,3443,398,3510,351"/>
<area shape="poly" id="edge84_Node000052_Node000041" title=" " alt="" coords="3459,350,3120,405,3119,400,3458,345"/>
<area shape="poly" id="edge86_Node000062_Node000041" title=" " alt="" coords="2756,263,2968,392,2966,396,2753,268"/>
<area shape="poly" id="edge89_Node000065_Node000007" title=" " alt="" coords="1862,351,2058,396,2057,401,1861,356"/>
<area shape="poly" id="edge90_Node000065_Node000015" title=" " alt="" coords="1667,350,1602,363,1549,382,1532,394,1522,407,1522,422,1533,440,1551,454,1574,465,1635,478,1709,483,1791,482,1953,475,2023,477,2076,487,2138,514,2181,544,2223,578,2279,615,2349,656,2423,688,2484,708,2547,725,2654,747,2653,752,2546,730,2483,713,2421,693,2347,660,2277,620,2220,582,2178,548,2135,519,2075,492,2022,482,1953,481,1791,487,1709,488,1634,484,1573,470,1548,458,1529,443,1517,423,1517,406,1528,390,1547,377,1601,358,1665,345"/>
<area shape="poly" id="edge91_Node000065_Node000025" title=" " alt="" coords="1666,341,1507,349,1332,361,1183,379,1132,391,1105,403,1090,421,1080,442,1068,488,1066,533,1070,571,1064,572,1061,533,1063,487,1075,440,1086,418,1102,399,1131,386,1182,374,1331,356,1507,343,1666,336"/>
<area shape="rect" id="Node000068" href="$error__gridfire_8h.html" title=" " alt="" coords="560,489,703,529"/>
<area shape="poly" id="edge93_Node000067_Node000068" title=" " alt="" coords="644,353,662,401,665,421,662,442,650,477,645,476,657,441,659,421,657,402,639,355"/>
<area shape="rect" id="Node000070" href="$error__engine_8h.html" title=" " alt="" coords="724,401,867,441"/>
<area shape="poly" id="edge95_Node000067_Node000070" title=" " alt="" coords="669,351,749,393,746,397,666,356"/>
<area shape="rect" id="Node000071" href="$error__utils_8h.html" title=" " alt="" coords="172,401,315,441"/>
<area shape="poly" id="edge97_Node000067_Node000071" title=" " alt="" coords="560,353,329,403,328,398,559,348"/>
<area shape="rect" id="Node000072" href="$error__debug_8h.html" title=" " alt="" coords="5,401,148,441"/>
<area shape="poly" id="edge99_Node000067_Node000072" title=" " alt="" coords="560,346,383,369,162,404,161,398,382,363,560,340"/>
<area shape="rect" id="Node000075" href="$error__policy_8h.html" title="Defines custom exception types related to network policy construction and verification." alt="" coords="339,401,481,441"/>
<area shape="poly" id="edge102_Node000067_Node000075" title=" " alt="" coords="584,356,472,399,470,394,582,351"/>
<area shape="rect" id="Node000076" href="$error__reaction_8h.html" title=" " alt="" coords="891,401,1033,441"/>
<area shape="poly" id="edge104_Node000067_Node000076" title=" " alt="" coords="703,350,878,396,877,401,702,356"/>
<area shape="rect" id="Node000077" href="$error__solver_8h.html" title=" " alt="" coords="505,401,648,441"/>
<area shape="poly" id="edge107_Node000067_Node000077" title=" " alt="" coords="621,355,598,391,594,388,617,352"/>
<area shape="poly" id="edge94_Node000068_Node000025" title=" " alt="" coords="704,522,1029,585,1028,590,702,527"/>
<area shape="poly" id="edge96_Node000070_Node000068" title=" " alt="" coords="761,444,681,485,678,481,758,439"/>
<area shape="poly" id="edge98_Node000071_Node000068" title=" " alt="" coords="316,436,327,439,547,487,546,492,325,444,314,441"/>
<area shape="poly" id="edge100_Node000072_Node000025" title=" " alt="" coords="149,439,329,482,548,527,685,548,821,566,1029,589,1028,595,820,572,684,554,547,532,328,487,148,444"/>
<area shape="poly" id="edge101_Node000072_Node000068" title=" " alt="" coords="149,437,160,439,368,472,547,495,546,501,367,477,159,444,148,442"/>
<area shape="poly" id="edge103_Node000075_Node000068" title=" " alt="" coords="460,439,571,482,569,487,458,444"/>
<area shape="poly" id="edge105_Node000076_Node000025" title=" " alt="" coords="976,440,1059,571,1054,574,972,443"/>
<area shape="poly" id="edge106_Node000076_Node000068" title=" " alt="" coords="891,444,717,489,715,484,890,438"/>
<area shape="poly" id="edge108_Node000077_Node000068" title=" " alt="" coords="591,440,614,476,610,479,587,443"/>
<area shape="poly" id="edge111_Node000079_Node000006" title=" " alt="" coords="3652,100,2437,161,2437,156,3652,94"/>
<area shape="poly" id="edge112_Node000079_Node000011" title=" " alt="" coords="3768,102,3806,123,3848,154,3866,173,3881,194,3892,218,3895,244,3895,423,3892,458,3883,491,3870,522,3851,551,3803,601,3745,644,3681,680,3616,708,3502,745,3500,740,3614,703,3679,675,3742,640,3800,598,3847,547,3865,519,3878,489,3887,457,3890,423,3890,244,3886,219,3877,197,3862,176,3844,158,3803,127,3766,106"/>
<area shape="poly" id="edge113_Node000079_Node000015" title=" " alt="" coords="3750,103,3777,162,3789,202,3794,244,3794,335,3790,395,3778,447,3759,491,3733,528,3700,559,3663,583,3620,603,3573,619,3467,641,3350,657,3226,672,3098,693,2901,729,2744,754,2743,748,2900,724,3098,688,3225,667,3349,652,3466,636,3571,614,3618,598,3660,579,3697,554,3729,525,3754,489,3773,446,3785,395,3789,335,3789,244,3784,203,3772,164,3745,105"/>
<area shape="poly" id="edge114_Node000079_Node000037" title=" " alt="" coords="3743,104,3743,244,3743,335,3739,365,3726,391,3705,413,3679,431,3648,446,3614,459,3539,476,3465,486,3399,490,3334,492,3313,509,3295,530,3270,573,3266,571,3291,527,3309,505,3332,487,3399,484,3464,480,3538,471,3612,454,3646,441,3676,427,3702,409,3721,388,3734,363,3738,334,3738,244,3738,104"/>
<area shape="rect" id="Node000001" title=" " alt="" coords="2035,5,2236,31"/>
<area shape="rect" id="Node000002" title=" " alt="" coords="1679,153,1819,178"/>
<area shape="poly" id="edge1_Node000001_Node000002" title=" " alt="" coords="2032,25,1960,34,1884,44,1818,60,1794,70,1776,81,1766,93,1759,107,1752,139,1748,136,1754,106,1761,90,1772,77,1791,65,1817,55,1883,39,1959,28,2037,24"/>
<area shape="rect" id="Node000003" title=" " alt="" coords="1891,79,1993,105"/>
<area shape="poly" id="edge2_Node000001_Node000003" title=" " alt="" coords="2105,31,1990,76,1989,71,2100,32"/>
<area shape="rect" id="Node000004" title=" " alt="" coords="2017,79,2150,105"/>
<area shape="poly" id="edge3_Node000001_Node000004" title=" " alt="" coords="2129,30,2103,68,2100,64,2125,33"/>
<area shape="rect" id="Node000005" href="$engine_2bindings_8h.html" title=" " alt="" coords="1786,79,1866,105"/>
<area shape="poly" id="edge4_Node000001_Node000005" title=" " alt="" coords="2080,32,1882,80,1881,75,2085,31"/>
<area shape="rect" id="Node000006" href="$engine_8h.html" title="Core header for the GridFire reaction network engine module." alt="" coords="1843,153,1998,178"/>
<area shape="poly" id="edge6_Node000001_Node000006" title=" " alt="" coords="2146,29,2168,65,2171,87,2164,106,2141,123,2104,137,2014,156,2013,151,2103,132,2138,119,2160,103,2166,86,2163,67,2144,34"/>
<area shape="rect" id="Node000088" href="$exceptions_8h.html" title=" " alt="" coords="2793,315,2920,356"/>
<area shape="poly" id="edge87_Node000001_Node000088" title=" " alt="" coords="2212,29,2300,48,2392,77,2518,131,2637,195,2741,256,2818,307,2813,306,2738,260,2635,199,2515,136,2391,81,2299,53,2212,34"/>
<area shape="rect" id="Node000095" title=" " alt="" coords="3173,79,3298,105"/>
<area shape="poly" id="edge102_Node000001_Node000095" title=" " alt="" coords="2236,20,2639,38,2895,54,3154,76,3160,79,3155,79,3154,82,2895,60,2638,43,2237,25"/>
<area shape="rect" id="Node000096" href="$py__engine_8h.html" title=" " alt="" coords="2224,79,2380,105"/>
<area shape="poly" id="edge103_Node000001_Node000096" title=" " alt="" coords="2164,29,2263,73,2257,72,2164,34"/>
<area shape="poly" id="edge5_Node000005_Node000002" title=" " alt="" coords="1815,104,1774,144,1772,140,1811,107"/>
<area shape="rect" id="Node000007" href="$engine__abstract_8h.html" title="Abstract interfaces for reaction network engines in GridFire." alt="" coords="878,315,1022,356"/>
<area shape="poly" id="edge7_Node000006_Node000007" title=" " alt="" coords="1840,178,1832,181,1676,185,1417,190,1161,203,1067,214,1035,221,1014,229,997,243,982,261,962,302,958,298,978,259,993,239,1011,224,1033,215,1066,208,1161,197,1417,185,1676,180,1831,176,1846,177"/>
<area shape="rect" id="Node000045" href="$engine__graph_8h.html" title=" " alt="" coords="1025,226,1169,267"/>
<area shape="poly" id="edge47_Node000006_Node000045" title=" " alt="" coords="1840,178,1832,181,1472,216,1185,241,1184,236,1472,211,1831,176,1846,177"/>
<area shape="rect" id="Node000061" href="$engine__views_8h.html" title=" " alt="" coords="1509,226,1650,267"/>
<area shape="poly" id="edge76_Node000006_Node000061" title=" " alt="" coords="1866,180,1665,228,1664,223,1871,178"/>
<area shape="rect" id="Node000072" href="$engine__procedures_8h.html" title=" " alt="" coords="525,226,695,267"/>
<area shape="poly" id="edge77_Node000006_Node000072" title=" " alt="" coords="1840,178,1832,181,1582,201,1388,210,944,229,711,242,710,237,943,224,1388,205,1582,195,1831,176,1846,177"/>
<area shape="rect" id="Node000074" href="$engine__types_8h.html" title=" " alt="" coords="1674,226,1813,267"/>
<area shape="poly" id="edge79_Node000006_Node000074" title=" " alt="" coords="1896,178,1802,222,1801,217,1891,180"/>
<area shape="rect" id="Node000075" href="$dynamic__engine__diagnostics_8h.html" title="Diagnostics utilities for DynamicEngine instances." alt="" coords="2051,226,2254,267"/>
<area shape="poly" id="edge80_Node000006_Node000075" title=" " alt="" coords="1957,176,2083,221,2078,221,1956,182"/>
<area shape="rect" id="Node000077" href="$scratchpads_8h.html" title="Unified header for the scratchpad memory management system." alt="" coords="1836,226,2014,267"/>
<area shape="poly" id="edge85_Node000006_Node000077" title=" " alt="" coords="1923,177,1925,213,1921,209,1920,181"/>
<area shape="rect" id="Node000008" href="$reaction_8h.html" title="Defines classes for representing and managing nuclear reactions." alt="" coords="406,581,577,607"/>
<area shape="poly" id="edge8_Node000007_Node000008" title=" " alt="" coords="943,354,921,396,887,444,844,494,819,516,792,535,744,559,693,575,641,586,593,592,592,587,640,581,691,570,742,554,789,531,815,512,840,490,883,441,916,393,938,358"/>
<area shape="rect" id="Node000014" title=" " alt="" coords="811,662,921,688"/>
<area shape="poly" id="edge44_Node000007_Node000014" title=" " alt="" coords="976,354,1014,387,1050,431,1063,456,1072,482,1073,508,1065,534,1034,577,995,611,953,638,913,658,912,653,950,634,992,607,1030,573,1060,532,1067,507,1066,483,1059,458,1045,434,1010,391,975,359"/>
<area shape="rect" id="Node000015" title=" " alt="" coords="1746,662,1803,688"/>
<area shape="poly" id="edge43_Node000007_Node000015" title=" " alt="" coords="1019,354,1079,374,1139,401,1169,422,1198,442,1233,458,1261,468,1327,490,1734,656,1729,656,1325,495,1260,473,1231,463,1196,447,1166,426,1137,406,1077,379,1018,359"/>
<area shape="rect" id="Node000019" href="$types_2types_8h.html" title=" " alt="" coords="188,581,331,607"/>
<area shape="poly" id="edge16_Node000007_Node000019" title=" " alt="" coords="875,346,754,369,684,385,616,406,520,446,429,493,291,575,289,570,426,488,518,441,615,401,683,380,753,364,880,344"/>
<area shape="rect" id="Node000020" href="$screening__abstract_8h.html" title=" " alt="" coords="904,492,1050,533"/>
<area shape="poly" id="edge19_Node000007_Node000020" title=" " alt="" coords="968,354,985,377,997,403,1000,442,992,479,988,476,995,442,992,404,980,379,967,359"/>
<area shape="rect" id="Node000021" href="$screening__types_8h.html" title=" " alt="" coords="1208,404,1340,444"/>
<area shape="poly" id="edge24_Node000007_Node000021" title=" " alt="" coords="1023,353,1196,401,1191,402,1023,359"/>
<area shape="rect" id="Node000023" href="$reporting_8h.html" title=" " alt="" coords="1176,492,1314,533"/>
<area shape="poly" id="edge27_Node000007_Node000023" title=" " alt="" coords="995,353,1090,401,1153,442,1209,483,1204,482,1150,446,1088,406,994,359"/>
<area shape="rect" id="Node000028" href="$jacobian_8h.html" title="Wrapper for handling the network Jacobian matrix in GridFire. Currently uses Eigen&#39;s SparseMatrix." alt="" coords="665,404,803,444"/>
<area shape="poly" id="edge30_Node000007_Node000028" title=" " alt="" coords="904,355,799,400,797,395,899,357"/>
<area shape="rect" id="Node000029" title=" " alt="" coords="517,492,677,533"/>
<area shape="poly" id="edge42_Node000007_Node000029" title=" " alt="" coords="875,337,824,344,766,355,707,375,654,406,639,421,626,440,608,479,604,475,621,437,635,418,651,402,705,370,764,350,824,339,880,336"/>
<area shape="rect" id="Node000034" href="$error__engine_8h.html" title=" " alt="" coords="2489,404,2616,444"/>
<area shape="poly" id="edge35_Node000007_Node000034" title=" " alt="" coords="1022,339,1237,353,1424,360,1584,362,1855,359,1987,360,2127,365,2287,378,2476,403,2471,404,2286,383,2127,370,1986,365,1855,364,1584,367,1424,365,1237,358,1023,345"/>
<area shape="rect" id="Node000037" href="$blob_8h.html" title="Container class for managing multiple scratchpad instances." alt="" coords="1516,404,1694,444"/>
<area shape="poly" id="edge38_Node000007_Node000037" title=" " alt="" coords="1023,344,1503,408,1498,410,1023,349"/>
<area shape="rect" id="Node000043" title=" " alt="" coords="1588,500,1662,526"/>
<area shape="poly" id="edge46_Node000007_Node000043" title=" " alt="" coords="1023,341,1176,363,1265,380,1352,401,1418,422,1482,446,1588,493,1583,493,1480,451,1416,427,1351,406,1263,385,1175,368,1023,347"/>
<area shape="rect" id="Node000044" title=" " alt="" coords="929,411,982,437"/>
<area shape="poly" id="edge45_Node000007_Node000044" title=" " alt="" coords="953,354,956,397,952,394,950,358"/>
<area shape="rect" id="Node000009" title=" " alt="" coords="5,662,66,688"/>
<area shape="poly" id="edge9_Node000008_Node000009" title=" " alt="" coords="403,606,226,630,140,644,79,657,74,659,72,654,77,652,140,639,225,625,408,604"/>
<area shape="rect" id="Node000011" title=" " alt="" coords="1036,662,1241,688"/>
<area shape="poly" id="edge10_Node000008_Node000011" title=" " alt="" coords="578,603,1026,659,1021,661,578,608"/>
<area shape="rect" id="Node000012" title=" " alt="" coords="90,662,253,688"/>
<area shape="poly" id="edge11_Node000008_Node000012" title=" " alt="" coords="445,608,236,661,235,655,440,607"/>
<area shape="poly" id="edge12_Node000008_Node000014" title=" " alt="" coords="550,605,799,659,794,659,549,610"/>
<area shape="poly" id="edge13_Node000008_Node000015" title=" " alt="" coords="578,598,1731,668,1730,674,578,603"/>
<area shape="rect" id="Node000017" title=" " alt="" coords="437,662,557,688"/>
<area shape="poly" id="edge14_Node000008_Node000017" title=" " alt="" coords="494,605,497,648,493,645,491,609"/>
<area shape="rect" id="Node000018" title=" " alt="" coords="277,655,412,695"/>
<area shape="poly" id="edge15_Node000008_Node000018" title=" " alt="" coords="472,606,395,650,393,645,467,608"/>
<area shape="poly" id="edge18_Node000019_Node000017" title=" " alt="" coords="297,605,448,656,443,657,296,610"/>
<area shape="poly" id="edge17_Node000019_Node000018" title=" " alt="" coords="273,605,315,644,310,644,272,610"/>
<area shape="poly" id="edge20_Node000020_Node000008" title=" " alt="" coords="901,526,582,581,581,575,906,525"/>
<area shape="poly" id="edge21_Node000020_Node000011" title=" " alt="" coords="997,531,1071,605,1118,652,1113,651,1067,609,995,536"/>
<area shape="poly" id="edge23_Node000020_Node000015" title=" " alt="" coords="1051,529,1204,565,1384,604,1577,639,1733,667,1727,667,1576,645,1383,609,1203,571,1050,535"/>
<area shape="poly" id="edge22_Node000020_Node000017" title=" " alt="" coords="921,534,548,659,547,654,915,533"/>
<area shape="poly" id="edge25_Node000021_Node000020" title=" " alt="" coords="1211,444,1060,490,1058,485,1206,445"/>
<area shape="rect" id="Node000022" title=" " alt="" coords="1444,500,1512,526"/>
<area shape="poly" id="edge26_Node000021_Node000022" title=" " alt="" coords="1321,442,1438,494,1433,493,1320,447"/>
<area shape="poly" id="edge29_Node000023_Node000018" title=" " alt="" coords="1178,524,857,578,646,615,428,657,427,652,645,610,856,573,1173,525"/>
<area shape="rect" id="Node000025" title=" " alt="" coords="2273,581,2326,607"/>
<area shape="poly" id="edge28_Node000023_Node000025" title=" " alt="" coords="1314,519,1432,530,1917,566,2260,590,2255,590,1916,572,1431,536,1314,524"/>
<area shape="poly" id="edge31_Node000028_Node000011" title=" " alt="" coords="804,429,951,451,1018,468,1045,479,1064,490,1095,526,1117,568,1130,611,1137,648,1133,645,1125,612,1112,570,1091,529,1060,494,1042,483,1016,473,949,456,804,435"/>
<area shape="poly" id="edge34_Node000028_Node000014" title=" " alt="" coords="754,442,792,491,834,574,860,648,856,646,829,577,788,494,752,447"/>
<area shape="poly" id="edge32_Node000028_Node000029" title=" " alt="" coords="705,444,642,486,639,482,701,446"/>
<area shape="rect" id="Node000032" title=" " alt="" coords="701,500,778,526"/>
<area shape="poly" id="edge33_Node000028_Node000032" title=" " alt="" coords="737,443,740,486,736,483,734,447"/>
<area shape="rect" id="Node000035" href="$error__gridfire_8h.html" title=" " alt="" coords="2692,492,2819,533"/>
<area shape="poly" id="edge36_Node000034_Node000035" title=" " alt="" coords="2599,442,2698,486,2693,486,2598,447"/>
<area shape="poly" id="edge37_Node000035_Node000025" title=" " alt="" coords="2694,525,2341,588,2341,583,2689,525"/>
<area shape="poly" id="edge39_Node000037_Node000014" title=" " alt="" coords="1598,443,1571,491,1550,515,1526,535,1479,558,1414,580,1251,618,1078,648,937,668,936,662,1077,642,1250,613,1412,575,1477,553,1523,531,1547,512,1566,488,1594,446"/>
<area shape="poly" id="edge40_Node000037_Node000022" title=" " alt="" coords="1579,444,1509,493,1507,488,1574,446"/>
<area shape="poly" id="edge41_Node000037_Node000043" title=" " alt="" coords="1611,443,1621,486,1616,483,1608,447"/>
<area shape="poly" id="edge54_Node000045_Node000007" title=" " alt="" coords="1066,266,998,309,995,305,1061,269"/>
<area shape="poly" id="edge53_Node000045_Node000008" title=" " alt="" coords="1021,250,953,258,869,269,781,288,695,317,617,350,556,382,530,401,507,424,485,455,463,493,459,512,461,531,477,569,472,567,456,532,453,511,458,491,480,452,503,421,527,397,553,377,614,346,693,313,779,283,868,264,953,252,1027,249"/>
<area shape="poly" id="edge71_Node000045_Node000009" title=" " alt="" coords="1023,254,490,286,229,305,110,317,81,338,61,360,51,387,47,423,47,514,41,647,35,646,42,514,42,423,46,386,57,358,77,334,108,313,228,299,489,281,1026,250"/>
<area shape="poly" id="edge48_Node000045_Node000011" title=" " alt="" coords="1099,265,1109,311,1119,334,1135,354,1162,371,1190,378,1218,377,1246,373,1274,369,1302,370,1329,380,1354,402,1365,420,1371,439,1372,458,1369,477,1351,514,1322,549,1286,582,1247,612,1175,657,1173,652,1244,608,1283,578,1318,546,1347,511,1364,475,1367,458,1366,440,1360,423,1349,405,1326,384,1301,375,1275,375,1247,378,1218,382,1189,383,1160,376,1131,358,1115,337,1104,313,1096,270"/>
<area shape="poly" id="edge50_Node000045_Node000012" title=" " alt="" coords="1022,253,525,281,279,299,197,309,159,317,132,338,114,361,105,388,102,423,102,514,107,552,121,589,138,622,156,650,150,649,133,624,116,591,102,554,97,514,97,423,100,386,109,358,128,335,157,313,197,303,278,294,524,275,1026,249"/>
<area shape="poly" id="edge68_Node000045_Node000014" title=" " alt="" coords="1022,251,899,267,825,282,749,304,675,335,608,376,577,401,550,428,527,459,507,493,501,513,507,531,521,543,549,557,631,591,817,657,811,657,630,596,546,562,518,547,503,535,495,513,502,491,522,456,546,425,574,397,605,372,673,330,747,299,824,277,898,261,1027,249"/>
<area shape="poly" id="edge69_Node000045_Node000015" title=" " alt="" coords="1169,249,1702,279,1960,297,2043,305,2078,313,2097,337,2106,363,2107,388,2102,414,2091,439,2074,464,2029,513,1974,558,1916,598,1813,657,1812,652,1913,594,1971,554,2026,509,2070,461,2086,437,2097,412,2102,388,2101,364,2092,340,2075,317,2042,311,1960,302,1701,284,1170,254"/>
<area shape="poly" id="edge73_Node000045_Node000017" title=" " alt="" coords="1022,253,587,279,377,297,309,307,278,317,268,332,262,352,261,377,268,408,284,446,309,491,346,544,396,605,426,632,460,655,455,654,423,636,392,609,342,547,305,494,279,449,263,410,256,378,257,351,263,330,275,313,308,302,376,292,586,274,1026,250"/>
<area shape="poly" id="edge49_Node000045_Node000018" title=" " alt="" coords="1022,253,550,281,318,300,242,309,206,317,179,339,163,361,155,388,153,423,153,514,155,564,162,584,177,605,212,626,267,649,261,650,209,631,174,609,157,586,150,565,148,514,148,423,150,387,158,359,176,335,204,313,241,304,318,294,549,276,1026,250"/>
<area shape="poly" id="edge52_Node000045_Node000019" title=" " alt="" coords="1022,254,557,286,333,303,263,311,234,317,216,345,206,377,204,411,208,447,226,514,249,567,243,567,221,516,202,448,199,411,201,376,211,343,231,313,262,306,333,298,556,280,1026,251"/>
<area shape="poly" id="edge55_Node000045_Node000020" title=" " alt="" coords="1022,260,931,284,892,299,868,317,858,337,856,359,861,381,872,403,905,446,942,483,937,482,901,449,868,406,856,383,851,359,853,336,864,313,889,295,929,279,1027,259"/>
<area shape="poly" id="edge56_Node000045_Node000021" title=" " alt="" coords="1091,265,1083,311,1085,334,1094,354,1108,367,1132,379,1196,403,1191,403,1130,384,1105,371,1089,357,1080,335,1078,310,1087,269"/>
<area shape="poly" id="edge70_Node000045_Node000022" title=" " alt="" coords="1107,265,1137,311,1157,334,1181,353,1210,368,1237,375,1288,377,1339,379,1367,386,1397,401,1420,420,1439,442,1468,487,1463,485,1435,445,1416,424,1394,406,1365,391,1338,384,1287,382,1236,381,1208,373,1178,358,1153,338,1133,314,1105,270"/>
<area shape="poly" id="edge67_Node000045_Node000025" title=" " alt="" coords="1169,249,1724,281,1996,299,2122,313,2143,330,2166,357,2213,428,2290,569,2285,566,2209,430,2162,360,2139,334,2120,317,1996,304,1724,286,1170,255"/>
<area shape="poly" id="edge72_Node000045_Node000032" title=" " alt="" coords="1022,249,934,260,883,270,830,284,779,304,731,330,689,364,655,405,649,424,655,443,675,470,703,492,697,491,672,473,650,446,644,424,650,402,686,360,728,326,777,299,829,279,881,264,933,255,1027,248"/>
<area shape="poly" id="edge65_Node000045_Node000037" title=" " alt="" coords="1121,265,1189,318,1238,353,1504,404,1499,405,1236,358,1186,323,1120,270"/>
<area shape="rect" id="Node000046" title=" " alt="" coords="1899,411,2049,437"/>
<area shape="poly" id="edge51_Node000045_Node000046" title=" " alt="" coords="1169,249,1491,270,1662,288,1731,300,1784,312,1831,331,1876,354,1949,402,1944,401,1874,359,1829,336,1783,318,1730,305,1661,294,1491,275,1169,254"/>
<area shape="rect" id="Node000047" href="$partition__abstract_8h.html" title=" " alt="" coords="1718,404,1854,444"/>
<area shape="poly" id="edge57_Node000045_Node000047" title=" " alt="" coords="1169,248,1322,256,1504,270,1665,288,1721,300,1753,313,1768,329,1777,348,1787,390,1782,387,1773,350,1763,332,1750,317,1720,305,1664,293,1504,275,1322,262,1170,254"/>
<area shape="rect" id="Node000048" href="$construction_8h.html" title="Functions for constructing nuclear reaction networks." alt="" coords="289,315,459,356"/>
<area shape="poly" id="edge60_Node000045_Node000048" title=" " alt="" coords="1022,255,782,280,479,318,476,318,474,313,478,312,781,275,1027,253"/>
<area shape="rect" id="Node000054" href="$config_8h.html" title=" " alt="" coords="1916,322,2065,348"/>
<area shape="poly" id="edge63_Node000045_Node000054" title=" " alt="" coords="1169,251,1465,275,1846,312,1903,321,1898,322,1846,318,1465,280,1169,256"/>
<area shape="rect" id="Node000055" title=" " alt="" coords="1249,322,1419,348"/>
<area shape="poly" id="edge66_Node000045_Node000055" title=" " alt="" coords="1151,265,1289,317,1284,317,1151,270"/>
<area shape="rect" id="Node000056" title=" " alt="" coords="1443,315,1577,356"/>
<area shape="poly" id="edge74_Node000045_Node000056" title=" " alt="" coords="1169,259,1430,314,1425,315,1169,264"/>
<area shape="rect" id="Node000057" title=" " alt="" coords="1601,315,1739,356"/>
<area shape="poly" id="edge75_Node000045_Node000057" title=" " alt="" coords="1169,253,1354,276,1588,314,1583,315,1354,281,1169,258"/>
<area shape="poly" id="edge59_Node000047_Node000022" title=" " alt="" coords="1720,444,1528,500,1527,495,1715,445"/>
<area shape="poly" id="edge58_Node000047_Node000025" title=" " alt="" coords="1846,442,2260,579,2255,579,1846,447"/>
<area shape="poly" id="edge61_Node000048_Node000008" title=" " alt="" coords="374,354,376,391,381,437,392,486,412,532,431,553,455,573,450,572,428,557,408,534,387,488,375,438,371,392,372,359"/>
<area shape="poly" id="edge62_Node000048_Node000029" title=" " alt="" coords="398,353,509,442,561,483,556,483,506,446,397,359"/>
<area shape="poly" id="edge64_Node000054_Node000046" title=" " alt="" coords="1990,347,1981,398,1977,394,1986,350"/>
<area shape="poly" id="edge78_Node000072_Node000048" title=" " alt="" coords="554,269,443,312,441,307,559,266"/>
<area shape="poly" id="edge81_Node000075_Node000007" title=" " alt="" coords="2048,265,2026,270,1805,290,1632,299,1459,306,1237,318,1038,331,1037,325,1237,312,1459,301,1632,294,1805,284,2026,264,2053,264"/>
<area shape="poly" id="edge83_Node000075_Node000015" title=" " alt="" coords="2255,250,2540,268,2714,282,2890,300,3053,323,3188,351,3240,366,3280,383,3306,401,3313,412,3315,422,3315,514,3312,529,3301,543,3260,568,3197,589,3115,607,3017,622,2907,635,2660,655,2402,667,2158,673,1818,677,1818,671,2158,668,2402,662,2660,649,2906,630,3017,617,3114,602,3196,584,3258,563,3297,539,3307,527,3310,514,3310,423,3308,414,3302,405,3278,388,3239,371,3187,356,3052,328,2890,306,2714,287,2539,273,2255,255"/>
<area shape="poly" id="edge84_Node000075_Node000025" title=" " alt="" coords="2180,265,2204,287,2224,314,2256,381,2278,451,2292,516,2299,567,2295,564,2287,517,2273,453,2251,383,2220,316,2200,291,2178,270"/>
<area shape="poly" id="edge82_Node000075_Node000037" title=" " alt="" coords="2147,266,2122,315,2102,339,2078,358,2029,383,1985,398,1943,404,1903,405,1816,401,1766,401,1709,406,1708,401,1766,396,1816,396,1903,400,1943,399,1984,393,2027,378,2075,353,2099,335,2117,312,2143,269"/>
<area shape="poly" id="edge86_Node000077_Node000037" title=" " alt="" coords="1899,266,1832,312,1753,358,1667,399,1665,394,1750,353,1829,307,1894,268"/>
<area shape="poly" id="edge89_Node000088_Node000034" title=" " alt="" coords="2795,354,2632,403,2631,398,2790,355"/>
<area shape="poly" id="edge88_Node000088_Node000035" title=" " alt="" coords="2848,355,2776,481,2773,477,2843,357"/>
<area shape="rect" id="Node000089" href="$error__utils_8h.html" title=" " alt="" coords="2844,404,2971,444"/>
<area shape="poly" id="edge90_Node000088_Node000089" title=" " alt="" coords="2870,354,2891,391,2886,389,2867,359"/>
<area shape="rect" id="Node000090" href="$error__debug_8h.html" title=" " alt="" coords="3148,404,3275,444"/>
<area shape="poly" id="edge92_Node000088_Node000090" title=" " alt="" coords="2921,349,3135,403,3130,403,2921,355"/>
<area shape="rect" id="Node000092" href="$error__policy_8h.html" title="Defines custom exception types related to network policy construction and verification." alt="" coords="2996,404,3123,444"/>
<area shape="poly" id="edge95_Node000088_Node000092" title=" " alt="" coords="2903,354,3002,398,2997,397,2902,359"/>
<area shape="rect" id="Node000093" href="$error__reaction_8h.html" title=" " alt="" coords="2337,404,2464,444"/>
<area shape="poly" id="edge97_Node000088_Node000093" title=" " alt="" coords="2795,346,2654,373,2480,406,2479,401,2653,367,2790,347"/>
<area shape="rect" id="Node000094" href="$error__solver_8h.html" title=" " alt="" coords="2641,404,2768,444"/>
<area shape="poly" id="edge100_Node000088_Node000094" title=" " alt="" coords="2825,355,2753,398,2751,393,2820,357"/>
<area shape="poly" id="edge91_Node000089_Node000035" title=" " alt="" coords="2876,444,2804,487,2802,482,2870,446"/>
<area shape="poly" id="edge93_Node000090_Node000025" title=" " alt="" coords="3156,444,3009,492,2921,516,2832,536,2692,559,2553,575,2341,593,2341,588,2552,570,2691,553,2831,530,2920,510,3008,487,3151,445"/>
<area shape="poly" id="edge94_Node000090_Node000035" title=" " alt="" coords="3150,441,3136,447,2976,478,2835,502,2834,496,2975,473,3135,442,3145,442"/>
<area shape="poly" id="edge96_Node000092_Node000035" title=" " alt="" coords="2998,443,2834,492,2833,487,2993,444"/>
<area shape="poly" id="edge98_Node000093_Node000025" title=" " alt="" coords="2392,443,2316,570,2313,565,2387,446"/>
<area shape="poly" id="edge99_Node000093_Node000035" title=" " alt="" coords="2465,439,2477,442,2679,493,2674,492,2476,447,2465,444"/>
<area shape="poly" id="edge101_Node000094_Node000035" title=" " alt="" coords="2718,442,2739,480,2734,478,2715,447"/>
<area shape="poly" id="edge104_Node000096_Node000006" title=" " alt="" coords="2234,106,2001,152,2000,147,2240,105"/>
<area shape="poly" id="edge105_Node000096_Node000011" title=" " alt="" coords="2304,103,2299,177,2288,224,2269,268,2225,332,2182,376,2131,410,2062,447,1958,495,1849,536,1737,571,1627,600,1421,641,1256,665,1256,659,1420,636,1626,595,1736,566,1847,531,1956,490,2060,442,2128,406,2179,372,2221,329,2264,266,2283,222,2293,176,2300,107"/>
<area shape="poly" id="edge106_Node000096_Node000015" title=" " alt="" coords="2363,103,2615,157,2779,195,2948,239,3107,285,3240,333,3292,356,3331,378,3357,401,3366,422,3366,514,3369,521,3374,528,3377,536,3372,546,3355,557,3321,570,3184,609,3057,632,2887,649,2689,662,2479,670,2082,676,1818,677,1818,671,2082,671,2479,664,2689,656,2887,644,3056,627,3183,604,3320,565,3353,552,3368,542,3372,536,3369,530,3364,523,3361,514,3361,423,3353,404,3328,383,3289,360,3238,337,3105,290,2947,244,2778,201,2613,162,2363,108"/>
<area shape="poly" id="edge107_Node000096_Node000043" title=" " alt="" coords="2304,103,2299,177,2288,224,2269,268,2226,333,2183,378,2132,412,2062,447,2012,467,1959,483,1853,503,1755,513,1678,515,1678,510,1755,507,1853,498,1958,477,2010,462,2060,442,2129,408,2180,374,2222,330,2264,266,2283,222,2293,176,2300,107"/>
</map>