From 7d611c56ade75ff62e826b0a85f6da9dc3d3ea0d Mon Sep 17 00:00:00 2001
From: Emily Boudreaux <thomas@boudreauxmail.com>
Date: Mon, 20 Apr 2026 12:45:31 -0400
Subject: [PATCH] docs(rebuilt-docs): rebuild docs for v0.7.6rc4.0

---
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 docs/html/____init_____8py.js                 |   19 +-
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 docs/html/_grid_solver_8h.html                |  145 +
 docs/html/_grid_solver_8h.js                  |    5 +
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 docs/html/_point_solver_8h.js                 |    9 +
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 docs/html/annotated.html                      |  414 ++-
 docs/html/annotated_dup.js                    |  305 +-
 docs/html/bindings_8cpp.html                  |   40 +-
 docs/html/bindings_8cpp__incl.map             |   76 +-
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 docs/html/blob_8h.html                        |  214 ++
 docs/html/blob_8h.js                          |    5 +
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 docs/html/chains_8h__incl.map                 |  290 +-
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+<code>#include &quot;<a class="el" href="error__solver_8h.html">gridfire/exceptions/error_solver.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="_point_solver_8h.html">gridfire/solver/strategies/PointSolver.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="macros_8h.html">gridfire/utils/macros.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="gf__omp_8h.html">gridfire/utils/gf_omp.h</a>&quot;</code><br />
+<code>#include &lt;cstdio&gt;</code><br />
+<code>#include &lt;print&gt;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for GridSolver.cpp:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="_grid_solver_8cpp__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
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+  <ul>
+    <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_c85d3e3c5052e9ad9ce18c6863244a25.html">lib</a></li><li class="navelem"><a class="el" href="dir_4fd0dc9a50f7a53e22cb356c650f915e.html">solver</a></li><li class="navelem"><a class="el" href="dir_b0553efdd4ad7f265c0580564941af0c.html">strategies</a></li><li class="navelem"><a class="el" href="_grid_solver_8cpp.html">GridSolver.cpp</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+  <div class="headertitle"><div class="title">PointSolver.cpp File Reference</div></div>
+</div><!--header-->
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+<div class="textblock"><code>#include &quot;<a class="el" href="_point_solver_8h.html">gridfire/solver/strategies/PointSolver.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="types_2types_8h.html">gridfire/types/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="table__format_8h.html">gridfire/utils/table_format.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="dynamic__engine__diagnostics_8h.html">gridfire/engine/diagnostics/dynamic_engine_diagnostics.h</a>&quot;</code><br />
+<code>#include &quot;quill/LogMacros.h&quot;</code><br />
+<code>#include &quot;fourdst/composition/composition.h&quot;</code><br />
+<code>#include &lt;cstdint&gt;</code><br />
+<code>#include &lt;limits&gt;</code><br />
+<code>#include &lt;string&gt;</code><br />
+<code>#include &lt;unordered_map&gt;</code><br />
+<code>#include &lt;stdexcept&gt;</code><br />
+<code>#include &lt;algorithm&gt;</code><br />
+<code>#include &quot;fourdst/atomic/species.h&quot;</code><br />
+<code>#include &quot;fourdst/composition/exceptions/exceptions_composition.h&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__graph_8h.html">gridfire/engine/engine_graph.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__partitioning__trigger_8h.html">gridfire/solver/strategies/triggers/engine_partitioning_trigger.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="trigger__pprint_8h.html">gridfire/trigger/procedures/trigger_pprint.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="error__solver_8h.html">gridfire/exceptions/error_solver.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="sundials_8h.html">gridfire/utils/sundials.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="config_8h.html">gridfire/config/config.h</a>&quot;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for PointSolver.cpp:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="_point_solver_8cpp__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_c85d3e3c5052e9ad9ce18c6863244a25.html">lib</a></li><li class="navelem"><a class="el" href="dir_4fd0dc9a50f7a53e22cb356c650f915e.html">solver</a></li><li class="navelem"><a class="el" href="dir_b0553efdd4ad7f265c0580564941af0c.html">strategies</a></li><li class="navelem"><a class="el" href="_point_solver_8cpp.html">PointSolver.cpp</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/_point_solver_8cpp__incl.map b/docs/html/_point_solver_8cpp__incl.map
new file mode 100644
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-<tr id="row_0_1_11_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1KINSolSolverFailureError.html" target="_self">KINSolSolverFailureError</a></td><td class="desc">Exception for failures in the KINSOL solver </td></tr>
-<tr id="row_0_1_12_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1MissingBaseReactionError.html" target="_self">MissingBaseReactionError</a></td><td class="desc">Exception thrown when a required reaction is missing from the underlying database (e.g., REACLIB) </td></tr>
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-<tr id="row_0_1_20_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1SolverError.html" target="_self">SolverError</a></td><td class="desc">Base class for all exceptions related to solver operations </td></tr>
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-<tr id="row_0_10_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_0_10_0_" class="arrow" onclick="toggleFolder('0_10_0_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1trigger_1_1solver.html" target="_self">solver</a></td><td class="desc"></td></tr>
-<tr id="row_0_10_0_0_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span id="arr_0_10_0_0_" class="arrow" onclick="toggleFolder('0_10_0_0_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1CVODE.html" target="_self">CVODE</a></td><td class="desc"></td></tr>
-<tr id="row_0_10_0_0_0_" class="even" style="display:none;"><td class="entry"><span style="width:80px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html" target="_self">ConvergenceFailureTrigger</a></td><td class="desc"></td></tr>
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+<tr id="row_0_1_5_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_engine.html" target="_self">Engine</a></td><td class="desc">Abstract base class for a reaction network engine </td></tr>
+<tr id="row_0_1_6_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html" target="_self">EngineView</a></td><td class="desc">Abstract base class for a "view" of a reaction network engine </td></tr>
+<tr id="row_0_1_7_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html" target="_self">FileDefinedEngineView</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_8_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_0_1_8_" class="arrow" onclick="dynsection.toggleFolder('0_1_8_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" target="_self">GraphEngine</a></td><td class="desc">A reaction network engine that uses a graph-based representation </td></tr>
+<tr id="row_0_1_8_0_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html" target="_self">AtomicReverseRate</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_8_1_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1constants.html" target="_self">constants</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_8_2_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html" target="_self">PrecomputationKernelResults</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_8_3_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html" target="_self">PrecomputedReaction</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_9_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_0_1_9_" class="arrow" onclick="dynsection.toggleFolder('0_1_9_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html" target="_self">MultiscalePartitioningEngineView</a></td><td class="desc">An engine view that partitions the reaction network into multiple groups based on timescales </td></tr>
+<tr id="row_0_1_9_0_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_flux_validation_result.html" target="_self">FluxValidationResult</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_9_1_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html" target="_self">QSEGroup</a></td><td class="desc">Struct representing a QSE group </td></tr>
+<tr id="row_0_1_9_2_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span id="arr_0_1_9_2_" class="arrow" onclick="dynsection.toggleFolder('0_1_9_2_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html" target="_self">QSESolver</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_9_2_0_" class="odd" style="display:none;"><td class="entry"><span style="width:80px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html" target="_self">UserData</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_10_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html" target="_self">NetworkJacobian</a></td><td class="desc">A wrapper class for handling the network Jacobian matrix </td></tr>
+<tr id="row_0_1_11_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html" target="_self">NetworkPrimingEngineView</a></td><td class="desc">Provides a view of a <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> filtered to reactions involving a specified priming species </td></tr>
+<tr id="row_0_1_12_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" target="_self">PrimingReport</a></td><td class="desc">Captures the result of a network priming operation </td></tr>
+<tr id="row_0_1_13_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_reaction.html" target="_self">Reaction</a></td><td class="desc">Represents a single nuclear reaction from a specific data source </td></tr>
+<tr id="row_0_1_14_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html" target="_self">ReactionSet</a></td><td class="desc"></td></tr>
+<tr id="row_0_1_15_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html" target="_self">StepDerivatives</a></td><td class="desc">Structure holding derivatives and energy generation for a network step </td></tr>
+<tr id="row_0_2_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_0_2_" class="arrow" onclick="dynsection.toggleFolder('0_2_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1exceptions.html" target="_self">exceptions</a></td><td class="desc">Namespace for GridFire exception classes. All custom exceptions defined in GridFire inherit from std::exception and are organized within this namespace for clarity and modularity </td></tr>
+<tr id="row_0_2_0_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_bad_collection_error.html" target="_self">BadCollectionError</a></td><td class="desc">Exception for invalid composition collection in the engine </td></tr>
+<tr id="row_0_2_1_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_bad_r_h_s_engine_error.html" target="_self">BadRHSEngineError</a></td><td class="desc">Exception for errors in calculating the right-hand side (RHS) </td></tr>
+<tr id="row_0_2_2_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_c_v_o_d_e_solver_failure_error.html" target="_self">CVODESolverFailureError</a></td><td class="desc">Exception for failures in the CVODE solver </td></tr>
+<tr id="row_0_2_3_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_debug_exception.html" target="_self">DebugException</a></td><td class="desc">Exception class for debug-only errors </td></tr>
+<tr id="row_0_2_4_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_engine_error.html" target="_self">EngineError</a></td><td class="desc">Base class for engine-related exceptions </td></tr>
+<tr id="row_0_2_5_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_failed_to_partition_engine_error.html" target="_self">FailedToPartitionEngineError</a></td><td class="desc">Exception for failures in partitioning the engine </td></tr>
+<tr id="row_0_2_6_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_grid_fire_error.html" target="_self">GridFireError</a></td><td class="desc">Base class for GridFire exceptions </td></tr>
+<tr id="row_0_2_7_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_hashing_error.html" target="_self">HashingError</a></td><td class="desc">Exception class for hashing-related errors in GridFire </td></tr>
+<tr id="row_0_2_8_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_ill_conditioned_jacobian_error.html" target="_self">IllConditionedJacobianError</a></td><td class="desc">Exception thrown when the Jacobian matrix is ill-conditioned </td></tr>
+<tr id="row_0_2_9_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_invalid_q_s_e_solution_error.html" target="_self">InvalidQSESolutionError</a></td><td class="desc">Exception for invalid QSE solution in the engine </td></tr>
+<tr id="row_0_2_10_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_jacobian_error.html" target="_self">JacobianError</a></td><td class="desc">Base class for Jacobian-related exceptions </td></tr>
+<tr id="row_0_2_11_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_k_i_n_sol_solver_failure_error.html" target="_self">KINSolSolverFailureError</a></td><td class="desc">Exception for failures in the KINSOL solver </td></tr>
+<tr id="row_0_2_12_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_missing_base_reaction_error.html" target="_self">MissingBaseReactionError</a></td><td class="desc">Exception thrown when a required reaction is missing from the underlying database (e.g., REACLIB) </td></tr>
+<tr id="row_0_2_13_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_missing_key_reaction_error.html" target="_self">MissingKeyReactionError</a></td><td class="desc">Exception thrown when a constructed network fails to include a key reaction required by the policy </td></tr>
+<tr id="row_0_2_14_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_missing_seed_species_error.html" target="_self">MissingSeedSpeciesError</a></td><td class="desc">Exception thrown when a required seed species is not found in the initial composition </td></tr>
+<tr id="row_0_2_15_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_network_resized_error.html" target="_self">NetworkResizedError</a></td><td class="desc">Exception for errors during network resizing </td></tr>
+<tr id="row_0_2_16_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_policy_error.html" target="_self">PolicyError</a></td><td class="desc">Base class for all exceptions related to network policy operations </td></tr>
+<tr id="row_0_2_17_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_reaction_error.html" target="_self">ReactionError</a></td><td class="desc">Base class for all exceptions related to reaction operations </td></tr>
+<tr id="row_0_2_18_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_reaction_parsing_error.html" target="_self">ReactionParsingError</a></td><td class="desc"></td></tr>
+<tr id="row_0_2_19_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html" target="_self">ScratchPadError</a></td><td class="desc"></td></tr>
+<tr id="row_0_2_20_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_singular_jacobian_error.html" target="_self">SingularJacobianError</a></td><td class="desc">Exception thrown when the Jacobian matrix is singular </td></tr>
+<tr id="row_0_2_21_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_solver_error.html" target="_self">SolverError</a></td><td class="desc">Base class for all exceptions related to solver operations </td></tr>
+<tr id="row_0_2_22_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_stale_jacobian_error.html" target="_self">StaleJacobianError</a></td><td class="desc">Exception for stale Jacobian matrix access </td></tr>
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+<tr id="row_0_2_26_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_unknown_jacobian_error.html" target="_self">UnknownJacobianError</a></td><td class="desc">Exception for unknown Jacobian matrix access </td></tr>
+<tr id="row_0_2_27_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_utility_error.html" target="_self">UtilityError</a></td><td class="desc">Base class for utility-related errors in GridFire </td></tr>
+<tr id="row_0_3_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_0_3_" class="arrow" onclick="dynsection.toggleFolder('0_3_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1io.html" target="_self">io</a></td><td class="desc"></td></tr>
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+<tr id="row_0_3_0_0_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html" target="_self">PyFunctionDef</a></td><td class="desc">Structure representing a Python function definition </td></tr>
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+<tr id="row_0_3_2_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html" target="_self">NetworkFileParser</a></td><td class="desc">An abstract base class for network file parsers </td></tr>
+<tr id="row_0_3_3_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html" target="_self">SimpleReactionListFileParser</a></td><td class="desc">A parser for simple text files containing a list of reactions </td></tr>
+<tr id="row_0_4_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_0_4_" class="arrow" onclick="dynsection.toggleFolder('0_4_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1partition.html" target="_self">partition</a></td><td class="desc"></td></tr>
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+<tr id="row_0_5_2_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html" target="_self">CNOIIChainPolicy</a></td><td class="desc">CNO II Chain Policy </td></tr>
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+<tr id="row_0_5_5_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1policy_1_1_construction_results.html" target="_self">ConstructionResults</a></td><td class="desc"></td></tr>
+<tr id="row_0_5_6_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_chain_policy.html" target="_self">HotCNOChainPolicy</a></td><td class="desc">Hot CNO Chain Policy </td></tr>
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+<tr id="row_0_5_8_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html" target="_self">HotCNOIIChainPolicy</a></td><td class="desc">Hot CNO II Chain Policy </td></tr>
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+<tr id="row_0_5_15_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html" target="_self">ProtonProtonIChainPolicy</a></td><td class="desc">Proton-Proton I Chain Policy </td></tr>
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+<tr id="row_0_5_20_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html" target="_self">TripleAlphaChainPolicy</a></td><td class="desc">Triple-Alpha Chain Policy </td></tr>
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+<tr id="row_0_6_0_0_" class="even" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_bounds_error_info.html" target="_self">BoundsErrorInfo</a></td><td class="desc">Detailed bounds information for a BOUNDS_ERROR </td></tr>
+<tr id="row_0_6_0_1_" class="even" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_interpolation_error.html" target="_self">InterpolationError</a></td><td class="desc">Interpolation error with optional per-axis bounds details </td></tr>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+</div>
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+<div class="header">
+  <div class="summary">
+<a href="#nested-classes">Classes</a> &#124;
+<a href="#namespaces">Namespaces</a> &#124;
+<a href="#concepts">Concepts</a>  </div>
+  <div class="headertitle"><div class="title">blob.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Container class for managing multiple scratchpad instances.  
+<a href="#details">More...</a></p>
+<div class="textblock"><code>#include &quot;<a class="el" href="scratchpad__abstract_8h.html">gridfire/engine/scratchpads/scratchpad_abstract.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="error__scratchpad_8h.html">gridfire/exceptions/error_scratchpad.h</a>&quot;</code><br />
+<code>#include &lt;unordered_map&gt;</code><br />
+<code>#include &lt;memory&gt;</code><br />
+<code>#include &lt;expected&gt;</code><br />
+<code>#include &lt;unordered_set&gt;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for blob.h:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="blob_8h__incl.svg" width="100%" height="527"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="blob_8h__dep__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Container for managing a collection of typed scratchpad instances.  <a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="concepts" name="concepts"></a>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">concept &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html">gridfire::engine::scratch::IsScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Concept that constrains types to valid scratchpad implementations. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Container class for managing multiple scratchpad instances. </p>
+<p>This header defines the StateBlob class, which serves as a centralized registry for managing multiple scratchpad instances used by computational engines. It provides type-safe enrollment, retrieval, and cloning of scratchpads using compile-time type checking via C++20 concepts.</p>
+<dl class="section user"><dt>Purpose</dt><dd>The StateBlob provides:<ul>
+<li>A fixed-size array of scratchpad slots indexed by ScratchPadType</li>
+<li>Type-safe enrollment ensuring one instance per scratchpad type</li>
+<li>Compile-time verified retrieval with optional initialization checks</li>
+<li>Deep cloning of all enrolled scratchpads for parallel execution</li>
+<li>Status tracking for each scratchpad slot</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="blob_8h.html">gridfire/engine/scratchpads/blob.h</a>&quot;</span></div>
+<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__graph__scratchpad_8h.html">gridfire/engine/scratchpads/engine_graph_scratchpad.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="keyword">using namespace </span><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a>;</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create a StateBlob and enroll scratchpads</span></div>
+<div class="line"><a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> blob;</div>
+<div class="line">blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Retrieve a scratchpad (returns std::expected)</span></div>
+<div class="line"><span class="keyword">auto</span> result = blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#acedd28277e5c6805865a9baa3991686a">get</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line"><span class="keywordflow">if</span> (result.has_value()) {</div>
+<div class="line">    <a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = result.value();</div>
+<div class="line">    <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Retrieve with initialization check</span></div>
+<div class="line"><span class="keyword">auto</span> checked = blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#acedd28277e5c6805865a9baa3991686a">get</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>, <span class="keyword">true</span>&gt;();</div>
+<div class="line"><span class="keywordflow">if</span> (!checked.has_value()) {</div>
+<div class="line">    <span class="keywordflow">if</span> (checked.error() == <a class="code hl_enumvalue" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3">StateBlob::Error::SCRATCHPAD_NOT_INITIALIZED</a>) {</div>
+<div class="line">        <span class="comment">// Handle uninitialized scratchpad</span></div>
+<div class="line">    }</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Clone for parallel execution</span></div>
+<div class="line"><span class="keyword">auto</span> worker_blob = blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa45357f0c368d7403306452c5ea56af0">clone_structure</a>();</div>
+<div class="ttc" id="ablob_8h_html"><div class="ttname"><a href="blob_8h.html">blob.h</a></div><div class="ttdoc">Container class for managing multiple scratchpad instances.</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></div><div class="ttdoc">Container for managing a collection of typed scratchpad instances.</div><div class="ttdef"><b>Definition</b> blob.h:114</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3">gridfire::engine::scratch::StateBlob::Error::SCRATCHPAD_NOT_INITIALIZED</a></div><div class="ttdeci">@ SCRATCHPAD_NOT_INITIALIZED</div><div class="ttdoc">Scratchpad exists but is not initialized.</div><div class="ttdef"><b>Definition</b> blob.h:122</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aa06d7bb89e67c4b6fd584d8f32a251bf"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">gridfire::engine::scratch::StateBlob::enroll</a></div><div class="ttdeci">void enroll()</div><div class="ttdoc">Enroll a new scratchpad type into the blob.</div><div class="ttdef"><b>Definition</b> blob.h:196</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aa45357f0c368d7403306452c5ea56af0"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa45357f0c368d7403306452c5ea56af0">gridfire::engine::scratch::StateBlob::clone_structure</a></div><div class="ttdeci">std::unique_ptr&lt; StateBlob &gt; clone_structure() const</div><div class="ttdoc">Create a deep copy of this blob with all enrolled scratchpads.</div><div class="ttdef"><b>Definition</b> blob.h:361</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_acedd28277e5c6805865a9baa3991686a"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#acedd28277e5c6805865a9baa3991686a">gridfire::engine::scratch::StateBlob::get</a></div><div class="ttdeci">std::expected&lt; CTX *, Error &gt; get() const</div><div class="ttdoc">Retrieve a scratchpad by type.</div><div class="ttdef"><b>Definition</b> blob.h:230</div></div>
+<div class="ttc" id="aengine__graph__scratchpad_8h_html"><div class="ttname"><a href="engine__graph__scratchpad_8h.html">engine_graph_scratchpad.h</a></div><div class="ttdoc">Scratchpad implementation for the GraphEngine using CppAD automatic differentiation.</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></div><div class="ttdoc">Scratchpad for storing CppAD automatic differentiation state for GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:83</div></div>
+</div><!-- fragment --></dd></dl>
+<dl class="section user"><dt>Thread Safety</dt><dd>The StateBlob class is <b>not thread-safe</b>. Each thread should have its own StateBlob instance. Use clone_structure() to create independent copies for parallel workers. The cloned blob contains deep copies of all enrolled scratchpads.</dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AbstractScratchPad </dd>
+<dd>
+ScratchPadType </dd></dl>
+</div></div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_b0856f6b0d80ccb263b2f415c91f9e17.html">include</a></li><li class="navelem"><a class="el" href="dir_3626e0c0e3c5d7812d6b277dfa4ec364.html">gridfire</a></li><li class="navelem"><a class="el" href="dir_aff155d61c3b73b9ab7dcdc908c4d49e.html">engine</a></li><li class="navelem"><a class="el" href="dir_65a5f8f804465673712f6f1daa9f9ade.html">scratchpads</a></li><li class="navelem"><a class="el" href="blob_8h.html">blob.h</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/blob_8h.js b/docs/html/blob_8h.js
new file mode 100644
index 00000000..fea9c245
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+var blob_8h =
+[
+    [ "gridfire::engine::scratch::StateBlob", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html", "classgridfire_1_1engine_1_1scratch_1_1_state_blob" ],
+    [ "gridfire::engine::scratch::IsScratchPad", "conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html", null ]
+];
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+<!-- Node42&#45;&gt;Node9 -->
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+<!-- Node42&#45;&gt;Node21 -->
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+<!-- Node43&#45;&gt;Node18 -->
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+<!-- Node44&#45;&gt;Node8 -->
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+<!-- Node44&#45;&gt;Node9 -->
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+<!-- Node44&#45;&gt;Node43 -->
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+<!-- Node45&#45;&gt;Node43 -->
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+<!-- Node48&#45;&gt;Node7 -->
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+<!-- Node48&#45;&gt;Node10 -->
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 </div><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html">gridfire::policy::TemperatureDependentChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1policy_1_1_temperature_dependent_chain_policy_1_1_active_temp_range.html">gridfire::policy::TemperatureDependentChainPolicy::ActiveTempRange</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Struct to hold the active temperature range for the reaction chain.  <a href="structgridfire_1_1policy_1_1_temperature_dependent_chain_policy_1_1_active_temp_range.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html">gridfire::policy::ProtonProtonIIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Proton-Proton III Chain Policy.  <a href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_chain_policy.html">gridfire::policy::ProtonProtonChainPolicy</a></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1CNOIChainPolicy.html">gridfire::policy::CNOIChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_chain_policy.html">gridfire::policy::CNOIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">CNO I Chain Policy.  <a href="classgridfire_1_1policy_1_1_c_n_o_i_chain_policy.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html">gridfire::policy::CNOIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">CNO II Chain Policy.  <a href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1CNOIIIChainPolicy.html">gridfire::policy::CNOIIIChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy.html">gridfire::policy::CNOIIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">CNO III Chain Policy.  <a href="classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1CNOIVChainPolicy.html">gridfire::policy::CNOIVChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html">gridfire::policy::CNOIVChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">CNO IV Chain Policy.  <a href="classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_chain_policy.html">gridfire::policy::CNOChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">CNO Chain Policy.  <a href="classgridfire_1_1policy_1_1_c_n_o_chain_policy.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html">gridfire::policy::HotCNOIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO I Chain Policy.  <a href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html">gridfire::policy::HotCNOIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO II Chain Policy.  <a href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1HotCNOIIIChainPolicy.html">gridfire::policy::HotCNOIIIChainPolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO III Chain Policy.  <a href="classgridfire_1_1policy_1_1HotCNOIIIChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html">gridfire::policy::HotCNOIIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO III Chain Policy.  <a href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1HotCNOChainPolicy.html">gridfire::policy::HotCNOChainPolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO Chain Policy.  <a href="classgridfire_1_1policy_1_1HotCNOChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_chain_policy.html">gridfire::policy::HotCNOChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO Chain Policy.  <a href="classgridfire_1_1policy_1_1_hot_c_n_o_chain_policy.html#details">More...</a><br /></td></tr>
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-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Triple-Alpha Chain Policy.  <a href="classgridfire_1_1policy_1_1TripleAlphaChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html">gridfire::policy::TripleAlphaChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Triple-Alpha Chain Policy.  <a href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html">gridfire::policy::MainSequenceReactionChainPolicy</a></td></tr>
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 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
 Namespaces</h2></td></tr>
-<tr class="memitem:namespacegridfire" id="r_namespacegridfire"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:namespacegridfire_1_1policy" id="r_namespacegridfire_1_1policy"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Concrete implementations of ReactionChainPolicy for key stellar reaction chains. </p>
 <p>This file provides concrete policies for fundamental nuclear reaction chains, such as the Proton-Proton chain and the CNO cycle. These policies inherit from ReactionChainPolicy (see <code><a class="el" href="policy__abstract_8h.html" title="Abstract policy interfaces used to construct reaction networks (DynamicEngine) from seed compositions...">policy_abstract.h</a></code>) and provide a pre-defined set of reactions.</p>
 <p>They are typically used by higher-level NetworkPolicy implementations (e.g., <code>MainSequencePolicy</code> in <code><a class="el" href="stellar__policy_8h.html" title="High-level concrete NetworkPolicy for specific stellar environments.">stellar_policy.h</a></code>) to compose a complete set of required reactions for a particular stellar environment.</p>
-<dl class="section note"><dt>Note</dt><dd>Constructors for these policies may throw <code><a class="el" href="classgridfire_1_1exceptions_1_1MissingBaseReactionError.html" title="Exception thrown when a required reaction is missing from the underlying database (e....">gridfire::exceptions::MissingBaseReactionError</a></code> if a required reaction is not found in the underlying REACLIB database. This usually indicates an issue with the GridFire installation or the bundled reaction data. </dd></dl>
+<dl class="section note"><dt>Note</dt><dd>Constructors for these policies may throw <code><a class="el" href="classgridfire_1_1exceptions_1_1_missing_base_reaction_error.html" title="Exception thrown when a required reaction is missing from the underlying database (e....">gridfire::exceptions::MissingBaseReactionError</a></code> if a required reaction is not found in the underlying REACLIB database. This usually indicates an issue with the GridFire installation or the bundled reaction data. </dd></dl>
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+<!-- Node41&#45;&gt;Node44 -->
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+<title>Node41&#45;&gt;Node44</title>
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+<!-- Node41&#45;&gt;Node45 -->
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+<title>Node41&#45;&gt;Node45</title>
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+<!-- Node41&#45;&gt;Node48 -->
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+<title>Node41&#45;&gt;Node48</title>
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+<!-- Node43&#45;&gt;Node21 -->
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+<title>Node43&#45;&gt;Node21</title>
+<g id="a_edge68_Node000043_Node000021"><a xlink:title=" ">
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+<title>Node44&#45;&gt;Node7</title>
+<g id="a_edge72_Node000044_Node000007"><a xlink:title=" ">
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+<!-- Node44&#45;&gt;Node43 -->
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+<!-- Node45&#45;&gt;Node7 -->
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diff --git a/docs/html/class_py_dynamic_engine-members.html b/docs/html/class_py_dynamic_engine-members.html
index 32ea9a5c..f0255b61 100644
--- a/docs/html/class_py_dynamic_engine-members.html
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@@ -29,7 +29,7 @@
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,31 +105,27 @@ $(function(){initNavTree('class_py_dynamic_engine.html',''); initResizable(true)
 
 <p>This is the complete list of members for <a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a>, including all inherited members.</p>
 <table class="directory">
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-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a8facba88b6df6e016ce53a0ff3cff125">calculateMolarReactionFlow</a>(const gridfire::reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#aac1f2005c0a58befc4e01627c9357924">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a239826d90cb5db236e68230f7ac84bcb">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a298f700c647d2c3973d2a35d370c823e">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a2b1c054b250abccc2af9a7275c68df4a">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a204643754cac3cf37c550ecd32f659fe">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const gridfire::engine::SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a2066649ca11a869c054079ea12d8d0e9">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a541cf022fe3253279f8f1309c10556d7">getDepth</a>() const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a1d5143640666631501cf229bc491516e">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#afc745e7ab5da5d8b3cf916044515cd7d">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#ab4cfdca5e15957c5cef75ffa6dedeee5">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a8d34faa3d6ea804a3467979858d33535">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a95d10a7b240d543a1bc6c67ddf2dc8e0">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a2947824dca9662e113153de5c6516609">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a71678a567bb0cedd8a97aff9ceddd814">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a3dd5cf419f25e76e144af35df15a2067">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const gridfire::reaction::Reaction &amp;reaction) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a55bf19ed7534a312a36faf74753f7b14">isStale</a>(const gridfire::NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a01c0ea8802358c2cbc6d8571a145775a">calculateEpsDerivatives</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a2f723f732e9a83c24c1e654885ec7eea">calculateMolarReactionFlow</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const gridfire::reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a1331900141bb079e634151abdea075dc">calculateRHSAndEnergy</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a60445db14a6bfd0eeef7c0a62d458a60">collectComposition</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a6dc693583383d7237b3cede639b41f5f">constructStateBlob</a>(const gridfire::engine::scratch::StateBlob *blob) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a13b42a3a523e4c14e06820a43f15041b">generateJacobianMatrix</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a5a2697b43cddeef2aeb40b604a0de933">generateJacobianMatrix</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#af9c4725bfc2cc8c85c63790e2385d55b">generateJacobianMatrix</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const gridfire::engine::SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a6db6bfd45e74517f837c1b83a9919924">getMostRecentRHSCalculation</a>(gridfire::engine::scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a78d0b8501591667f8593a929a5439692">getNetworkReactions</a>(gridfire::engine::scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a75450cd1eee0d9d79b23eafbf452aa02">getNetworkSpecies</a>(gridfire::engine::scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#ae36830f13ee730dccc3a5a8b3e4d603c">getScreeningModel</a>(gridfire::engine::scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#af5f39c10cfc932d006c08e4bd1c1bcad">getSpeciesDestructionTimescales</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#abd2f90dc6bd506c2fd92045ba2a9e6cf">getSpeciesIndex</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#ac7232a79df901309c8f8b0b78788afe8">getSpeciesStatus</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a688269fb742d37ce15926ced80fa3f70">getSpeciesTimescales</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a2246382b1c98ba69cdb419bba63a6d03">m_species_cache</a></td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a61bb4b430fe740cfb2c24e5cc673e4ac">mapNetInToMolarAbundanceVector</a>(const gridfire::NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a6118af81e45d2850f7a2517891147274">primeEngine</a>(const gridfire::NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a25e52496b36d731127603c31e9dcaa97">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, gridfire::engine::BuildDepthType depth) override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#af469cba3be850d53f659ec173f0eb4e4">setNetworkReactions</a>(const gridfire::reaction::ReactionSet &amp;reactions) override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#afa3abfd612033336a656f092721c14ac">setScreeningModel</a>(gridfire::screening::ScreeningType model) override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#af8e6a8cd44f278535d7bcc9a896d6da8">update</a>(const gridfire::NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#a25d827397e97c638cd87223684effebc">primeEngine</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const gridfire::NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_dynamic_engine.html#abe31184ce7e63f7428b4a31ab39e7a8d">project</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const gridfire::NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
diff --git a/docs/html/class_py_dynamic_engine.html b/docs/html/class_py_dynamic_engine.html
index 9b4157c5..5845fda1 100644
--- a/docs/html/class_py_dynamic_engine.html
+++ b/docs/html/class_py_dynamic_engine.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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 Public Member Functions</h2></td></tr>
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-<tr class="memdesc:a2b1c054b250abccc2af9a7275c68df4a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generate the Jacobian matrix for the current state using a subset of active species.  <br /></td></tr>
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+<tr class="memdesc:ae36830f13ee730dccc3a5a8b3e4d603c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the current electron screening model.  <br /></td></tr>
+<tr class="separator:ae36830f13ee730dccc3a5a8b3e4d603c"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:abd2f90dc6bd506c2fd92045ba2a9e6cf"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the index of a species in the network.  <br /></td></tr>
+<tr class="separator:abd2f90dc6bd506c2fd92045ba2a9e6cf"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a25d827397e97c638cd87223684effebc"><td class="mdescLeft">&#160;</td><td class="mdescRight">Prime the engine with initial conditions.  <br /></td></tr>
+<tr class="separator:a25d827397e97c638cd87223684effebc"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a01c0ea8802358c2cbc6d8571a145775a" id="r_a01c0ea8802358c2cbc6d8571a145775a"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">gridfire::engine::EnergyDerivatives</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a01c0ea8802358c2cbc6d8571a145775a">calculateEpsDerivatives</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td></tr>
+<tr class="memdesc:a01c0ea8802358c2cbc6d8571a145775a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the derivatives of the energy generation rate with respect to T and rho.  <br /></td></tr>
+<tr class="separator:a01c0ea8802358c2cbc6d8571a145775a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a60445db14a6bfd0eeef7c0a62d458a60" id="r_a60445db14a6bfd0eeef7c0a62d458a60"><td class="memItemLeft" align="right" valign="top">fourdst::composition::Composition&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a60445db14a6bfd0eeef7c0a62d458a60">collectComposition</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td></tr>
+<tr class="memdesc:a60445db14a6bfd0eeef7c0a62d458a60"><td class="mdescLeft">&#160;</td><td class="mdescRight">Recursively collect composition from current engine and any sub engines if they exist.  <br /></td></tr>
+<tr class="separator:a60445db14a6bfd0eeef7c0a62d458a60"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ac7232a79df901309c8f8b0b78788afe8" id="r_ac7232a79df901309c8f8b0b78788afe8"><td class="memItemLeft" align="right" valign="top"><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">gridfire::engine::SpeciesStatus</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac7232a79df901309c8f8b0b78788afe8">getSpeciesStatus</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td></tr>
+<tr class="memdesc:ac7232a79df901309c8f8b0b78788afe8"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the status of a species in the network.  <br /></td></tr>
+<tr class="separator:ac7232a79df901309c8f8b0b78788afe8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6db6bfd45e74517f837c1b83a9919924" id="r_a6db6bfd45e74517f837c1b83a9919924"><td class="memItemLeft" align="right" valign="top">std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">gridfire::engine::StepDerivatives</a>&lt; double &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6db6bfd45e74517f837c1b83a9919924">getMostRecentRHSCalculation</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;ctx) const override</td></tr>
+<tr class="separator:a6db6bfd45e74517f837c1b83a9919924"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6dc693583383d7237b3cede639b41f5f" id="r_a6dc693583383d7237b3cede639b41f5f"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6dc693583383d7237b3cede639b41f5f">constructStateBlob</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> *blob) const override</td></tr>
+<tr class="separator:a6dc693583383d7237b3cede639b41f5f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1engine_1_1_dynamic_engine')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td></tr>
+<tr class="memitem:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine" id="r_ac87099ff654ca30a8d8224f4779e1a15"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx) const</td></tr>
+<tr class="memdesc:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the set of inactive reactions in the network.  <br /></td></tr>
+<tr class="separator:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:adc0a33fa6e9d8de3b433fef55f3a6972 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine" id="r_adc0a33fa6e9d8de3b433fef55f3a6972"><td class="memItemLeft" align="right" valign="top">virtual double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td></tr>
+<tr class="separator:adc0a33fa6e9d8de3b433fef55f3a6972 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="inherit_header pub_methods_classgridfire_1_1engine_1_1_engine"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1engine_1_1_engine')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td></tr>
 <tr class="memitem:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_af0ea99416c28933d364a872fc6aff556"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a> ()=default</td></tr>
 <tr class="memdesc:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
@@ -204,8 +190,8 @@ Private Attributes</h2></td></tr>
 <tr class="separator:a2246382b1c98ba69cdb419bba63a6d03"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a6832a7898da51017a20f578e33cba729" name="a6832a7898da51017a20f578e33cba729"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6832a7898da51017a20f578e33cba729">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
+<a id="a01c0ea8802358c2cbc6d8571a145775a" name="a01c0ea8802358c2cbc6d8571a145775a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a01c0ea8802358c2cbc6d8571a145775a">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -216,6 +202,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">gridfire::engine::EnergyDerivatives</a> PyDynamicEngine::calculateEpsDerivatives </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -248,12 +239,12 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>EnergyDerivatives containing dEps/dT and dEps/dRho.</dd></dl>
 <p>This method computes the partial derivatives of the specific nuclear energy generation rate with respect to temperature and density for the current state. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ada6a1295a92c2aede841672ecae0cede">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a3fd5d4f3c58d1790b7a517b5ef888eaf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a8facba88b6df6e016ce53a0ff3cff125" name="a8facba88b6df6e016ce53a0ff3cff125"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8facba88b6df6e016ce53a0ff3cff125">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
+<a id="a2f723f732e9a83c24c1e654885ec7eea" name="a2f723f732e9a83c24c1e654885ec7eea"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2f723f732e9a83c24c1e654885ec7eea">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -264,6 +255,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">double PyDynamicEngine::calculateMolarReactionFlow </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
         </tr>
         <tr>
@@ -292,6 +288,7 @@ Private Attributes</h2></td></tr>
 <p>Calculate the molar reaction flow for a given reaction. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">reaction</td><td>The reaction for which to calculate the flow. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -302,12 +299,12 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>Molar flow rate for the reaction (e.g., mol/g/s).</dd></dl>
 <p>This method computes the net rate at which the given reaction proceeds under the current state. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa57fa5e58b98a03fba31bcddda8001d4">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#abf0f13b9eae66da6119e6fca826379e8">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="aac1f2005c0a58befc4e01627c9357924" name="aac1f2005c0a58befc4e01627c9357924"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aac1f2005c0a58befc4e01627c9357924">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
+<a id="a1331900141bb079e634151abdea075dc" name="a1331900141bb079e634151abdea075dc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1331900141bb079e634151abdea075dc">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -318,6 +315,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">gridfire::engine::StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a> &gt; PyDynamicEngine::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em></em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -328,7 +330,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -344,18 +351,19 @@ Private Attributes</h2></td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td>If true, indicates that the engine should trust the passed composition has already been collected. </td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>expected&lt;StepDerivatives&lt;double&gt;&gt; containing either dY/dt and energy generation rate or a stale engine error indicating that the engine must be updated</dd></dl>
 <p>This function must be implemented by derived classes to compute the time derivatives of all species and the specific nuclear energy generation rate for the current state. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>.</p>
 
 </div>
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-<a id="a239826d90cb5db236e68230f7ac84bcb" name="a239826d90cb5db236e68230f7ac84bcb"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a239826d90cb5db236e68230f7ac84bcb">&#9670;&#160;</a></span>collectComposition()</h2>
+<a id="a60445db14a6bfd0eeef7c0a62d458a60" name="a60445db14a6bfd0eeef7c0a62d458a60"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a60445db14a6bfd0eeef7c0a62d458a60">&#9670;&#160;</a></span>collectComposition()</h2>
 
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@@ -366,6 +374,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">fourdst::composition::Composition PyDynamicEngine::collectComposition </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -392,6 +405,7 @@ Private Attributes</h2></td></tr>
 These methods return an unfinalized composition which must then be finalized by the caller </dd></dl>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Input composition to "normalize". </td></tr>
     <tr><td class="paramname">T9</td><td></td></tr>
     <tr><td class="paramname">rho</td><td></td></tr>
@@ -400,12 +414,39 @@ These methods return an unfinalized composition which must then be finalized by
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>An updated composition which is a superset of comp. This may contain species which were culled, for example, by either QSE partitioning or reaction flow rate culling </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a41877719ae5e8de53c1692c7cf9bfbfc">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#a298f700c647d2c3973d2a35d370c823e">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
+<a id="a6dc693583383d7237b3cede639b41f5f" name="a6dc693583383d7237b3cede639b41f5f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6dc693583383d7237b3cede639b41f5f">&#9670;&#160;</a></span>constructStateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &gt; PyDynamicEngine::constructStateBlob </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> *</td>          <td class="paramname"><span class="paramname"><em>blob</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="a13b42a3a523e4c14e06820a43f15041b" name="a13b42a3a523e4c14e06820a43f15041b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a13b42a3a523e4c14e06820a43f15041b">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -416,6 +457,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">gridfire::engine::NetworkJacobian</a> PyDynamicEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -439,6 +485,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Generate the Jacobian matrix for the current state. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3.</td></tr>
@@ -447,12 +494,12 @@ These methods return an unfinalized composition which must then be finalized by
 </dl>
 <p>This method must compute and store the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state. The matrix can then be accessed via getJacobianMatrixEntry(). </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a53276f09346b531f8676db355e1219eb">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab6d95491f017feb4c43d9fa05739fcd0">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a204643754cac3cf37c550ecd32f659fe" name="a204643754cac3cf37c550ecd32f659fe"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a204643754cac3cf37c550ecd32f659fe">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
+<a id="af9c4725bfc2cc8c85c63790e2385d55b" name="af9c4725bfc2cc8c85c63790e2385d55b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af9c4725bfc2cc8c85c63790e2385d55b">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -463,6 +510,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">gridfire::engine::NetworkJacobian</a> PyDynamicEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -491,6 +543,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Generate the Jacobian matrix for the current state with a specified sparsity pattern. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>Get the scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -501,12 +554,12 @@ These methods return an unfinalized composition which must then be finalized by
 <p>This method must compute and store the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state using automatic differentiation, taking into account the provided sparsity pattern. The matrix can then be accessed via <code>getJacobianMatrixEntry()</code>.</p>
 <dl class="section see"><dt>See also</dt><dd>getJacobianMatrixEntry() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a51d55a21be28e372021b2b8e5ecdc551">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a78f7b315bfa0a1f34d8fd5ab652b6934">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a2b1c054b250abccc2af9a7275c68df4a" name="a2b1c054b250abccc2af9a7275c68df4a"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2b1c054b250abccc2af9a7275c68df4a">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
+<a id="a5a2697b43cddeef2aeb40b604a0de933" name="a5a2697b43cddeef2aeb40b604a0de933"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5a2697b43cddeef2aeb40b604a0de933">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -517,6 +570,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">gridfire::engine::NetworkJacobian</a> PyDynamicEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -545,6 +603,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Generate the Jacobian matrix for the current state using a subset of active species. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -554,12 +613,12 @@ These methods return an unfinalized composition which must then be finalized by
 </dl>
 <p>This method must compute and store the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state, considering only the specified subset of active species. The matrix can then be accessed via getJacobianMatrixEntry(). </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a15d53dac8b622a3b7d0f928a3995dbde">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a983551b5fef4610799c062cb5be2b1c7">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a2066649ca11a869c054079ea12d8d0e9" name="a2066649ca11a869c054079ea12d8d0e9"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2066649ca11a869c054079ea12d8d0e9">&#9670;&#160;</a></span>generateStoichiometryMatrix()</h2>
+<a id="a6db6bfd45e74517f837c1b83a9919924" name="a6db6bfd45e74517f837c1b83a9919924"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6db6bfd45e74517f837c1b83a9919924">&#9670;&#160;</a></span>getMostRecentRHSCalculation()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -568,10 +627,10 @@ These methods return an unfinalized composition which must then be finalized by
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">void PyDynamicEngine::generateStoichiometryMatrix </td>
+          <td class="memname">std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">gridfire::engine::StepDerivatives</a>&lt; double &gt; &gt; PyDynamicEngine::getMostRecentRHSCalculation </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td></td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
         </tr>
       </table>
   </td>
@@ -581,46 +640,12 @@ These methods return an unfinalized composition which must then be finalized by
 </table>
 </div><div class="memdoc">
 
-<p>Generate the stoichiometry matrix for the network. </p>
-<p>This method must compute and store the stoichiometry matrix, which encodes the net change of each species in each reaction. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5e2c45a3e415b53e41def8f743f93464">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30cc7809d53540bd3407d971de8eec48">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a541cf022fe3253279f8f1309c10556d7" name="a541cf022fe3253279f8f1309c10556d7"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a541cf022fe3253279f8f1309c10556d7">&#9670;&#160;</a></span>getDepth()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">gridfire::engine::BuildDepthType</a> PyDynamicEngine::getDepth </td>
-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Get the depth of the network. </p>
-<dl class="section return"><dt>Returns</dt><dd>The depth of the network, which may indicate the level of detail or complexity in the reaction network.</dd></dl>
-<p>This method is intended to provide information about the network's structure, such as how many layers of reactions or species are present. It can be useful for diagnostics and understanding the network's complexity. </p>
-
-<p>Reimplemented from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac5a0def6b6af0bd93bf9057c25f048ff">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a1d5143640666631501cf229bc491516e" name="a1d5143640666631501cf229bc491516e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a1d5143640666631501cf229bc491516e">&#9670;&#160;</a></span>getNetworkReactions()</h2>
+<a id="a78d0b8501591667f8593a929a5439692" name="a78d0b8501591667f8593a929a5439692"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a78d0b8501591667f8593a929a5439692">&#9670;&#160;</a></span>getNetworkReactions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -631,7 +656,7 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a> &amp; PyDynamicEngine::getNetworkReactions </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -645,12 +670,12 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Get the set of logical reactions in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>Reference to the LogicalReactionSet containing all reactions. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a26b59a4c7622bf820c0eeec6a7522aa8">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a77a889cbc3791beca4abb95cb663a4d6">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="afc745e7ab5da5d8b3cf916044515cd7d" name="afc745e7ab5da5d8b3cf916044515cd7d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#afc745e7ab5da5d8b3cf916044515cd7d">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
+<a id="a75450cd1eee0d9d79b23eafbf452aa02" name="a75450cd1eee0d9d79b23eafbf452aa02"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a75450cd1eee0d9d79b23eafbf452aa02">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -661,7 +686,7 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">const std::vector&lt; fourdst::atomic::Species &gt; &amp; PyDynamicEngine::getNetworkSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -674,12 +699,12 @@ These methods return an unfinalized composition which must then be finalized by
 
 <p><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a> Implementation ///. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">gridfire::engine::Engine</a>.</p>
 
 </div>
 </div>
-<a id="ab4cfdca5e15957c5cef75ffa6dedeee5" name="ab4cfdca5e15957c5cef75ffa6dedeee5"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ab4cfdca5e15957c5cef75ffa6dedeee5">&#9670;&#160;</a></span>getScreeningModel()</h2>
+<a id="ae36830f13ee730dccc3a5a8b3e4d603c" name="ae36830f13ee730dccc3a5a8b3e4d603c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae36830f13ee730dccc3a5a8b3e4d603c">&#9670;&#160;</a></span>getScreeningModel()</h2>
 
 <div class="memitem">
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@@ -690,7 +715,7 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">gridfire::screening::ScreeningType</a> PyDynamicEngine::getScreeningModel </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -702,16 +727,22 @@ These methods return an unfinalized composition which must then be finalized by
 </div><div class="memdoc">
 
 <p>Get the current electron screening model. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state.</td></tr>
+  </table>
+  </dd>
+</dl>
 <dl class="section return"><dt>Returns</dt><dd>The currently active screening model type.</dd></dl>
 <dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line">screening::ScreeningType currentModel = myEngine.getScreeningModel();</div>
 </div><!-- fragment --> </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a24103027a38e02d4342161164554d332">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a60834e4bcfb2e4ec21a9cbf7bb9f7363">gridfire::engine::DynamicEngine</a>.</p>
 
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-<a id="a8d34faa3d6ea804a3467979858d33535" name="a8d34faa3d6ea804a3467979858d33535"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8d34faa3d6ea804a3467979858d33535">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
+<a id="af5f39c10cfc932d006c08e4bd1c1bcad" name="af5f39c10cfc932d006c08e4bd1c1bcad"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af5f39c10cfc932d006c08e4bd1c1bcad">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
 
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@@ -722,6 +753,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a> &gt; PyDynamicEngine::getSpeciesDestructionTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -745,6 +781,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Compute destruction timescales for all species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -754,12 +791,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd>Map from Species to their destruction timescales (s).</dd></dl>
 <p>This method estimates the destruction timescale for each species, which can be useful for understanding reaction flows and equilibrium states. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aefc5d0f7842b27a108ba1e4ca346e9a0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a128dd0a7f738f93092c437eeda983fdf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a95d10a7b240d543a1bc6c67ddf2dc8e0" name="a95d10a7b240d543a1bc6c67ddf2dc8e0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a95d10a7b240d543a1bc6c67ddf2dc8e0">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
+<a id="abd2f90dc6bd506c2fd92045ba2a9e6cf" name="abd2f90dc6bd506c2fd92045ba2a9e6cf"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abd2f90dc6bd506c2fd92045ba2a9e6cf">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -770,8 +807,12 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">size_t PyDynamicEngine::getSpeciesIndex </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -784,18 +825,19 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Get the index of a species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">species</td><td>The species to look up.</td></tr>
   </table>
   </dd>
 </dl>
 <p>This method allows querying the index of a specific species in the engine's internal representation. It is useful for accessing species data efficiently. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac0f40017603e8e6887b75dc7360d7c5e">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a16bd2fae51fa738da62f2a767f6875d2">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a2947824dca9662e113153de5c6516609" name="a2947824dca9662e113153de5c6516609"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2947824dca9662e113153de5c6516609">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
+<a id="ac7232a79df901309c8f8b0b78788afe8" name="ac7232a79df901309c8f8b0b78788afe8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac7232a79df901309c8f8b0b78788afe8">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -806,8 +848,12 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">gridfire::engine::SpeciesStatus</a> PyDynamicEngine::getSpeciesStatus </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -827,12 +873,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd>SpeciesStatus indicating whether the species is active, inactive, or culled.</dd></dl>
 <p>This method allows querying the current status of a specific species within the engine's network. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8aebefad50c1aa34207e118e92d7ccf0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a1fefd34491959f9936b7a065fc2d6274">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a71678a567bb0cedd8a97aff9ceddd814" name="a71678a567bb0cedd8a97aff9ceddd814"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a71678a567bb0cedd8a97aff9ceddd814">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
+<a id="a688269fb742d37ce15926ced80fa3f70" name="a688269fb742d37ce15926ced80fa3f70"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a688269fb742d37ce15926ced80fa3f70">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -843,6 +889,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a> &gt; PyDynamicEngine::getSpeciesTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -875,133 +926,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd>Map from Species to their characteristic timescales (s).</dd></dl>
 <p>This method estimates the timescale for abundance change of each species, which can be used for timestep control, diagnostics, and reaction network culling. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aef6ed91d922c0b1733fd7835e99d0efe">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a92be21f072b61fcf291559246045801f">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a3dd5cf419f25e76e144af35df15a2067" name="a3dd5cf419f25e76e144af35df15a2067"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a3dd5cf419f25e76e144af35df15a2067">&#9670;&#160;</a></span>getStoichiometryMatrixEntry()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">int PyDynamicEngine::getStoichiometryMatrixEntry </td>
-          <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Get an entry from the stoichiometry matrix. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">species</td><td>species to look up stoichiometry for. </td></tr>
-    <tr><td class="paramname">reaction</td><td>reaction to find </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>Stoichiometric coefficient for the species in the reaction.</dd></dl>
-<p>The stoichiometry matrix must have been generated by <a class="el" href="#a2066649ca11a869c054079ea12d8d0e9" title="Generate the stoichiometry matrix for the network.">generateStoichiometryMatrix()</a>. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a55bf19ed7534a312a36faf74753f7b14" name="a55bf19ed7534a312a36faf74753f7b14"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a55bf19ed7534a312a36faf74753f7b14">&#9670;&#160;</a></span>isStale()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">bool PyDynamicEngine::isStale </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Check if the engine's internal state is stale. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>A struct containing the current network input, such as temperature, density, and composition. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>True if the engine's state is stale and needs to be updated; false otherwise.</dd></dl>
-<p>This method allows derived classes to determine if their internal state is out-of-date with respect to the provided network conditions. If the engine is stale, it may require a call to <code><a class="el" href="#af8e6a8cd44f278535d7bcc9a896d6da8" title="Update the internal state of the engine.">update()</a></code> before performing calculations.</p>
-<dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line">NetIn input = { ... };</div>
-<div class="line"><span class="keywordflow">if</span> (myEngine.isStale(input)) {</div>
-<div class="line">    <span class="comment">// Update the engine before proceeding</span></div>
-<div class="line">}</div>
-</div><!-- fragment --> </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a79423b9f67b4cac702547b4f1d8bd14c">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a61bb4b430fe740cfb2c24e5cc673e4ac" name="a61bb4b430fe740cfb2c24e5cc673e4ac"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a61bb4b430fe740cfb2c24e5cc673e4ac">&#9670;&#160;</a></span>mapNetInToMolarAbundanceVector()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">std::vector&lt; double &gt; PyDynamicEngine::mapNetInToMolarAbundanceVector </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Map a NetIn object to a vector of molar abundances. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The input conditions for the network. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>A vector of molar abundances corresponding to the species in the network.</dd></dl>
-<p>This method converts the input conditions into a vector of molar abundances, which can be used for further calculations or diagnostics. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa9d55b81c1963113aad86aa60c19676f">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a6118af81e45d2850f7a2517891147274" name="a6118af81e45d2850f7a2517891147274"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6118af81e45d2850f7a2517891147274">&#9670;&#160;</a></span>primeEngine()</h2>
+<a id="a25d827397e97c638cd87223684effebc" name="a25d827397e97c638cd87223684effebc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a25d827397e97c638cd87223684effebc">&#9670;&#160;</a></span>primeEngine()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1012,8 +942,12 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">gridfire::engine::PrimingReport</a> PyDynamicEngine::primeEngine </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1026,6 +960,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Prime the engine with initial conditions. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">netIn</td><td>The input conditions for the network. </td></tr>
   </table>
   </dd>
@@ -1033,12 +968,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd>PrimingReport containing information about the priming process.</dd></dl>
 <p>This method is used to prepare the engine for calculations by setting up initial conditions, reactions, and species. It may involve compiling reaction rates, initializing internal data structures, and performing any necessary pre-computation. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a70e270bb50910c0055a75575c1ef1e95">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30df09678c3de1a55b7c6ac5eae35004">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a25e52496b36d731127603c31e9dcaa97" name="a25e52496b36d731127603c31e9dcaa97"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a25e52496b36d731127603c31e9dcaa97">&#9670;&#160;</a></span>rebuild()</h2>
+<a id="abe31184ce7e63f7428b4a31ab39e7a8d" name="abe31184ce7e63f7428b4a31ab39e7a8d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abe31184ce7e63f7428b4a31ab39e7a8d">&#9670;&#160;</a></span>project()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1047,51 +982,14 @@ These methods return an unfinalized composition which must then be finalized by
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">void PyDynamicEngine::rebuild </td>
+          <td class="memname">fourdst::composition::Composition PyDynamicEngine::project </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">gridfire::engine::BuildDepthType</a></td>          <td class="paramname"><span class="paramname"><em>depth</em></span>&#160;)</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Rebuild the network with a specified depth. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">comp</td><td>The composition to rebuild the network with. </td></tr>
-    <tr><td class="paramname">depth</td><td>The desired depth of the network.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method is intended to allow dynamic adjustment of the network's depth, which may involve adding or removing species and reactions based on the specified depth. However, not all engines support this operation. </p>
-
-<p>Reimplemented from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="af469cba3be850d53f659ec173f0eb4e4" name="af469cba3be850d53f659ec173f0eb4e4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#af469cba3be850d53f659ec173f0eb4e4">&#9670;&#160;</a></span>setNetworkReactions()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void PyDynamicEngine::setNetworkReactions </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
-          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1101,84 +999,10 @@ These methods return an unfinalized composition which must then be finalized by
 </table>
 </div><div class="memdoc">
 
-<p>Set the reactions for the network. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">reactions</td><td>The set of reactions to use in the network.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method replaces the current set of reactions in the network with the provided set. It marks the engine as stale, requiring regeneration of matrices and recalculation of rates. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab321170954bffc53b1bedaf54f6976be">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="afa3abfd612033336a656f092721c14ac" name="afa3abfd612033336a656f092721c14ac"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#afa3abfd612033336a656f092721c14ac">&#9670;&#160;</a></span>setScreeningModel()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void PyDynamicEngine::setScreeningModel </td>
-          <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">gridfire::screening::ScreeningType</a></td>          <td class="paramname"><span class="paramname"><em>model</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Set the electron screening model. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">model</td><td>The type of screening model to use for reaction rate calculations.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method allows changing the screening model at runtime. Screening corrections account for the electrostatic shielding of nuclei by electrons, which affects reaction rates in dense stellar plasmas.</p>
-<dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line">myEngine.setScreeningModel(screening::ScreeningType::WEAK);</div>
-</div><!-- fragment --></dd></dl>
-<dl class="section post"><dt>Postcondition</dt><dd>The engine will use the specified screening model for subsequent rate calculations. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a50e76977d0dc3cc23d52b51842d35003">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="af8e6a8cd44f278535d7bcc9a896d6da8" name="af8e6a8cd44f278535d7bcc9a896d6da8"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#af8e6a8cd44f278535d7bcc9a896d6da8">&#9670;&#160;</a></span>update()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">fourdst::composition::Composition PyDynamicEngine::update </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Update the internal state of the engine. </p>
+<p>Update the thread local scratch pad state of a network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">netIn</td><td>A struct containing the current network input, such as temperature, density, and composition.</td></tr>
   </table>
   </dd>
@@ -1189,7 +1013,7 @@ These methods return an unfinalized composition which must then be finalized by
 </div><!-- fragment --></dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>The internal state of the engine is updated to reflect the new conditions. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8dd85442ec54f20d91743c72364e36ff">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a260d36cc1e14ca8eda0309745e9134d9">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
diff --git a/docs/html/class_py_dynamic_engine.js b/docs/html/class_py_dynamic_engine.js
index 6266fc97..fd1c3e1e 100644
--- a/docs/html/class_py_dynamic_engine.js
+++ b/docs/html/class_py_dynamic_engine.js
@@ -1,28 +1,22 @@
 var class_py_dynamic_engine =
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-    [ "calculateEpsDerivatives", "class_py_dynamic_engine.html#a6832a7898da51017a20f578e33cba729", null ],
-    [ "calculateMolarReactionFlow", "class_py_dynamic_engine.html#a8facba88b6df6e016ce53a0ff3cff125", null ],
-    [ "calculateRHSAndEnergy", "class_py_dynamic_engine.html#aac1f2005c0a58befc4e01627c9357924", null ],
-    [ "collectComposition", "class_py_dynamic_engine.html#a239826d90cb5db236e68230f7ac84bcb", null ],
-    [ "generateJacobianMatrix", "class_py_dynamic_engine.html#a298f700c647d2c3973d2a35d370c823e", null ],
-    [ "generateJacobianMatrix", "class_py_dynamic_engine.html#a204643754cac3cf37c550ecd32f659fe", null ],
-    [ "generateJacobianMatrix", "class_py_dynamic_engine.html#a2b1c054b250abccc2af9a7275c68df4a", null ],
-    [ "generateStoichiometryMatrix", "class_py_dynamic_engine.html#a2066649ca11a869c054079ea12d8d0e9", null ],
-    [ "getDepth", "class_py_dynamic_engine.html#a541cf022fe3253279f8f1309c10556d7", null ],
-    [ "getNetworkReactions", "class_py_dynamic_engine.html#a1d5143640666631501cf229bc491516e", null ],
-    [ "getNetworkSpecies", "class_py_dynamic_engine.html#afc745e7ab5da5d8b3cf916044515cd7d", null ],
-    [ "getScreeningModel", "class_py_dynamic_engine.html#ab4cfdca5e15957c5cef75ffa6dedeee5", null ],
-    [ "getSpeciesDestructionTimescales", "class_py_dynamic_engine.html#a8d34faa3d6ea804a3467979858d33535", null ],
-    [ "getSpeciesIndex", "class_py_dynamic_engine.html#a95d10a7b240d543a1bc6c67ddf2dc8e0", null ],
-    [ "getSpeciesStatus", "class_py_dynamic_engine.html#a2947824dca9662e113153de5c6516609", null ],
-    [ "getSpeciesTimescales", "class_py_dynamic_engine.html#a71678a567bb0cedd8a97aff9ceddd814", null ],
-    [ "getStoichiometryMatrixEntry", "class_py_dynamic_engine.html#a3dd5cf419f25e76e144af35df15a2067", null ],
-    [ "isStale", "class_py_dynamic_engine.html#a55bf19ed7534a312a36faf74753f7b14", null ],
-    [ "mapNetInToMolarAbundanceVector", "class_py_dynamic_engine.html#a61bb4b430fe740cfb2c24e5cc673e4ac", null ],
-    [ "primeEngine", "class_py_dynamic_engine.html#a6118af81e45d2850f7a2517891147274", null ],
-    [ "rebuild", "class_py_dynamic_engine.html#a25e52496b36d731127603c31e9dcaa97", null ],
-    [ "setNetworkReactions", "class_py_dynamic_engine.html#af469cba3be850d53f659ec173f0eb4e4", null ],
-    [ "setScreeningModel", "class_py_dynamic_engine.html#afa3abfd612033336a656f092721c14ac", null ],
-    [ "update", "class_py_dynamic_engine.html#af8e6a8cd44f278535d7bcc9a896d6da8", null ],
+    [ "calculateEpsDerivatives", "class_py_dynamic_engine.html#a01c0ea8802358c2cbc6d8571a145775a", null ],
+    [ "calculateMolarReactionFlow", "class_py_dynamic_engine.html#a2f723f732e9a83c24c1e654885ec7eea", null ],
+    [ "calculateRHSAndEnergy", "class_py_dynamic_engine.html#a1331900141bb079e634151abdea075dc", null ],
+    [ "collectComposition", "class_py_dynamic_engine.html#a60445db14a6bfd0eeef7c0a62d458a60", null ],
+    [ "constructStateBlob", "class_py_dynamic_engine.html#a6dc693583383d7237b3cede639b41f5f", null ],
+    [ "generateJacobianMatrix", "class_py_dynamic_engine.html#a13b42a3a523e4c14e06820a43f15041b", null ],
+    [ "generateJacobianMatrix", "class_py_dynamic_engine.html#af9c4725bfc2cc8c85c63790e2385d55b", null ],
+    [ "generateJacobianMatrix", "class_py_dynamic_engine.html#a5a2697b43cddeef2aeb40b604a0de933", null ],
+    [ "getMostRecentRHSCalculation", "class_py_dynamic_engine.html#a6db6bfd45e74517f837c1b83a9919924", null ],
+    [ "getNetworkReactions", "class_py_dynamic_engine.html#a78d0b8501591667f8593a929a5439692", null ],
+    [ "getNetworkSpecies", "class_py_dynamic_engine.html#a75450cd1eee0d9d79b23eafbf452aa02", null ],
+    [ "getScreeningModel", "class_py_dynamic_engine.html#ae36830f13ee730dccc3a5a8b3e4d603c", null ],
+    [ "getSpeciesDestructionTimescales", "class_py_dynamic_engine.html#af5f39c10cfc932d006c08e4bd1c1bcad", null ],
+    [ "getSpeciesIndex", "class_py_dynamic_engine.html#abd2f90dc6bd506c2fd92045ba2a9e6cf", null ],
+    [ "getSpeciesStatus", "class_py_dynamic_engine.html#ac7232a79df901309c8f8b0b78788afe8", null ],
+    [ "getSpeciesTimescales", "class_py_dynamic_engine.html#a688269fb742d37ce15926ced80fa3f70", null ],
+    [ "primeEngine", "class_py_dynamic_engine.html#a25d827397e97c638cd87223684effebc", null ],
+    [ "project", "class_py_dynamic_engine.html#abe31184ce7e63f7428b4a31ab39e7a8d", null ],
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diff --git a/docs/html/class_py_dynamic_engine_view-members.html b/docs/html/class_py_dynamic_engine_view-members.html
index 5be83884..57f63778 100644
--- a/docs/html/class_py_dynamic_engine_view-members.html
+++ b/docs/html/class_py_dynamic_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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index 2cb6e226..83e4113f 100644
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+++ b/docs/html/class_py_dynamic_engine_view.html
@@ -29,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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diff --git a/docs/html/class_py_engine-members.html b/docs/html/class_py_engine-members.html
index 036e4938..bc1a9504 100644
--- a/docs/html/class_py_engine-members.html
+++ b/docs/html/class_py_engine-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,8 +105,8 @@ $(function(){initNavTree('class_py_engine.html',''); initResizable(true); });
 
 <p>This is the complete list of members for <a class="el" href="class_py_engine.html">PyEngine</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="class_py_engine.html#abc26a86d4f93b37564d32814edbbac4d">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="class_py_engine.html">PyEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="class_py_engine.html#a2d240423899e039c2ca688e96f8af1f2">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="class_py_engine.html">PyEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_engine.html#a63a2605b8d742d284924db397338da0b">calculateRHSAndEnergy</a>(gridfire::engine::scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="class_py_engine.html">PyEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_engine.html#a5daac50566c2a15c65b8f94b1758b04e">getNetworkSpecies</a>(gridfire::engine::scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="class_py_engine.html">PyEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
diff --git a/docs/html/class_py_engine.html b/docs/html/class_py_engine.html
index 406a6469..89096eaf 100644
--- a/docs/html/class_py_engine.html
+++ b/docs/html/class_py_engine.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -121,12 +121,12 @@ Collaboration diagram for PyEngine:</div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
 Public Member Functions</h2></td></tr>
-<tr class="memitem:a2d240423899e039c2ca688e96f8af1f2" id="r_a2d240423899e039c2ca688e96f8af1f2"><td class="memItemLeft" align="right" valign="top">const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2d240423899e039c2ca688e96f8af1f2">getNetworkSpecies</a> () const override</td></tr>
-<tr class="memdesc:a2d240423899e039c2ca688e96f8af1f2"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the list of species in the network.  <br /></td></tr>
-<tr class="separator:a2d240423899e039c2ca688e96f8af1f2"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:abc26a86d4f93b37564d32814edbbac4d" id="r_abc26a86d4f93b37564d32814edbbac4d"><td class="memItemLeft" align="right" valign="top">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">gridfire::engine::StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#abc26a86d4f93b37564d32814edbbac4d">calculateRHSAndEnergy</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td></tr>
-<tr class="memdesc:abc26a86d4f93b37564d32814edbbac4d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the right-hand side (dY/dt) and energy generation.  <br /></td></tr>
-<tr class="separator:abc26a86d4f93b37564d32814edbbac4d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a5daac50566c2a15c65b8f94b1758b04e" id="r_a5daac50566c2a15c65b8f94b1758b04e"><td class="memItemLeft" align="right" valign="top">const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5daac50566c2a15c65b8f94b1758b04e">getNetworkSpecies</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;ctx) const override</td></tr>
+<tr class="memdesc:a5daac50566c2a15c65b8f94b1758b04e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the list of species in the network.  <br /></td></tr>
+<tr class="separator:a5daac50566c2a15c65b8f94b1758b04e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a63a2605b8d742d284924db397338da0b" id="r_a63a2605b8d742d284924db397338da0b"><td class="memItemLeft" align="right" valign="top">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">gridfire::engine::StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a63a2605b8d742d284924db397338da0b">calculateRHSAndEnergy</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td></tr>
+<tr class="memdesc:a63a2605b8d742d284924db397338da0b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the right-hand side (dY/dt) and energy generation.  <br /></td></tr>
+<tr class="separator:a63a2605b8d742d284924db397338da0b"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="inherit_header pub_methods_classgridfire_1_1engine_1_1_engine"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1engine_1_1_engine')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td></tr>
 <tr class="memitem:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_af0ea99416c28933d364a872fc6aff556"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a> ()=default</td></tr>
 <tr class="memdesc:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
@@ -138,8 +138,8 @@ Private Attributes</h2></td></tr>
 <tr class="separator:a73caaa7606e2cdfd1aa82729a78ebb73"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="abc26a86d4f93b37564d32814edbbac4d" name="abc26a86d4f93b37564d32814edbbac4d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#abc26a86d4f93b37564d32814edbbac4d">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
+<a id="a63a2605b8d742d284924db397338da0b" name="a63a2605b8d742d284924db397338da0b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a63a2605b8d742d284924db397338da0b">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -150,6 +150,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">gridfire::engine::StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a> &gt; PyEngine::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em></em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -160,7 +165,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -176,18 +186,19 @@ Private Attributes</h2></td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td>If true, indicates that the engine should trust the passed composition has already been collected. </td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>expected&lt;StepDerivatives&lt;double&gt;&gt; containing either dY/dt and energy generation rate or a stale engine error indicating that the engine must be updated</dd></dl>
 <p>This function must be implemented by derived classes to compute the time derivatives of all species and the specific nuclear energy generation rate for the current state. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>.</p>
 
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         <tr>
           <td class="memname">const std::vector&lt; fourdst::atomic::Species &gt; &amp; PyEngine::getNetworkSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -212,7 +223,7 @@ Private Attributes</h2></td></tr>
 <p>Get the list of species in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>Vector of Species objects representing all network species. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">gridfire::engine::Engine</a>.</p>
 
 </div>
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index 6929e88a..8d4e7c7d 100644
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 var class_py_engine =
 [
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-    [ "getNetworkSpecies", "class_py_engine.html#a2d240423899e039c2ca688e96f8af1f2", null ],
+    [ "calculateRHSAndEnergy", "class_py_engine.html#a63a2605b8d742d284924db397338da0b", null ],
+    [ "getNetworkSpecies", "class_py_engine.html#a5daac50566c2a15c65b8f94b1758b04e", null ],
     [ "m_species_cache", "class_py_engine.html#a73caaa7606e2cdfd1aa82729a78ebb73", null ]
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\ No newline at end of file
diff --git a/docs/html/class_py_engine_view-members.html b/docs/html/class_py_engine_view-members.html
index 6d5a1190..e363a8c5 100644
--- a/docs/html/class_py_engine_view-members.html
+++ b/docs/html/class_py_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/class_py_engine_view.html b/docs/html/class_py_engine_view.html
index eaa02b71..73c020ce 100644
--- a/docs/html/class_py_engine_view.html
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@@ -29,7 +29,7 @@
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+<meta name="generator" content="Doxygen 1.13.2"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: Member List</title>
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+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+ <tbody>
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<!-- Generated by Doxygen 1.13.2 -->
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+<div id="doc-content">
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+  <div class="headertitle"><div class="title">PyMultiZoneDynamicNetworkSolver Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="class_py_multi_zone_dynamic_network_solver.html">PyMultiZoneDynamicNetworkSolver</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="class_py_multi_zone_dynamic_network_solver.html#aad0d16a83dcaee1da199e271f0cf10f0">evaluate</a>(gridfire::solver::SolverContextBase &amp;solver_ctx, const std::vector&lt; gridfire::NetIn &gt; &amp;netIns) const override</td><td class="entry"><a class="el" href="class_py_multi_zone_dynamic_network_solver.html">PyMultiZoneDynamicNetworkSolver</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a72ca011952a904c0becb0067c369b906">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a72ca011952a904c0becb0067c369b906">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a0c1c9d301507063b2d2b316c0696b188">m_solver</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a0c1c9d301507063b2d2b316c0696b188">m_solver</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a>(const EngineT &amp;engine, const SingleZoneNetworkSolver&lt; EngineT &gt; &amp;solver)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a>(const EngineT &amp;engine, const SingleZoneNetworkSolver&lt; EngineT &gt; &amp;solver)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_multi_zone_dynamic_network_solver.html#ad8cafdd48eb28f9087363de26b8939de">PyMultiZoneDynamicNetworkSolver</a>(const gridfire::engine::DynamicEngine &amp;engine, const gridfire::solver::SingleZoneDynamicNetworkSolver &amp;local_solver)</td><td class="entry"><a class="el" href="class_py_multi_zone_dynamic_network_solver.html">PyMultiZoneDynamicNetworkSolver</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
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+</table></div><!-- contents -->
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diff --git a/docs/html/class_py_multi_zone_dynamic_network_solver.html b/docs/html/class_py_multi_zone_dynamic_network_solver.html
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+<title>GridFire: PyMultiZoneDynamicNetworkSolver Class Reference</title>
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+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
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+</div>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
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+<div id="doc-content">
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="class_py_multi_zone_dynamic_network_solver-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">PyMultiZoneDynamicNetworkSolver Class Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;py_solver.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for PyMultiZoneDynamicNetworkSolver:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="class_py_multi_zone_dynamic_network_solver__inherit__graph.svg" width="207" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for PyMultiZoneDynamicNetworkSolver:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="class_py_multi_zone_dynamic_network_solver__coll__graph.svg" width="207" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:ad8cafdd48eb28f9087363de26b8939de" id="r_ad8cafdd48eb28f9087363de26b8939de"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad8cafdd48eb28f9087363de26b8939de">PyMultiZoneDynamicNetworkSolver</a> (const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a> &amp;engine, const <a class="el" href="namespacegridfire_1_1solver.html#a3ba32e30d3e30cbbca5ffb22dff077ee">gridfire::solver::SingleZoneDynamicNetworkSolver</a> &amp;local_solver)</td></tr>
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+<h2 class="memtitle"><span class="permalink"><a href="#ad8cafdd48eb28f9087363de26b8939de">&#9670;&#160;</a></span>PyMultiZoneDynamicNetworkSolver()</h2>
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+          <td class="memname">PyMultiZoneDynamicNetworkSolver::PyMultiZoneDynamicNetworkSolver </td>
+          <td>(</td>
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+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1solver.html#a3ba32e30d3e30cbbca5ffb22dff077ee">gridfire::solver::SingleZoneDynamicNetworkSolver</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>local_solver</em></span>&#160;)</td>
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+<h2 class="memtitle"><span class="permalink"><a href="#aad0d16a83dcaee1da199e271f0cf10f0">&#9670;&#160;</a></span>evaluate()</h2>
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+          <td class="memname">std::vector&lt; <a class="el" href="structgridfire_1_1_net_out.html">gridfire::NetOut</a> &gt; PyMultiZoneDynamicNetworkSolver::evaluate </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>solver_ctx</em></span>, </td>
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+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>netIns</em></span>&#160;) const</td>
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+<p>Implements <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#ab9f86bfb1e576a2a520bee7b205bf0d1">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a>.</p>
+
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 <table class="directory">
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+  <tr class="even"><td class="entry"><a class="el" href="class_py_network_policy.html#a685d2c695279edb3697d3552f9d3ba43">construct</a>() override</td><td class="entry"><a class="el" href="class_py_network_policy.html">PyNetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="class_py_network_policy.html#a4d38691a737afcc0ae32fa3d80824c0b">get_stack_scratch_blob</a>() const override</td><td class="entry"><a class="el" href="class_py_network_policy.html">PyNetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_network_policy.html#a8506a1f9c22d47c266abe1519ffb9bc0">get_status</a>() const override</td><td class="entry"><a class="el" href="class_py_network_policy.html">PyNetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_network_policy.html#ac2c1ef3897e6491d5ab03e7342075245">name</a>() const override</td><td class="entry"><a class="el" href="class_py_network_policy.html">PyNetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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 <tr class="inherit_header pub_methods_classgridfire_1_1policy_1_1_network_policy"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1policy_1_1_network_policy')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td></tr>
 <tr class="memitem:a0d32c22a2d3794c328e8dd24d2cda2be inherit pub_methods_classgridfire_1_1policy_1_1_network_policy" id="r_a0d32c22a2d3794c328e8dd24d2cda2be"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a0d32c22a2d3794c328e8dd24d2cda2be">~NetworkPolicy</a> ()=default</td></tr>
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 </table>
 <h2 class="groupheader">Member Function Documentation</h2>
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@@ -185,7 +187,7 @@ Public Member Functions</h2></td></tr>
 <div class="line">NetOut out = solver.evaluate(netIn, <span class="keyword">true</span>);</div>
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+<p>Implements <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a1ee276d40dfdfe1bf313b29436cbcfba">gridfire::policy::NetworkPolicy</a>.</p>
 
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+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
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+
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@@ -29,7 +29,7 @@
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index 9e8667e8..2940c955 100644
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+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+<div id="doc-content">
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+<div class="header">
+  <div class="headertitle"><div class="title">PySingleZoneDynamicNetworkSolver Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="class_py_single_zone_dynamic_network_solver.html">PySingleZoneDynamicNetworkSolver</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="class_py_single_zone_dynamic_network_solver.html#a59893f7cf809d922b6d113ed2cf96881">evaluate</a>(gridfire::solver::SolverContextBase &amp;solver_ctx, const gridfire::NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="class_py_single_zone_dynamic_network_solver.html">PySingleZoneDynamicNetworkSolver</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_single_zone_dynamic_network_solver.html#adb107930a92cf0dfd9f5ef08173b4a63">PySingleZoneDynamicNetworkSolver</a>(const gridfire::engine::DynamicEngine &amp;engine)</td><td class="entry"><a class="el" href="class_py_single_zone_dynamic_network_solver.html">PySingleZoneDynamicNetworkSolver</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
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+</div>
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+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="class_py_single_zone_dynamic_network_solver-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">PySingleZoneDynamicNetworkSolver Class Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;py_solver.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for PySingleZoneDynamicNetworkSolver:</div>
+<div class="dyncontent">
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for PySingleZoneDynamicNetworkSolver:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="class_py_single_zone_dynamic_network_solver__coll__graph.svg" width="215" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:adb107930a92cf0dfd9f5ef08173b4a63" id="r_adb107930a92cf0dfd9f5ef08173b4a63"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#adb107930a92cf0dfd9f5ef08173b4a63">PySingleZoneDynamicNetworkSolver</a> (const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a> &amp;engine)</td></tr>
+<tr class="separator:adb107930a92cf0dfd9f5ef08173b4a63"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a59893f7cf809d922b6d113ed2cf96881" id="r_a59893f7cf809d922b6d113ed2cf96881"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1_net_out.html">gridfire::NetOut</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a59893f7cf809d922b6d113ed2cf96881">evaluate</a> (<a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a> &amp;solver_ctx, const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;netIn) const override</td></tr>
+<tr class="memdesc:a59893f7cf809d922b6d113ed2cf96881"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluates the network for a given timestep.  <br /></td></tr>
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+<tr class="inherit_header pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td></tr>
+<tr class="memitem:a73803c687b93d07f5c148662cc972e70 inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a73803c687b93d07f5c148662cc972e70"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">SingleZoneNetworkSolver</a> (const EngineT &amp;engine)</td></tr>
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+<tr class="memitem:a2a7c2cff73a98cdae3ef3f6eda7a2c3a inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a2a7c2cff73a98cdae3ef3f6eda7a2c3a"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a2a7c2cff73a98cdae3ef3f6eda7a2c3a">~SingleZoneNetworkSolver</a> ()=default</td></tr>
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+<tr class="memitem:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a7bde224299d4cce01f60a85ec2b0f621"><td class="memItemLeft" align="right" valign="top">const EngineT &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td></tr>
+<tr class="memdesc:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">The engine used by this solver strategy.  <br /></td></tr>
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+<h2 class="memtitle"><span class="permalink"><a href="#adb107930a92cf0dfd9f5ef08173b4a63">&#9670;&#160;</a></span>PySingleZoneDynamicNetworkSolver()</h2>
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+          <td class="memname">PySingleZoneDynamicNetworkSolver::PySingleZoneDynamicNetworkSolver </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span></td><td>)</td>
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+<h2 class="memtitle"><span class="permalink"><a href="#a59893f7cf809d922b6d113ed2cf96881">&#9670;&#160;</a></span>evaluate()</h2>
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+          <td class="memname"><a class="el" href="structgridfire_1_1_net_out.html">gridfire::NetOut</a> PySingleZoneDynamicNetworkSolver::evaluate </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>solver_ctx</em></span>, </td>
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+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
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+<p>Evaluates the network for a given timestep. </p>
+<dl class="params"><dt>Parameters</dt><dd>
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+    <tr><td class="paramname">engine_ctx</td><td></td></tr>
+    <tr><td class="paramname">netIn</td><td>The input conditions for the network. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>The output conditions after the timestep. </dd></dl>
+
+<p>Implements <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#abc4e0a88955a1bbac7886132240ca02d">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a>.</p>
+
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-  <tr class="even"><td class="entry"><a class="el" href="class_py_solver_context_base.html#af18f517d550c037d56c44144c07f1ee8">describe</a>() const override</td><td class="entry"><a class="el" href="class_py_solver_context_base.html">PySolverContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="class_py_solver_context_base.html#ac68080cd0e7aa2884ce628925e8cf932">init</a>() override</td><td class="entry"><a class="el" href="class_py_solver_context_base.html">PySolverContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="class_py_solver_context_base.html#a2400e5ab20fe2e5c31a712cb9b24aebe">set_detailed_logging</a>(bool enable) override</td><td class="entry"><a class="el" href="class_py_solver_context_base.html">PySolverContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="class_py_solver_context_base.html#af8f861a94e0a6654a8f9b752a28ad0e7">set_stdout_logging</a>(bool enable) override</td><td class="entry"><a class="el" href="class_py_solver_context_base.html">PySolverContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">~SolverContextBase</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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@@ -29,7 +29,7 @@
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 Public Member Functions</h2></td></tr>
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+<tr class="separator:af8f861a94e0a6654a8f9b752a28ad0e7"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a2400e5ab20fe2e5c31a712cb9b24aebe"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_structgridfire_1_1solver_1_1_solver_context_base"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_structgridfire_1_1solver_1_1_solver_context_base')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td></tr>
+<tr class="memitem:ab1abf9e5ff7f53a6cebe5e00ea5fc0c8 inherit pub_methods_structgridfire_1_1solver_1_1_solver_context_base" id="r_ab1abf9e5ff7f53a6cebe5e00ea5fc0c8"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">~SolverContextBase</a> ()=default</td></tr>
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-<h2 class="memtitle"><span class="permalink"><a href="#af18f517d550c037d56c44144c07f1ee8">&#9670;&#160;</a></span>describe()</h2>
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+          <td class="memname">void PySolverContextBase::init </td>
           <td>(</td>
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+<p>Implements <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ae324568d7ca41599f1ea924f06284da0">gridfire::solver::SolverContextBase</a>.</p>
 
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+</div>
+</div>
+<a id="a2400e5ab20fe2e5c31a712cb9b24aebe" name="a2400e5ab20fe2e5c31a712cb9b24aebe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2400e5ab20fe2e5c31a712cb9b24aebe">&#9670;&#160;</a></span>set_detailed_logging()</h2>
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+<div class="memproto">
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+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
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+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
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+  <td class="mlabels-right">
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+  </tr>
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+
+</div>
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+<a id="af8f861a94e0a6654a8f9b752a28ad0e7" name="af8f861a94e0a6654a8f9b752a28ad0e7"></a>
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+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
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+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
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+</div><div class="memdoc">
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+    [ "init", "class_py_solver_context_base.html#ac68080cd0e7aa2884ce628925e8cf932", null ],
+    [ "set_detailed_logging", "class_py_solver_context_base.html#a2400e5ab20fe2e5c31a712cb9b24aebe", null ],
+    [ "set_stdout_logging", "class_py_solver_context_base.html#af8f861a94e0a6654a8f9b752a28ad0e7", null ]
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+<tr class="memitem:af2c7a12c4c9244a9e21e88c3d9451c3a" id="r_af2c7a12c4c9244a9e21e88c3d9451c3a"><td class="memItemLeft" align="right" valign="top">std::vector&lt; std::tuple&lt; std::string, std::string &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af2c7a12c4c9244a9e21e88c3d9451c3a">describe</a> () const override</td></tr>
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+<p>Describe the context for callback functions. </p>
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+<p>This method should be overridden by derived classes to provide a description of the context that will be passed to the callback function. The intent of this method is that an end user can investigate the context that will be passed to the callback function, and use this information to craft their own callback function. </p>
+
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+
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 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_G" name="letter_G">G</a></dt>
-<dd><a class="el" href="interfacegridfire__mod_1_1gf__construct__engine__from__policy.html">gf_construct_engine_from_policy</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__construct__solver__from__engine.html">gf_construct_solver_from_engine</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__evolve.html">gf_evolve</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__free.html">gf_free</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__get__last__error__message.html">gf_get_last_error_message</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__init.html">gf_init</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__register__species.html">gf_register_species</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html">GraphEngine</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="structGridFireContext.html">GridFireContext</a></dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1GridFireError.html">GridFireError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1partition_1_1GroundStatePartitionFunction.html">GroundStatePartitionFunction</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd></dl>
+<dd><a class="el" href="interfacegridfire__mod_1_1gf__construct__engine__from__policy.html">gf_construct_engine_from_policy</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__construct__solver__from__engine.html">gf_construct_solver_from_engine</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__array.html">gf_evolve_c_array</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__scalar.html">gf_evolve_c_scalar</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__free.html">gf_free</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__get__last__error__message.html">gf_get_last_error_message</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__init.html">gf_init</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__register__species.html">gf_register_species</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="interfacegridfire__mod_1_1gf__set__num__zones.html">gf_set_num_zones</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="structgridfire__mod_1_1gf__type.html">gf_type</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="struct_g_f_context.html">GFContext</a></dd><dd><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></dd><dd><a class="el" href="struct_g_f_point_context.html">GFPointContext</a></dd><dd><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a> (<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a>)</dd><dd><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a> (<a class="el" href="namespacegridfire__mod.html">gridfire_mod</a>)</dd><dd><a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">GridFireConfig</a> (<a class="el" href="namespacegridfire_1_1config.html">gridfire::config</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_grid_fire_error.html">GridFireError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html">GridSolver</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">GridSolverContext</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html">GroundStatePartitionFunction</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_H" name="letter_H">H</a></dt>
-<dd><a class="el" href="structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1TableAxes_01_4.html">hash&lt; gridfire::rates::weak::TableAxes &gt;</a> (<a class="el" href="namespacestd.html">std</a>)</dd><dd><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1Reaction_01_4.html">hash&lt; gridfire::reaction::Reaction &gt;</a> (<a class="el" href="namespacestd.html">std</a>)</dd><dd><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1ReactionSet_01_4.html">hash&lt; gridfire::reaction::ReactionSet &gt;</a> (<a class="el" href="namespacestd.html">std</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1HashingError.html">HashingError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1HotCNOChainPolicy.html">HotCNOChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1HotCNOIChainPolicy.html">HotCNOIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1HotCNOIIChainPolicy.html">HotCNOIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1HotCNOIIIChainPolicy.html">HotCNOIIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd></dl>
+<dd><a class="el" href="structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1_table_axes_01_4.html">hash&lt; gridfire::rates::weak::TableAxes &gt;</a> (<a class="el" href="namespacestd.html">std</a>)</dd><dd><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html">hash&lt; gridfire::reaction::Reaction &gt;</a> (<a class="el" href="namespacestd.html">std</a>)</dd><dd><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html">hash&lt; gridfire::reaction::ReactionSet &gt;</a> (<a class="el" href="namespacestd.html">std</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_hashing_error.html">HashingError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_chain_policy.html">HotCNOChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html">HotCNOIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html">HotCNOIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html">HotCNOIIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd></dl>
 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_I" name="letter_I">I</a></dt>
-<dd><a class="el" href="structgridfire_1_1partition_1_1RauscherThielemannPartitionFunction_1_1IdentifiedIsotope.html">RauscherThielemannPartitionFunction::IdentifiedIsotope</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1IllConditionedJacobianError.html">IllConditionedJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1screening_1_1IntermediateScreeningModel.html">IntermediateScreeningModel</a> (<a class="el" href="namespacegridfire_1_1screening.html">gridfire::screening</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1InterpolationError.html">InterpolationError</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1partition_1_1RauscherThielemannPartitionFunction_1_1InterpolationPoints.html">RauscherThielemannPartitionFunction::InterpolationPoints</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1InvalidQSESolutionError.html">InvalidQSESolutionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1partition_1_1RauscherThielemannPartitionFunction_1_1IsotopeData.html">RauscherThielemannPartitionFunction::IsotopeData</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1IsotopeGrid.html">IsotopeGrid</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd></dl>
+<dd><a class="el" href="structgridfire_1_1partition_1_1_rauscher_thielemann_partition_function_1_1_identified_isotope.html">RauscherThielemannPartitionFunction::IdentifiedIsotope</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_ill_conditioned_jacobian_error.html">IllConditionedJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1screening_1_1_intermediate_screening_model.html">IntermediateScreeningModel</a> (<a class="el" href="namespacegridfire_1_1screening.html">gridfire::screening</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_interpolation_error.html">InterpolationError</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1partition_1_1_rauscher_thielemann_partition_function_1_1_interpolation_points.html">RauscherThielemannPartitionFunction::InterpolationPoints</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_invalid_q_s_e_solution_error.html">InvalidQSESolutionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1partition_1_1_rauscher_thielemann_partition_function_1_1_isotope_data.html">RauscherThielemannPartitionFunction::IsotopeData</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_isotope_grid.html">IsotopeGrid</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_J" name="letter_J">J</a></dt>
-<dd><a class="el" href="classgridfire_1_1exceptions_1_1JacobianError.html">JacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1exceptions_1_1_jacobian_error.html">JacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_K" name="letter_K">K</a></dt>
-<dd><a class="el" href="classgridfire_1_1exceptions_1_1KINSolSolverFailureError.html">KINSolSolverFailureError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1exceptions_1_1_k_i_n_sol_solver_failure_error.html">KINSolSolverFailureError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_L" name="letter_L">L</a></dt>
-<dd><a class="el" href="classgridfire_1_1reaction_1_1LogicalReaclibReaction.html">LogicalReaclibReaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1LogicalTrigger.html">LogicalTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html">LogicalReaclibReaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1_logical_trigger.html">LogicalTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd></dl>
 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_M" name="letter_M">M</a></dt>
-<dd><a class="el" href="classgridfire_1_1policy_1_1MainSequencePolicy.html">MainSequencePolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1MainSequenceReactionChainPolicy.html">MainSequenceReactionChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1io_1_1MESANetworkFileParser.html">MESANetworkFileParser</a> (<a class="el" href="namespacegridfire_1_1io.html">gridfire::io</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1MissingBaseReactionError.html">MissingBaseReactionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1MissingKeyReactionError.html">MissingKeyReactionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1MissingSeedSpeciesError.html">MissingSeedSpeciesError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1MultiReactionChainPolicy.html">MultiReactionChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html">MultiscalePartitioningEngineView</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">MainSequencePolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html">MainSequenceReactionChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">MESANetworkFileParser</a> (<a class="el" href="namespacegridfire_1_1io.html">gridfire::io</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_missing_base_reaction_error.html">MissingBaseReactionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_missing_key_reaction_error.html">MissingKeyReactionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_missing_seed_species_error.html">MissingSeedSpeciesError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html">MultiReactionChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">MultiscalePartitioningEngineView</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">MultiscalePartitioningEngineViewScratchPad</a> (<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a>)</dd><dd><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">MultiZoneNetworkSolver</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_N" name="letter_N">N</a></dt>
-<dd><a class="el" href="structgridfire_1_1NetIn.html">NetIn</a> (<a class="el" href="namespacegridfire.html">gridfire</a>)</dd><dd><a class="el" href="structgridfire_1_1NetOut.html">NetOut</a> (<a class="el" href="namespacegridfire.html">gridfire</a>)</dd><dd><a class="el" href="classgridfire_1_1io_1_1NetworkFileParser.html">NetworkFileParser</a> (<a class="el" href="namespacegridfire_1_1io.html">gridfire::io</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1NetworkPolicy.html">NetworkPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1NetworkPrimingEngineView.html">NetworkPrimingEngineView</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1NetworkResizedError.html">NetworkResizedError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1solver_1_1NetworkSolverStrategy.html">NetworkSolverStrategy</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1NotTrigger.html">NotTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd></dl>
+<dd><a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> (<a class="el" href="namespacegridfire.html">gridfire</a>)</dd><dd><a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> (<a class="el" href="namespacegridfire.html">gridfire</a>)</dd><dd><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html">NetworkFileParser</a> (<a class="el" href="namespacegridfire_1_1io.html">gridfire::io</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">NetworkPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">NetworkPrimingEngineView</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_network_resized_error.html">NetworkResizedError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html">NotTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd></dl>
 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_O" name="letter_O">O</a></dt>
-<dd><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html">OffDiagonalTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1CVODE.html">gridfire::trigger::solver::CVODE</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html">OrTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">OffDiagonalTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html">gridfire::trigger::solver::CVODE</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html">OrTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_P" name="letter_P">P</a></dt>
-<dd><a class="el" href="classgridfire_1_1partition_1_1PartitionFunction.html">PartitionFunction</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1PolicyError.html">PolicyError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1GraphEngine_1_1PrecomputedReaction.html">GraphEngine::PrecomputedReaction</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html">PrimingReport</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonChainPolicy.html">ProtonProtonChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIChainPolicy.html">ProtonProtonIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIIChainPolicy.html">ProtonProtonIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIIIChainPolicy.html">ProtonProtonIIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classPyDynamicEngine.html">PyDynamicEngine</a></dd><dd><a class="el" href="classPyDynamicEngineView.html">PyDynamicEngineView</a></dd><dd><a class="el" href="classPyDynamicNetworkSolverStrategy.html">PyDynamicNetworkSolverStrategy</a></dd><dd><a class="el" href="classPyEngine.html">PyEngine</a></dd><dd><a class="el" href="classPyEngineView.html">PyEngineView</a></dd><dd><a class="el" href="structgridfire_1_1io_1_1gen_1_1PyFunctionDef.html">PyFunctionDef</a> (<a class="el" href="namespacegridfire_1_1io_1_1gen.html">gridfire::io::gen</a>)</dd><dd><a class="el" href="classPyNetworkFileParser.html">PyNetworkFileParser</a></dd><dd><a class="el" href="classPyNetworkPolicy.html">PyNetworkPolicy</a></dd><dd><a class="el" href="classPyPartitionFunction.html">PyPartitionFunction</a></dd><dd><a class="el" href="classPyReactionChainPolicy.html">PyReactionChainPolicy</a></dd><dd><a class="el" href="classPyScreening.html">PyScreening</a></dd><dd><a class="el" href="classPySolverContextBase.html">PySolverContextBase</a></dd></dl>
+<dd><a class="el" href="classgridfire_1_1partition_1_1_partition_function.html">PartitionFunction</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">PointSolver</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="structgridfire_1_1config_1_1_point_solver_config.html">PointSolverConfig</a> (<a class="el" href="namespacegridfire_1_1config.html">gridfire::config</a>)</dd><dd><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">PointSolverContext</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">PointSolverTimestepContext</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_policy_error.html">PolicyError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html">GraphEngine::PrecomputationKernelResults</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html">GraphEngine::PrecomputedReaction</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_chain_policy.html">ProtonProtonChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html">ProtonProtonIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html">ProtonProtonIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html">ProtonProtonIIIChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="class_py_dynamic_engine.html">PyDynamicEngine</a></dd><dd><a class="el" href="class_py_dynamic_engine_view.html">PyDynamicEngineView</a></dd><dd><a class="el" href="class_py_engine.html">PyEngine</a></dd><dd><a class="el" href="class_py_engine_view.html">PyEngineView</a></dd><dd><a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html">PyFunctionDef</a> (<a class="el" href="namespacegridfire_1_1io_1_1gen.html">gridfire::io::gen</a>)</dd><dd><a class="el" href="class_py_multi_zone_dynamic_network_solver.html">PyMultiZoneDynamicNetworkSolver</a></dd><dd><a class="el" href="class_py_network_file_parser.html">PyNetworkFileParser</a></dd><dd><a class="el" href="class_py_network_policy.html">PyNetworkPolicy</a></dd><dd><a class="el" href="class_py_partition_function.html">PyPartitionFunction</a></dd><dd><a class="el" href="class_py_reaction_chain_policy.html">PyReactionChainPolicy</a></dd><dd><a class="el" href="class_py_screening.html">PyScreening</a></dd><dd><a class="el" href="class_py_single_zone_dynamic_network_solver.html">PySingleZoneDynamicNetworkSolver</a></dd><dd><a class="el" href="class_py_solver_context_base.html">PySolverContextBase</a></dd><dd><a class="el" href="class_py_timestep_context_base.html">PyTimestepContextBase</a></dd></dl>
 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_Q" name="letter_Q">Q</a></dt>
-<dd><a class="el" href="structgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSEGroup.html">MultiscalePartitioningEngineView::QSEGroup</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html">MultiscalePartitioningEngineView::QSESolver</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd></dl>
+<dd><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">MultiscalePartitioningEngineView::QSEGroup</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">MultiscalePartitioningEngineView::QSESolver</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_R" name="letter_R">R</a></dt>
-<dd><a class="el" href="structgridfire_1_1reaction_1_1RateCoefficientSet.html">RateCoefficientSet</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1RateDataRow.html">RateDataRow</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1partition_1_1record_1_1RauscherThielemannPartitionDataRecord.html">RauscherThielemannPartitionDataRecord</a> (<a class="el" href="namespacegridfire_1_1partition_1_1record.html">gridfire::partition::record</a>)</dd><dd><a class="el" href="classgridfire_1_1partition_1_1RauscherThielemannPartitionFunction.html">RauscherThielemannPartitionFunction</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html">ReaclibReaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1Reaction.html">Reaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1ReactionChainPolicy.html">ReactionChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1ReactionError.html">ReactionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1AdaptiveEngineView_1_1ReactionFlow.html">AdaptiveEngineView::ReactionFlow</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1ReactionParsingError.html">ReactionParsingError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1reaclib_1_1ReactionRecord.html">ReactionRecord</a> (<a class="el" href="namespacegridfire_1_1reaclib.html">gridfire::reaclib</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html">ReactionSet</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd></dl>
+<dd><a class="el" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html">RateCoefficientSet</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_rate_data_row.html">RateDataRow</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1partition_1_1record_1_1_rauscher_thielemann_partition_data_record.html">RauscherThielemannPartitionDataRecord</a> (<a class="el" href="namespacegridfire_1_1partition_1_1record.html">gridfire::partition::record</a>)</dd><dd><a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html">RauscherThielemannPartitionFunction</a> (<a class="el" href="namespacegridfire_1_1partition.html">gridfire::partition</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">ReaclibReaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1_reaction.html">Reaction</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html">ReactionChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_reaction_error.html">ReactionError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html">AdaptiveEngineView::ReactionFlow</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_reaction_parsing_error.html">ReactionParsingError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html">ReactionRecord</a> (<a class="el" href="namespacegridfire_1_1reaclib.html">gridfire::reaclib</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">ReactionSet</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd></dl>
 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_S" name="letter_S">S</a></dt>
-<dd><a class="el" href="classgridfire_1_1screening_1_1ScreeningModel.html">ScreeningModel</a> (<a class="el" href="namespacegridfire_1_1screening.html">gridfire::screening</a>)</dd><dd><a class="el" href="classgridfire_1_1io_1_1SimpleReactionListFileParser.html">SimpleReactionListFileParser</a> (<a class="el" href="namespacegridfire_1_1io.html">gridfire::io</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html">SimulationTimeTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1CVODE.html">gridfire::trigger::solver::CVODE</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1SingularJacobianError.html">SingularJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1solver_1_1SolverContextBase.html">SolverContextBase</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1SolverError.html">SolverError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classSolverPluginInterface.html">SolverPluginInterface</a></dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1StaleJacobianError.html">StaleJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1StepDerivatives.html">StepDerivatives</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1SUNDIALSError.html">SUNDIALSError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">ScratchPadError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1screening_1_1_screening_model.html">ScreeningModel</a> (<a class="el" href="namespacegridfire_1_1screening.html">gridfire::screening</a>)</dd><dd><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">SimpleReactionListFileParser</a> (<a class="el" href="namespacegridfire_1_1io.html">gridfire::io</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">SimulationTimeTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html">gridfire::trigger::solver::CVODE</a>)</dd><dd><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_singular_jacobian_error.html">SingularJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1config_1_1_solver_config.html">SolverConfig</a> (<a class="el" href="namespacegridfire_1_1config.html">gridfire::config</a>)</dd><dd><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_solver_error.html">SolverError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="class_solver_plugin_interface.html">SolverPluginInterface</a></dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_stale_jacobian_error.html">StaleJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> (<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_s_u_n_d_i_a_l_s_error.html">SUNDIALSError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_T" name="letter_T">T</a></dt>
-<dd><a class="el" href="classgridfire_1_1utils_1_1Table.html">Table</a> (<a class="el" href="namespacegridfire_1_1utils.html">gridfire::utils</a>)</dd><dd><a class="el" href="classgridfire_1_1utils_1_1TableBase.html">TableBase</a> (<a class="el" href="namespacegridfire_1_1utils.html">gridfire::utils</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1TemperatureDependentChainPolicy.html">TemperatureDependentChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1TimestepCollapseTrigger.html">TimestepCollapseTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1CVODE.html">gridfire::trigger::solver::CVODE</a>)</dd><dd><a class="el" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html">CVODESolverStrategy::TimestepContext</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1Trigger.html">Trigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd><dd><a class="el" href="structgridfire_1_1trigger_1_1TriggerResult.html">TriggerResult</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1TripleAlphaChainPolicy.html">TripleAlphaChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1utils_1_1_table.html">Table</a> (<a class="el" href="namespacegridfire_1_1utils.html">gridfire::utils</a>)</dd><dd><a class="el" href="classgridfire_1_1utils_1_1_table_base.html">TableBase</a> (<a class="el" href="namespacegridfire_1_1utils.html">gridfire::utils</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html">TemperatureDependentChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">TimestepCollapseTrigger</a> (<a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html">gridfire::trigger::solver::CVODE</a>)</dd><dd><a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">TimestepContextBase</a> (<a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>)</dd><dd><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">Trigger</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd><dd><a class="el" href="structgridfire_1_1config_1_1_trigger_config.html">TriggerConfig</a> (<a class="el" href="namespacegridfire_1_1config.html">gridfire::config</a>)</dd><dd><a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> (<a class="el" href="namespacegridfire_1_1trigger.html">gridfire::trigger</a>)</dd><dd><a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html">TripleAlphaChainPolicy</a> (<a class="el" href="namespacegridfire_1_1policy.html">gridfire::policy</a>)</dd></dl>
 <dl class="classindex even">
 <dt class="alphachar"><a id="letter_U" name="letter_U">U</a></dt>
-<dd><a class="el" href="classgridfire_1_1exceptions_1_1UnableToSetNetworkReactionsError.html">UnableToSetNetworkReactionsError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1UninitializedJacobianError.html">UninitializedJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1UnknownJacobianError.html">UnknownJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver_1_1UserData.html">MultiscalePartitioningEngineView::QSESolver::UserData</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1UtilityError.html">UtilityError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
+<dd><a class="el" href="classgridfire_1_1exceptions_1_1_unable_to_set_network_reactions_error.html">UnableToSetNetworkReactionsError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_uninitialized_jacobian_error.html">UninitializedJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_unknown_jacobian_error.html">UnknownJacobianError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd><dd><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html">MultiscalePartitioningEngineView::QSESolver::UserData</a> (<a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a>)</dd><dd><a class="el" href="classgridfire_1_1exceptions_1_1_utility_error.html">UtilityError</a> (<a class="el" href="namespacegridfire_1_1exceptions.html">gridfire::exceptions</a>)</dd></dl>
 <dl class="classindex odd">
 <dt class="alphachar"><a id="letter_W" name="letter_W">W</a></dt>
-<dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakRateDerivatives.html">WeakRateDerivatives</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakRateInterpolator.html">WeakRateInterpolator</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakRatePayload.html">WeakRatePayload</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1WeakReaclibReaction.html">WeakReaclibReaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html">WeakReaction</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakReactionEntry.html">WeakReactionEntry</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReactionMap.html">WeakReactionMap</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1screening_1_1WeakScreeningModel.html">WeakScreeningModel</a> (<a class="el" href="namespacegridfire_1_1screening.html">gridfire::screening</a>)</dd></dl>
+<dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_derivatives.html">WeakRateDerivatives</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html">WeakRateInterpolator</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_payload.html">WeakRatePayload</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html">WeakReaclibReaction</a> (<a class="el" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a>)</dd><dd><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html">WeakReaction</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html">WeakReactionEntry</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html">WeakReactionMap</a> (<a class="el" href="namespacegridfire_1_1rates_1_1weak.html">gridfire::rates::weak</a>)</dd><dd><a class="el" href="classgridfire_1_1screening_1_1_weak_screening_model.html">WeakScreeningModel</a> (<a class="el" href="namespacegridfire_1_1screening.html">gridfire::screening</a>)</dd></dl>
 </div>
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 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view-members.html b/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view-members.html
index d7ade158..d21eec82 100644
--- a/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -106,48 +106,39 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_adaptive_engine_view.html'
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a>, including all inherited members.</p>
 <table class="directory">
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aea8914f56e34445aacf0a5d0af073897">AdaptiveEngineView</a>(DynamicEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6f13f42773dec03a6b3e90b4997d42fb">calculateAllReactionFlows</a>(const NetIn &amp;netIn) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a17bbc9c0d480a8533acb193cb9a46fea">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5bd0174105e836dd98c71ab495357e5b">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5de5211bc99a1995143307284be6df4a">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a77d4c08eecfad5cc414161d0fc8db946">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a0a49d174e105adb3ffd9cf98ff58db3e">Config</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a99ffb65b98dcbc1eae8643c25dbffe91">cullReactionsByFlow</a>(const std::vector&lt; ReactionFlow &gt; &amp;allFlows, const std::unordered_set&lt; fourdst::atomic::Species &gt; &amp;reachableSpecies, const fourdst::composition::Composition &amp;comp, double maxFlow) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aab32396ad3ab20960bfd505bb6128ff0">finalizeActiveSet</a>(const std::vector&lt; const reaction::Reaction * &gt; &amp;finalReactions)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a1bc1c462fe57cc30af5553c353e43db8">findReachableSpecies</a>(const NetIn &amp;netIn) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a2a44dfae512b370bad6b977330e0636a">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a1b7b3b0b449d0859d57f99188cdd83d6">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ae894f46c67a8b8e02b8988a6b73dc9e5">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a754445722193f11ae534b7c0afa9b8aa">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a69122f748b873b872aa86350061b1b5c">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac5a0def6b6af0bd93bf9057c25f048ff">getDepth</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a722ea6e07d46f739c29ad681c7500f8c">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aaa2d47f44e5bb4d9660d7c017cc5085c">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#acbd5b36262fa7d40f3274f4be6f0b8f6">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a420666d17650736e20402514294f9a14">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ad7a82578006e5c55ca7716e7ab7e710c">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5166197fd61060b2a9a445f707ee871b">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ade5dad29a79209e677b259a9b28c5133">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aae6d8bab169721f0b89682ce8c4b4f10">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6c08b4235996d12472d2a327eab8e984">isStale</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ae8810c067d301b2f620869b0a5c8d5ce">LogManager</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a90a8fa566ca9fe2b74427ea497353e1b">m_activeReactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8c7bf0f0e5ad83821e3959c47c81cd60">m_activeSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a541f54469c3d2d6ab7671b19057b4341">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ac68b44310985613bb5736dd32d415734">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8eba901e7c19989a9818ec8cbf1ebb7f">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6e0d0029016a302b3209ba0275029479">calculateAllReactionFlows</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8c12a3dd77c7f277a982b2e826de1b95">calculateEpsDerivatives</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aededeeeec7833c8f40b0aa27ff165833">calculateMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a4c51bcc65f1bc6afdb9487546775ce79">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a7d4d16693db712b1823377ad460f5144">collectComposition</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a2e5d6985c84cc9c404080f8add5f5c18">constructStateBlob</a>(const scratch::StateBlob *blob) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aebb0d838af29b74b86e708e614698074">cullReactionsByFlow</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; ReactionFlow &gt; &amp;allFlows, const std::unordered_set&lt; fourdst::atomic::Species &gt; &amp;reachableSpecies, const fourdst::composition::Composition &amp;comp, double maxFlow) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a28a8898cdde41290bec11f3a4dfd16ef">finalizeActiveSet</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; const reaction::Reaction * &gt; &amp;finalReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a9da9b3d6f02af5a7343d340e0418c642">findReachableSpecies</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8d2ad2c011dede7b9abc508e0eead302">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6c279469be6f58b4213ea9f9cf9d07cc">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a7ece1ddb7b891695b70566e29ed5ab8f">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a69122f748b873b872aa86350061b1b5c">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a03857da090f2efb6d725bdd176f3e37e">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a4a9d62261b218d85a4a59d3402104d9b">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#abbb82ee0db6a3c033019004ef48b1bff">getMostRecentRHSCalculation</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a14363a95a15d66893d3bec0c3f69b34f">getNetworkReactions</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a729b8f6846cbffa746085c038108ef29">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a58d208da3143807baac98484aa260bd2">getScreeningModel</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6fdf4ba999ca4ee089297380f3af9249">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a46c20214859cb8e112cfffc46c54d232">getSpeciesIndex</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#af9de6a43920f64202c865d45ee131e10">getSpeciesStatus</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aae66fd327dc4d0e1a0e54a6e05a77e47">getSpeciesTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ae8810c067d301b2f620869b0a5c8d5ce">LogManager</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a541f54469c3d2d6ab7671b19057b4341">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a3f1e5262ed902b08b73a97c6a41133c8">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a60c4792822f671f094a86378265a416a">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a24cc7e1a7471d707707b4d44ebd81068">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a955a337f89a375637ac48071be45c54c">primeEngine</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a85e70c0ff022c31702472aa39fc64816">rescueEdgeSpeciesDestructionChannel</a>(const fourdst::composition::Composition &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a21367fa61169e6f5185bc91b40cc04be">RescueSet</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5dbfcafa606c3242dc4ced62c2494a2d">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ab050409db954a3fa593633f9d2cd5d89">setScreeningModel</a>(screening::ScreeningType model) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8db6ba52f454c136ee0a1335436fab6e">update</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a63837a6a4343a2ac6a61e21576b62655">validateState</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a27bb70d1426d6030779d83247a87b4a5">primeEngine</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aa7b6561da6dd8513fef5c8c03737d433">project</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a2739af9799f5b720a154d2f862ab7c30">rescueEdgeSpeciesDestructionChannel</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a21367fa61169e6f5185bc91b40cc04be">RescueSet</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view.html b/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view.html
index 65324ef2..fceb3ee7 100644
--- a/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view.html
+++ b/docs/html/classgridfire_1_1engine_1_1_adaptive_engine_view.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -122,7 +122,7 @@ Inheritance diagram for gridfire::engine::AdaptiveEngineView:</div>
 <div class="dynheader">
 Collaboration diagram for gridfire::engine::AdaptiveEngineView:</div>
 <div class="dyncontent">
-<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1engine_1_1_adaptive_engine_view__coll__graph.svg" width="100%" height="562"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1engine_1_1_adaptive_engine_view__coll__graph.svg" width="368" height="231"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
@@ -136,81 +136,65 @@ Public Member Functions</h2></td></tr>
 <tr class="memitem:aea8914f56e34445aacf0a5d0af073897" id="r_aea8914f56e34445aacf0a5d0af073897"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aea8914f56e34445aacf0a5d0af073897">AdaptiveEngineView</a> (<a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;baseEngine)</td></tr>
 <tr class="memdesc:aea8914f56e34445aacf0a5d0af073897"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs an <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a>.  <br /></td></tr>
 <tr class="separator:aea8914f56e34445aacf0a5d0af073897"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a99ffb65b98dcbc1eae8643c25dbffe91"><td class="mdescLeft">&#160;</td><td class="mdescRight">Culls reactions from the network based on their flow rates.  <br /></td></tr>
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-<tr class="memitem:aab32396ad3ab20960bfd505bb6128ff0" id="r_aab32396ad3ab20960bfd505bb6128ff0"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aab32396ad3ab20960bfd505bb6128ff0">finalizeActiveSet</a> (const std::vector&lt; const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> * &gt; &amp;finalReactions)</td></tr>
-<tr class="memdesc:aab32396ad3ab20960bfd505bb6128ff0"><td class="mdescLeft">&#160;</td><td class="mdescRight">Finalizes the set of active species and reactions.  <br /></td></tr>
-<tr class="separator:aab32396ad3ab20960bfd505bb6128ff0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6e0d0029016a302b3209ba0275029479" id="r_a6e0d0029016a302b3209ba0275029479"><td class="memItemLeft" align="right" valign="top">std::pair&lt; std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html">ReactionFlow</a> &gt;, fourdst::composition::Composition &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6e0d0029016a302b3209ba0275029479">calculateAllReactionFlows</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;netIn) const</td></tr>
+<tr class="memdesc:a6e0d0029016a302b3209ba0275029479"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculates the molar reaction flow rate for all reactions in the full network.  <br /></td></tr>
+<tr class="separator:a6e0d0029016a302b3209ba0275029479"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a9da9b3d6f02af5a7343d340e0418c642" id="r_a9da9b3d6f02af5a7343d340e0418c642"><td class="memItemLeft" align="right" valign="top">std::unordered_set&lt; fourdst::atomic::Species &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a9da9b3d6f02af5a7343d340e0418c642">findReachableSpecies</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;netIn) const</td></tr>
+<tr class="memdesc:a9da9b3d6f02af5a7343d340e0418c642"><td class="mdescLeft">&#160;</td><td class="mdescRight">Finds all species that are reachable from the initial fuel through the reaction network.  <br /></td></tr>
+<tr class="separator:a9da9b3d6f02af5a7343d340e0418c642"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aebb0d838af29b74b86e708e614698074" id="r_aebb0d838af29b74b86e708e614698074"><td class="memItemLeft" align="right" valign="top">std::vector&lt; const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> * &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aebb0d838af29b74b86e708e614698074">cullReactionsByFlow</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html">ReactionFlow</a> &gt; &amp;allFlows, const std::unordered_set&lt; fourdst::atomic::Species &gt; &amp;reachableSpecies, const fourdst::composition::Composition &amp;comp, double maxFlow) const</td></tr>
+<tr class="memdesc:aebb0d838af29b74b86e708e614698074"><td class="mdescLeft">&#160;</td><td class="mdescRight">Culls reactions from the network based on their flow rates.  <br /></td></tr>
+<tr class="separator:aebb0d838af29b74b86e708e614698074"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2739af9799f5b720a154d2f862ab7c30" id="r_a2739af9799f5b720a154d2f862ab7c30"><td class="memItemLeft" align="right" valign="top"><a class="el" href="#a21367fa61169e6f5185bc91b40cc04be">RescueSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2739af9799f5b720a154d2f862ab7c30">rescueEdgeSpeciesDestructionChannel</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td></tr>
+<tr class="separator:a2739af9799f5b720a154d2f862ab7c30"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a28a8898cdde41290bec11f3a4dfd16ef" id="r_a28a8898cdde41290bec11f3a4dfd16ef"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a28a8898cdde41290bec11f3a4dfd16ef">finalizeActiveSet</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> * &gt; &amp;finalReactions) const</td></tr>
+<tr class="memdesc:a28a8898cdde41290bec11f3a4dfd16ef"><td class="mdescLeft">&#160;</td><td class="mdescRight">Finalizes the set of active species and reactions.  <br /></td></tr>
+<tr class="separator:a28a8898cdde41290bec11f3a4dfd16ef"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
 Private Attributes</h2></td></tr>
-<tr class="memitem:ac68b44310985613bb5736dd32d415734" id="r_ac68b44310985613bb5736dd32d415734"><td class="memItemLeft" align="right" valign="top"><a class="el" href="#a0a49d174e105adb3ffd9cf98ff58db3e">Config</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac68b44310985613bb5736dd32d415734">m_config</a> = Config::getInstance()</td></tr>
-<tr class="memdesc:ac68b44310985613bb5736dd32d415734"><td class="mdescLeft">&#160;</td><td class="mdescRight">A reference to the singleton <a class="el" href="#a0a49d174e105adb3ffd9cf98ff58db3e">Config</a> instance, used for retrieving configuration parameters.  <br /></td></tr>
-<tr class="separator:ac68b44310985613bb5736dd32d415734"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3f1e5262ed902b08b73a97c6a41133c8" id="r_a3f1e5262ed902b08b73a97c6a41133c8"><td class="memItemLeft" align="right" valign="top">fourdst::config::Config&lt; <a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3f1e5262ed902b08b73a97c6a41133c8">m_config</a></td></tr>
+<tr class="separator:a3f1e5262ed902b08b73a97c6a41133c8"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a60c4792822f671f094a86378265a416a" id="r_a60c4792822f671f094a86378265a416a"><td class="memItemLeft" align="right" valign="top">quill::Logger *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a60c4792822f671f094a86378265a416a">m_logger</a> = LogManager::getInstance().getLogger(&quot;log&quot;)</td></tr>
 <tr class="memdesc:a60c4792822f671f094a86378265a416a"><td class="mdescLeft">&#160;</td><td class="mdescRight">A pointer to the logger instance, used for logging messages.  <br /></td></tr>
 <tr class="separator:a60c4792822f671f094a86378265a416a"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a541f54469c3d2d6ab7671b19057b4341" id="r_a541f54469c3d2d6ab7671b19057b4341"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a541f54469c3d2d6ab7671b19057b4341">m_baseEngine</a></td></tr>
 <tr class="memdesc:a541f54469c3d2d6ab7671b19057b4341"><td class="mdescLeft">&#160;</td><td class="mdescRight">The underlying engine to which this view delegates calculations.  <br /></td></tr>
 <tr class="separator:a541f54469c3d2d6ab7671b19057b4341"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a8c7bf0f0e5ad83821e3959c47c81cd60" id="r_a8c7bf0f0e5ad83821e3959c47c81cd60"><td class="memItemLeft" align="right" valign="top">std::vector&lt; fourdst::atomic::Species &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8c7bf0f0e5ad83821e3959c47c81cd60">m_activeSpecies</a></td></tr>
-<tr class="memdesc:a8c7bf0f0e5ad83821e3959c47c81cd60"><td class="mdescLeft">&#160;</td><td class="mdescRight">The set of species that are currently active in the network.  <br /></td></tr>
-<tr class="separator:a8c7bf0f0e5ad83821e3959c47c81cd60"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a90a8fa566ca9fe2b74427ea497353e1b" id="r_a90a8fa566ca9fe2b74427ea497353e1b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a90a8fa566ca9fe2b74427ea497353e1b">m_activeReactions</a></td></tr>
-<tr class="memdesc:a90a8fa566ca9fe2b74427ea497353e1b"><td class="mdescLeft">&#160;</td><td class="mdescRight">The set of reactions that are currently active in the network.  <br /></td></tr>
-<tr class="separator:a90a8fa566ca9fe2b74427ea497353e1b"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a8eba901e7c19989a9818ec8cbf1ebb7f" id="r_a8eba901e7c19989a9818ec8cbf1ebb7f"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8eba901e7c19989a9818ec8cbf1ebb7f">m_isStale</a> = true</td></tr>
-<tr class="memdesc:a8eba901e7c19989a9818ec8cbf1ebb7f"><td class="mdescLeft">&#160;</td><td class="mdescRight">A flag indicating whether the view is stale and needs to be updated.  <br /></td></tr>
-<tr class="separator:a8eba901e7c19989a9818ec8cbf1ebb7f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>An engine view that dynamically adapts the reaction network based on runtime conditions. </p>
 <p>This class implements an <a class="el" href="classgridfire_1_1engine_1_1_engine_view.html" title="Abstract base class for a &quot;view&quot; of a reaction network engine.">EngineView</a> that dynamically culls species and reactions from the full reaction network based on their reaction flow rates and connectivity. This allows for efficient simulation of reaction networks by focusing computational effort on the most important species and reactions.</p>
 <p>The <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> maintains a subset of "active" species and reactions, and maps between the full network indices and the active subset indices. This allows the base engine to operate on the full network data, while the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> provides a reduced view for external clients.</p>
-<p>The adaptation process is driven by the <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> method, which performs the following steps:</p><ol type="1">
+<p>The adaptation process is driven by the <code>update()</code> method, which performs the following steps:</p><ol type="1">
 <li><b><a class="el" href="classgridfire_1_1engine_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> Flow Calculation:</b> Calculates the molar reaction flow rate for each reaction in the full network based on the current temperature, density, and composition.</li>
 <li><b><a class="el" href="classgridfire_1_1engine_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> Culling:</b> Culls reactions with flow rates below a threshold, determined by a relative culling threshold multiplied by the maximum flow rate.</li>
 <li><b>Connectivity Analysis:</b> Performs a connectivity analysis to identify species that are reachable from the initial fuel species through the culled reaction network.</li>
@@ -286,30 +255,8 @@ Private Attributes</h2></td></tr>
 <dd>
 <a class="el" href="engine__view__abstract_8h.html" title="Abstract interfaces for engine &quot;views&quot; in GridFire.">engine_view_abstract.h</a> </dd>
 <dd>
-<a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">AdaptiveEngineView::update()</a> </dd></dl>
+AdaptiveEngineView::update() </dd></dl>
 </div><h2 class="groupheader">Member Typedef Documentation</h2>
-<a id="a0a49d174e105adb3ffd9cf98ff58db3e" name="a0a49d174e105adb3ffd9cf98ff58db3e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a0a49d174e105adb3ffd9cf98ff58db3e">&#9670;&#160;</a></span>Config</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">using <a class="el" href="#a0a49d174e105adb3ffd9cf98ff58db3e">gridfire::engine::AdaptiveEngineView::Config</a> = fourdst::config::Config</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-</div>
-</div>
 <a id="ae8810c067d301b2f620869b0a5c8d5ce" name="ae8810c067d301b2f620869b0a5c8d5ce"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#ae8810c067d301b2f620869b0a5c8d5ce">&#9670;&#160;</a></span>LogManager</h2>
 
@@ -390,8 +337,8 @@ Private Attributes</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a6f13f42773dec03a6b3e90b4997d42fb" name="a6f13f42773dec03a6b3e90b4997d42fb"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6f13f42773dec03a6b3e90b4997d42fb">&#9670;&#160;</a></span>calculateAllReactionFlows()</h2>
+<a id="a6e0d0029016a302b3209ba0275029479" name="a6e0d0029016a302b3209ba0275029479"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6e0d0029016a302b3209ba0275029479">&#9670;&#160;</a></span>calculateAllReactionFlows()</h2>
 
 <div class="memitem">
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@@ -402,8 +349,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::pair&lt; std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html">AdaptiveEngineView::ReactionFlow</a> &gt;, fourdst::composition::Composition &gt; gridfire::engine::AdaptiveEngineView::calculateAllReactionFlows </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -417,6 +368,7 @@ Private Attributes</h2></td></tr>
 <p>This method iterates through all reactions in the base engine's network and calculates their molar flow rates based on the provided network input conditions (temperature, density, and composition). It also constructs a vector of molar abundances for all species in the full network.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">netIn</td><td>The current network input, containing temperature, density, and composition. </td></tr>
   </table>
   </dd>
@@ -434,8 +386,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a17bbc9c0d480a8533acb193cb9a46fea" name="a17bbc9c0d480a8533acb193cb9a46fea"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a17bbc9c0d480a8533acb193cb9a46fea">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
+<a id="a8c12a3dd77c7f277a982b2e826de1b95" name="a8c12a3dd77c7f277a982b2e826de1b95"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8c12a3dd77c7f277a982b2e826de1b95">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
 
 <div class="memitem">
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@@ -446,6 +398,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">EnergyDerivatives</a> gridfire::engine::AdaptiveEngineView::calculateEpsDerivatives </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -467,6 +424,7 @@ Private Attributes</h2></td></tr>
 </div><div class="memdoc">
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3. </td></tr>
@@ -475,12 +433,12 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A struct containing the derivatives of the energy generation rate with respect to temperature and density. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ada6a1295a92c2aede841672ecae0cede">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a3fd5d4f3c58d1790b7a517b5ef888eaf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a5bd0174105e836dd98c71ab495357e5b" name="a5bd0174105e836dd98c71ab495357e5b"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a5bd0174105e836dd98c71ab495357e5b">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
+<a id="aededeeeec7833c8f40b0aa27ff165833" name="aededeeeec7833c8f40b0aa27ff165833"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aededeeeec7833c8f40b0aa27ff165833">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -491,6 +449,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">double gridfire::engine::AdaptiveEngineView::calculateMolarReactionFlow </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
         </tr>
         <tr>
@@ -519,6 +482,7 @@ Private Attributes</h2></td></tr>
 <p>Calculates the molar reaction flow for a given reaction in the active network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">reaction</td><td>The reaction for which to calculate the flow. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -530,18 +494,18 @@ Private Attributes</h2></td></tr>
 <p>This method maps the culled abundances to the full network abundances and calls the base engine to calculate the molar reaction flow.</p>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
     <tr><td class="paramname">std::runtime_error</td><td>If the reaction is not part of the active reactions in the adaptive engine view. </td></tr>
   </table>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa57fa5e58b98a03fba31bcddda8001d4">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#abf0f13b9eae66da6119e6fca826379e8">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a5de5211bc99a1995143307284be6df4a" name="a5de5211bc99a1995143307284be6df4a"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a5de5211bc99a1995143307284be6df4a">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
+<a id="a4c51bcc65f1bc6afdb9487546775ce79" name="a4c51bcc65f1bc6afdb9487546775ce79"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4c51bcc65f1bc6afdb9487546775ce79">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -552,6 +516,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::AdaptiveEngineView::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -562,7 +531,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -575,9 +549,11 @@ Private Attributes</h2></td></tr>
 <p>Calculates the right-hand side (dY/dt) and energy generation for the active species. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td></td></tr>
   </table>
   </dd>
 </dl>
@@ -585,18 +561,18 @@ Private Attributes</h2></td></tr>
 <p>This method maps the culled abundances to the full network abundances, calls the base engine to calculate the RHS and energy generation, and then maps the full network derivatives back to the culled derivatives.</p>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section see"><dt>See also</dt><dd><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">AdaptiveEngineView::update()</a> </dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AdaptiveEngineView::update() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>.</p>
 
 </div>
 </div>
-<a id="a77d4c08eecfad5cc414161d0fc8db946" name="a77d4c08eecfad5cc414161d0fc8db946"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a77d4c08eecfad5cc414161d0fc8db946">&#9670;&#160;</a></span>collectComposition()</h2>
+<a id="a7d4d16693db712b1823377ad460f5144" name="a7d4d16693db712b1823377ad460f5144"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7d4d16693db712b1823377ad460f5144">&#9670;&#160;</a></span>collectComposition()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -607,6 +583,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">fourdst::composition::Composition gridfire::engine::AdaptiveEngineView::collectComposition </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -630,6 +611,7 @@ Private Attributes</h2></td></tr>
 <p>Collect the composition of the base engine, ensure all active species are registered, and pass the composition back to the caller. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3.</td></tr>
@@ -638,12 +620,39 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section note"><dt>Note</dt><dd>This function ensures that the state of both the base engine and the adaptive view are synchronized in the result back to the caller </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a41877719ae5e8de53c1692c7cf9bfbfc">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a99ffb65b98dcbc1eae8643c25dbffe91" name="a99ffb65b98dcbc1eae8643c25dbffe91"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a99ffb65b98dcbc1eae8643c25dbffe91">&#9670;&#160;</a></span>cullReactionsByFlow()</h2>
+<a id="a2e5d6985c84cc9c404080f8add5f5c18" name="a2e5d6985c84cc9c404080f8add5f5c18"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2e5d6985c84cc9c404080f8add5f5c18">&#9670;&#160;</a></span>constructStateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &gt; gridfire::engine::AdaptiveEngineView::constructStateBlob </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> *</td>          <td class="paramname"><span class="paramname"><em>blob</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="aebb0d838af29b74b86e708e614698074" name="aebb0d838af29b74b86e708e614698074"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aebb0d838af29b74b86e708e614698074">&#9670;&#160;</a></span>cullReactionsByFlow()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -654,6 +663,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> * &gt; gridfire::engine::AdaptiveEngineView::cullReactionsByFlow </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html">ReactionFlow</a> &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>allFlows</em></span>, </td>
         </tr>
         <tr>
@@ -683,6 +697,7 @@ Private Attributes</h2></td></tr>
 <p>This method filters the list of all reactions, keeping only those with a flow rate above an absolute culling threshold. The threshold is calculated by multiplying the maximum flow rate by a relative culling threshold read from the configuration.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">allFlows</td><td>A vector of all reactions and their flow rates. </td></tr>
     <tr><td class="paramname">reachableSpecies</td><td>A set of all species reachable from the initial fuel. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system. </td></tr>
@@ -702,8 +717,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="aab32396ad3ab20960bfd505bb6128ff0" name="aab32396ad3ab20960bfd505bb6128ff0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aab32396ad3ab20960bfd505bb6128ff0">&#9670;&#160;</a></span>finalizeActiveSet()</h2>
+<a id="a28a8898cdde41290bec11f3a4dfd16ef" name="a28a8898cdde41290bec11f3a4dfd16ef"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a28a8898cdde41290bec11f3a4dfd16ef">&#9670;&#160;</a></span>finalizeActiveSet()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -714,8 +729,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">void gridfire::engine::AdaptiveEngineView::finalizeActiveSet </td>
           <td>(</td>
-          <td class="paramtype">const std::vector&lt; const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> * &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>finalReactions</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const std::vector&lt; const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> * &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>finalReactions</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -729,6 +748,7 @@ Private Attributes</h2></td></tr>
 <p>This method takes the final list of culled reactions and populates the <code>m_activeReactions</code> and <code>m_activeSpecies</code> members. The active species are determined by collecting all reactants and products from the final reactions. The active species list is then sorted by mass.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">finalReactions</td><td>A vector of pointers to the reactions to be included in the active set.</td></tr>
   </table>
   </dd>
@@ -742,8 +762,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a1bc1c462fe57cc30af5553c353e43db8" name="a1bc1c462fe57cc30af5553c353e43db8"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a1bc1c462fe57cc30af5553c353e43db8">&#9670;&#160;</a></span>findReachableSpecies()</h2>
+<a id="a9da9b3d6f02af5a7343d340e0418c642" name="a9da9b3d6f02af5a7343d340e0418c642"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9da9b3d6f02af5a7343d340e0418c642">&#9670;&#160;</a></span>findReachableSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -754,8 +774,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::unordered_set&lt; Species &gt; gridfire::engine::AdaptiveEngineView::findReachableSpecies </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -769,6 +793,7 @@ Private Attributes</h2></td></tr>
 <p>This method performs a connectivity analysis to identify all species that can be produced starting from the initial fuel species. A species is considered part of the initial fuel if its mass fraction is above a certain threshold (<code>ABUNDANCE_FLOOR</code>).</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">netIn</td><td>The current network input, containing the initial composition. </td></tr>
   </table>
   </dd>
@@ -785,8 +810,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a2a44dfae512b370bad6b977330e0636a" name="a2a44dfae512b370bad6b977330e0636a"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2a44dfae512b370bad6b977330e0636a">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
+<a id="a8d2ad2c011dede7b9abc508e0eead302" name="a8d2ad2c011dede7b9abc508e0eead302"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8d2ad2c011dede7b9abc508e0eead302">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -797,6 +822,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::AdaptiveEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -820,6 +850,7 @@ Private Attributes</h2></td></tr>
 <p>Generates the Jacobian matrix for the active species. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3.</td></tr>
@@ -829,18 +860,18 @@ Private Attributes</h2></td></tr>
 <p>This method maps the culled abundances to the full network abundances and calls the base engine to generate the Jacobian matrix.</p>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section see"><dt>See also</dt><dd><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">AdaptiveEngineView::update()</a> </dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AdaptiveEngineView::update() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a53276f09346b531f8676db355e1219eb">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab6d95491f017feb4c43d9fa05739fcd0">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="ae894f46c67a8b8e02b8988a6b73dc9e5" name="ae894f46c67a8b8e02b8988a6b73dc9e5"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ae894f46c67a8b8e02b8988a6b73dc9e5">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
+<a id="a7ece1ddb7b891695b70566e29ed5ab8f" name="a7ece1ddb7b891695b70566e29ed5ab8f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7ece1ddb7b891695b70566e29ed5ab8f">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -851,6 +882,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::AdaptiveEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -879,6 +915,7 @@ Private Attributes</h2></td></tr>
 <p>Generates the Jacobian matrix for the active species with a given sparsity pattern. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3. </td></tr>
@@ -889,18 +926,18 @@ Private Attributes</h2></td></tr>
 <p>This method maps the culled abundances to the full network abundances and calls the base engine to generate the Jacobian matrix.</p>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section see"><dt>See also</dt><dd><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">AdaptiveEngineView::update()</a> </dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AdaptiveEngineView::update() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a51d55a21be28e372021b2b8e5ecdc551">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a78f7b315bfa0a1f34d8fd5ab652b6934">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a1b7b3b0b449d0859d57f99188cdd83d6" name="a1b7b3b0b449d0859d57f99188cdd83d6"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a1b7b3b0b449d0859d57f99188cdd83d6">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
+<a id="a6c279469be6f58b4213ea9f9cf9d07cc" name="a6c279469be6f58b4213ea9f9cf9d07cc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6c279469be6f58b4213ea9f9cf9d07cc">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -911,6 +948,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::AdaptiveEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -939,6 +981,7 @@ Private Attributes</h2></td></tr>
 <p>Generates the Jacobian matrix for some set of active species such that that set is a subset of the active species in the view. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3. </td></tr>
@@ -949,50 +992,13 @@ Private Attributes</h2></td></tr>
 <p>This method maps the culled abundances to the full network abundances and calls the base engine to generate the Jacobian matrix.</p>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section see"><dt>See also</dt><dd><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">AdaptiveEngineView::update()</a> </dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AdaptiveEngineView::update() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a15d53dac8b622a3b7d0f928a3995dbde">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a754445722193f11ae534b7c0afa9b8aa" name="a754445722193f11ae534b7c0afa9b8aa"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a754445722193f11ae534b7c0afa9b8aa">&#9670;&#160;</a></span>generateStoichiometryMatrix()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::AdaptiveEngineView::generateStoichiometryMatrix </td>
-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Generates the stoichiometry matrix for the active reactions and species. </p>
-<p>This method calls the base engine to generate the stoichiometry matrix.</p>
-<dl class="exception"><dt>Exceptions</dt><dd>
-  <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section note"><dt>Note</dt><dd>The stoichiometry matrix generated by the base engine is assumed to be consistent with the active species and reactions in this view. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5e2c45a3e415b53e41def8f743f93464">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a983551b5fef4610799c062cb5be2b1c7">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
@@ -1026,8 +1032,112 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a722ea6e07d46f739c29ad681c7500f8c" name="a722ea6e07d46f739c29ad681c7500f8c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a722ea6e07d46f739c29ad681c7500f8c">&#9670;&#160;</a></span>getNetworkReactions()</h2>
+<a id="a03857da090f2efb6d725bdd176f3e37e" name="a03857da090f2efb6d725bdd176f3e37e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a03857da090f2efb6d725bdd176f3e37e">&#9670;&#160;</a></span>getInactiveNetworkReactions()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> gridfire::engine::AdaptiveEngineView::getInactiveNetworkReactions </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Gets the set of inactive logical reactions in the network. </p>
+<dl class="section return"><dt>Returns</dt><dd><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">ReactionSet</a> containing all inactive reactions.</dd></dl>
+<p>This method returns the set of reactions that have been culled from the active network based on the adaptation criteria. </p>
+
+<p>Reimplemented from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="a4a9d62261b218d85a4a59d3402104d9b" name="a4a9d62261b218d85a4a59d3402104d9b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4a9d62261b218d85a4a59d3402104d9b">&#9670;&#160;</a></span>getInactiveReactionMolarReactionFlow()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::engine::AdaptiveEngineView::getInactiveReactionMolarReactionFlow </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Reimplemented from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="abbb82ee0db6a3c033019004ef48b1bff" name="abbb82ee0db6a3c033019004ef48b1bff"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abbb82ee0db6a3c033019004ef48b1bff">&#9670;&#160;</a></span>getMostRecentRHSCalculation()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt; gridfire::engine::AdaptiveEngineView::getMostRecentRHSCalculation </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30cc7809d53540bd3407d971de8eec48">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="a14363a95a15d66893d3bec0c3f69b34f" name="a14363a95a15d66893d3bec0c3f69b34f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a14363a95a15d66893d3bec0c3f69b34f">&#9670;&#160;</a></span>getNetworkReactions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1038,7 +1148,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp; gridfire::engine::AdaptiveEngineView::getNetworkReactions </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1052,12 +1162,12 @@ Private Attributes</h2></td></tr>
 <p>Gets the set of active logical reactions in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>Reference to the LogicalReactionSet containing all active reactions. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a26b59a4c7622bf820c0eeec6a7522aa8">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a77a889cbc3791beca4abb95cb663a4d6">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="aaa2d47f44e5bb4d9660d7c017cc5085c" name="aaa2d47f44e5bb4d9660d7c017cc5085c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aaa2d47f44e5bb4d9660d7c017cc5085c">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
+<a id="a729b8f6846cbffa746085c038108ef29" name="a729b8f6846cbffa746085c038108ef29"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a729b8f6846cbffa746085c038108ef29">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1068,7 +1178,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">const std::vector&lt; Species &gt; &amp; gridfire::engine::AdaptiveEngineView::getNetworkSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1082,12 +1192,12 @@ Private Attributes</h2></td></tr>
 <p>Gets the list of active species in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>A const reference to the vector of active species. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">gridfire::engine::Engine</a>.</p>
 
 </div>
 </div>
-<a id="acbd5b36262fa7d40f3274f4be6f0b8f6" name="acbd5b36262fa7d40f3274f4be6f0b8f6"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#acbd5b36262fa7d40f3274f4be6f0b8f6">&#9670;&#160;</a></span>getScreeningModel()</h2>
+<a id="a58d208da3143807baac98484aa260bd2" name="a58d208da3143807baac98484aa260bd2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a58d208da3143807baac98484aa260bd2">&#9670;&#160;</a></span>getScreeningModel()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1098,7 +1208,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a> gridfire::engine::AdaptiveEngineView::getScreeningModel </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1114,16 +1224,16 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>The current screening model type.</dd></dl>
 <dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line"><a class="code hl_function" href="#aea8914f56e34445aacf0a5d0af073897">AdaptiveEngineView</a> engineView(...);</div>
 <div class="line"><a class="code hl_enumeration" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a> model = engineView.getScreeningModel();</div>
-<div class="ttc" id="aclassgridfire_1_1engine_1_1_adaptive_engine_view_html_aea8914f56e34445aacf0a5d0af073897"><div class="ttname"><a href="#aea8914f56e34445aacf0a5d0af073897">gridfire::engine::AdaptiveEngineView::AdaptiveEngineView</a></div><div class="ttdeci">AdaptiveEngineView(DynamicEngine &amp;baseEngine)</div><div class="ttdoc">Constructs an AdaptiveEngineView.</div><div class="ttdef"><b>Definition</b> engine_adaptive.cpp:16</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_adaptive_engine_view_html_aea8914f56e34445aacf0a5d0af073897"><div class="ttname"><a href="#aea8914f56e34445aacf0a5d0af073897">gridfire::engine::AdaptiveEngineView::AdaptiveEngineView</a></div><div class="ttdeci">AdaptiveEngineView(DynamicEngine &amp;baseEngine)</div><div class="ttdoc">Constructs an AdaptiveEngineView.</div><div class="ttdef"><b>Definition</b> engine_adaptive.cpp:21</div></div>
 <div class="ttc" id="anamespacegridfire_1_1screening_html_aa82aafbc4f8c28d0a75b60798e3a7d25"><div class="ttname"><a href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">gridfire::screening::ScreeningType</a></div><div class="ttdeci">ScreeningType</div><div class="ttdoc">Enumerates the available plasma screening models.</div><div class="ttdef"><b>Definition</b> screening_types.h:15</div></div>
 </div><!-- fragment --> </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a24103027a38e02d4342161164554d332">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a60834e4bcfb2e4ec21a9cbf7bb9f7363">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a420666d17650736e20402514294f9a14" name="a420666d17650736e20402514294f9a14"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a420666d17650736e20402514294f9a14">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
+<a id="a6fdf4ba999ca4ee089297380f3af9249" name="a6fdf4ba999ca4ee089297380f3af9249"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6fdf4ba999ca4ee089297380f3af9249">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1134,6 +1244,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::AdaptiveEngineView::getSpeciesDestructionTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1157,6 +1272,7 @@ Private Attributes</h2></td></tr>
 <p>Computes destruction timescales for all active species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -1167,17 +1283,17 @@ Private Attributes</h2></td></tr>
 <p>This method maps the culled abundances to the full network abundances and calls the base engine to compute the species destruction timescales.</p>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
   </table>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aefc5d0f7842b27a108ba1e4ca346e9a0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a128dd0a7f738f93092c437eeda983fdf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="ad7a82578006e5c55ca7716e7ab7e710c" name="ad7a82578006e5c55ca7716e7ab7e710c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad7a82578006e5c55ca7716e7ab7e710c">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
+<a id="a46c20214859cb8e112cfffc46c54d232" name="a46c20214859cb8e112cfffc46c54d232"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a46c20214859cb8e112cfffc46c54d232">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1188,8 +1304,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">size_t gridfire::engine::AdaptiveEngineView::getSpeciesIndex </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1202,6 +1322,7 @@ Private Attributes</h2></td></tr>
 <p>Gets the index of a species in the active species list. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">species</td><td>The species for which to get the index. </td></tr>
   </table>
   </dd>
@@ -1209,18 +1330,18 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>The index of the species in the active species list.</dd></dl>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
     <tr><td class="paramname">std::out_of_range</td><td>If the species is not part of the active species in the adaptive engine view. </td></tr>
   </table>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac0f40017603e8e6887b75dc7360d7c5e">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a16bd2fae51fa738da62f2a767f6875d2">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a5166197fd61060b2a9a445f707ee871b" name="a5166197fd61060b2a9a445f707ee871b"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a5166197fd61060b2a9a445f707ee871b">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
+<a id="af9de6a43920f64202c865d45ee131e10" name="af9de6a43920f64202c865d45ee131e10"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af9de6a43920f64202c865d45ee131e10">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1231,8 +1352,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a> gridfire::engine::AdaptiveEngineView::getSpeciesStatus </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1245,19 +1370,20 @@ Private Attributes</h2></td></tr>
 <p>Gets the status of a species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">species</td><td>The species for which to get the status. </td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>The <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a> indicating the status of the species.</dd></dl>
-<p>This method delegates the call to the base engine to get the species status. If the base engine says that the species is active but it is not in the active species list of this view, the status is returned as INACTIVE_FLOW. </p>
+<p>This method delegates the call to the base engine to get the species status. If the base engine says that the species is active, but it is not in the active species list of this view, the status is returned as INACTIVE_FLOW. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8aebefad50c1aa34207e118e92d7ccf0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a1fefd34491959f9936b7a065fc2d6274">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="ade5dad29a79209e677b259a9b28c5133" name="ade5dad29a79209e677b259a9b28c5133"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ade5dad29a79209e677b259a9b28c5133">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
+<a id="aae66fd327dc4d0e1a0e54a6e05a77e47" name="aae66fd327dc4d0e1a0e54a6e05a77e47"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aae66fd327dc4d0e1a0e54a6e05a77e47">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1268,6 +1394,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::AdaptiveEngineView::getSpeciesTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1291,6 +1422,7 @@ Private Attributes</h2></td></tr>
 <p>Computes timescales for all active species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -1301,153 +1433,17 @@ Private Attributes</h2></td></tr>
 <p>This method maps the culled abundances to the full network abundances and calls the base engine to compute the species timescales.</p>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code>update()</code> has not been called). </td></tr>
   </table>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aef6ed91d922c0b1733fd7835e99d0efe">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a92be21f072b61fcf291559246045801f">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="aae6d8bab169721f0b89682ce8c4b4f10" name="aae6d8bab169721f0b89682ce8c4b4f10"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aae6d8bab169721f0b89682ce8c4b4f10">&#9670;&#160;</a></span>getStoichiometryMatrixEntry()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">int gridfire::engine::AdaptiveEngineView::getStoichiometryMatrixEntry </td>
-          <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Gets an entry from the stoichiometry matrix for the active species and reactions. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">species</td><td>The species for which to get the stoichiometric coefficient. </td></tr>
-    <tr><td class="paramname">reaction</td><td>The reaction for which to get the stoichiometric coefficient. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>The stoichiometric coefficient for the given species and reaction.</dd></dl>
-<p>This method maps the culled indices to the full network indices and calls the base engine to get the stoichiometry matrix entry.</p>
-<dl class="exception"><dt>Exceptions</dt><dd>
-  <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
-    <tr><td class="paramname">std::out_of_range</td><td>If the culled index is out of bounds for the species or reaction index map. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section see"><dt>See also</dt><dd><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">AdaptiveEngineView::update()</a> </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a6c08b4235996d12472d2a327eab8e984" name="a6c08b4235996d12472d2a327eab8e984"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6c08b4235996d12472d2a327eab8e984">&#9670;&#160;</a></span>isStale()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">bool gridfire::engine::AdaptiveEngineView::isStale </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Check if the engine's internal state is stale. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>A struct containing the current network input, such as temperature, density, and composition. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>True if the engine's state is stale and needs to be updated; false otherwise.</dd></dl>
-<p>This method allows derived classes to determine if their internal state is out-of-date with respect to the provided network conditions. If the engine is stale, it may require a call to <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> before performing calculations.</p>
-<dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1_net_in.html">NetIn</a> input = { ... };</div>
-<div class="line"><span class="keywordflow">if</span> (myEngine.isStale(input)) {</div>
-<div class="line">    <span class="comment">// Update the engine before proceeding</span></div>
-<div class="line">}</div>
-<div class="ttc" id="astructgridfire_1_1_net_in_html"><div class="ttname"><a href="structgridfire_1_1_net_in.html">gridfire::NetIn</a></div><div class="ttdef"><b>Definition</b> types.h:27</div></div>
-</div><!-- fragment --> </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a79423b9f67b4cac702547b4f1d8bd14c">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a24cc7e1a7471d707707b4d44ebd81068" name="a24cc7e1a7471d707707b4d44ebd81068"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a24cc7e1a7471d707707b4d44ebd81068">&#9670;&#160;</a></span>mapNetInToMolarAbundanceVector()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">std::vector&lt; double &gt; gridfire::engine::AdaptiveEngineView::mapNetInToMolarAbundanceVector </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Maps the molar abundance vector from the active species to the full network species. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The current network input, containing temperature, density, and composition. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>A vector of molar abundances for all species in the full network.</dd></dl>
-<p>This method constructs a molar abundance vector for the full network by mapping the abundances from the active species in <code>netIn</code> to their corresponding indices in the full network. Species not present in <code>netIn</code> are assigned an abundance of zero.</p>
-<dl class="exception"><dt>Exceptions</dt><dd>
-  <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
-  </table>
-  </dd>
-</dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa9d55b81c1963113aad86aa60c19676f">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a955a337f89a375637ac48071be45c54c" name="a955a337f89a375637ac48071be45c54c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a955a337f89a375637ac48071be45c54c">&#9670;&#160;</a></span>primeEngine()</h2>
+<a id="a27bb70d1426d6030779d83247a87b4a5" name="a27bb70d1426d6030779d83247a87b4a5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a27bb70d1426d6030779d83247a87b4a5">&#9670;&#160;</a></span>primeEngine()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1458,8 +1454,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a> gridfire::engine::AdaptiveEngineView::primeEngine </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1472,6 +1472,7 @@ Private Attributes</h2></td></tr>
 <p>Primes the engine with the given network input. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">netIn</td><td>The current network input, containing temperature, density, and composition. </td></tr>
   </table>
   </dd>
@@ -1479,12 +1480,12 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>A <a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" title="Captures the result of a network priming operation.">PrimingReport</a> indicating the result of the priming operation.</dd></dl>
 <p>This method delegates the priming operation to the base engine. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a70e270bb50910c0055a75575c1ef1e95">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30df09678c3de1a55b7c6ac5eae35004">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a85e70c0ff022c31702472aa39fc64816" name="a85e70c0ff022c31702472aa39fc64816"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a85e70c0ff022c31702472aa39fc64816">&#9670;&#160;</a></span>rescueEdgeSpeciesDestructionChannel()</h2>
+<a id="aa7b6561da6dd8513fef5c8c03737d433" name="aa7b6561da6dd8513fef5c8c03737d433"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa7b6561da6dd8513fef5c8c03737d433">&#9670;&#160;</a></span>project()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1493,132 +1494,14 @@ Private Attributes</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="#a21367fa61169e6f5185bc91b40cc04be">AdaptiveEngineView::RescueSet</a> gridfire::engine::AdaptiveEngineView::rescueEdgeSpeciesDestructionChannel </td>
+          <td class="memname">fourdst::composition::Composition gridfire::engine::AdaptiveEngineView::project </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const std::vector&lt; fourdst::atomic::Species &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>activeSpecies</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>activeReactions</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-</div>
-</div>
-<a id="a5dbfcafa606c3242dc4ced62c2494a2d" name="a5dbfcafa606c3242dc4ced62c2494a2d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a5dbfcafa606c3242dc4ced62c2494a2d">&#9670;&#160;</a></span>setNetworkReactions()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::AdaptiveEngineView::setNetworkReactions </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Sets the reaction set for the base engine. </p>
-<p>This method delegates the call to the base engine to set the reaction set.</p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">reactions</td><td>The <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">ReactionSet</a> to set in the base engine.</td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section post"><dt>Postcondition</dt><dd>The reaction set of the base engine is updated. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab321170954bffc53b1bedaf54f6976be">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="ab050409db954a3fa593633f9d2cd5d89" name="ab050409db954a3fa593633f9d2cd5d89"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ab050409db954a3fa593633f9d2cd5d89">&#9670;&#160;</a></span>setScreeningModel()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::AdaptiveEngineView::setScreeningModel </td>
-          <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a></td>          <td class="paramname"><span class="paramname"><em>model</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Sets the screening model for the base engine. </p>
-<p>This method delegates the call to the base engine to set the electron screening model.</p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">model</td><td>The electron screening model to set.</td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line"><a class="code hl_function" href="#aea8914f56e34445aacf0a5d0af073897">AdaptiveEngineView</a> engineView(...);</div>
-<div class="line">engineView.setScreeningModel(<a class="code hl_enumvalue" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">screening::ScreeningType::WEAK</a>);</div>
-<div class="ttc" id="anamespacegridfire_1_1screening_html_aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8"><div class="ttname"><a href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">gridfire::screening::ScreeningType::WEAK</a></div><div class="ttdeci">@ WEAK</div><div class="ttdoc">Weak screening model (Salpeter, 1954).</div><div class="ttdef"><b>Definition</b> screening_types.h:35</div></div>
-</div><!-- fragment --></dd></dl>
-<dl class="section post"><dt>Postcondition</dt><dd>The screening model of the base engine is updated. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a50e76977d0dc3cc23d52b51842d35003">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a8db6ba52f454c136ee0a1335436fab6e" name="a8db6ba52f454c136ee0a1335436fab6e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8db6ba52f454c136ee0a1335436fab6e">&#9670;&#160;</a></span>update()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">fourdst::composition::Composition gridfire::engine::AdaptiveEngineView::update </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1631,6 +1514,7 @@ Private Attributes</h2></td></tr>
 <p>Updates the active species and reactions based on the current conditions. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for storing thread-local data. </td></tr>
     <tr><td class="paramname">netIn</td><td>The current network input, containing temperature, density, and composition.</td></tr>
   </table>
   </dd>
@@ -1652,12 +1536,12 @@ AdaptiveEngineView::constructSpeciesIndexMap() </dd>
 <dd>
 AdaptiveEngineView::constructReactionIndexMap() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8dd85442ec54f20d91743c72364e36ff">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a260d36cc1e14ca8eda0309745e9134d9">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a63837a6a4343a2ac6a61e21576b62655" name="a63837a6a4343a2ac6a61e21576b62655"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a63837a6a4343a2ac6a61e21576b62655">&#9670;&#160;</a></span>validateState()</h2>
+<a id="a2739af9799f5b720a154d2f862ab7c30" name="a2739af9799f5b720a154d2f862ab7c30"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2739af9799f5b720a154d2f862ab7c30">&#9670;&#160;</a></span>rescueEdgeSpeciesDestructionChannel()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1666,78 +1550,36 @@ AdaptiveEngineView::constructReactionIndexMap() </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">void gridfire::engine::AdaptiveEngineView::validateState </td>
+          <td class="memname"><a class="el" href="#a21367fa61169e6f5185bc91b40cc04be">AdaptiveEngineView::RescueSet</a> gridfire::engine::AdaptiveEngineView::rescueEdgeSpeciesDestructionChannel </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel private">private</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Validates that the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is not stale. </p>
-<dl class="exception"><dt>Exceptions</dt><dd>
-  <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> is stale (i.e., <code><a class="el" href="#a8db6ba52f454c136ee0a1335436fab6e" title="Updates the active species and reactions based on the current conditions.">update()</a></code> has not been called). </td></tr>
-  </table>
-  </dd>
-</dl>
-
 </div>
 </div>
 <h2 class="groupheader">Member Data Documentation</h2>
-<a id="a90a8fa566ca9fe2b74427ea497353e1b" name="a90a8fa566ca9fe2b74427ea497353e1b"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a90a8fa566ca9fe2b74427ea497353e1b">&#9670;&#160;</a></span>m_activeReactions</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> gridfire::engine::AdaptiveEngineView::m_activeReactions</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>The set of reactions that are currently active in the network. </p>
-
-</div>
-</div>
-<a id="a8c7bf0f0e5ad83821e3959c47c81cd60" name="a8c7bf0f0e5ad83821e3959c47c81cd60"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8c7bf0f0e5ad83821e3959c47c81cd60">&#9670;&#160;</a></span>m_activeSpecies</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">std::vector&lt;fourdst::atomic::Species&gt; gridfire::engine::AdaptiveEngineView::m_activeSpecies</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>The set of species that are currently active in the network. </p>
-
-</div>
-</div>
 <a id="a541f54469c3d2d6ab7671b19057b4341" name="a541f54469c3d2d6ab7671b19057b4341"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#a541f54469c3d2d6ab7671b19057b4341">&#9670;&#160;</a></span>m_baseEngine</h2>
 
@@ -1762,8 +1604,8 @@ AdaptiveEngineView::constructReactionIndexMap() </dd></dl>
 
 </div>
 </div>
-<a id="ac68b44310985613bb5736dd32d415734" name="ac68b44310985613bb5736dd32d415734"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac68b44310985613bb5736dd32d415734">&#9670;&#160;</a></span>m_config</h2>
+<a id="a3f1e5262ed902b08b73a97c6a41133c8" name="a3f1e5262ed902b08b73a97c6a41133c8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3f1e5262ed902b08b73a97c6a41133c8">&#9670;&#160;</a></span>m_config</h2>
 
 <div class="memitem">
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@@ -1772,7 +1614,7 @@ AdaptiveEngineView::constructReactionIndexMap() </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
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diff --git a/docs/html/classgridfire_1_1engine_1_1_defined_engine_view-members.html b/docs/html/classgridfire_1_1engine_1_1_defined_engine_view-members.html
index eaa605f3..ed6c5433 100644
--- a/docs/html/classgridfire_1_1engine_1_1_defined_engine_view-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_defined_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,48 +105,38 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_defined_engine_view.html',
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2a866a7ba9572d36efab8efe72a063f5">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2f0ad1febc467bce87b5c6ad29b059fb">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a82cbef591ef1aafcb9a42e01bf38fc38">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a38191e2b3b219d348eba0109dce271c3">collect</a>(const std::vector&lt; std::string &gt; &amp;peNames)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25dc44af1a58561b665103b16abe9bbc">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8464c50142f34583201c4abc7fbcba36">constructReactionIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a20b54c8b13616982eddb3ae3979b842d">constructSpeciesIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ada2f326789dc8ae8305617c8d700ae05">DefinedEngineView</a>(const std::vector&lt; std::string &gt; &amp;peNames, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4d90439d99da61107d95319b970760bc">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4966f8cbc859ce2a8a465516d0c0abd0">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1de5867a0e633de0d0d96ac4fbb141e5">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af4049e5570bd143d41cab1d4005b6824">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6e0458acf7855ff6472b96801048479">calculateEpsDerivatives</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb78ba1245f5b61a29d6163c4548f6b6">calculateMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a297412202e82ab25b6fc0a8a27a433e7">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a59680b2c95412edc7d9cda939282f2e1">collect</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; std::string &gt; &amp;peNames) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4002e188995b6c203dc391f381432e5b">collectComposition</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af058b09a44f30332eece13f0d4ce9d9d">constructReactionIndexMap</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a85db72e3c0a4ce59345b6b92695a5d12">constructSpeciesIndexMap</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ac126bed6dcdfa6b2888efa3a769b4490">constructStateBlob</a>(const scratch::StateBlob *blob) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ada2f326789dc8ae8305617c8d700ae05">DefinedEngineView</a>(const std::vector&lt; std::string &gt; &amp;peNames, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa7d5c9288cfe23aa4435a89210280d83">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1457e3aa9caae5d2fba17adc62f47c79">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a37ba76a5a0d0cb46d93df1982f196f11">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6f82ef31b99bfe8a6c4e475bcdb96f8">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac5a0def6b6af0bd93bf9057c25f048ff">getDepth</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a81732c1b2d08451849c1ddf833246892">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a0af3e1ac0314a485171f1dda39929cb4">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a413b111f6a643d7aecbae01dd0f82640">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab051d976dbecf325747d54efe7834d04">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb3c67ce20746b9acb2766920b8f397b">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a65af092785759559f4697c7e66bef2e3">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1edda1a27247480660cf7a63410f5799">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a600dd38a6011089527024f1625130935">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a6ef3052fce2d5e4fdaec6659df64c2bc">isStale</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae8ac4dc44a6c9f3588d6dd02b39a4cc9">m_activeReactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aad986ed7c9602ba042999cf0a30ed70c">m_activeSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#add093054fe3ba60f99b04f7f3bda4ba3">m_activeSpeciesVectorCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1e46935f049537e675fb132564d6eacd">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3156dfef68cd3636f8cf7a13b5388e75">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3ba348cf85f0098071d23b0a3cea7078">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa9a26262300b0982b847a72425dc373a">m_reactionIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a26af4be40216ee3ea5b7fff49fe7a00c">m_speciesIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a391bc4b5d946ea606cf7661955191d12">mapFullToView</a>(const std::vector&lt; double &gt; &amp;full) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa053696a7885b8e42562b2d22ee32d84">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa352f3ba0e689d3f81711c17f4f67dfc">mapViewToFull</a>(const std::vector&lt; double &gt; &amp;defined) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afa9aeb6d11645e4b9cecf56fb63b51ef">mapViewToFullReactionIndex</a>(size_t definedReactionIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ad6986fa5cda1d9ed9d4f54f444f402e8">mapViewToFullSpeciesIndex</a>(size_t definedSpeciesIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2bc32a84c9f5372587fca92f2da77595">primeEngine</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae89529e13f2b7fd2febcfa5af40d4666">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a68bd0e51d3e127e5f9fd74fdb8180fd9">setScreeningModel</a>(screening::ScreeningType model) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1d99b55bf8e94bc2397715aa1f916733">update</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a91ea88e43c17f99ff0d95a8f54b09cbf">validateNetworkState</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8d2685b85a46c3979ca23db7eaa618b5">getMostRecentRHSCalculation</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#acec78c23ab9a29c6fe930cb54388e6eb">getNetworkReactions</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8dfbe8792e112e33623cf5bf44696376">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a112fa152ca631af4dfd053e8689af7f5">getScreeningModel</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a992c39d65298e3b58e529825889b7eea">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a318de224195e7c953922c9f9ccfb8652">getSpeciesIndex</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab8b22ee7d51ce5cc762759946967852c">getSpeciesStatus</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae1d570486213d9bfc018a2f1ac3d4a21">getSpeciesTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1e46935f049537e675fb132564d6eacd">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3156dfef68cd3636f8cf7a13b5388e75">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3ba348cf85f0098071d23b0a3cea7078">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a47fc5027c1d787319f691751a0e043c7">mapFullToView</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;full)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a189092508a38a8f78b432d9470dd2e7f">mapViewToFull</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;defined) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af184e1166e3a0a74418af17226995c74">mapViewToFullReactionIndex</a>(scratch::StateBlob &amp;ctx, size_t definedReactionIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a9d28efabfafecf32b9f7e11164856132">mapViewToFullSpeciesIndex</a>(scratch::StateBlob &amp;ctx, size_t definedSpeciesIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25946bd58144c69152a7992dd2e093cc">primeEngine</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af52e0ce2ce80f08642c9a6dbf0adc929">project</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
diff --git a/docs/html/classgridfire_1_1engine_1_1_defined_engine_view.html b/docs/html/classgridfire_1_1engine_1_1_defined_engine_view.html
index 39d74bdb..e05050f4 100644
--- a/docs/html/classgridfire_1_1engine_1_1_defined_engine_view.html
+++ b/docs/html/classgridfire_1_1engine_1_1_defined_engine_view.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -103,6 +103,7 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_defined_engine_view.html',
 <a href="#pub-methods">Public Member Functions</a> &#124;
 <a href="#pro-attribs">Protected Attributes</a> &#124;
 <a href="#pri-methods">Private Member Functions</a> &#124;
+<a href="#pri-static-methods">Static Private Member Functions</a> &#124;
 <a href="#pri-attribs">Private Attributes</a> &#124;
 <a href="classgridfire_1_1engine_1_1_defined_engine_view-members.html">List of all members</a>  </div>
   <div class="headertitle"><div class="title">gridfire::engine::DefinedEngineView Class Reference</div></div>
@@ -128,79 +129,64 @@ Public Member Functions</h2></td></tr>
 <tr class="memitem:ab6f82ef31b99bfe8a6c4e475bcdb96f8" id="r_ab6f82ef31b99bfe8a6c4e475bcdb96f8"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab6f82ef31b99bfe8a6c4e475bcdb96f8">getBaseEngine</a> () const override</td></tr>
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-<tr class="memitem:a0af3e1ac0314a485171f1dda39929cb4" id="r_a0af3e1ac0314a485171f1dda39929cb4"><td class="memItemLeft" align="right" valign="top">const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0af3e1ac0314a485171f1dda39929cb4">getNetworkSpecies</a> () const override</td></tr>
-<tr class="memdesc:a0af3e1ac0314a485171f1dda39929cb4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Gets the list of active species in the network defined by the file.  <br /></td></tr>
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-<tr class="memdesc:a82cbef591ef1aafcb9a42e01bf38fc38"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculates the right-hand side (dY/dt) and energy generation for the active species.  <br /></td></tr>
-<tr class="separator:a82cbef591ef1aafcb9a42e01bf38fc38"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a2a866a7ba9572d36efab8efe72a063f5" id="r_a2a866a7ba9572d36efab8efe72a063f5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">EnergyDerivatives</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2a866a7ba9572d36efab8efe72a063f5">calculateEpsDerivatives</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td></tr>
-<tr class="memdesc:a2a866a7ba9572d36efab8efe72a063f5"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the derivatives of the energy generation rate with respect to T and rho.  <br /></td></tr>
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-<tr class="memitem:a4d90439d99da61107d95319b970760bc" id="r_a4d90439d99da61107d95319b970760bc"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4d90439d99da61107d95319b970760bc">generateJacobianMatrix</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td></tr>
-<tr class="memdesc:a4d90439d99da61107d95319b970760bc"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generates the Jacobian matrix for the active species.  <br /></td></tr>
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 <tr class="inherit_header pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1engine_1_1_dynamic_engine')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td></tr>
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+<tr class="memdesc:af058b09a44f30332eece13f0d4ce9d9d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs the reaction index map.  <br /></td></tr>
+<tr class="separator:af058b09a44f30332eece13f0d4ce9d9d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a189092508a38a8f78b432d9470dd2e7f" id="r_a189092508a38a8f78b432d9470dd2e7f"><td class="memItemLeft" align="right" valign="top">std::vector&lt; double &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a189092508a38a8f78b432d9470dd2e7f">mapViewToFull</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; double &gt; &amp;defined) const</td></tr>
+<tr class="memdesc:a189092508a38a8f78b432d9470dd2e7f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps a vector of culled abundances to a vector of full abundances.  <br /></td></tr>
+<tr class="separator:a189092508a38a8f78b432d9470dd2e7f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a9d28efabfafecf32b9f7e11164856132" id="r_a9d28efabfafecf32b9f7e11164856132"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a9d28efabfafecf32b9f7e11164856132">mapViewToFullSpeciesIndex</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, size_t definedSpeciesIndex) const</td></tr>
+<tr class="memdesc:a9d28efabfafecf32b9f7e11164856132"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps a culled species index to a full species index.  <br /></td></tr>
+<tr class="separator:a9d28efabfafecf32b9f7e11164856132"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af184e1166e3a0a74418af17226995c74" id="r_af184e1166e3a0a74418af17226995c74"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af184e1166e3a0a74418af17226995c74">mapViewToFullReactionIndex</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, size_t definedReactionIndex) const</td></tr>
+<tr class="memdesc:af184e1166e3a0a74418af17226995c74"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps a culled reaction index to a full reaction index.  <br /></td></tr>
+<tr class="separator:af184e1166e3a0a74418af17226995c74"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a59680b2c95412edc7d9cda939282f2e1" id="r_a59680b2c95412edc7d9cda939282f2e1"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a59680b2c95412edc7d9cda939282f2e1">collect</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; std::string &gt; &amp;peNames) const</td></tr>
+<tr class="separator:a59680b2c95412edc7d9cda939282f2e1"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-static-methods" name="pri-static-methods"></a>
+Static Private Member Functions</h2></td></tr>
+<tr class="memitem:a47fc5027c1d787319f691751a0e043c7" id="r_a47fc5027c1d787319f691751a0e043c7"><td class="memItemLeft" align="right" valign="top">static std::vector&lt; double &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a47fc5027c1d787319f691751a0e043c7">mapFullToView</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; double &gt; &amp;full)</td></tr>
+<tr class="memdesc:a47fc5027c1d787319f691751a0e043c7"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps a vector of full abundances to a vector of culled abundances.  <br /></td></tr>
+<tr class="separator:a47fc5027c1d787319f691751a0e043c7"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
 Private Attributes</h2></td></tr>
-<tr class="memitem:a3ba348cf85f0098071d23b0a3cea7078" id="r_a3ba348cf85f0098071d23b0a3cea7078"><td class="memItemLeft" align="right" valign="top">quill::Logger *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3ba348cf85f0098071d23b0a3cea7078">m_logger</a> = fourdst::logging::LogManager::getInstance().getLogger(&quot;log&quot;)</td></tr>
-<tr class="memdesc:a3ba348cf85f0098071d23b0a3cea7078"><td class="mdescLeft">&#160;</td><td class="mdescRight">Active species in the defined engine.  <br /></td></tr>
+<tr class="memitem:a3ba348cf85f0098071d23b0a3cea7078" id="r_a3ba348cf85f0098071d23b0a3cea7078"><td class="memItemLeft" align="right" valign="top">quill::Logger *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3ba348cf85f0098071d23b0a3cea7078">m_logger</a> = LogManager::getInstance().getLogger(&quot;log&quot;)</td></tr>
+<tr class="memdesc:a3ba348cf85f0098071d23b0a3cea7078"><td class="mdescLeft">&#160;</td><td class="mdescRight">Logger instance for trace and debug information.  <br /></td></tr>
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-<tr class="memitem:aad986ed7c9602ba042999cf0a30ed70c" id="r_aad986ed7c9602ba042999cf0a30ed70c"><td class="memItemLeft" align="right" valign="top">std::set&lt; fourdst::atomic::Species &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aad986ed7c9602ba042999cf0a30ed70c">m_activeSpecies</a></td></tr>
-<tr class="memdesc:aad986ed7c9602ba042999cf0a30ed70c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cache for the active species vector to avoid dangling references.  <br /></td></tr>
-<tr class="separator:aad986ed7c9602ba042999cf0a30ed70c"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:add093054fe3ba60f99b04f7f3bda4ba3" id="r_add093054fe3ba60f99b04f7f3bda4ba3"><td class="memItemLeft" align="right" valign="top">std::optional&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#add093054fe3ba60f99b04f7f3bda4ba3">m_activeSpeciesVectorCache</a> = std::nullopt</td></tr>
-<tr class="memdesc:add093054fe3ba60f99b04f7f3bda4ba3"><td class="mdescLeft">&#160;</td><td class="mdescRight">Active reactions in the defined engine.  <br /></td></tr>
-<tr class="separator:add093054fe3ba60f99b04f7f3bda4ba3"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ae8ac4dc44a6c9f3588d6dd02b39a4cc9" id="r_ae8ac4dc44a6c9f3588d6dd02b39a4cc9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae8ac4dc44a6c9f3588d6dd02b39a4cc9">m_activeReactions</a></td></tr>
-<tr class="memdesc:ae8ac4dc44a6c9f3588d6dd02b39a4cc9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps indices of active species to indices in the full network.  <br /></td></tr>
-<tr class="separator:ae8ac4dc44a6c9f3588d6dd02b39a4cc9"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a26af4be40216ee3ea5b7fff49fe7a00c" id="r_a26af4be40216ee3ea5b7fff49fe7a00c"><td class="memItemLeft" align="right" valign="top">std::vector&lt; size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a26af4be40216ee3ea5b7fff49fe7a00c">m_speciesIndexMap</a></td></tr>
-<tr class="memdesc:a26af4be40216ee3ea5b7fff49fe7a00c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps indices of active reactions to indices in the full network.  <br /></td></tr>
-<tr class="separator:a26af4be40216ee3ea5b7fff49fe7a00c"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:aa9a26262300b0982b847a72425dc373a" id="r_aa9a26262300b0982b847a72425dc373a"><td class="memItemLeft" align="right" valign="top">std::vector&lt; size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa9a26262300b0982b847a72425dc373a">m_reactionIndexMap</a></td></tr>
-<tr class="separator:aa9a26262300b0982b847a72425dc373a"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
 <a id="ada2f326789dc8ae8305617c8d700ae05" name="ada2f326789dc8ae8305617c8d700ae05"></a>
@@ -285,8 +258,8 @@ Private Attributes</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a2a866a7ba9572d36efab8efe72a063f5" name="a2a866a7ba9572d36efab8efe72a063f5"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2a866a7ba9572d36efab8efe72a063f5">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
+<a id="ab6e0458acf7855ff6472b96801048479" name="ab6e0458acf7855ff6472b96801048479"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab6e0458acf7855ff6472b96801048479">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -297,6 +270,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">EnergyDerivatives</a> gridfire::engine::DefinedEngineView::calculateEpsDerivatives </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -329,12 +307,12 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html" title="Structure holding derivatives of energy generation rate with respect to T and rho.">EnergyDerivatives</a> containing dEps/dT and dEps/dRho.</dd></dl>
 <p>This method computes the partial derivatives of the specific nuclear energy generation rate with respect to temperature and density for the current state. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ada6a1295a92c2aede841672ecae0cede">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a3fd5d4f3c58d1790b7a517b5ef888eaf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a2f0ad1febc467bce87b5c6ad29b059fb" name="a2f0ad1febc467bce87b5c6ad29b059fb"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2f0ad1febc467bce87b5c6ad29b059fb">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
+<a id="afb78ba1245f5b61a29d6163c4548f6b6" name="afb78ba1245f5b61a29d6163c4548f6b6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afb78ba1245f5b61a29d6163c4548f6b6">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -345,6 +323,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">double gridfire::engine::DefinedEngineView::calculateMolarReactionFlow </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
         </tr>
         <tr>
@@ -388,12 +371,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa57fa5e58b98a03fba31bcddda8001d4">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#abf0f13b9eae66da6119e6fca826379e8">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a82cbef591ef1aafcb9a42e01bf38fc38" name="a82cbef591ef1aafcb9a42e01bf38fc38"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a82cbef591ef1aafcb9a42e01bf38fc38">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
+<a id="a297412202e82ab25b6fc0a8a27a433e7" name="a297412202e82ab25b6fc0a8a27a433e7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a297412202e82ab25b6fc0a8a27a433e7">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -404,6 +387,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::DefinedEngineView::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -414,7 +402,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -430,23 +423,24 @@ Private Attributes</h2></td></tr>
     <tr><td class="paramname">comp</td><td>A Composition object containing the current composition of the system </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td></td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html" title="Structure holding derivatives and energy generation for a network step.">StepDerivatives</a> struct containing the derivatives of the active species and the nuclear energy generation rate.</dd></dl>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the view is stale (i.e., <code><a class="el" href="#a1d99b55bf8e94bc2397715aa1f916733" title="Updates the engine view if it is marked as stale.">update()</a></code> has not been called after <code>setNetworkFile()</code>). </td></tr>
+    <tr><td class="paramname">std::runtime_error</td><td>If the view is stale (i.e., <code>update()</code> has not been called after <code>setNetworkFile()</code>). </td></tr>
   </table>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>.</p>
 
 </div>
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-<a id="a38191e2b3b219d348eba0109dce271c3" name="a38191e2b3b219d348eba0109dce271c3"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a38191e2b3b219d348eba0109dce271c3">&#9670;&#160;</a></span>collect()</h2>
+<a id="a59680b2c95412edc7d9cda939282f2e1" name="a59680b2c95412edc7d9cda939282f2e1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a59680b2c95412edc7d9cda939282f2e1">&#9670;&#160;</a></span>collect()</h2>
 
 <div class="memitem">
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@@ -457,8 +451,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">void gridfire::engine::DefinedEngineView::collect </td>
           <td>(</td>
-          <td class="paramtype">const std::vector&lt; std::string &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>peNames</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const std::vector&lt; std::string &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>peNames</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -470,8 +468,8 @@ Private Attributes</h2></td></tr>
 
 </div>
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-<a id="a25dc44af1a58561b665103b16abe9bbc" name="a25dc44af1a58561b665103b16abe9bbc"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a25dc44af1a58561b665103b16abe9bbc">&#9670;&#160;</a></span>collectComposition()</h2>
+<a id="a4002e188995b6c203dc391f381432e5b" name="a4002e188995b6c203dc391f381432e5b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4002e188995b6c203dc391f381432e5b">&#9670;&#160;</a></span>collectComposition()</h2>
 
 <div class="memitem">
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@@ -482,6 +480,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">fourdst::composition::Composition gridfire::engine::DefinedEngineView::collectComposition </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -513,12 +516,12 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A composition object representing the state of the engine stack and the current view. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a41877719ae5e8de53c1692c7cf9bfbfc">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">gridfire::engine::DynamicEngine</a>.</p>
 
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-<h2 class="memtitle"><span class="permalink"><a href="#a8464c50142f34583201c4abc7fbcba36">&#9670;&#160;</a></span>constructReactionIndexMap()</h2>
+<a id="af058b09a44f30332eece13f0d4ce9d9d" name="af058b09a44f30332eece13f0d4ce9d9d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af058b09a44f30332eece13f0d4ce9d9d">&#9670;&#160;</a></span>constructReactionIndexMap()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -529,7 +532,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; size_t &gt; gridfire::engine::DefinedEngineView::constructReactionIndexMap </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -552,8 +555,8 @@ Private Attributes</h2></td></tr>
 
 </div>
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-<a id="a20b54c8b13616982eddb3ae3979b842d" name="a20b54c8b13616982eddb3ae3979b842d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a20b54c8b13616982eddb3ae3979b842d">&#9670;&#160;</a></span>constructSpeciesIndexMap()</h2>
+<a id="a85db72e3c0a4ce59345b6b92695a5d12" name="a85db72e3c0a4ce59345b6b92695a5d12"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a85db72e3c0a4ce59345b6b92695a5d12">&#9670;&#160;</a></span>constructSpeciesIndexMap()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -564,7 +567,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; size_t &gt; gridfire::engine::DefinedEngineView::constructSpeciesIndexMap </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -587,8 +590,35 @@ Private Attributes</h2></td></tr>
 
 </div>
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-<a id="a4d90439d99da61107d95319b970760bc" name="a4d90439d99da61107d95319b970760bc"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a4d90439d99da61107d95319b970760bc">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
+<a id="ac126bed6dcdfa6b2888efa3a769b4490" name="ac126bed6dcdfa6b2888efa3a769b4490"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac126bed6dcdfa6b2888efa3a769b4490">&#9670;&#160;</a></span>constructStateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &gt; gridfire::engine::DefinedEngineView::constructStateBlob </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> *</td>          <td class="paramname"><span class="paramname"><em>blob</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="aa7d5c9288cfe23aa4435a89210280d83" name="aa7d5c9288cfe23aa4435a89210280d83"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa7d5c9288cfe23aa4435a89210280d83">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -599,6 +629,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::DefinedEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -635,12 +670,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a53276f09346b531f8676db355e1219eb">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab6d95491f017feb4c43d9fa05739fcd0">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a1de5867a0e633de0d0d96ac4fbb141e5" name="a1de5867a0e633de0d0d96ac4fbb141e5"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a1de5867a0e633de0d0d96ac4fbb141e5">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
+<a id="a37ba76a5a0d0cb46d93df1982f196f11" name="a37ba76a5a0d0cb46d93df1982f196f11"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a37ba76a5a0d0cb46d93df1982f196f11">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -651,6 +686,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::DefinedEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -693,12 +733,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a51d55a21be28e372021b2b8e5ecdc551">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a78f7b315bfa0a1f34d8fd5ab652b6934">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="a4966f8cbc859ce2a8a465516d0c0abd0" name="a4966f8cbc859ce2a8a465516d0c0abd0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a4966f8cbc859ce2a8a465516d0c0abd0">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
+<a id="a1457e3aa9caae5d2fba17adc62f47c79" name="a1457e3aa9caae5d2fba17adc62f47c79"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1457e3aa9caae5d2fba17adc62f47c79">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -709,6 +749,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::DefinedEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -751,42 +796,7 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a15d53dac8b622a3b7d0f928a3995dbde">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="af4049e5570bd143d41cab1d4005b6824" name="af4049e5570bd143d41cab1d4005b6824"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#af4049e5570bd143d41cab1d4005b6824">&#9670;&#160;</a></span>generateStoichiometryMatrix()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::DefinedEngineView::generateStoichiometryMatrix </td>
-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Generates the stoichiometry matrix for the active reactions and species. </p>
-<dl class="exception"><dt>Exceptions</dt><dd>
-  <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the view is stale. </td></tr>
-  </table>
-  </dd>
-</dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5e2c45a3e415b53e41def8f743f93464">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a983551b5fef4610799c062cb5be2b1c7">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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@@ -820,8 +830,35 @@ Private Attributes</h2></td></tr>
 
 </div>
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-<a id="a81732c1b2d08451849c1ddf833246892" name="a81732c1b2d08451849c1ddf833246892"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a81732c1b2d08451849c1ddf833246892">&#9670;&#160;</a></span>getNetworkReactions()</h2>
+<a id="a8d2685b85a46c3979ca23db7eaa618b5" name="a8d2685b85a46c3979ca23db7eaa618b5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8d2685b85a46c3979ca23db7eaa618b5">&#9670;&#160;</a></span>getMostRecentRHSCalculation()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt; gridfire::engine::DefinedEngineView::getMostRecentRHSCalculation </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30cc7809d53540bd3407d971de8eec48">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="acec78c23ab9a29c6fe930cb54388e6eb" name="acec78c23ab9a29c6fe930cb54388e6eb"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acec78c23ab9a29c6fe930cb54388e6eb">&#9670;&#160;</a></span>getNetworkReactions()</h2>
 
 <div class="memitem">
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           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
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@@ -852,12 +889,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a26b59a4c7622bf820c0eeec6a7522aa8">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a77a889cbc3791beca4abb95cb663a4d6">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#a0af3e1ac0314a485171f1dda39929cb4">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
+<a id="a8dfbe8792e112e33623cf5bf44696376" name="a8dfbe8792e112e33623cf5bf44696376"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8dfbe8792e112e33623cf5bf44696376">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
 
 <div class="memitem">
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         <tr>
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           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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 <p>Gets the list of active species in the network defined by the file. </p>
 <dl class="section return"><dt>Returns</dt><dd>A const reference to the vector of active species. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">gridfire::engine::Engine</a>.</p>
 
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#a413b111f6a643d7aecbae01dd0f82640">&#9670;&#160;</a></span>getScreeningModel()</h2>
+<a id="a112fa152ca631af4dfd053e8689af7f5" name="a112fa152ca631af4dfd053e8689af7f5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a112fa152ca631af4dfd053e8689af7f5">&#9670;&#160;</a></span>getScreeningModel()</h2>
 
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           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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@@ -912,12 +949,12 @@ Private Attributes</h2></td></tr>
 <p>Gets the screening model from the base engine. </p>
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-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a24103027a38e02d4342161164554d332">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a60834e4bcfb2e4ec21a9cbf7bb9f7363">gridfire::engine::DynamicEngine</a>.</p>
 
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-<h2 class="memtitle"><span class="permalink"><a href="#ab051d976dbecf325747d54efe7834d04">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
+<a id="a992c39d65298e3b58e529825889b7eea" name="a992c39d65298e3b58e529825889b7eea"></a>
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           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
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-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aefc5d0f7842b27a108ba1e4ca346e9a0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a128dd0a7f738f93092c437eeda983fdf">gridfire::engine::DynamicEngine</a>.</p>
 
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-<h2 class="memtitle"><span class="permalink"><a href="#afb3c67ce20746b9acb2766920b8f397b">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
+<a id="a318de224195e7c953922c9f9ccfb8652" name="a318de224195e7c953922c9f9ccfb8652"></a>
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           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1007,12 +1053,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac0f40017603e8e6887b75dc7360d7c5e">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a16bd2fae51fa738da62f2a767f6875d2">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a65af092785759559f4697c7e66bef2e3" name="a65af092785759559f4697c7e66bef2e3"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a65af092785759559f4697c7e66bef2e3">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
+<a id="ab8b22ee7d51ce5cc762759946967852c" name="ab8b22ee7d51ce5cc762759946967852c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab8b22ee7d51ce5cc762759946967852c">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1023,8 +1069,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a> gridfire::engine::DefinedEngineView::getSpeciesStatus </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1043,12 +1093,12 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>The <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a> indicating if the species is active, inactive, or not present. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8aebefad50c1aa34207e118e92d7ccf0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a1fefd34491959f9936b7a065fc2d6274">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="a1edda1a27247480660cf7a63410f5799" name="a1edda1a27247480660cf7a63410f5799"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a1edda1a27247480660cf7a63410f5799">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
+<a id="ae1d570486213d9bfc018a2f1ac3d4a21" name="ae1d570486213d9bfc018a2f1ac3d4a21"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae1d570486213d9bfc018a2f1ac3d4a21">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1059,6 +1109,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::DefinedEngineView::getSpeciesTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1096,96 +1151,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aef6ed91d922c0b1733fd7835e99d0efe">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a92be21f072b61fcf291559246045801f">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a600dd38a6011089527024f1625130935" name="a600dd38a6011089527024f1625130935"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a600dd38a6011089527024f1625130935">&#9670;&#160;</a></span>getStoichiometryMatrixEntry()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">int gridfire::engine::DefinedEngineView::getStoichiometryMatrixEntry </td>
-          <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Gets an entry from the stoichiometry matrix for the active species and reactions. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">species</td><td>The species for which to get the stoichiometric coefficient. </td></tr>
-    <tr><td class="paramname">reaction</td><td>The reaction for which to get the stoichiometric coefficient. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>The stoichiometric coefficient for the given species and reaction.</dd></dl>
-<dl class="exception"><dt>Exceptions</dt><dd>
-  <table class="exception">
-    <tr><td class="paramname">std::runtime_error</td><td>If the view is stale. </td></tr>
-    <tr><td class="paramname">std::out_of_range</td><td>If an index is out of bounds. </td></tr>
-  </table>
-  </dd>
-</dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a6ef3052fce2d5e4fdaec6659df64c2bc" name="a6ef3052fce2d5e4fdaec6659df64c2bc"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6ef3052fce2d5e4fdaec6659df64c2bc">&#9670;&#160;</a></span>isStale()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">bool gridfire::engine::DefinedEngineView::isStale </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Checks if the engine view is stale. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The current network input (unused). </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>True if the view is stale and needs to be updated; false otherwise. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a79423b9f67b4cac702547b4f1d8bd14c">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a391bc4b5d946ea606cf7661955191d12" name="a391bc4b5d946ea606cf7661955191d12"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a391bc4b5d946ea606cf7661955191d12">&#9670;&#160;</a></span>mapFullToView()</h2>
+<a id="a47fc5027c1d787319f691751a0e043c7" name="a47fc5027c1d787319f691751a0e043c7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a47fc5027c1d787319f691751a0e043c7">&#9670;&#160;</a></span>mapFullToView()</h2>
 
 <div class="memitem">
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@@ -1196,13 +1167,17 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; double &gt; gridfire::engine::DefinedEngineView::mapFullToView </td>
           <td>(</td>
-          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>full</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>full</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel private">private</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel nodiscard">nodiscard</span><span class="mlabel private">private</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -1218,44 +1193,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="aa053696a7885b8e42562b2d22ee32d84" name="aa053696a7885b8e42562b2d22ee32d84"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa053696a7885b8e42562b2d22ee32d84">&#9670;&#160;</a></span>mapNetInToMolarAbundanceVector()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">std::vector&lt; double &gt; gridfire::engine::DefinedEngineView::mapNetInToMolarAbundanceVector </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Map from a <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> object to a vector of molar abundances for the active species. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> object containing the full network abundances. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>A vector of molar abundances for the active species. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa9d55b81c1963113aad86aa60c19676f">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="aa352f3ba0e689d3f81711c17f4f67dfc" name="aa352f3ba0e689d3f81711c17f4f67dfc"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa352f3ba0e689d3f81711c17f4f67dfc">&#9670;&#160;</a></span>mapViewToFull()</h2>
+<a id="a189092508a38a8f78b432d9470dd2e7f" name="a189092508a38a8f78b432d9470dd2e7f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a189092508a38a8f78b432d9470dd2e7f">&#9670;&#160;</a></span>mapViewToFull()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1266,8 +1205,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; double &gt; gridfire::engine::DefinedEngineView::mapViewToFull </td>
           <td>(</td>
-          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>defined</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>defined</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1288,8 +1231,8 @@ Private Attributes</h2></td></tr>
 
 </div>
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-<a id="afa9aeb6d11645e4b9cecf56fb63b51ef" name="afa9aeb6d11645e4b9cecf56fb63b51ef"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#afa9aeb6d11645e4b9cecf56fb63b51ef">&#9670;&#160;</a></span>mapViewToFullReactionIndex()</h2>
+<a id="af184e1166e3a0a74418af17226995c74" name="af184e1166e3a0a74418af17226995c74"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af184e1166e3a0a74418af17226995c74">&#9670;&#160;</a></span>mapViewToFullReactionIndex()</h2>
 
 <div class="memitem">
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@@ -1300,8 +1243,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">size_t gridfire::engine::DefinedEngineView::mapViewToFullReactionIndex </td>
           <td>(</td>
-          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>definedReactionIndex</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>definedReactionIndex</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1328,8 +1275,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="ad6986fa5cda1d9ed9d4f54f444f402e8" name="ad6986fa5cda1d9ed9d4f54f444f402e8"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad6986fa5cda1d9ed9d4f54f444f402e8">&#9670;&#160;</a></span>mapViewToFullSpeciesIndex()</h2>
+<a id="a9d28efabfafecf32b9f7e11164856132" name="a9d28efabfafecf32b9f7e11164856132"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9d28efabfafecf32b9f7e11164856132">&#9670;&#160;</a></span>mapViewToFullSpeciesIndex()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1340,8 +1287,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">size_t gridfire::engine::DefinedEngineView::mapViewToFullSpeciesIndex </td>
           <td>(</td>
-          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>definedSpeciesIndex</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>definedSpeciesIndex</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1368,8 +1319,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a2bc32a84c9f5372587fca92f2da77595" name="a2bc32a84c9f5372587fca92f2da77595"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2bc32a84c9f5372587fca92f2da77595">&#9670;&#160;</a></span>primeEngine()</h2>
+<a id="a25946bd58144c69152a7992dd2e093cc" name="a25946bd58144c69152a7992dd2e093cc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a25946bd58144c69152a7992dd2e093cc">&#9670;&#160;</a></span>primeEngine()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1380,8 +1331,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a> gridfire::engine::DefinedEngineView::primeEngine </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1400,12 +1355,12 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>The <a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" title="Captures the result of a network priming operation.">PrimingReport</a> from the base engine. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a70e270bb50910c0055a75575c1ef1e95">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30df09678c3de1a55b7c6ac5eae35004">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#ae89529e13f2b7fd2febcfa5af40d4666">&#9670;&#160;</a></span>setNetworkReactions()</h2>
+<a id="af52e0ce2ce80f08642c9a6dbf0adc929" name="af52e0ce2ce80f08642c9a6dbf0adc929"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af52e0ce2ce80f08642c9a6dbf0adc929">&#9670;&#160;</a></span>project()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1414,81 +1369,14 @@ Private Attributes</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">void gridfire::engine::DefinedEngineView::setNetworkReactions </td>
+          <td class="memname">fourdst::composition::Composition gridfire::engine::DefinedEngineView::project </td>
           <td>(</td>
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-          <td></td>
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-<p>Sets the active reactions in the network. </p>
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-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab321170954bffc53b1bedaf54f6976be">gridfire::engine::DynamicEngine</a>.</p>
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-<p>Sets the screening model for the base engine. </p>
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-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a50e76977d0dc3cc23d52b51842d35003">gridfire::engine::DynamicEngine</a>.</p>
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+          <td class="paramkey"></td>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
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@@ -1508,108 +1396,11 @@ Private Attributes</h2></td></tr>
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 <dl class="section post"><dt>Postcondition</dt><dd>If the view was stale, it is rebuilt and is no longer stale. </dd></dl>
 
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-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td> const</td>
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+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a260d36cc1e14ca8eda0309745e9134d9">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
 <h2 class="groupheader">Member Data Documentation</h2>
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-        </tr>
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-<p>Maps indices of active species to indices in the full network. </p>
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-        </tr>
-      </table>
-  </td>
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-<p>Cache for the active species vector to avoid dangling references. </p>
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-<p>Active reactions in the defined engine. </p>
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-          <td class="memname">quill::Logger* gridfire::engine::DefinedEngineView::m_logger = fourdst::logging::LogManager::getInstance().getLogger(&quot;log&quot;)</td>
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-<p>Active species in the defined engine. </p>
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-<p>Maps indices of active reactions to indices in the full network. </p>
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 </div>
 </div>
 <hr/>The documentation for this class was generated from the following files:<ul>
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+<text xml:space="preserve" text-anchor="start" x="876.75" y="-392.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="876.75" y="-381.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; JacobianMatrixState,</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-369.88" font-family="Helvetica,sans-Serif" font-size="10.00"> std::string &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-345.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_jacobianMatrixStateNameMap</text>
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+<text xml:space="preserve" text-anchor="start" x="732.88" y="-297.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="227.25" y="-348.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string&lt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-429.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_weakRateInterpolator</text>
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+<text xml:space="preserve" text-anchor="start" x="718.62" y="-442.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="718.62" y="-431.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; uint32_t, gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-419.88" font-family="Helvetica,sans-Serif" font-size="10.00">::rates::weak::IsotopeGrid &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="266.25" y="-557.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="266.25" y="-450.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="189.75" y="-412.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-249.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
+<text xml:space="preserve" text-anchor="start" x="728" y="-238.12" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::reaction</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-226.88" font-family="Helvetica,sans-Serif" font-size="10.00">::Reaction &gt; &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.25" y="-451.25" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1035.25" y="-440" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
-<text xml:space="preserve" text-anchor="start" x="1035.25" y="-428.75" font-family="Helvetica,sans-Serif" font-size="10.00"> gridfire::reaction::</text>
-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-417.5" font-family="Helvetica,sans-Serif" font-size="10.00">Reaction * &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-236" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-224.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-213.5" font-family="Helvetica,sans-Serif" font-size="10.00"> gridfire::reaction::</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-202.25" font-family="Helvetica,sans-Serif" font-size="10.00">Reaction * &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="632.62" y="-150.23" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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+<title>Node19&#45;&gt;Node35</title>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-60" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reaction</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-1.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reaction</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-723.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-293.55" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
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-<text xml:space="preserve" text-anchor="start" x="739.25" y="-737" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-725.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="739.25" y="-189.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-178.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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@@ -546,28 +536,28 @@ var sectionId = 'dynsection-1';
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-241.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-453.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-258.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-365.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-331.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-320.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-309.12" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-116.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-105.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-93.88" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-87.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="448.38" y="-371" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-359.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="448.38" y="-95.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-84.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.62" y="-380" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-368.75" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-164.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-153.5" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-201.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-142.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-56.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-85.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-744.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-733.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, fourdst::atomic</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-731.7" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_indexToSpeciesMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1013.88" y="-635.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-631.69" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_partitionFunction</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-684.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
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+<text xml:space="preserve" text-anchor="start" x="1012" y="-527.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="middle" x="266.25" y="-401.5" font-family="Helvetica,sans-Serif" font-size="10.00">::rates::weak::WeakRatePayload &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-310.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactions</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-249.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
+<text xml:space="preserve" text-anchor="start" x="728" y="-238.12" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::reaction</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-226.88" font-family="Helvetica,sans-Serif" font-size="10.00">::Reaction &gt; &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="445.75" y="-203.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-105.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-56.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-635.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> ptr</text>
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-<text xml:space="preserve" text-anchor="start" x="2091.5" y="-426.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
-<text xml:space="preserve" text-anchor="start" x="2091.5" y="-415.38" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::engine</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-684.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-673.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, size_t &gt; &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1813.62" y="-445.57" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_atomicReverseRates</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-687.02" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_full_sparsity_set</text>
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-<text xml:space="preserve" text-anchor="start" x="1894" y="-360.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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-<text xml:space="preserve" text-anchor="middle" x="1945.38" y="-338.12" font-family="Helvetica,sans-Serif" font-size="10.00">AtomicReverseRate &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="743" y="-684.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::pair&lt; size_t,</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-673.5" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-684.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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+<text xml:space="preserve" text-anchor="start" x="2044.25" y="-411.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
+<text xml:space="preserve" text-anchor="start" x="2044.25" y="-400.12" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::engine</text>
+<text xml:space="preserve" text-anchor="middle" x="2131.62" y="-388.88" font-family="Helvetica,sans-Serif" font-size="10.00">::GraphEngine::AtomicReverseRate &gt; &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1813.62" y="-281.72" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> ptr</text>
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+<!-- Node33&#45;&gt;Node5 -->
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+<title>Node33&#45;&gt;Node5</title>
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+<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M2024.29,-407.39C1868.22,-412.37 1581.36,-421.53 1448.92,-425.75"/>
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+<text xml:space="preserve" text-anchor="middle" x="1766.38" y="-418.86" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_atomicReverseRates</text>
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-<text xml:space="preserve" text-anchor="start" x="1367.38" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">CppAD::atomic_base</text>
-<text xml:space="preserve" text-anchor="middle" x="1414.25" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1846.75" y="-385.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="start" x="1846.75" y="-374.12" font-family="Helvetica,sans-Serif" font-size="10.00">::engine::GraphEngine::</text>
+<text xml:space="preserve" text-anchor="middle" x="1898.12" y="-362.88" font-family="Helvetica,sans-Serif" font-size="10.00">AtomicReverseRate &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1996.88" y="-392.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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+<title>Node35&#45;&gt;Node34</title>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-127.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_screeningModel</text>
+<text xml:space="preserve" text-anchor="middle" x="1766.38" y="-377.68" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> ptr</text>
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+<text xml:space="preserve" text-anchor="start" x="1330.62" y="-370.75" font-family="Helvetica,sans-Serif" font-size="10.00">CppAD::atomic_base</text>
+<text xml:space="preserve" text-anchor="middle" x="1377.5" y="-359.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; double &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-805.12" font-family="Helvetica,sans-Serif" font-size="10.00">::PrecomputedReaction &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1012" y="-527.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-516.5" font-family="Helvetica,sans-Serif" font-size="10.00">::screening::ScreeningModel &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-519.42" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_screeningModel</text>
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+<text xml:space="preserve" text-anchor="start" x="741.12" y="-527.75" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::screening</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-516.5" font-family="Helvetica,sans-Serif" font-size="10.00">::ScreeningModel</text>
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+<text xml:space="preserve" text-anchor="start" x="1022.5" y="-587.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; gridfire</text>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_dynamic_engine-members.html b/docs/html/classgridfire_1_1engine_1_1_dynamic_engine-members.html
index ce37604a..de9ee104 100644
--- a/docs/html/classgridfire_1_1engine_1_1_dynamic_engine-members.html
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@@ -29,7 +29,7 @@
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">getNetworkSpecies</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a24103027a38e02d4342161164554d332">getScreeningModel</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aefc5d0f7842b27a108ba1e4ca346e9a0">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac0f40017603e8e6887b75dc7360d7c5e">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8aebefad50c1aa34207e118e92d7ccf0">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aef6ed91d922c0b1733fd7835e99d0efe">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a79423b9f67b4cac702547b4f1d8bd14c">isStale</a>(const NetIn &amp;netIn)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa9d55b81c1963113aad86aa60c19676f">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a70e270bb50910c0055a75575c1ef1e95">primeEngine</a>(const NetIn &amp;netIn)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab321170954bffc53b1bedaf54f6976be">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a50e76977d0dc3cc23d52b51842d35003">setScreeningModel</a>(screening::ScreeningType model)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8dd85442ec54f20d91743c72364e36ff">update</a>(const NetIn &amp;netIn)=0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a3fd5d4f3c58d1790b7a517b5ef888eaf">calculateEpsDerivatives</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#abf0f13b9eae66da6119e6fca826379e8">calculateMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">collectComposition</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90">constructStateBlob</a>(const scratch::StateBlob *blob) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab6d95491f017feb4c43d9fa05739fcd0">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a983551b5fef4610799c062cb5be2b1c7">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a78f7b315bfa0a1f34d8fd5ab652b6934">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30cc7809d53540bd3407d971de8eec48">getMostRecentRHSCalculation</a>(scratch::StateBlob &amp;ctx) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a77a889cbc3791beca4abb95cb663a4d6">getNetworkReactions</a>(scratch::StateBlob &amp;ctx) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a60834e4bcfb2e4ec21a9cbf7bb9f7363">getScreeningModel</a>(scratch::StateBlob &amp;ctx) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a128dd0a7f738f93092c437eeda983fdf">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a16bd2fae51fa738da62f2a767f6875d2">getSpeciesIndex</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a1fefd34491959f9936b7a065fc2d6274">getSpeciesStatus</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a92be21f072b61fcf291559246045801f">getSpeciesTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30df09678c3de1a55b7c6ac5eae35004">primeEngine</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a260d36cc1e14ca8eda0309745e9134d9">project</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
diff --git a/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.html b/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.html
index 6e5cd773..d99c5985 100644
--- a/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.html
+++ b/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -123,82 +123,67 @@ Collaboration diagram for gridfire::engine::DynamicEngine:</div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
 Public Member Functions</h2></td></tr>
-<tr class="memitem:a53276f09346b531f8676db355e1219eb" id="r_a53276f09346b531f8676db355e1219eb"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a53276f09346b531f8676db355e1219eb">generateJacobianMatrix</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td></tr>
-<tr class="memdesc:a53276f09346b531f8676db355e1219eb"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generate the Jacobian matrix for the current state.  <br /></td></tr>
-<tr class="separator:a53276f09346b531f8676db355e1219eb"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a15d53dac8b622a3b7d0f928a3995dbde" id="r_a15d53dac8b622a3b7d0f928a3995dbde"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a15d53dac8b622a3b7d0f928a3995dbde">generateJacobianMatrix</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const =0</td></tr>
-<tr class="memdesc:a15d53dac8b622a3b7d0f928a3995dbde"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generate the Jacobian matrix for the current state using a subset of active species.  <br /></td></tr>
-<tr class="separator:a15d53dac8b622a3b7d0f928a3995dbde"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a51d55a21be28e372021b2b8e5ecdc551" id="r_a51d55a21be28e372021b2b8e5ecdc551"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a51d55a21be28e372021b2b8e5ecdc551">generateJacobianMatrix</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const <a class="el" href="namespacegridfire_1_1engine.html#a9de1791ec719c0a9b76b835703336870">SparsityPattern</a> &amp;sparsityPattern) const =0</td></tr>
-<tr class="memdesc:a51d55a21be28e372021b2b8e5ecdc551"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generate the Jacobian matrix for the current state with a specified sparsity pattern.  <br /></td></tr>
-<tr class="separator:a51d55a21be28e372021b2b8e5ecdc551"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a5e2c45a3e415b53e41def8f743f93464" id="r_a5e2c45a3e415b53e41def8f743f93464"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5e2c45a3e415b53e41def8f743f93464">generateStoichiometryMatrix</a> ()=0</td></tr>
-<tr class="memdesc:a5e2c45a3e415b53e41def8f743f93464"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generate the stoichiometry matrix for the network.  <br /></td></tr>
-<tr class="separator:a5e2c45a3e415b53e41def8f743f93464"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a5ce6ff370e3f0964c6b2688fb3f4bb7e" id="r_a5ce6ff370e3f0964c6b2688fb3f4bb7e"><td class="memItemLeft" align="right" valign="top">virtual int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5ce6ff370e3f0964c6b2688fb3f4bb7e">getStoichiometryMatrixEntry</a> (const fourdst::atomic::Species &amp;species, const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;reaction) const =0</td></tr>
-<tr class="memdesc:a5ce6ff370e3f0964c6b2688fb3f4bb7e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get an entry from the stoichiometry matrix.  <br /></td></tr>
-<tr class="separator:a5ce6ff370e3f0964c6b2688fb3f4bb7e"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:aa57fa5e58b98a03fba31bcddda8001d4" id="r_aa57fa5e58b98a03fba31bcddda8001d4"><td class="memItemLeft" align="right" valign="top">virtual double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa57fa5e58b98a03fba31bcddda8001d4">calculateMolarReactionFlow</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td></tr>
-<tr class="memdesc:aa57fa5e58b98a03fba31bcddda8001d4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the molar reaction flow for a given reaction.  <br /></td></tr>
-<tr class="separator:aa57fa5e58b98a03fba31bcddda8001d4"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ada6a1295a92c2aede841672ecae0cede" id="r_ada6a1295a92c2aede841672ecae0cede"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">EnergyDerivatives</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ada6a1295a92c2aede841672ecae0cede">calculateEpsDerivatives</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td></tr>
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+<tr class="memdesc:a128dd0a7f738f93092c437eeda983fdf"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compute destruction timescales for all species in the network.  <br /></td></tr>
+<tr class="separator:a128dd0a7f738f93092c437eeda983fdf"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a260d36cc1e14ca8eda0309745e9134d9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update the thread local scratch pad state of a network.  <br /></td></tr>
+<tr class="separator:a260d36cc1e14ca8eda0309745e9134d9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a60834e4bcfb2e4ec21a9cbf7bb9f7363" id="r_a60834e4bcfb2e4ec21a9cbf7bb9f7363"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a60834e4bcfb2e4ec21a9cbf7bb9f7363">getScreeningModel</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx) const =0</td></tr>
+<tr class="memdesc:a60834e4bcfb2e4ec21a9cbf7bb9f7363"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the current electron screening model.  <br /></td></tr>
+<tr class="separator:a60834e4bcfb2e4ec21a9cbf7bb9f7363"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a16bd2fae51fa738da62f2a767f6875d2" id="r_a16bd2fae51fa738da62f2a767f6875d2"><td class="memItemLeft" align="right" valign="top">virtual size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a16bd2fae51fa738da62f2a767f6875d2">getSpeciesIndex</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const fourdst::atomic::Species &amp;species) const =0</td></tr>
+<tr class="memdesc:a16bd2fae51fa738da62f2a767f6875d2"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the index of a species in the network.  <br /></td></tr>
+<tr class="separator:a16bd2fae51fa738da62f2a767f6875d2"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a30df09678c3de1a55b7c6ac5eae35004" id="r_a30df09678c3de1a55b7c6ac5eae35004"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a30df09678c3de1a55b7c6ac5eae35004">primeEngine</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;netIn) const =0</td></tr>
+<tr class="memdesc:a30df09678c3de1a55b7c6ac5eae35004"><td class="mdescLeft">&#160;</td><td class="mdescRight">Prime the engine with initial conditions.  <br /></td></tr>
+<tr class="separator:a30df09678c3de1a55b7c6ac5eae35004"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a078a16d21f2d7de9636c5bc6a05ddfec" id="r_a078a16d21f2d7de9636c5bc6a05ddfec"><td class="memItemLeft" align="right" valign="top">virtual fourdst::composition::Composition&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a078a16d21f2d7de9636c5bc6a05ddfec">collectComposition</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td></tr>
+<tr class="memdesc:a078a16d21f2d7de9636c5bc6a05ddfec"><td class="mdescLeft">&#160;</td><td class="mdescRight">Recursively collect composition from current engine and any sub engines if they exist.  <br /></td></tr>
+<tr class="separator:a078a16d21f2d7de9636c5bc6a05ddfec"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a1fefd34491959f9936b7a065fc2d6274" id="r_a1fefd34491959f9936b7a065fc2d6274"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1fefd34491959f9936b7a065fc2d6274">getSpeciesStatus</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const fourdst::atomic::Species &amp;species) const =0</td></tr>
+<tr class="memdesc:a1fefd34491959f9936b7a065fc2d6274"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the status of a species in the network.  <br /></td></tr>
+<tr class="separator:a1fefd34491959f9936b7a065fc2d6274"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a30cc7809d53540bd3407d971de8eec48" id="r_a30cc7809d53540bd3407d971de8eec48"><td class="memItemLeft" align="right" valign="top">virtual std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a30cc7809d53540bd3407d971de8eec48">getMostRecentRHSCalculation</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx) const =0</td></tr>
+<tr class="separator:a30cc7809d53540bd3407d971de8eec48"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a675024091dc64f8784204a78bab46d90" id="r_a675024091dc64f8784204a78bab46d90"><td class="memItemLeft" align="right" valign="top">virtual std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a675024091dc64f8784204a78bab46d90">constructStateBlob</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> *blob) const =0</td></tr>
+<tr class="separator:a675024091dc64f8784204a78bab46d90"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="inherit_header pub_methods_classgridfire_1_1engine_1_1_engine"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1engine_1_1_engine')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td></tr>
 <tr class="memitem:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_af0ea99416c28933d364a872fc6aff556"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a> ()=default</td></tr>
 <tr class="memdesc:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
 <tr class="separator:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a3263c3fde2509d5d8ec4da3b6e946c48 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_a3263c3fde2509d5d8ec4da3b6e946c48"><td class="memItemLeft" align="right" valign="top">virtual const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">getNetworkSpecies</a> () const =0</td></tr>
-<tr class="memdesc:a3263c3fde2509d5d8ec4da3b6e946c48 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the list of species in the network.  <br /></td></tr>
-<tr class="separator:a3263c3fde2509d5d8ec4da3b6e946c48 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a764fc091c72c12c8529105d7c96badb2 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_a764fc091c72c12c8529105d7c96badb2"><td class="memItemLeft" align="right" valign="top">virtual std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">calculateRHSAndEnergy</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td></tr>
-<tr class="memdesc:a764fc091c72c12c8529105d7c96badb2 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the right-hand side (dY/dt) and energy generation.  <br /></td></tr>
-<tr class="separator:a764fc091c72c12c8529105d7c96badb2 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afa8b1970e20f4bab61e4d31ead09f930 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_afa8b1970e20f4bab61e4d31ead09f930"><td class="memItemLeft" align="right" valign="top">virtual const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">getNetworkSpecies</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx) const =0</td></tr>
+<tr class="memdesc:afa8b1970e20f4bab61e4d31ead09f930 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the list of species in the network.  <br /></td></tr>
+<tr class="separator:afa8b1970e20f4bab61e4d31ead09f930 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a71c9ed5e0810799cd6af1d8ffbc8a918 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_a71c9ed5e0810799cd6af1d8ffbc8a918"><td class="memItemLeft" align="right" valign="top">virtual std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">calculateRHSAndEnergy</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const =0</td></tr>
+<tr class="memdesc:a71c9ed5e0810799cd6af1d8ffbc8a918 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the right-hand side (dY/dt) and energy generation.  <br /></td></tr>
+<tr class="separator:a71c9ed5e0810799cd6af1d8ffbc8a918 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Abstract class for engines supporting Jacobian and stoichiometry operations. </p>
@@ -211,8 +196,8 @@ Public Member Functions</h2></td></tr>
 </ul>
 <p>Intended usage: Derive from this class to implement engines that support advanced solver features such as implicit integration, sensitivity analysis, QSE (Quasi-Steady-State Equilibrium) handling, and more. Generally this will be the main engine type </p>
 </div><h2 class="groupheader">Member Function Documentation</h2>
-<a id="ada6a1295a92c2aede841672ecae0cede" name="ada6a1295a92c2aede841672ecae0cede"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ada6a1295a92c2aede841672ecae0cede">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
+<a id="a3fd5d4f3c58d1790b7a517b5ef888eaf" name="a3fd5d4f3c58d1790b7a517b5ef888eaf"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3fd5d4f3c58d1790b7a517b5ef888eaf">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -223,6 +208,11 @@ Public Member Functions</h2></td></tr>
         <tr>
           <td class="memname">virtual <a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">EnergyDerivatives</a> gridfire::engine::DynamicEngine::calculateEpsDerivatives </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -255,12 +245,12 @@ Public Member Functions</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html" title="Structure holding derivatives of energy generation rate with respect to T and rho.">EnergyDerivatives</a> containing dEps/dT and dEps/dRho.</dd></dl>
 <p>This method computes the partial derivatives of the specific nuclear energy generation rate with respect to temperature and density for the current state. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a17bbc9c0d480a8533acb193cb9a46fea">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2a866a7ba9572d36efab8efe72a063f5">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac7e4624ed6eee72e7a8df42381d098bb">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ac720fcea2f0304c3d7e7ba8a6dfb84da">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a6832a7898da51017a20f578e33cba729">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8c12a3dd77c7f277a982b2e826de1b95">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6e0458acf7855ff6472b96801048479">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aa265b90b5ec153e1e71acb2d0e8fad36">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a1e6fe11b37d5ef6da00ec36d06ebc957">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a01c0ea8802358c2cbc6d8571a145775a">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="aa57fa5e58b98a03fba31bcddda8001d4" name="aa57fa5e58b98a03fba31bcddda8001d4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa57fa5e58b98a03fba31bcddda8001d4">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
+<a id="abf0f13b9eae66da6119e6fca826379e8" name="abf0f13b9eae66da6119e6fca826379e8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abf0f13b9eae66da6119e6fca826379e8">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
 
 <div class="memitem">
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@@ -271,6 +261,11 @@ Public Member Functions</h2></td></tr>
         <tr>
           <td class="memname">virtual double gridfire::engine::DynamicEngine::calculateMolarReactionFlow </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
         </tr>
         <tr>
@@ -299,6 +294,7 @@ Public Member Functions</h2></td></tr>
 <p>Calculate the molar reaction flow for a given reaction. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">reaction</td><td>The reaction for which to calculate the flow. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -309,12 +305,12 @@ Public Member Functions</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>Molar flow rate for the reaction (e.g., mol/g/s).</dd></dl>
 <p>This method computes the net rate at which the given reaction proceeds under the current state. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5bd0174105e836dd98c71ab495357e5b">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2f0ad1febc467bce87b5c6ad29b059fb">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aaff9cdc04ca01e7c927d36476bcf5da4">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af030c9bd6a95686a09429b4619ad188c">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a8facba88b6df6e016ce53a0ff3cff125">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aededeeeec7833c8f40b0aa27ff165833">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb78ba1245f5b61a29d6163c4548f6b6">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a154eda68e5df7f45b0e59b17761177b3">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0ef7edd271cec2b1b0e74b828ee25dba">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a2f723f732e9a83c24c1e654885ec7eea">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a41877719ae5e8de53c1692c7cf9bfbfc" name="a41877719ae5e8de53c1692c7cf9bfbfc"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a41877719ae5e8de53c1692c7cf9bfbfc">&#9670;&#160;</a></span>collectComposition()</h2>
+<a id="a078a16d21f2d7de9636c5bc6a05ddfec" name="a078a16d21f2d7de9636c5bc6a05ddfec"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a078a16d21f2d7de9636c5bc6a05ddfec">&#9670;&#160;</a></span>collectComposition()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -325,6 +321,11 @@ Public Member Functions</h2></td></tr>
         <tr>
           <td class="memname">virtual fourdst::composition::Composition gridfire::engine::DynamicEngine::collectComposition </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -340,7 +341,7 @@ Public Member Functions</h2></td></tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -351,6 +352,7 @@ Public Member Functions</h2></td></tr>
 These methods return an unfinalized composition which must then be finalized by the caller </dd></dl>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Input composition to "normalize". </td></tr>
     <tr><td class="paramname">T9</td><td></td></tr>
     <tr><td class="paramname">rho</td><td></td></tr>
@@ -359,12 +361,39 @@ These methods return an unfinalized composition which must then be finalized by
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>An updated composition which is a superset of comp. This may contain species which were culled, for example, by either QSE partitioning or reaction flow rate culling </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a77d4c08eecfad5cc414161d0fc8db946">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25dc44af1a58561b665103b16abe9bbc">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ae9d4d99c791876c012697fe5a0ba06c8">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a97d9616558f681ad010ee452394f3519">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a239826d90cb5db236e68230f7ac84bcb">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a7d4d16693db712b1823377ad460f5144">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4002e188995b6c203dc391f381432e5b">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a1c977a772eedae1cceeb6b50d984fde4">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5c7669454b986ed20db8387e5724b2b0">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a60445db14a6bfd0eeef7c0a62d458a60">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a53276f09346b531f8676db355e1219eb" name="a53276f09346b531f8676db355e1219eb"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a53276f09346b531f8676db355e1219eb">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
+<a id="a675024091dc64f8784204a78bab46d90" name="a675024091dc64f8784204a78bab46d90"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a675024091dc64f8784204a78bab46d90">&#9670;&#160;</a></span>constructStateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &gt; gridfire::engine::DynamicEngine::constructStateBlob </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> *</td>          <td class="paramname"><span class="paramname"><em>blob</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a2e5d6985c84cc9c404080f8add5f5c18">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ac126bed6dcdfa6b2888efa3a769b4490">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acfe338ed3b10a4f116e58b2693a7fe10">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a80dc129ae2fc3dd2f1d82e123e7cda3f">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a6dc693583383d7237b3cede639b41f5f">PyDynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="ab6d95491f017feb4c43d9fa05739fcd0" name="ab6d95491f017feb4c43d9fa05739fcd0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab6d95491f017feb4c43d9fa05739fcd0">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -375,6 +404,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::DynamicEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -398,6 +432,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Generate the Jacobian matrix for the current state. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3.</td></tr>
@@ -406,12 +441,12 @@ These methods return an unfinalized composition which must then be finalized by
 </dl>
 <p>This method must compute and store the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state. The matrix can then be accessed via getJacobianMatrixEntry(). </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a2a44dfae512b370bad6b977330e0636a">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4d90439d99da61107d95319b970760bc">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a9ca013f203d7a3ef9d1b9ee4b2982cb0">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8950fb9c0c36684538805de4f0acf82e">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a298f700c647d2c3973d2a35d370c823e">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8d2ad2c011dede7b9abc508e0eead302">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa7d5c9288cfe23aa4435a89210280d83">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab7efbe72c39d2828eeed4e20f319a2c8">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#adb4206971c774362ca4a92acae64c0a8">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a13b42a3a523e4c14e06820a43f15041b">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a51d55a21be28e372021b2b8e5ecdc551" name="a51d55a21be28e372021b2b8e5ecdc551"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a51d55a21be28e372021b2b8e5ecdc551">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
+<a id="a78f7b315bfa0a1f34d8fd5ab652b6934" name="a78f7b315bfa0a1f34d8fd5ab652b6934"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a78f7b315bfa0a1f34d8fd5ab652b6934">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -422,6 +457,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::DynamicEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -450,6 +490,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Generate the Jacobian matrix for the current state with a specified sparsity pattern. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>Get the scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -460,12 +501,12 @@ These methods return an unfinalized composition which must then be finalized by
 <p>This method must compute and store the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state using automatic differentiation, taking into account the provided sparsity pattern. The matrix can then be accessed via <code>getJacobianMatrixEntry()</code>.</p>
 <dl class="section see"><dt>See also</dt><dd>getJacobianMatrixEntry() </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ae894f46c67a8b8e02b8988a6b73dc9e5">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1de5867a0e633de0d0d96ac4fbb141e5">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac4f9cd4e2304f681dd9af0f7b751cb81">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a64b6e7e5794cc42edf72899d348d15af">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a204643754cac3cf37c550ecd32f659fe">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a7ece1ddb7b891695b70566e29ed5ab8f">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a37ba76a5a0d0cb46d93df1982f196f11">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a7704e02c04de922ae6b01f4ba2b88148">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad515fb9edfe551329ded487d43257745">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#af9c4725bfc2cc8c85c63790e2385d55b">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a15d53dac8b622a3b7d0f928a3995dbde" name="a15d53dac8b622a3b7d0f928a3995dbde"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a15d53dac8b622a3b7d0f928a3995dbde">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
+<a id="a983551b5fef4610799c062cb5be2b1c7" name="a983551b5fef4610799c062cb5be2b1c7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a983551b5fef4610799c062cb5be2b1c7">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -476,6 +517,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::DynamicEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -504,6 +550,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Generate the Jacobian matrix for the current state using a subset of active species. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -513,12 +560,12 @@ These methods return an unfinalized composition which must then be finalized by
 </dl>
 <p>This method must compute and store the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state, considering only the specified subset of active species. The matrix can then be accessed via getJacobianMatrixEntry(). </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a1b7b3b0b449d0859d57f99188cdd83d6">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4966f8cbc859ce2a8a465516d0c0abd0">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acc28ff627d46d8d4066a1acf830cbe27">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aae6c00cff4f7a992513d1e9481436f8f">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a2b1c054b250abccc2af9a7275c68df4a">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6c279469be6f58b4213ea9f9cf9d07cc">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1457e3aa9caae5d2fba17adc62f47c79">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a72130974401a22155dfd9a2e68192d56">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae8be625f7535f2957a5de7b525020388">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a5a2697b43cddeef2aeb40b604a0de933">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a5e2c45a3e415b53e41def8f743f93464" name="a5e2c45a3e415b53e41def8f743f93464"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a5e2c45a3e415b53e41def8f743f93464">&#9670;&#160;</a></span>generateStoichiometryMatrix()</h2>
+<a id="ac87099ff654ca30a8d8224f4779e1a15" name="ac87099ff654ca30a8d8224f4779e1a15"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac87099ff654ca30a8d8224f4779e1a15">&#9670;&#160;</a></span>getInactiveNetworkReactions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -527,39 +574,9 @@ These methods return an unfinalized composition which must then be finalized by
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">virtual void gridfire::engine::DynamicEngine::generateStoichiometryMatrix </td>
+          <td class="memname">virtual <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> gridfire::engine::DynamicEngine::getInactiveNetworkReactions </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Generate the stoichiometry matrix for the network. </p>
-<p>This method must compute and store the stoichiometry matrix, which encodes the net change of each species in each reaction. </p>
-
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a754445722193f11ae534b7c0afa9b8aa">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af4049e5570bd143d41cab1d4005b6824">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2221feee40542efa1c07f01225bd3828">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a552fa7e1f4e066fa577c55500e782014">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a2066649ca11a869c054079ea12d8d0e9">PyDynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="ac5a0def6b6af0bd93bf9057c25f048ff" name="ac5a0def6b6af0bd93bf9057c25f048ff"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac5a0def6b6af0bd93bf9057c25f048ff">&#9670;&#160;</a></span>getDepth()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">virtual <a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">BuildDepthType</a> gridfire::engine::DynamicEngine::getDepth </td>
-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -570,16 +587,89 @@ These methods return an unfinalized composition which must then be finalized by
 </table>
 </div><div class="memdoc">
 
-<p>Get the depth of the network. </p>
-<dl class="section return"><dt>Returns</dt><dd>The depth of the network, which may indicate the level of detail or complexity in the reaction network.</dd></dl>
-<p>This method is intended to provide information about the network's structure, such as how many layers of reactions or species are present. It can be useful for diagnostics and understanding the network's complexity. </p>
+<p>Get the set of inactive reactions in the network. </p>
+<dl class="section return"><dt>Returns</dt><dd><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">ReactionSet</a> containing all inactive reactions.</dd></dl>
+<p>By default, this method returns an empty set. Derived classes can override this method to provide the actual set of inactive reactions based on their internal logic (e.g., reaction flow culling, QSE partitioning). </p>
 
-<p>Reimplemented in <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab29d6c4a7c789cf3d75767833c80c658">gridfire::engine::GraphEngine</a>, and <a class="el" href="class_py_dynamic_engine.html#a541cf022fe3253279f8f1309c10556d7">PyDynamicEngine</a>.</p>
+<p>Reimplemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a03857da090f2efb6d725bdd176f3e37e">gridfire::engine::AdaptiveEngineView</a>.</p>
 
 </div>
 </div>
-<a id="a26b59a4c7622bf820c0eeec6a7522aa8" name="a26b59a4c7622bf820c0eeec6a7522aa8"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a26b59a4c7622bf820c0eeec6a7522aa8">&#9670;&#160;</a></span>getNetworkReactions()</h2>
+<a id="adc0a33fa6e9d8de3b433fef55f3a6972" name="adc0a33fa6e9d8de3b433fef55f3a6972"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adc0a33fa6e9d8de3b433fef55f3a6972">&#9670;&#160;</a></span>getInactiveReactionMolarReactionFlow()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual double gridfire::engine::DynamicEngine::getInactiveReactionMolarReactionFlow </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Reimplemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a4a9d62261b218d85a4a59d3402104d9b">gridfire::engine::AdaptiveEngineView</a>.</p>
+
+</div>
+</div>
+<a id="a30cc7809d53540bd3407d971de8eec48" name="a30cc7809d53540bd3407d971de8eec48"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a30cc7809d53540bd3407d971de8eec48">&#9670;&#160;</a></span>getMostRecentRHSCalculation()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt; gridfire::engine::DynamicEngine::getMostRecentRHSCalculation </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#abbb82ee0db6a3c033019004ef48b1bff">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8d2685b85a46c3979ca23db7eaa618b5">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0e484a5fcabc2ced4552e92078fcc03d">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9eeedbcf35b6cb0341a51ba1dddc97fe">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a6db6bfd45e74517f837c1b83a9919924">PyDynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="a77a889cbc3791beca4abb95cb663a4d6" name="a77a889cbc3791beca4abb95cb663a4d6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a77a889cbc3791beca4abb95cb663a4d6">&#9670;&#160;</a></span>getNetworkReactions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -590,7 +680,7 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp; gridfire::engine::DynamicEngine::getNetworkReactions </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -604,12 +694,12 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Get the set of logical reactions in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>Reference to the LogicalReactionSet containing all reactions. </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a722ea6e07d46f739c29ad681c7500f8c">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a81732c1b2d08451849c1ddf833246892">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a749cc482a707cb3a38bdd5de894716e2">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9dc9de4359beb704b94024f159ae619d">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a1d5143640666631501cf229bc491516e">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a14363a95a15d66893d3bec0c3f69b34f">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#acec78c23ab9a29c6fe930cb54388e6eb">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a90e87465ba1e80af7124c0e4614d433b">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ac2141220d0d504bb9c1cb31ce03d957e">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a78d0b8501591667f8593a929a5439692">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a24103027a38e02d4342161164554d332" name="a24103027a38e02d4342161164554d332"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a24103027a38e02d4342161164554d332">&#9670;&#160;</a></span>getScreeningModel()</h2>
+<a id="a60834e4bcfb2e4ec21a9cbf7bb9f7363" name="a60834e4bcfb2e4ec21a9cbf7bb9f7363"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a60834e4bcfb2e4ec21a9cbf7bb9f7363">&#9670;&#160;</a></span>getScreeningModel()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -620,7 +710,7 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual <a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a> gridfire::engine::DynamicEngine::getScreeningModel </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -632,17 +722,23 @@ These methods return an unfinalized composition which must then be finalized by
 </div><div class="memdoc">
 
 <p>Get the current electron screening model. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state.</td></tr>
+  </table>
+  </dd>
+</dl>
 <dl class="section return"><dt>Returns</dt><dd>The currently active screening model type.</dd></dl>
 <dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line"><a class="code hl_enumeration" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a> currentModel = myEngine.getScreeningModel();</div>
 <div class="ttc" id="anamespacegridfire_1_1screening_html_aa82aafbc4f8c28d0a75b60798e3a7d25"><div class="ttname"><a href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">gridfire::screening::ScreeningType</a></div><div class="ttdeci">ScreeningType</div><div class="ttdoc">Enumerates the available plasma screening models.</div><div class="ttdef"><b>Definition</b> screening_types.h:15</div></div>
 </div><!-- fragment --> </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#acbd5b36262fa7d40f3274f4be6f0b8f6">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a413b111f6a643d7aecbae01dd0f82640">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a62c6f3bebe931bcd412fb492deb634a5">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#accdd09720d44cc5efb1ee267706f0500">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#ab4cfdca5e15957c5cef75ffa6dedeee5">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a58d208da3143807baac98484aa260bd2">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a112fa152ca631af4dfd053e8689af7f5">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a69b478b15844d145219c9c5a4e515e59">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afab9ea03b2f6b97e9c40249ab8834107">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#ae36830f13ee730dccc3a5a8b3e4d603c">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="aefc5d0f7842b27a108ba1e4ca346e9a0" name="aefc5d0f7842b27a108ba1e4ca346e9a0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aefc5d0f7842b27a108ba1e4ca346e9a0">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
+<a id="a128dd0a7f738f93092c437eeda983fdf" name="a128dd0a7f738f93092c437eeda983fdf"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a128dd0a7f738f93092c437eeda983fdf">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -653,6 +749,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::DynamicEngine::getSpeciesDestructionTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -676,6 +777,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Compute destruction timescales for all species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -685,12 +787,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd>Map from Species to their destruction timescales (s).</dd></dl>
 <p>This method estimates the destruction timescale for each species, which can be useful for understanding reaction flows and equilibrium states. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a420666d17650736e20402514294f9a14">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab051d976dbecf325747d54efe7834d04">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ae026bc87dc8b24fd78d412ac7e58b148">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a27d68f2e6c4572445cd94dc472470a01">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a8d34faa3d6ea804a3467979858d33535">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6fdf4ba999ca4ee089297380f3af9249">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a992c39d65298e3b58e529825889b7eea">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a32ab9175e93ae29f87b0903400cb3521">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8e50f727ca6b42c27b9d5786e078ff6a">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#af5f39c10cfc932d006c08e4bd1c1bcad">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="ac0f40017603e8e6887b75dc7360d7c5e" name="ac0f40017603e8e6887b75dc7360d7c5e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac0f40017603e8e6887b75dc7360d7c5e">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
+<a id="a16bd2fae51fa738da62f2a767f6875d2" name="a16bd2fae51fa738da62f2a767f6875d2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a16bd2fae51fa738da62f2a767f6875d2">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -701,8 +803,12 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual size_t gridfire::engine::DynamicEngine::getSpeciesIndex </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -715,18 +821,19 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Get the index of a species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">species</td><td>The species to look up.</td></tr>
   </table>
   </dd>
 </dl>
 <p>This method allows querying the index of a specific species in the engine's internal representation. It is useful for accessing species data efficiently. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ad7a82578006e5c55ca7716e7ab7e710c">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb3c67ce20746b9acb2766920b8f397b">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad67b0022cc783e63ae1954a04c4a68e1">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae0c02c830cf45568a7c4d35d4ed15e95">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a95d10a7b240d543a1bc6c67ddf2dc8e0">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a46c20214859cb8e112cfffc46c54d232">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a318de224195e7c953922c9f9ccfb8652">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a4d339f84e5f44af004b14d69ce10ee21">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#acc2a6a05b5587ca4ae615bff79bc6a61">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#abd2f90dc6bd506c2fd92045ba2a9e6cf">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a8aebefad50c1aa34207e118e92d7ccf0" name="a8aebefad50c1aa34207e118e92d7ccf0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8aebefad50c1aa34207e118e92d7ccf0">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
+<a id="a1fefd34491959f9936b7a065fc2d6274" name="a1fefd34491959f9936b7a065fc2d6274"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1fefd34491959f9936b7a065fc2d6274">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
 
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@@ -737,8 +844,12 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a> gridfire::engine::DynamicEngine::getSpeciesStatus </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -758,12 +869,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a> indicating whether the species is active, inactive, or culled.</dd></dl>
 <p>This method allows querying the current status of a specific species within the engine's network. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5166197fd61060b2a9a445f707ee871b">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a65af092785759559f4697c7e66bef2e3">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#afe93df16c69e7e10658c82874759dd2f">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aec5ebaccf625e39d0fa6c1330855d008">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a2947824dca9662e113153de5c6516609">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#af9de6a43920f64202c865d45ee131e10">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab8b22ee7d51ce5cc762759946967852c">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a763332410f64d2492785d2053bdad5fe">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a51abea9730a700dcffecdde9adbc0456">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#ac7232a79df901309c8f8b0b78788afe8">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="aef6ed91d922c0b1733fd7835e99d0efe" name="aef6ed91d922c0b1733fd7835e99d0efe"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aef6ed91d922c0b1733fd7835e99d0efe">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
+<a id="a92be21f072b61fcf291559246045801f" name="a92be21f072b61fcf291559246045801f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a92be21f072b61fcf291559246045801f">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -774,6 +885,11 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::DynamicEngine::getSpeciesTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -806,134 +922,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd>Map from Species to their characteristic timescales (s).</dd></dl>
 <p>This method estimates the timescale for abundance change of each species, which can be used for timestep control, diagnostics, and reaction network culling. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ade5dad29a79209e677b259a9b28c5133">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1edda1a27247480660cf7a63410f5799">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a3c9b57d2842b6b5535313be845ca6175">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a86390e410db48addfe8dbd094743c38e">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a71678a567bb0cedd8a97aff9ceddd814">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aae66fd327dc4d0e1a0e54a6e05a77e47">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae1d570486213d9bfc018a2f1ac3d4a21">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a88ee4feaa851d047d110cd0949ed845f">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af40e016e8e0206462595ccf6281411ef">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a688269fb742d37ce15926ced80fa3f70">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a5ce6ff370e3f0964c6b2688fb3f4bb7e" name="a5ce6ff370e3f0964c6b2688fb3f4bb7e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a5ce6ff370e3f0964c6b2688fb3f4bb7e">&#9670;&#160;</a></span>getStoichiometryMatrixEntry()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">virtual int gridfire::engine::DynamicEngine::getStoichiometryMatrixEntry </td>
-          <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Get an entry from the stoichiometry matrix. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">species</td><td>species to look up stoichiometry for. </td></tr>
-    <tr><td class="paramname">reaction</td><td>reaction to find </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>Stoichiometric coefficient for the species in the reaction.</dd></dl>
-<p>The stoichiometry matrix must have been generated by <a class="el" href="#a5e2c45a3e415b53e41def8f743f93464" title="Generate the stoichiometry matrix for the network.">generateStoichiometryMatrix()</a>. </p>
-
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aae6d8bab169721f0b89682ce8c4b4f10">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a600dd38a6011089527024f1625130935">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aec867f0b43e74c8157f7d5085b55bb96">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a1372e7a823841c819f6c1a15d38217a6">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a3dd5cf419f25e76e144af35df15a2067">PyDynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a79423b9f67b4cac702547b4f1d8bd14c" name="a79423b9f67b4cac702547b4f1d8bd14c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a79423b9f67b4cac702547b4f1d8bd14c">&#9670;&#160;</a></span>isStale()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">virtual bool gridfire::engine::DynamicEngine::isStale </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Check if the engine's internal state is stale. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>A struct containing the current network input, such as temperature, density, and composition. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>True if the engine's state is stale and needs to be updated; false otherwise.</dd></dl>
-<p>This method allows derived classes to determine if their internal state is out-of-date with respect to the provided network conditions. If the engine is stale, it may require a call to <code><a class="el" href="#a8dd85442ec54f20d91743c72364e36ff" title="Update the internal state of the engine.">update()</a></code> before performing calculations.</p>
-<dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1_net_in.html">NetIn</a> input = { ... };</div>
-<div class="line"><span class="keywordflow">if</span> (myEngine.isStale(input)) {</div>
-<div class="line">    <span class="comment">// Update the engine before proceeding</span></div>
-<div class="line">}</div>
-<div class="ttc" id="astructgridfire_1_1_net_in_html"><div class="ttname"><a href="structgridfire_1_1_net_in.html">gridfire::NetIn</a></div><div class="ttdef"><b>Definition</b> types.h:27</div></div>
-</div><!-- fragment --> </dd></dl>
-
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6c08b4235996d12472d2a327eab8e984">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a6ef3052fce2d5e4fdaec6659df64c2bc">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a07acc57c1015903ce3d1b0d0b7f09358">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a10dd189ba40dbb604fdf55746b5d4b79">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a55bf19ed7534a312a36faf74753f7b14">PyDynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="aa9d55b81c1963113aad86aa60c19676f" name="aa9d55b81c1963113aad86aa60c19676f"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa9d55b81c1963113aad86aa60c19676f">&#9670;&#160;</a></span>mapNetInToMolarAbundanceVector()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">virtual std::vector&lt; double &gt; gridfire::engine::DynamicEngine::mapNetInToMolarAbundanceVector </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Map a <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> object to a vector of molar abundances. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The input conditions for the network. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>A vector of molar abundances corresponding to the species in the network.</dd></dl>
-<p>This method converts the input conditions into a vector of molar abundances, which can be used for further calculations or diagnostics. </p>
-
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a24cc7e1a7471d707707b4d44ebd81068">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa053696a7885b8e42562b2d22ee32d84">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a915602acb18a69f34076bea401ffb49d">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa839c3893ff9fb8e5a4187224dac7b47">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a61bb4b430fe740cfb2c24e5cc673e4ac">PyDynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a70e270bb50910c0055a75575c1ef1e95" name="a70e270bb50910c0055a75575c1ef1e95"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a70e270bb50910c0055a75575c1ef1e95">&#9670;&#160;</a></span>primeEngine()</h2>
+<a id="a30df09678c3de1a55b7c6ac5eae35004" name="a30df09678c3de1a55b7c6ac5eae35004"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a30df09678c3de1a55b7c6ac5eae35004">&#9670;&#160;</a></span>primeEngine()</h2>
 
 <div class="memitem">
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@@ -944,8 +938,12 @@ These methods return an unfinalized composition which must then be finalized by
         <tr>
           <td class="memname">virtual <a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a> gridfire::engine::DynamicEngine::primeEngine </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -958,6 +956,7 @@ These methods return an unfinalized composition which must then be finalized by
 <p>Prime the engine with initial conditions. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">netIn</td><td>The input conditions for the network. </td></tr>
   </table>
   </dd>
@@ -965,12 +964,12 @@ These methods return an unfinalized composition which must then be finalized by
 <dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" title="Captures the result of a network priming operation.">PrimingReport</a> containing information about the priming process.</dd></dl>
 <p>This method is used to prepare the engine for calculations by setting up initial conditions, reactions, and species. It may involve compiling reaction rates, initializing internal data structures, and performing any necessary pre-computation. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a955a337f89a375637ac48071be45c54c">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2bc32a84c9f5372587fca92f2da77595">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acc7f7fb7f0ef96135e7bda4bb532792e">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afabb6222bd6cbe3277b6c8639203be25">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a6118af81e45d2850f7a2517891147274">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a27bb70d1426d6030779d83247a87b4a5">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25946bd58144c69152a7992dd2e093cc">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab77179dadc7c41551f8eb4a3321283d4">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5dff14dcced4b23c42a72108b796e783">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#a25d827397e97c638cd87223684effebc">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a2444b9ed3bc61920ce23c546444269e4" name="a2444b9ed3bc61920ce23c546444269e4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2444b9ed3bc61920ce23c546444269e4">&#9670;&#160;</a></span>rebuild()</h2>
+<a id="a260d36cc1e14ca8eda0309745e9134d9" name="a260d36cc1e14ca8eda0309745e9134d9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a260d36cc1e14ca8eda0309745e9134d9">&#9670;&#160;</a></span>project()</h2>
 
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 <div class="memproto">
@@ -979,139 +978,27 @@ These methods return an unfinalized composition which must then be finalized by
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">virtual void gridfire::engine::DynamicEngine::rebuild </td>
+          <td class="memname">virtual fourdst::composition::Composition gridfire::engine::DynamicEngine::project </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">BuildDepthType</a></td>          <td class="paramname"><span class="paramname"><em>depth</em></span>&#160;)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel virtual">virtual</span></span>  </td>
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Rebuild the network with a specified depth. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">comp</td><td>The composition to rebuild the network with. </td></tr>
-    <tr><td class="paramname">depth</td><td>The desired depth of the network.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method is intended to allow dynamic adjustment of the network's depth, which may involve adding or removing species and reactions based on the specified depth. However, not all engines support this operation. </p>
-
-<p>Reimplemented in <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6c5245a27da1b45e10fb410518b79d4e">gridfire::engine::GraphEngine</a>, and <a class="el" href="class_py_dynamic_engine.html#a25e52496b36d731127603c31e9dcaa97">PyDynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="ab321170954bffc53b1bedaf54f6976be" name="ab321170954bffc53b1bedaf54f6976be"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ab321170954bffc53b1bedaf54f6976be">&#9670;&#160;</a></span>setNetworkReactions()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">virtual void gridfire::engine::DynamicEngine::setNetworkReactions </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Set the reactions for the network. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">reactions</td><td>The set of reactions to use in the network.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method replaces the current set of reactions in the network with the provided set. It marks the engine as stale, requiring regeneration of matrices and recalculation of rates. </p>
-
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5dbfcafa606c3242dc4ced62c2494a2d">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae89529e13f2b7fd2febcfa5af40d4666">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a90251650123d0d8ce0281e18c4476f45">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa378d0e0fa6018b989d83945daa47952">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#af469cba3be850d53f659ec173f0eb4e4">PyDynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a50e76977d0dc3cc23d52b51842d35003" name="a50e76977d0dc3cc23d52b51842d35003"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a50e76977d0dc3cc23d52b51842d35003">&#9670;&#160;</a></span>setScreeningModel()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">virtual void gridfire::engine::DynamicEngine::setScreeningModel </td>
-          <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a></td>          <td class="paramname"><span class="paramname"><em>model</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Set the electron screening model. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">model</td><td>The type of screening model to use for reaction rate calculations.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method allows changing the screening model at runtime. Screening corrections account for the electrostatic shielding of nuclei by electrons, which affects reaction rates in dense stellar plasmas.</p>
-<dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line">myEngine.setScreeningModel(<a class="code hl_enumvalue" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">screening::ScreeningType::WEAK</a>);</div>
-<div class="ttc" id="anamespacegridfire_1_1screening_html_aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8"><div class="ttname"><a href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">gridfire::screening::ScreeningType::WEAK</a></div><div class="ttdeci">@ WEAK</div><div class="ttdoc">Weak screening model (Salpeter, 1954).</div><div class="ttdef"><b>Definition</b> screening_types.h:35</div></div>
-</div><!-- fragment --></dd></dl>
-<dl class="section post"><dt>Postcondition</dt><dd>The engine will use the specified screening model for subsequent rate calculations. </dd></dl>
-
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ab050409db954a3fa593633f9d2cd5d89">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a68bd0e51d3e127e5f9fd74fdb8180fd9">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af842981deaf84a698b6cbfa66abcb715">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad11aa1e168ec03d0c3ed90eeddcefe52">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#afa3abfd612033336a656f092721c14ac">PyDynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a8dd85442ec54f20d91743c72364e36ff" name="a8dd85442ec54f20d91743c72364e36ff"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8dd85442ec54f20d91743c72364e36ff">&#9670;&#160;</a></span>update()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">virtual fourdst::composition::Composition gridfire::engine::DynamicEngine::update </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Update the internal state of the engine. </p>
+<p>Update the thread local scratch pad state of a network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratchpad context for the current state. </td></tr>
     <tr><td class="paramname">netIn</td><td>A struct containing the current network input, such as temperature, density, and composition.</td></tr>
   </table>
   </dd>
@@ -1119,10 +1006,11 @@ These methods return an unfinalized composition which must then be finalized by
 <p>This method is intended to be implemented by derived classes to update their internal state based on the provided network conditions. For example, an adaptive engine might use this to re-evaluate which reactions and species are active. For other engines that do not support manually updating, this method might do nothing.</p>
 <dl class="section user"><dt>Usage Example:</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1_net_in.html">NetIn</a> input = { ... };</div>
 <div class="line">myEngine.update(input);</div>
+<div class="ttc" id="astructgridfire_1_1_net_in_html"><div class="ttname"><a href="structgridfire_1_1_net_in.html">gridfire::NetIn</a></div><div class="ttdef"><b>Definition</b> types.h:27</div></div>
 </div><!-- fragment --></dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>The internal state of the engine is updated to reflect the new conditions. </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a8db6ba52f454c136ee0a1335436fab6e">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1d99b55bf8e94bc2397715aa1f916733">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a7f6d98a9a4f22f1bbc015b1cbb8198e3">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a28c8ac1ec594cf55a297e3f9586e214a">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#af8e6a8cd44f278535d7bcc9a896d6da8">PyDynamicEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aa7b6561da6dd8513fef5c8c03737d433">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af52e0ce2ce80f08642c9a6dbf0adc929">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a58221a92813e13e43de48525980301d4">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a063c097e6afdadabbb79fabd61b21d0b">gridfire::engine::MultiscalePartitioningEngineView</a>, and <a class="el" href="class_py_dynamic_engine.html#abe31184ce7e63f7428b4a31ab39e7a8d">PyDynamicEngine</a>.</p>
 
 </div>
 </div>
diff --git a/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.js b/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.js
index a383c08b..b7f093eb 100644
--- a/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.js
+++ b/docs/html/classgridfire_1_1engine_1_1_dynamic_engine.js
@@ -1,25 +1,21 @@
 var classgridfire_1_1engine_1_1_dynamic_engine =
 [
-    [ "calculateEpsDerivatives", "classgridfire_1_1engine_1_1_dynamic_engine.html#ada6a1295a92c2aede841672ecae0cede", null ],
-    [ "calculateMolarReactionFlow", "classgridfire_1_1engine_1_1_dynamic_engine.html#aa57fa5e58b98a03fba31bcddda8001d4", null ],
-    [ "collectComposition", "classgridfire_1_1engine_1_1_dynamic_engine.html#a41877719ae5e8de53c1692c7cf9bfbfc", null ],
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-    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_dynamic_engine.html#a15d53dac8b622a3b7d0f928a3995dbde", null ],
-    [ "generateStoichiometryMatrix", "classgridfire_1_1engine_1_1_dynamic_engine.html#a5e2c45a3e415b53e41def8f743f93464", null ],
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-    [ "getNetworkReactions", "classgridfire_1_1engine_1_1_dynamic_engine.html#a26b59a4c7622bf820c0eeec6a7522aa8", null ],
-    [ "getScreeningModel", "classgridfire_1_1engine_1_1_dynamic_engine.html#a24103027a38e02d4342161164554d332", null ],
-    [ "getSpeciesDestructionTimescales", "classgridfire_1_1engine_1_1_dynamic_engine.html#aefc5d0f7842b27a108ba1e4ca346e9a0", null ],
-    [ "getSpeciesIndex", "classgridfire_1_1engine_1_1_dynamic_engine.html#ac0f40017603e8e6887b75dc7360d7c5e", null ],
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-    [ "getStoichiometryMatrixEntry", "classgridfire_1_1engine_1_1_dynamic_engine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e", null ],
-    [ "isStale", "classgridfire_1_1engine_1_1_dynamic_engine.html#a79423b9f67b4cac702547b4f1d8bd14c", null ],
-    [ "mapNetInToMolarAbundanceVector", "classgridfire_1_1engine_1_1_dynamic_engine.html#aa9d55b81c1963113aad86aa60c19676f", null ],
-    [ "primeEngine", "classgridfire_1_1engine_1_1_dynamic_engine.html#a70e270bb50910c0055a75575c1ef1e95", null ],
-    [ "rebuild", "classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4", null ],
-    [ "setNetworkReactions", "classgridfire_1_1engine_1_1_dynamic_engine.html#ab321170954bffc53b1bedaf54f6976be", null ],
-    [ "setScreeningModel", "classgridfire_1_1engine_1_1_dynamic_engine.html#a50e76977d0dc3cc23d52b51842d35003", null ],
-    [ "update", "classgridfire_1_1engine_1_1_dynamic_engine.html#a8dd85442ec54f20d91743c72364e36ff", null ]
+    [ "calculateEpsDerivatives", "classgridfire_1_1engine_1_1_dynamic_engine.html#a3fd5d4f3c58d1790b7a517b5ef888eaf", null ],
+    [ "calculateMolarReactionFlow", "classgridfire_1_1engine_1_1_dynamic_engine.html#abf0f13b9eae66da6119e6fca826379e8", null ],
+    [ "collectComposition", "classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec", null ],
+    [ "constructStateBlob", "classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90", null ],
+    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_dynamic_engine.html#ab6d95491f017feb4c43d9fa05739fcd0", null ],
+    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_dynamic_engine.html#a78f7b315bfa0a1f34d8fd5ab652b6934", null ],
+    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_dynamic_engine.html#a983551b5fef4610799c062cb5be2b1c7", null ],
+    [ "getInactiveNetworkReactions", "classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15", null ],
+    [ "getInactiveReactionMolarReactionFlow", "classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972", null ],
+    [ "getMostRecentRHSCalculation", "classgridfire_1_1engine_1_1_dynamic_engine.html#a30cc7809d53540bd3407d971de8eec48", null ],
+    [ "getNetworkReactions", "classgridfire_1_1engine_1_1_dynamic_engine.html#a77a889cbc3791beca4abb95cb663a4d6", null ],
+    [ "getScreeningModel", "classgridfire_1_1engine_1_1_dynamic_engine.html#a60834e4bcfb2e4ec21a9cbf7bb9f7363", null ],
+    [ "getSpeciesDestructionTimescales", "classgridfire_1_1engine_1_1_dynamic_engine.html#a128dd0a7f738f93092c437eeda983fdf", null ],
+    [ "getSpeciesIndex", "classgridfire_1_1engine_1_1_dynamic_engine.html#a16bd2fae51fa738da62f2a767f6875d2", null ],
+    [ "getSpeciesStatus", "classgridfire_1_1engine_1_1_dynamic_engine.html#a1fefd34491959f9936b7a065fc2d6274", null ],
+    [ "getSpeciesTimescales", "classgridfire_1_1engine_1_1_dynamic_engine.html#a92be21f072b61fcf291559246045801f", null ],
+    [ "primeEngine", "classgridfire_1_1engine_1_1_dynamic_engine.html#a30df09678c3de1a55b7c6ac5eae35004", null ],
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diff --git a/docs/html/classgridfire_1_1engine_1_1_engine-members.html b/docs/html/classgridfire_1_1engine_1_1_engine-members.html
index 45ccc606..573807bc 100644
--- a/docs/html/classgridfire_1_1engine_1_1_engine-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_engine-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,8 +105,8 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_engine.html',''); initResi
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">getNetworkSpecies</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
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 </table></div><!-- contents -->
 </div><!-- doc-content -->
diff --git a/docs/html/classgridfire_1_1engine_1_1_engine.html b/docs/html/classgridfire_1_1engine_1_1_engine.html
index f3c74631..9dd07367 100644
--- a/docs/html/classgridfire_1_1engine_1_1_engine.html
+++ b/docs/html/classgridfire_1_1engine_1_1_engine.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -121,12 +121,12 @@ Public Member Functions</h2></td></tr>
 <tr class="memitem:af0ea99416c28933d364a872fc6aff556" id="r_af0ea99416c28933d364a872fc6aff556"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af0ea99416c28933d364a872fc6aff556">~Engine</a> ()=default</td></tr>
 <tr class="memdesc:af0ea99416c28933d364a872fc6aff556"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
 <tr class="separator:af0ea99416c28933d364a872fc6aff556"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a3263c3fde2509d5d8ec4da3b6e946c48" id="r_a3263c3fde2509d5d8ec4da3b6e946c48"><td class="memItemLeft" align="right" valign="top">virtual const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3263c3fde2509d5d8ec4da3b6e946c48">getNetworkSpecies</a> () const =0</td></tr>
-<tr class="memdesc:a3263c3fde2509d5d8ec4da3b6e946c48"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the list of species in the network.  <br /></td></tr>
-<tr class="separator:a3263c3fde2509d5d8ec4da3b6e946c48"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a764fc091c72c12c8529105d7c96badb2" id="r_a764fc091c72c12c8529105d7c96badb2"><td class="memItemLeft" align="right" valign="top">virtual std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a764fc091c72c12c8529105d7c96badb2">calculateRHSAndEnergy</a> (const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const =0</td></tr>
-<tr class="memdesc:a764fc091c72c12c8529105d7c96badb2"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the right-hand side (dY/dt) and energy generation.  <br /></td></tr>
-<tr class="separator:a764fc091c72c12c8529105d7c96badb2"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afa8b1970e20f4bab61e4d31ead09f930" id="r_afa8b1970e20f4bab61e4d31ead09f930"><td class="memItemLeft" align="right" valign="top">virtual const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#afa8b1970e20f4bab61e4d31ead09f930">getNetworkSpecies</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx) const =0</td></tr>
+<tr class="memdesc:afa8b1970e20f4bab61e4d31ead09f930"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the list of species in the network.  <br /></td></tr>
+<tr class="separator:afa8b1970e20f4bab61e4d31ead09f930"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a71c9ed5e0810799cd6af1d8ffbc8a918" id="r_a71c9ed5e0810799cd6af1d8ffbc8a918"><td class="memItemLeft" align="right" valign="top">virtual std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a71c9ed5e0810799cd6af1d8ffbc8a918">calculateRHSAndEnergy</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const =0</td></tr>
+<tr class="memdesc:a71c9ed5e0810799cd6af1d8ffbc8a918"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the right-hand side (dY/dt) and energy generation.  <br /></td></tr>
+<tr class="separator:a71c9ed5e0810799cd6af1d8ffbc8a918"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Abstract base class for a reaction network engine. </p>
@@ -164,8 +164,8 @@ Public Member Functions</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a764fc091c72c12c8529105d7c96badb2" name="a764fc091c72c12c8529105d7c96badb2"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a764fc091c72c12c8529105d7c96badb2">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
+<a id="a71c9ed5e0810799cd6af1d8ffbc8a918" name="a71c9ed5e0810799cd6af1d8ffbc8a918"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a71c9ed5e0810799cd6af1d8ffbc8a918">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -176,6 +176,11 @@ Public Member Functions</h2></td></tr>
         <tr>
           <td class="memname">virtual std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::Engine::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em></em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -186,7 +191,12 @@ Public Member Functions</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -202,18 +212,19 @@ Public Member Functions</h2></td></tr>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td>If true, indicates that the engine should trust the passed composition has already been collected. </td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>expected&lt;StepDerivatives&lt;double&gt;&gt; containing either dY/dt and energy generation rate or a stale engine error indicating that the engine must be updated</dd></dl>
 <p>This function must be implemented by derived classes to compute the time derivatives of all species and the specific nuclear energy generation rate for the current state. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a5de5211bc99a1995143307284be6df4a">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a82cbef591ef1aafcb9a42e01bf38fc38">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aee098a65f5cecded199d2c00422b398d">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa960005503d18066015aef280680d616">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#aac1f2005c0a58befc4e01627c9357924">PyDynamicEngine</a>, and <a class="el" href="class_py_engine.html#abc26a86d4f93b37564d32814edbbac4d">PyEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a4c51bcc65f1bc6afdb9487546775ce79">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a297412202e82ab25b6fc0a8a27a433e7">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a474ba2ca2d24cb90ee73af042993dd14">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add1058c32fbd02f5583cfda4cc60985c">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a1331900141bb079e634151abdea075dc">PyDynamicEngine</a>, and <a class="el" href="class_py_engine.html#a63a2605b8d742d284924db397338da0b">PyEngine</a>.</p>
 
 </div>
 </div>
-<a id="a3263c3fde2509d5d8ec4da3b6e946c48" name="a3263c3fde2509d5d8ec4da3b6e946c48"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a3263c3fde2509d5d8ec4da3b6e946c48">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
+<a id="afa8b1970e20f4bab61e4d31ead09f930" name="afa8b1970e20f4bab61e4d31ead09f930"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afa8b1970e20f4bab61e4d31ead09f930">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -224,7 +235,7 @@ Public Member Functions</h2></td></tr>
         <tr>
           <td class="memname">virtual const std::vector&lt; fourdst::atomic::Species &gt; &amp; gridfire::engine::Engine::getNetworkSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -238,7 +249,7 @@ Public Member Functions</h2></td></tr>
 <p>Get the list of species in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>Vector of Species objects representing all network species. </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aaa2d47f44e5bb4d9660d7c017cc5085c">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a0af3e1ac0314a485171f1dda39929cb4">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8f5099bfda5f6d6e1494788beff9b7c8">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa7aa38cf054988d050c04c59f28efdaa">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#afc745e7ab5da5d8b3cf916044515cd7d">PyDynamicEngine</a>, and <a class="el" href="class_py_engine.html#a2d240423899e039c2ca688e96f8af1f2">PyEngine</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a729b8f6846cbffa746085c038108ef29">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8dfbe8792e112e33623cf5bf44696376">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6b7e2d8391114f25d74d986d919715c9">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9a43b1fe2124333acd338acffeb2e8c7">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a75450cd1eee0d9d79b23eafbf452aa02">PyDynamicEngine</a>, and <a class="el" href="class_py_engine.html#a5daac50566c2a15c65b8f94b1758b04e">PyEngine</a>.</p>
 
 </div>
 </div>
diff --git a/docs/html/classgridfire_1_1engine_1_1_engine.js b/docs/html/classgridfire_1_1engine_1_1_engine.js
index 4b8a57e8..224db5b9 100644
--- a/docs/html/classgridfire_1_1engine_1_1_engine.js
+++ b/docs/html/classgridfire_1_1engine_1_1_engine.js
@@ -1,6 +1,6 @@
 var classgridfire_1_1engine_1_1_engine =
 [
     [ "~Engine", "classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556", null ],
-    [ "calculateRHSAndEnergy", "classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2", null ],
-    [ "getNetworkSpecies", "classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48", null ]
+    [ "calculateRHSAndEnergy", "classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918", null ],
+    [ "getNetworkSpecies", "classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930", null ]
 ];
\ No newline at end of file
diff --git a/docs/html/classgridfire_1_1engine_1_1_engine_view-members.html b/docs/html/classgridfire_1_1engine_1_1_engine_view-members.html
index de9be2b2..0963a3d8 100644
--- a/docs/html/classgridfire_1_1engine_1_1_engine_view-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1engine_1_1_engine_view.html b/docs/html/classgridfire_1_1engine_1_1_engine_view.html
index 82ad5bd2..14a1fce9 100644
--- a/docs/html/classgridfire_1_1engine_1_1_engine_view.html
+++ b/docs/html/classgridfire_1_1engine_1_1_engine_view.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -139,8 +139,8 @@ class gridfire::engine::EngineView&lt; EngineT &gt;</div><p>Abstract base class
 <div class="line"><span class="keyword">private</span>:</div>
 <div class="line">    DynamicEngine&amp; engine_;</div>
 <div class="line">};</div>
-<div class="ttc" id="aclassgridfire_1_1engine_1_1_dynamic_engine_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></div><div class="ttdoc">Abstract class for engines supporting Jacobian and stoichiometry operations.</div><div class="ttdef"><b>Definition</b> engine_abstract.h:175</div></div>
-<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:38</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_dynamic_engine_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></div><div class="ttdoc">Abstract class for engines supporting Jacobian and stoichiometry operations.</div><div class="ttdef"><b>Definition</b> engine_abstract.h:183</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
 </div><!-- fragment --><dl class="section see"><dt>See also</dt><dd>gridfire::AdaptiveEngineView for a concrete example of dynamic culling. </dd></dl>
 </div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
 <a id="a17d63e853d6efca31064e9147c80d497" name="a17d63e853d6efca31064e9147c80d497"></a>
diff --git a/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view-members.html b/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view-members.html
index 17bb983b..354ee2af 100644
--- a/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,56 +105,44 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_file_defined_engine_view.h
 
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-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2f0ad1febc467bce87b5c6ad29b059fb">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a82cbef591ef1aafcb9a42e01bf38fc38">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a38191e2b3b219d348eba0109dce271c3">collect</a>(const std::vector&lt; std::string &gt; &amp;peNames)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25dc44af1a58561b665103b16abe9bbc">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a8d066e95f4cc201cbda90c2aec5d98c4">Config</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8464c50142f34583201c4abc7fbcba36">constructReactionIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a20b54c8b13616982eddb3ae3979b842d">constructSpeciesIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6e0458acf7855ff6472b96801048479">calculateEpsDerivatives</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb78ba1245f5b61a29d6163c4548f6b6">calculateMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a297412202e82ab25b6fc0a8a27a433e7">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a59680b2c95412edc7d9cda939282f2e1">collect</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; std::string &gt; &amp;peNames) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4002e188995b6c203dc391f381432e5b">collectComposition</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af058b09a44f30332eece13f0d4ce9d9d">constructReactionIndexMap</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a85db72e3c0a4ce59345b6b92695a5d12">constructSpeciesIndexMap</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ac126bed6dcdfa6b2888efa3a769b4490">constructStateBlob</a>(const scratch::StateBlob *blob) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ada2f326789dc8ae8305617c8d700ae05">DefinedEngineView</a>(const std::vector&lt; std::string &gt; &amp;peNames, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a2ac3834f2d8b916db40fe71c0f070a00">FileDefinedEngineView</a>(GraphEngine &amp;baseEngine, const std::string &amp;fileName, const io::NetworkFileParser &amp;parser)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4d90439d99da61107d95319b970760bc">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4966f8cbc859ce2a8a465516d0c0abd0">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1de5867a0e633de0d0d96ac4fbb141e5">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af4049e5570bd143d41cab1d4005b6824">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6f82ef31b99bfe8a6c4e475bcdb96f8">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac5a0def6b6af0bd93bf9057c25f048ff">getDepth</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a73fc090d69db6a99d7694c1de8ff46db">getNetworkFile</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a81732c1b2d08451849c1ddf833246892">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a0af3e1ac0314a485171f1dda39929cb4">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a6f2b445d16ea375ce00d7bd3318fed77">getParser</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a413b111f6a643d7aecbae01dd0f82640">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab051d976dbecf325747d54efe7834d04">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb3c67ce20746b9acb2766920b8f397b">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a65af092785759559f4697c7e66bef2e3">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1edda1a27247480660cf7a63410f5799">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a600dd38a6011089527024f1625130935">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a6ef3052fce2d5e4fdaec6659df64c2bc">isStale</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#af2183aba50db8f91055042425fb84766">LogManager</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae8ac4dc44a6c9f3588d6dd02b39a4cc9">m_activeReactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aad986ed7c9602ba042999cf0a30ed70c">m_activeSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#add093054fe3ba60f99b04f7f3bda4ba3">m_activeSpeciesVectorCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1e46935f049537e675fb132564d6eacd">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a6a664b568caf7ec207a10be6a56e52f1">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a94b66aa4396d98aa78900c2b6bcf0526">m_fileName</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3156dfef68cd3636f8cf7a13b5388e75">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#af8e65c1eee99938437aa649675182a06">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a3c438706106a7f1bf27f3015e2a64205">m_parser</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa9a26262300b0982b847a72425dc373a">m_reactionIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a26af4be40216ee3ea5b7fff49fe7a00c">m_speciesIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a391bc4b5d946ea606cf7661955191d12">mapFullToView</a>(const std::vector&lt; double &gt; &amp;full) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa053696a7885b8e42562b2d22ee32d84">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa352f3ba0e689d3f81711c17f4f67dfc">mapViewToFull</a>(const std::vector&lt; double &gt; &amp;defined) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afa9aeb6d11645e4b9cecf56fb63b51ef">mapViewToFullReactionIndex</a>(size_t definedReactionIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ad6986fa5cda1d9ed9d4f54f444f402e8">mapViewToFullSpeciesIndex</a>(size_t definedSpeciesIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2bc32a84c9f5372587fca92f2da77595">primeEngine</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae89529e13f2b7fd2febcfa5af40d4666">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a68bd0e51d3e127e5f9fd74fdb8180fd9">setScreeningModel</a>(screening::ScreeningType model) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1d99b55bf8e94bc2397715aa1f916733">update</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a91ea88e43c17f99ff0d95a8f54b09cbf">validateNetworkState</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa7d5c9288cfe23aa4435a89210280d83">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1457e3aa9caae5d2fba17adc62f47c79">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a37ba76a5a0d0cb46d93df1982f196f11">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6f82ef31b99bfe8a6c4e475bcdb96f8">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8d2685b85a46c3979ca23db7eaa618b5">getMostRecentRHSCalculation</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a73fc090d69db6a99d7694c1de8ff46db">getNetworkFile</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#acec78c23ab9a29c6fe930cb54388e6eb">getNetworkReactions</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8dfbe8792e112e33623cf5bf44696376">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a6f2b445d16ea375ce00d7bd3318fed77">getParser</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a112fa152ca631af4dfd053e8689af7f5">getScreeningModel</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a992c39d65298e3b58e529825889b7eea">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a318de224195e7c953922c9f9ccfb8652">getSpeciesIndex</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab8b22ee7d51ce5cc762759946967852c">getSpeciesStatus</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae1d570486213d9bfc018a2f1ac3d4a21">getSpeciesTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1e46935f049537e675fb132564d6eacd">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a22c2d54a2aa336a55e0b0efeb5b9a806">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a94b66aa4396d98aa78900c2b6bcf0526">m_fileName</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3156dfef68cd3636f8cf7a13b5388e75">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#af8e65c1eee99938437aa649675182a06">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a3c438706106a7f1bf27f3015e2a64205">m_parser</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a47fc5027c1d787319f691751a0e043c7">mapFullToView</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;full)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a189092508a38a8f78b432d9470dd2e7f">mapViewToFull</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;defined) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af184e1166e3a0a74418af17226995c74">mapViewToFullReactionIndex</a>(scratch::StateBlob &amp;ctx, size_t definedReactionIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a9d28efabfafecf32b9f7e11164856132">mapViewToFullSpeciesIndex</a>(scratch::StateBlob &amp;ctx, size_t definedSpeciesIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25946bd58144c69152a7992dd2e093cc">primeEngine</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af52e0ce2ce80f08642c9a6dbf0adc929">project</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
diff --git a/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view.html b/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view.html
index f367e8a6..624d4fcc 100644
--- a/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view.html
+++ b/docs/html/classgridfire_1_1engine_1_1_file_defined_engine_view.html
@@ -29,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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 <div class="header">
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+<text xml:space="preserve" text-anchor="start" x="876.75" y="-701.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="876.75" y="-690.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; JacobianMatrixState,</text>
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+<text xml:space="preserve" text-anchor="start" x="227.25" y="-623" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string&lt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="266.25" y="-475.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="266.25" y="-354.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-403.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
+<text xml:space="preserve" text-anchor="start" x="728" y="-392.38" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::reaction</text>
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+<!-- Node20&#45;&gt;Node36 -->
+<g id="edge42_Node000036_Node000020" class="edge">
+<title>Node20&#45;&gt;Node36</title>
+<g id="a_edge42_Node000036_Node000020"><a xlink:title=" ">
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-1074" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reaction</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-60" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reaction</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-128.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-486.54" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
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-<text xml:space="preserve" text-anchor="start" x="739.25" y="-199" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-187.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
+<polygon fill="white" stroke="#666666" points="828.25,-465.5 731.25,-465.5 731.25,-435 828.25,-435 828.25,-465.5"/>
+<text xml:space="preserve" text-anchor="start" x="739.25" y="-452" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-440.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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@@ -575,28 +565,28 @@ var sectionId = 'dynsection-1';
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-199" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-451.68" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-866.48" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-288.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-813.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
+<polygon fill="white" stroke="#666666" points="822.25,-250.88 737.25,-250.88 737.25,-231.62 822.25,-231.62 822.25,-250.88"/>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-237.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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@@ -604,20 +594,20 @@ var sectionId = 'dynsection-1';
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-847.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-240.09" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-813.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-802.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-353.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-342.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-331.12" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-811.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-314.04" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="448.38" y="-819" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-807.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="448.38" y="-243" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-231.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.62" y="-645" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-633.75" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-294" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-282.75" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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@@ -664,30 +654,30 @@ var sectionId = 'dynsection-1';
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-660.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-347.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-402.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-547.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-536.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-525.12" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-174.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-163.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-152.12" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-590.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-225.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1025.12" y="-440.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-114.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-103.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, fourdst::atomic</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-92.12" font-family="Helvetica,sans-Serif" font-size="10.00">::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-647" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
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+<text xml:space="preserve" text-anchor="middle" x="266.25" y="-354.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="394.25" y="-362.32" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> rhoYe_axis</text>
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+<text xml:space="preserve" text-anchor="start" x="189.75" y="-317" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-470.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactions</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-403.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
+<text xml:space="preserve" text-anchor="start" x="728" y="-392.38" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::reaction</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-381.12" font-family="Helvetica,sans-Serif" font-size="10.00">::Reaction &gt; &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-515.75" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="445.75" y="-292" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-280.75" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-245.25" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-234" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-486.54" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
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-<text xml:space="preserve" text-anchor="start" x="739.25" y="-199" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-187.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
+<polygon fill="white" stroke="#666666" points="828.25,-465.5 731.25,-465.5 731.25,-435 828.25,-435 828.25,-465.5"/>
+<text xml:space="preserve" text-anchor="start" x="739.25" y="-452" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-440.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-451.68" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-288.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-813.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-237.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-240.09" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-813.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-353.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-342.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-331.12" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="448.38" y="-819" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-807.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="448.38" y="-243" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-231.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.62" y="-645" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-294" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-282.75" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-347.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-402.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-174.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-163.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
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+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-114.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="1013.88" y="-743" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_graph_engine-members.html b/docs/html/classgridfire_1_1engine_1_1_graph_engine-members.html
index 73e824ac..66d8fbb6 100644
--- a/docs/html/classgridfire_1_1engine_1_1_graph_engine-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_graph_engine-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,91 +105,89 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_graph_engine.html',''); in
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a5970c97be4c7b5b764ce1155b5c7f870">calculateAllDerivatives</a>(const std::vector&lt; T &gt; &amp;Y_in, T T9, T rho, T Ye, T mue, std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; speciesLookup, const std::function&lt; bool(const reaction::Reaction &amp;)&gt; &amp;reactionLookup) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a23187ad3ee504de46f59e1644c715c9f">calculateAllDerivatives</a>(const std::vector&lt; T &gt; &amp;Y_in, const T T9, const T rho, const T Ye, const T mue, const std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; speciesLookup, const std::function&lt; bool(const reaction::Reaction &amp;)&gt; &amp;reactionLookup) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#abdd3ea788cbe3448b11969c7bbe09546">calculateAllDerivativesUsingPrecomputation</a>(const fourdst::composition::CompositionAbstract &amp;comp, const std::vector&lt; double &gt; &amp;bare_rates, const std::vector&lt; double &gt; &amp;bare_reverse_rates, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac7e4624ed6eee72e7a8df42381d098bb">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a194b03e287ec31348583f8d2078d4906">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aaff9cdc04ca01e7c927d36476bcf5da4">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aab80f2ab29ad9c7867e75e499148aa1f">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const std::vector&lt; T &gt; &amp;Y, T T9, T rho, T Ye, T mue, const std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; &amp;speciesIDLookup) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2e7012382ee44473478ebc37ac36695c">calculateReverseMolarReactionFlow</a>(T T9, T rho, std::vector&lt; T &gt; screeningFactors, const std::vector&lt; T &gt; &amp;Y, size_t reactionIndex, const reaction::Reaction &amp;reaction) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a4dd5733c77e9a7ad8b5e541c187fabae">calculateReverseRate</a>(const reaction::Reaction &amp;reaction, double T9, double rho, const fourdst::composition::CompositionAbstract &amp;comp) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aa6b07108beeab1bc75c3099c25be7833">calculateReverseRateTwoBody</a>(const reaction::Reaction &amp;reaction, double T9, double forwardRate, double expFactor) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a83ef40080c62d667b3fee71237efd2e0">calculateReverseRateTwoBodyDerivative</a>(const reaction::Reaction &amp;reaction, double T9, double rho, const fourdst::composition::Composition &amp;comp, double reverseRate) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aee098a65f5cecded199d2c00422b398d">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac77d4150b3b070a095fb65346968e51b">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a5fadd1bb2692e1527ce24295c77cfc72">collectAtomicReverseRateAtomicBases</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ae9d4d99c791876c012697fe5a0ba06c8">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8f29c77e777fdc6517f2c7778537ba6f">collectNetworkSpecies</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2c0c50ba51537a2f565183e2f47eef69">exportToCSV</a>(const std::string &amp;filename) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a77d9755e68c81279316c96e6bb160ee4">exportToDot</a>(const std::string &amp;filename) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a9ca013f203d7a3ef9d1b9ee4b2982cb0">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acc28ff627d46d8d4066a1acf830cbe27">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac4f9cd4e2304f681dd9af0f7b751cb81">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2221feee40542efa1c07f01225bd3828">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab29d6c4a7c789cf3d75767833c80c658">getDepth</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a663fd2bd0eda255bc242c1dc6338bc11">getNetReactionStoichiometry</a>(const reaction::Reaction &amp;reaction)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a749cc482a707cb3a38bdd5de894716e2">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8f5099bfda5f6d6e1494788beff9b7c8">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a4247cf6a551a7cbc951a733d3c31c325">getPartitionFunction</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a62c6f3bebe931bcd412fb492deb634a5">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ae026bc87dc8b24fd78d412ac7e58b148">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0ea1eedfd79ccbd3d44241eadd65065b">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad67b0022cc783e63ae1954a04c4a68e1">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#afe93df16c69e7e10658c82874759dd2f">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a3c9b57d2842b6b5535313be845ca6175">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2f196db621e81082430be117c72fa9d0">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aec867f0b43e74c8157f7d5085b55bb96">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab5c4f7868ccd28fcf256e1e252c78517">accumulate_flows_serial</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;local_abundances, const std::vector&lt; double &gt; &amp;screening_factors, const std::vector&lt; double &gt; &amp;bare_rates, const std::vector&lt; double &gt; &amp;bare_reverse_rates, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0dca83ce5226859b6b605889aca8ecc9">addReaction</a>(const reaction::Reaction &amp;reaction)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6288b4006fb9d43dc4ef199f3b9f91fe">addReaction</a>(const std::string &amp;reaction_id)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a5970c97be4c7b5b764ce1155b5c7f870">calculateAllDerivatives</a>(const std::vector&lt; T &gt; &amp;Y_in, T T9, T rho, T Ye, T mue, std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; speciesLookup, const std::function&lt; bool(const reaction::Reaction &amp;)&gt; &amp;reactionLookup) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a23187ad3ee504de46f59e1644c715c9f">calculateAllDerivatives</a>(const std::vector&lt; T &gt; &amp;Y_in, const T T9, const T rho, const T Ye, const T mue, const std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; speciesLookup, const std::function&lt; bool(const reaction::Reaction &amp;)&gt; &amp;reactionLookup) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad3ab19d036a9f1484f527442b2dad958">calculateAllDerivativesUsingPrecomputation</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, const std::vector&lt; double &gt; &amp;bare_rates, const std::vector&lt; double &gt; &amp;bare_reverse_rates, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aa265b90b5ec153e1e71acb2d0e8fad36">calculateEpsDerivatives</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a00398599c658d7c0cebfd15f6465ea7d">calculateEpsDerivatives</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a154eda68e5df7f45b0e59b17761177b3">calculateMolarReactionFlow</a>(scratch::StateBlob &amp;, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aab80f2ab29ad9c7867e75e499148aa1f">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const std::vector&lt; T &gt; &amp;Y, T T9, T rho, T Ye, T mue, const std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; &amp;speciesIDLookup) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2e7012382ee44473478ebc37ac36695c">calculateReverseMolarReactionFlow</a>(T T9, T rho, std::vector&lt; T &gt; screeningFactors, const std::vector&lt; T &gt; &amp;Y, size_t reactionIndex, const reaction::Reaction &amp;reaction) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a4dd5733c77e9a7ad8b5e541c187fabae">calculateReverseRate</a>(const reaction::Reaction &amp;reaction, double T9, double rho, const fourdst::composition::CompositionAbstract &amp;comp) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aa6b07108beeab1bc75c3099c25be7833">calculateReverseRateTwoBody</a>(const reaction::Reaction &amp;reaction, double T9, double forwardRate, double expFactor) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a83ef40080c62d667b3fee71237efd2e0">calculateReverseRateTwoBodyDerivative</a>(const reaction::Reaction &amp;reaction, double T9, double rho, const fourdst::composition::Composition &amp;comp, double reverseRate) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a474ba2ca2d24cb90ee73af042993dd14">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a7bd6fbf8bc5256a3437ea2731fadf4e4">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a5fadd1bb2692e1527ce24295c77cfc72">collectAtomicReverseRateAtomicBases</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a1c977a772eedae1cceeb6b50d984fde4">collectComposition</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8f29c77e777fdc6517f2c7778537ba6f">collectNetworkSpecies</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a698cbb0c4e0028924b116906787e342a">compute_neutrino_fluxes</a>(scratch::StateBlob &amp;ctx, double netFlow, const reaction::Reaction &amp;reaction) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad6b75b38b3c67276ad5fe254a36bf8f6">compute_reaction_flow</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;local_abundances, const std::vector&lt; double &gt; &amp;screening_factors, const std::vector&lt; double &gt; &amp;bare_rates, const std::vector&lt; double &gt; &amp;bare_reverse_rates, double rho, size_t reactionCounter, const reaction::Reaction &amp;reaction, size_t reactionIndex, const PrecomputedReaction &amp;precomputedReaction) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acfe338ed3b10a4f116e58b2693a7fe10">constructStateBlob</a>(const scratch::StateBlob *blob=nullptr) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#adab81a7a56e2d9fd1ca46c20bf971912">exportToCSV</a>(scratch::StateBlob &amp;ctx, const std::string &amp;filename) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac5f6bbc54d65a974dce4ad407617779a">exportToDot</a>(scratch::StateBlob &amp;ctx, const std::string &amp;filename) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acaef2178b6bd13ee478a9aa03bd12da9">generate_jacobian_sparsity_pattern</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab7efbe72c39d2828eeed4e20f319a2c8">generateJacobianMatrix</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a72130974401a22155dfd9a2e68192d56">generateJacobianMatrix</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a7704e02c04de922ae6b01f4ba2b88148">generateJacobianMatrix</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a769ac1cbf84d20afe66598aa325e7f7c">get_store_intermediate_reaction_contributions</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0faf9ad41f916c09e65d58890a854248">getAuthoritativeADFun</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0e484a5fcabc2ced4552e92078fcc03d">getMostRecentRHSCalculation</a>(scratch::StateBlob &amp;) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a90e87465ba1e80af7124c0e4614d433b">getNetworkReactions</a>(scratch::StateBlob &amp;) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6b7e2d8391114f25d74d986d919715c9">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a3ef1320e4fb1160d37f93e3eefd38c50">getPartitionFunction</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a69b478b15844d145219c9c5a4e515e59">getScreeningModel</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a32ab9175e93ae29f87b0903400cb3521">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ae2a9f08ef597884e61a7d8e53c23ef17">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a4d339f84e5f44af004b14d69ce10ee21">getSpeciesIndex</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a763332410f64d2492785d2053bdad5fe">getSpeciesStatus</a>(scratch::StateBlob &amp;, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a88ee4feaa851d047d110cd0949ed845f">getSpeciesTimescales</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a39d800c17b054f10a47100b552364902">getSpeciesTimescales</a>(scratch::StateBlob &amp;, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const reaction::ReactionSet &amp;activeReactions) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a530a5563c5a7a76650edb1657868a289">GraphEngine</a>(const fourdst::composition::Composition &amp;composition, BuildDepthType=NetworkBuildDepth::Full)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a885887bc4ff09c810e79eb68b79e7e2a">GraphEngine</a>(const fourdst::composition::Composition &amp;composition, const partition::PartitionFunction &amp;partitionFunction, BuildDepthType buildDepth=NetworkBuildDepth::Full)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad73fec5f24f5ee74020ca70cdaa104e3">GraphEngine</a>(const fourdst::composition::Composition &amp;composition, const partition::PartitionFunction &amp;partitionFunction, BuildDepthType buildDepth, NetworkConstructionFlags reactionTypes)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a00f8aafa14ae665d8e556b35a7934587">GraphEngine</a>(const reaction::ReactionSet &amp;reactions)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a147917aef40c3ec2751d742d3f862c70">involvesSpecies</a>(const fourdst::atomic::Species &amp;species) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad031cc7869394bd37c0bb65d86153469">isPrecomputationEnabled</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a07acc57c1015903ce3d1b0d0b7f09358">isStale</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a177a29cbdd8bae5a313cc391932a3cdd">isUsingReverseReactions</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a19305dc4affde99bb84056c9eeda9f1e">JacobianMatrixState</a> enum name</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac02ff3a8828e281209013f5c564083d0">m_atomicReverseRates</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a903c99fc607b3e36f434ec2070c7344d">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6c231f340fe4add5dce308a79cc0f136">involvesSpecies</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#adc9e6e5d8bab57ff2823ad01653cf9f5">isPrecomputationEnabled</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af61c53c080637d8d601c0def9942a901">isUsingReverseReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a19305dc4affde99bb84056c9eeda9f1e">JacobianMatrixState</a> enum name</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac02ff3a8828e281209013f5c564083d0">m_atomicReverseRates</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a83fa78621f43397373f35108f580abab">m_authoritativeADFun</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a77527b049b97b2611f5da5279780f5ec">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aab2701ed1d1262071072175647674b43">m_constants</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ae2fef545142356c7f2f2f5ae3cba6d90">m_depth</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a9087124f3e15614e76754a65d441ca08">m_epsADFun</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a636caa7f8085153424e17dc6e343a326">m_full_jacobian_sparsity_pattern</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af68112da3edc1a8c88289b8e7242180e">m_full_sparsity_set</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af794d0c7e7b78aebfbbf05381e3531a6">m_has_been_primed</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a636caa7f8085153424e17dc6e343a326">m_full_jacobian_sparsity_pattern</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af68112da3edc1a8c88289b8e7242180e">m_full_sparsity_set</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aac9f28dd58bc0d40a643885c95c2ab52">m_indexToSpeciesMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a81628fd98da5681396daab00ac573c6c">m_jac_work</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0a8d12341ecf52446faef9dd8c7dc81e">m_jacobianMatrixStateNameMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8a121839fe3a7a35e4214fd20e753f9f">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a544299e2495c6cac339b767e932e37b3">m_networkSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a3413c72ee010534a510160e38c3b2a0c">m_networkSpeciesMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a9f0e38be889a964d0b6e62934a1220db">m_partitionFunction</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6b4fe179421269045712cb417aa19eca">m_precomputedReactionIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a08deff0296d504a23056e6f0382dc664">m_precomputedReactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af7dab9063bb92aac64b6dfa755074739">m_reactionIDMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a249a9237865b0cf6906b360e4cb7c1ec">m_reactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aac2420a91b43e1a949a48768e6f3b4f2">m_rhsADFun</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0a8d12341ecf52446faef9dd8c7dc81e">m_jacobianMatrixStateNameMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8a121839fe3a7a35e4214fd20e753f9f">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a544299e2495c6cac339b767e932e37b3">m_networkSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a3413c72ee010534a510160e38c3b2a0c">m_networkSpeciesMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a9f0e38be889a964d0b6e62934a1220db">m_partitionFunction</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2f2e2c700288af48f6fe50a61bb86624">m_precomputed_reaction_index_map</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0afa15c074fa830e00d981c5786d3ac1">m_precomputed_reactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af7dab9063bb92aac64b6dfa755074739">m_reactionIDMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a249a9237865b0cf6906b360e4cb7c1ec">m_reactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a3e91570fbffc48748ad352e4554a728b">m_screeningModel</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#abdff5b7eeb73ed327ba6b758038ef776">m_screeningType</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a2421bbbdcc9fb02d9cb6e584da393c83">m_speciesToIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#abf6a17a17dbe9a33e3e33de91159f493">m_stoichiometryMatrix</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aadd0e4ba48fa8daaff3372cb5efa5dcb">m_store_intermediate_reaction_contributions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a1f4e11a70ce65d544e9800d552a65cc8">m_usePrecomputation</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac9a0d4d0eec32145bf8f2b688a1d988d">m_useReverseReactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a4fd4daf4f4ef658e7c0617223a74d824">m_weakRateInterpolator</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a915602acb18a69f34076bea401ffb49d">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6ccfb1813ce5b5c9568434f47e06726a">populateReactionIDMap</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a7e5c8d9b996e5bc7fc130d34dd196a4b">populateSpeciesToIndexMap</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac7814b9922c7fee4c5a2649127dcdadc">precomputeNetwork</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acc7f7fb7f0ef96135e7bda4bb532792e">primeEngine</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6c5245a27da1b45e10fb410518b79d4e">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a727ae752bcf5d6266a1cf3dedacf50fa">recordADTape</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a90251650123d0d8ce0281e18c4476f45">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0e0650a14247a7f43623d58de8eedb19">setPrecomputation</a>(bool precompute)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af842981deaf84a698b6cbfa66abcb715">setScreeningModel</a>(screening::ScreeningType model) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a959928abbef89fd0a20264ef8b79c111">setUseReverseReactions</a>(bool useReverse)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6ccfb1813ce5b5c9568434f47e06726a">populateReactionIDMap</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a7e5c8d9b996e5bc7fc130d34dd196a4b">populateSpeciesToIndexMap</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac7814b9922c7fee4c5a2649127dcdadc">precomputeNetwork</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab77179dadc7c41551f8eb4a3321283d4">primeEngine</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a58221a92813e13e43de48525980301d4">project</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af9cba639f9eeac0b746ef073670292e6">recordADTape</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac1958cc24ff3c69eac7b5b9e7bb6e510">set_store_intermediate_reaction_contributions</a>(const bool value)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a9af928bf8a5327d3cb45254c0e59f914">syncInternalMaps</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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@@ -237,47 +228,43 @@ Public Member Functions</h2></td></tr>
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+<tr class="separator:a0e484a5fcabc2ced4552e92078fcc03d"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 <tr class="memitem:a23187ad3ee504de46f59e1644c715c9f" id="r_a23187ad3ee504de46f59e1644c715c9f"><td class="memTemplParams" colspan="2">template&lt;IsArithmeticOrAD T&gt; </td></tr>
 <tr class="memitem:a23187ad3ee504de46f59e1644c715c9f"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; T &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#a23187ad3ee504de46f59e1644c715c9f">calculateAllDerivatives</a> (const std::vector&lt; T &gt; &amp;Y_in, const T T9, const T rho, const T Ye, const T mue, const std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; speciesLookup, const std::function&lt; bool(const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;)&gt; &amp;reactionLookup) const</td></tr>
 <tr class="separator:a23187ad3ee504de46f59e1644c715c9f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1engine_1_1_dynamic_engine')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td></tr>
+<tr class="memitem:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine" id="r_ac87099ff654ca30a8d8224f4779e1a15"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx) const</td></tr>
+<tr class="memdesc:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the set of inactive reactions in the network.  <br /></td></tr>
+<tr class="separator:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 <tr class="memitem:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine" id="r_af0ea99416c28933d364a872fc6aff556"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a> ()=default</td></tr>
 <tr class="memdesc:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
 <tr class="separator:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
-<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-static-methods" name="pub-static-methods"></a>
-Static Public Member Functions</h2></td></tr>
-<tr class="memitem:a663fd2bd0eda255bc242c1dc6338bc11" id="r_a663fd2bd0eda255bc242c1dc6338bc11"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; fourdst::atomic::Species, int &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a663fd2bd0eda255bc242c1dc6338bc11">getNetReactionStoichiometry</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;reaction)</td></tr>
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 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-types" name="pri-types"></a>
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@@ -301,18 +288,21 @@ Private Member Functions</h2></td></tr>
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 <tr class="memdesc:a7e5c8d9b996e5bc7fc130d34dd196a4b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Populates the species-to-index map.  <br /></td></tr>
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-<tr class="memitem:a727ae752bcf5d6266a1cf3dedacf50fa" id="r_a727ae752bcf5d6266a1cf3dedacf50fa"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a727ae752bcf5d6266a1cf3dedacf50fa">recordADTape</a> () const</td></tr>
-<tr class="memdesc:a727ae752bcf5d6266a1cf3dedacf50fa"><td class="mdescLeft">&#160;</td><td class="mdescRight">Records the AD tape for the right-hand side of the ODE.  <br /></td></tr>
-<tr class="separator:a727ae752bcf5d6266a1cf3dedacf50fa"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af9cba639f9eeac0b746ef073670292e6" id="r_af9cba639f9eeac0b746ef073670292e6"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af9cba639f9eeac0b746ef073670292e6">recordADTape</a> ()</td></tr>
+<tr class="memdesc:af9cba639f9eeac0b746ef073670292e6"><td class="mdescLeft">&#160;</td><td class="mdescRight">Records the AD tape for the right-hand side of the ODE.  <br /></td></tr>
+<tr class="separator:af9cba639f9eeac0b746ef073670292e6"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a5fadd1bb2692e1527ce24295c77cfc72" id="r_a5fadd1bb2692e1527ce24295c77cfc72"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5fadd1bb2692e1527ce24295c77cfc72">collectAtomicReverseRateAtomicBases</a> ()</td></tr>
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 <tr class="memitem:ac7814b9922c7fee4c5a2649127dcdadc" id="r_ac7814b9922c7fee4c5a2649127dcdadc"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac7814b9922c7fee4c5a2649127dcdadc">precomputeNetwork</a> ()</td></tr>
 <tr class="separator:ac7814b9922c7fee4c5a2649127dcdadc"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a87bf3a33fc21f7da2a26173ebdfa69f7"><td class="mdescLeft">&#160;</td><td class="mdescRight">Validates mass and charge conservation across all reactions.  <br /></td></tr>
-<tr class="separator:a87bf3a33fc21f7da2a26173ebdfa69f7"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="separator:abdd3ea788cbe3448b11969c7bbe09546"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ad6b75b38b3c67276ad5fe254a36bf8f6"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a698cbb0c4e0028924b116906787e342a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab5c4f7868ccd28fcf256e1e252c78517" id="r_ab5c4f7868ccd28fcf256e1e252c78517"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html">PrecomputationKernelResults</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab5c4f7868ccd28fcf256e1e252c78517">accumulate_flows_serial</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; double &gt; &amp;local_abundances, const std::vector&lt; double &gt; &amp;screening_factors, const std::vector&lt; double &gt; &amp;bare_rates, const std::vector&lt; double &gt; &amp;bare_reverse_rates, double rho, const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;activeReactions) const</td></tr>
+<tr class="separator:ab5c4f7868ccd28fcf256e1e252c78517"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ad3ab19d036a9f1484f527442b2dad958" id="r_ad3ab19d036a9f1484f527442b2dad958"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad3ab19d036a9f1484f527442b2dad958">calculateAllDerivativesUsingPrecomputation</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, const std::vector&lt; double &gt; &amp;bare_rates, const std::vector&lt; double &gt; &amp;bare_reverse_rates, double T9, double rho, const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;activeReactions) const</td></tr>
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 <tr class="memitem:aab80f2ab29ad9c7867e75e499148aa1f" id="r_aab80f2ab29ad9c7867e75e499148aa1f"><td class="memTemplParams" colspan="2">template&lt;IsArithmeticOrAD T&gt; </td></tr>
 <tr class="memitem:aab80f2ab29ad9c7867e75e499148aa1f"><td class="memTemplItemLeft" align="right" valign="top">T&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#aab80f2ab29ad9c7867e75e499148aa1f">calculateMolarReactionFlow</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;reaction, const std::vector&lt; T &gt; &amp;Y, T T9, T rho, T Ye, T mue, const std::function&lt; std::optional&lt; size_t &gt;(const fourdst::atomic::Species &amp;)&gt; &amp;speciesIDLookup) const</td></tr>
 <tr class="memdesc:aab80f2ab29ad9c7867e75e499148aa1f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculates the molar reaction flow for a given reaction.  <br /></td></tr>
@@ -329,8 +319,8 @@ Private Member Functions</h2></td></tr>
 Private Attributes</h2></td></tr>
 <tr class="memitem:a0a8d12341ecf52446faef9dd8c7dc81e" id="r_a0a8d12341ecf52446faef9dd8c7dc81e"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; <a class="el" href="#a19305dc4affde99bb84056c9eeda9f1e">JacobianMatrixState</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0a8d12341ecf52446faef9dd8c7dc81e">m_jacobianMatrixStateNameMap</a></td></tr>
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-<tr class="separator:a903c99fc607b3e36f434ec2070c7344d"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a0afa15c074fa830e00d981c5786d3ac1"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>A reaction network engine that uses a graph-based representation. </p>
@@ -592,6 +570,94 @@ Private Attributes</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
+<a id="ab5c4f7868ccd28fcf256e1e252c78517" name="ab5c4f7868ccd28fcf256e1e252c78517"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab5c4f7868ccd28fcf256e1e252c78517">&#9670;&#160;</a></span>accumulate_flows_serial()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html">GraphEngine::PrecomputationKernelResults</a> gridfire::engine::GraphEngine::accumulate_flows_serial </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>local_abundances</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>screening_factors</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>bare_rates</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>bare_reverse_rates</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>activeReactions</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a0dca83ce5226859b6b605889aca8ecc9" name="a0dca83ce5226859b6b605889aca8ecc9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0dca83ce5226859b6b605889aca8ecc9">&#9670;&#160;</a></span>addReaction() <span class="overload">[1/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::engine::GraphEngine::addReaction </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a6288b4006fb9d43dc4ef199f3b9f91fe" name="a6288b4006fb9d43dc4ef199f3b9f91fe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6288b4006fb9d43dc4ef199f3b9f91fe">&#9670;&#160;</a></span>addReaction() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::engine::GraphEngine::addReaction </td>
+          <td>(</td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction_id</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
 <a id="a23187ad3ee504de46f59e1644c715c9f" name="a23187ad3ee504de46f59e1644c715c9f"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#a23187ad3ee504de46f59e1644c715c9f">&#9670;&#160;</a></span>calculateAllDerivatives() <span class="overload">[1/2]</span></h2>
 
@@ -718,8 +784,8 @@ template&lt;IsArithmeticOrAD T&gt; </div>
 
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#abdd3ea788cbe3448b11969c7bbe09546">&#9670;&#160;</a></span>calculateAllDerivativesUsingPrecomputation()</h2>
+<a id="ad3ab19d036a9f1484f527442b2dad958" name="ad3ab19d036a9f1484f527442b2dad958"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad3ab19d036a9f1484f527442b2dad958">&#9670;&#160;</a></span>calculateAllDerivativesUsingPrecomputation()</h2>
 
 <div class="memitem">
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           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; gridfire::engine::GraphEngine::calculateAllDerivativesUsingPrecomputation </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -767,8 +838,8 @@ template&lt;IsArithmeticOrAD T&gt; </div>
 
 </div>
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#ac7e4624ed6eee72e7a8df42381d098bb">&#9670;&#160;</a></span>calculateEpsDerivatives() <span class="overload">[1/2]</span></h2>
+<a id="aa265b90b5ec153e1e71acb2d0e8fad36" name="aa265b90b5ec153e1e71acb2d0e8fad36"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa265b90b5ec153e1e71acb2d0e8fad36">&#9670;&#160;</a></span>calculateEpsDerivatives() <span class="overload">[1/2]</span></h2>
 
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@@ -779,6 +850,11 @@ template&lt;IsArithmeticOrAD T&gt; </div>
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           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -812,12 +888,12 @@ template&lt;IsArithmeticOrAD T&gt; </div>
 <p>This method computes the partial derivatives of the specific nuclear energy generation rate with respect to temperature (∂ε/∂T) and density (∂ε/∂ρ)</p>
 <dl class="section see"><dt>See also</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html" title="Structure holding derivatives of energy generation rate with respect to T and rho.">EnergyDerivatives</a> </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ada6a1295a92c2aede841672ecae0cede">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a3fd5d4f3c58d1790b7a517b5ef888eaf">gridfire::engine::DynamicEngine</a>.</p>
 
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+<a id="a00398599c658d7c0cebfd15f6465ea7d" name="a00398599c658d7c0cebfd15f6465ea7d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a00398599c658d7c0cebfd15f6465ea7d">&#9670;&#160;</a></span>calculateEpsDerivatives() <span class="overload">[2/2]</span></h2>
 
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@@ -828,6 +904,11 @@ template&lt;IsArithmeticOrAD T&gt; </div>
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           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -867,64 +948,10 @@ template&lt;IsArithmeticOrAD T&gt; </div>
 <p>This method computes the partial derivatives of the specific nuclear energy generation rate with respect to temperature (∂ε/∂T) and density (∂ε/∂ρ) considering only the specified subset of reactions. This allows for flexible calculations with different reaction sets without modifying the engine's internal state.</p>
 <dl class="section see"><dt>See also</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html" title="Structure holding derivatives of energy generation rate with respect to T and rho.">EnergyDerivatives</a> </dd></dl>
 
-</div>
-</div>
-<a id="aaff9cdc04ca01e7c927d36476bcf5da4" name="aaff9cdc04ca01e7c927d36476bcf5da4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aaff9cdc04ca01e7c927d36476bcf5da4">&#9670;&#160;</a></span>calculateMolarReactionFlow() <span class="overload">[1/2]</span></h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">double gridfire::engine::GraphEngine::calculateMolarReactionFlow </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Calculates the molar reaction flow for a given reaction. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">reaction</td><td>The reaction for which to calculate the flow. </td></tr>
-    <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
-    <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
-    <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>Molar flow rate for the reaction (e.g., mol/g/s).</dd></dl>
-<p>This method computes the net rate at which the given reaction proceeds under the current state. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa57fa5e58b98a03fba31bcddda8001d4">gridfire::engine::DynamicEngine</a>.</p>
-
 </div>
 </div>
 <a id="aab80f2ab29ad9c7867e75e499148aa1f" name="aab80f2ab29ad9c7867e75e499148aa1f"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aab80f2ab29ad9c7867e75e499148aa1f">&#9670;&#160;</a></span>calculateMolarReactionFlow() <span class="overload">[2/2]</span></h2>
+<h2 class="memtitle"><span class="permalink"><a href="#aab80f2ab29ad9c7867e75e499148aa1f">&#9670;&#160;</a></span>calculateMolarReactionFlow() <span class="overload">[1/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -999,6 +1026,65 @@ template&lt;IsArithmeticOrAD T&gt; </div>
 <dl class="section return"><dt>Returns</dt><dd>Molar flow rate for the reaction (e.g., mol/g/s).</dd></dl>
 <p>This method computes the net rate at which the given reaction proceeds under the current state. </p>
 
+</div>
+</div>
+<a id="a154eda68e5df7f45b0e59b17761177b3" name="a154eda68e5df7f45b0e59b17761177b3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a154eda68e5df7f45b0e59b17761177b3">&#9670;&#160;</a></span>calculateMolarReactionFlow() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::engine::GraphEngine::calculateMolarReactionFlow </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Calculates the molar reaction flow for a given reaction. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">reaction</td><td>The reaction for which to calculate the flow. </td></tr>
+    <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
+    <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
+    <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>Molar flow rate for the reaction (e.g., mol/g/s).</dd></dl>
+<p>This method computes the net rate at which the given reaction proceeds under the current state. </p>
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#abf0f13b9eae66da6119e6fca826379e8">gridfire::engine::DynamicEngine</a>.</p>
+
 </div>
 </div>
 <a id="a2e7012382ee44473478ebc37ac36695c" name="a2e7012382ee44473478ebc37ac36695c"></a>
@@ -1214,8 +1300,8 @@ template&lt;IsArithmeticOrAD T&gt; </div>
 
 </div>
 </div>
-<a id="aee098a65f5cecded199d2c00422b398d" name="aee098a65f5cecded199d2c00422b398d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aee098a65f5cecded199d2c00422b398d">&#9670;&#160;</a></span>calculateRHSAndEnergy() <span class="overload">[1/2]</span></h2>
+<a id="a474ba2ca2d24cb90ee73af042993dd14" name="a474ba2ca2d24cb90ee73af042993dd14"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a474ba2ca2d24cb90ee73af042993dd14">&#9670;&#160;</a></span>calculateRHSAndEnergy() <span class="overload">[1/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1226,6 +1312,11 @@ template&lt;IsArithmeticOrAD T&gt; </div>
         <tr>
           <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::GraphEngine::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1236,7 +1327,12 @@ template&lt;IsArithmeticOrAD T&gt; </div>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1252,19 +1348,20 @@ template&lt;IsArithmeticOrAD T&gt; </div>
     <tr><td class="paramname">comp</td><td>Composition object containing current abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td></td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html" title="Structure holding derivatives and energy generation for a network step.">StepDerivatives&lt;double&gt;</a> containing dY/dt and energy generation rate.</dd></dl>
+<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives&lt;double&gt;</a> containing dY/dt and energy generation rate.</dd></dl>
 <p>This method calculates the time derivatives of all species and the specific nuclear energy generation rate for the current state.</p>
 <dl class="section see"><dt>See also</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html" title="Structure holding derivatives and energy generation for a network step.">StepDerivatives</a> </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>.</p>
 
 </div>
 </div>
-<a id="ac77d4150b3b070a095fb65346968e51b" name="ac77d4150b3b070a095fb65346968e51b"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac77d4150b3b070a095fb65346968e51b">&#9670;&#160;</a></span>calculateRHSAndEnergy() <span class="overload">[2/2]</span></h2>
+<a id="a7bd6fbf8bc5256a3437ea2731fadf4e4" name="a7bd6fbf8bc5256a3437ea2731fadf4e4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7bd6fbf8bc5256a3437ea2731fadf4e4">&#9670;&#160;</a></span>calculateRHSAndEnergy() <span class="overload">[2/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1275,6 +1372,11 @@ template&lt;IsArithmeticOrAD T&gt; </div>
         <tr>
           <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::GraphEngine::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1310,7 +1412,7 @@ template&lt;IsArithmeticOrAD T&gt; </div>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html" title="Structure holding derivatives and energy generation for a network step.">StepDerivatives&lt;double&gt;</a> containing dY/dt and energy generation rate.</dd></dl>
+<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives&lt;double&gt;</a> containing dY/dt and energy generation rate.</dd></dl>
 <p>This method calculates the time derivatives of all species and the specific nuclear energy generation rate considering only the specified subset of reactions. This allows for flexible calculations with different reaction sets without modifying the engine's internal state.</p>
 <dl class="section see"><dt>See also</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html" title="Structure holding derivatives and energy generation for a network step.">StepDerivatives</a> </dd></dl>
 
@@ -1341,8 +1443,8 @@ template&lt;IsArithmeticOrAD T&gt; </div>
 
 </div>
 </div>
-<a id="ae9d4d99c791876c012697fe5a0ba06c8" name="ae9d4d99c791876c012697fe5a0ba06c8"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ae9d4d99c791876c012697fe5a0ba06c8">&#9670;&#160;</a></span>collectComposition()</h2>
+<a id="a1c977a772eedae1cceeb6b50d984fde4" name="a1c977a772eedae1cceeb6b50d984fde4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1c977a772eedae1cceeb6b50d984fde4">&#9670;&#160;</a></span>collectComposition()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1353,6 +1455,11 @@ template&lt;IsArithmeticOrAD T&gt; </div>
         <tr>
           <td class="memname">fourdst::composition::Composition gridfire::engine::GraphEngine::collectComposition </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1395,7 +1502,7 @@ If a species is in the input comp but not in the network </dd></dl>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a41877719ae5e8de53c1692c7cf9bfbfc">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
@@ -1427,8 +1534,138 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="a2c0c50ba51537a2f565183e2f47eef69" name="a2c0c50ba51537a2f565183e2f47eef69"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2c0c50ba51537a2f565183e2f47eef69">&#9670;&#160;</a></span>exportToCSV()</h2>
+<a id="a698cbb0c4e0028924b116906787e342a" name="a698cbb0c4e0028924b116906787e342a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a698cbb0c4e0028924b116906787e342a">&#9670;&#160;</a></span>compute_neutrino_fluxes()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::pair&lt; double, double &gt; gridfire::engine::GraphEngine::compute_neutrino_fluxes </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>netFlow</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ad6b75b38b3c67276ad5fe254a36bf8f6" name="ad6b75b38b3c67276ad5fe254a36bf8f6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad6b75b38b3c67276ad5fe254a36bf8f6">&#9670;&#160;</a></span>compute_reaction_flow()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::engine::GraphEngine::compute_reaction_flow </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>local_abundances</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>screening_factors</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>bare_rates</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>bare_reverse_rates</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>reactionCounter</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>reactionIndex</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html">PrecomputedReaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>precomputedReaction</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="acfe338ed3b10a4f116e58b2693a7fe10" name="acfe338ed3b10a4f116e58b2693a7fe10"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acfe338ed3b10a4f116e58b2693a7fe10">&#9670;&#160;</a></span>constructStateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &gt; gridfire::engine::GraphEngine::constructStateBlob </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> *</td>          <td class="paramname"><span class="paramname"><em>blob</em></span><span class="paramdefsep"> = </span><span class="paramdefval">nullptr</span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="adab81a7a56e2d9fd1ca46c20bf971912" name="adab81a7a56e2d9fd1ca46c20bf971912"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adab81a7a56e2d9fd1ca46c20bf971912">&#9670;&#160;</a></span>exportToCSV()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1436,8 +1673,12 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">void gridfire::engine::GraphEngine::exportToCSV </td>
           <td>(</td>
-          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span>&#160;) const</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -1457,12 +1698,12 @@ If a species is in the input comp but not in the network </dd></dl>
   </dd>
 </dl>
 <p>Example usage: </p><div class="fragment"><div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>.exportToCSV(<span class="stringliteral">&quot;network.csv&quot;</span>);</div>
-<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:38</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
 </div><!-- fragment --> 
 </div>
 </div>
-<a id="a77d9755e68c81279316c96e6bb160ee4" name="a77d9755e68c81279316c96e6bb160ee4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a77d9755e68c81279316c96e6bb160ee4">&#9670;&#160;</a></span>exportToDot()</h2>
+<a id="ac5f6bbc54d65a974dce4ad407617779a" name="ac5f6bbc54d65a974dce4ad407617779a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac5f6bbc54d65a974dce4ad407617779a">&#9670;&#160;</a></span>exportToDot()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1470,8 +1711,12 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">void gridfire::engine::GraphEngine::exportToDot </td>
           <td>(</td>
-          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span>&#160;) const</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -1494,8 +1739,25 @@ If a species is in the input comp but not in the network </dd></dl>
 </div><!-- fragment --> 
 </div>
 </div>
-<a id="a9ca013f203d7a3ef9d1b9ee4b2982cb0" name="a9ca013f203d7a3ef9d1b9ee4b2982cb0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a9ca013f203d7a3ef9d1b9ee4b2982cb0">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
+<a id="acaef2178b6bd13ee478a9aa03bd12da9" name="acaef2178b6bd13ee478a9aa03bd12da9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acaef2178b6bd13ee478a9aa03bd12da9">&#9670;&#160;</a></span>generate_jacobian_sparsity_pattern()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::engine::GraphEngine::generate_jacobian_sparsity_pattern </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ab7efbe72c39d2828eeed4e20f319a2c8" name="ab7efbe72c39d2828eeed4e20f319a2c8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab7efbe72c39d2828eeed4e20f319a2c8">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1506,6 +1768,11 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::GraphEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1538,12 +1805,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <p>This method computes and stores the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state using automatic differentiation. The matrix can then be accessed via <code>getJacobianMatrixEntry()</code>.</p>
 <dl class="section see"><dt>See also</dt><dd>getJacobianMatrixEntry() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a53276f09346b531f8676db355e1219eb">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab6d95491f017feb4c43d9fa05739fcd0">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="ac4f9cd4e2304f681dd9af0f7b751cb81" name="ac4f9cd4e2304f681dd9af0f7b751cb81"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac4f9cd4e2304f681dd9af0f7b751cb81">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
+<a id="a7704e02c04de922ae6b01f4ba2b88148" name="a7704e02c04de922ae6b01f4ba2b88148"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7704e02c04de922ae6b01f4ba2b88148">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1554,6 +1821,11 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::GraphEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1592,12 +1864,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <p>This method computes and stores the Jacobian matrix (∂(dY/dt)_i/∂Y_j) for the current state using automatic differentiation, taking into account the provided sparsity pattern. The matrix can then be accessed via <code>getJacobianMatrixEntry()</code>.</p>
 <dl class="section see"><dt>See also</dt><dd>getJacobianMatrixEntry() </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a51d55a21be28e372021b2b8e5ecdc551">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a78f7b315bfa0a1f34d8fd5ab652b6934">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="acc28ff627d46d8d4066a1acf830cbe27" name="acc28ff627d46d8d4066a1acf830cbe27"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#acc28ff627d46d8d4066a1acf830cbe27">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
+<a id="a72130974401a22155dfd9a2e68192d56" name="a72130974401a22155dfd9a2e68192d56"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a72130974401a22155dfd9a2e68192d56">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1608,6 +1880,11 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::GraphEngine::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1645,14 +1922,14 @@ If a species is in the input comp but not in the network </dd></dl>
 </dl>
 <dl class="section see"><dt>See also</dt><dd>getJacobianMatrixEntry() </dd>
 <dd>
-<a class="el" href="#a9ca013f203d7a3ef9d1b9ee4b2982cb0" title="Generates the Jacobian matrix for the current state.">generateJacobianMatrix()</a> </dd></dl>
+<a class="el" href="#ab7efbe72c39d2828eeed4e20f319a2c8" title="Generates the Jacobian matrix for the current state.">generateJacobianMatrix()</a> </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a15d53dac8b622a3b7d0f928a3995dbde">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a983551b5fef4610799c062cb5be2b1c7">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a2221feee40542efa1c07f01225bd3828" name="a2221feee40542efa1c07f01225bd3828"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2221feee40542efa1c07f01225bd3828">&#9670;&#160;</a></span>generateStoichiometryMatrix()</h2>
+<a id="a769ac1cbf84d20afe66598aa325e7f7c" name="a769ac1cbf84d20afe66598aa325e7f7c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a769ac1cbf84d20afe66598aa325e7f7c">&#9670;&#160;</a></span>get_store_intermediate_reaction_contributions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1661,28 +1938,23 @@ If a species is in the input comp but not in the network </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">void gridfire::engine::GraphEngine::generateStoichiometryMatrix </td>
+          <td class="memname">bool gridfire::engine::GraphEngine::get_store_intermediate_reaction_contributions </td>
           <td>(</td>
           <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td></td>
+          <td> const</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Generates the stoichiometry matrix for the network. </p>
-<p>This method computes and stores the stoichiometry matrix, which encodes the net change of each species in each reaction. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5e2c45a3e415b53e41def8f743f93464">gridfire::engine::DynamicEngine</a>.</p>
-
 </div>
 </div>
-<a id="ab29d6c4a7c789cf3d75767833c80c658" name="ab29d6c4a7c789cf3d75767833c80c658"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ab29d6c4a7c789cf3d75767833c80c658">&#9670;&#160;</a></span>getDepth()</h2>
+<a id="a0faf9ad41f916c09e65d58890a854248" name="a0faf9ad41f916c09e65d58890a854248"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0faf9ad41f916c09e65d58890a854248">&#9670;&#160;</a></span>getAuthoritativeADFun()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1691,7 +1963,7 @@ If a species is in the input comp but not in the network </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">BuildDepthType</a> gridfire::engine::GraphEngine::getDepth </td>
+          <td class="memname">const CppAD::ADFun&lt; double &gt; &amp; gridfire::engine::GraphEngine::getAuthoritativeADFun </td>
           <td>(</td>
           <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
           <td> const</td>
@@ -1699,55 +1971,42 @@ If a species is in the input comp but not in the network </dd></dl>
       </table>
   </td>
   <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a0e484a5fcabc2ced4552e92078fcc03d" name="a0e484a5fcabc2ced4552e92078fcc03d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0e484a5fcabc2ced4552e92078fcc03d">&#9670;&#160;</a></span>getMostRecentRHSCalculation()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt; gridfire::engine::GraphEngine::getMostRecentRHSCalculation </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
 <span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Gets the depth of the network. </p>
-<dl class="section return"><dt>Returns</dt><dd>The build depth of the network.</dd></dl>
-<p>This method returns the current build depth of the reaction network, which indicates how many levels of reactions are included in the network. </p>
-
-<p>Reimplemented from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac5a0def6b6af0bd93bf9057c25f048ff">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30cc7809d53540bd3407d971de8eec48">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a663fd2bd0eda255bc242c1dc6338bc11" name="a663fd2bd0eda255bc242c1dc6338bc11"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a663fd2bd0eda255bc242c1dc6338bc11">&#9670;&#160;</a></span>getNetReactionStoichiometry()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">std::unordered_map&lt; fourdst::atomic::Species, int &gt; gridfire::engine::GraphEngine::getNetReactionStoichiometry </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Gets the net stoichiometry for a given reaction. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">reaction</td><td>The reaction for which to get the stoichiometry. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>Map of species to their stoichiometric coefficients. </dd></dl>
-
-</div>
-</div>
-<a id="a749cc482a707cb3a38bdd5de894716e2" name="a749cc482a707cb3a38bdd5de894716e2"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a749cc482a707cb3a38bdd5de894716e2">&#9670;&#160;</a></span>getNetworkReactions()</h2>
+<a id="a90e87465ba1e80af7124c0e4614d433b" name="a90e87465ba1e80af7124c0e4614d433b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a90e87465ba1e80af7124c0e4614d433b">&#9670;&#160;</a></span>getNetworkReactions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1758,7 +2017,7 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp; gridfire::engine::GraphEngine::getNetworkReactions </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1772,12 +2031,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <p>Gets the set of logical reactions in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>Reference to the LogicalReactionSet containing all reactions. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a26b59a4c7622bf820c0eeec6a7522aa8">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a77a889cbc3791beca4abb95cb663a4d6">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a8f5099bfda5f6d6e1494788beff9b7c8" name="a8f5099bfda5f6d6e1494788beff9b7c8"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8f5099bfda5f6d6e1494788beff9b7c8">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
+<a id="a6b7e2d8391114f25d74d986d919715c9" name="a6b7e2d8391114f25d74d986d919715c9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6b7e2d8391114f25d74d986d919715c9">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
 
 <div class="memitem">
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@@ -1788,7 +2047,7 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">const std::vector&lt; fourdst::atomic::Species &gt; &amp; gridfire::engine::GraphEngine::getNetworkSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1802,12 +2061,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <p>Gets the list of species in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>Vector of Species objects representing all network species. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">gridfire::engine::Engine</a>.</p>
 
 </div>
 </div>
-<a id="a4247cf6a551a7cbc951a733d3c31c325" name="a4247cf6a551a7cbc951a733d3c31c325"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a4247cf6a551a7cbc951a733d3c31c325">&#9670;&#160;</a></span>getPartitionFunction()</h2>
+<a id="a3ef1320e4fb1160d37f93e3eefd38c50" name="a3ef1320e4fb1160d37f93e3eefd38c50"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3ef1320e4fb1160d37f93e3eefd38c50">&#9670;&#160;</a></span>getPartitionFunction()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1818,7 +2077,7 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">const <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html">partition::PartitionFunction</a> &amp; gridfire::engine::GraphEngine::getPartitionFunction </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1835,8 +2094,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="a62c6f3bebe931bcd412fb492deb634a5" name="a62c6f3bebe931bcd412fb492deb634a5"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a62c6f3bebe931bcd412fb492deb634a5">&#9670;&#160;</a></span>getScreeningModel()</h2>
+<a id="a69b478b15844d145219c9c5a4e515e59" name="a69b478b15844d145219c9c5a4e515e59"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a69b478b15844d145219c9c5a4e515e59">&#9670;&#160;</a></span>getScreeningModel()</h2>
 
 <div class="memitem">
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@@ -1847,7 +2106,7 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a> gridfire::engine::GraphEngine::getScreeningModel </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1863,12 +2122,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <p>Example usage: </p><div class="fragment"><div class="line"><a class="code hl_enumeration" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a> currentModel = <a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>.getScreeningModel();</div>
 <div class="ttc" id="anamespacegridfire_1_1screening_html_aa82aafbc4f8c28d0a75b60798e3a7d25"><div class="ttname"><a href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">gridfire::screening::ScreeningType</a></div><div class="ttdeci">ScreeningType</div><div class="ttdoc">Enumerates the available plasma screening models.</div><div class="ttdef"><b>Definition</b> screening_types.h:15</div></div>
 </div><!-- fragment --> 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a24103027a38e02d4342161164554d332">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a60834e4bcfb2e4ec21a9cbf7bb9f7363">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="ae026bc87dc8b24fd78d412ac7e58b148" name="ae026bc87dc8b24fd78d412ac7e58b148"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ae026bc87dc8b24fd78d412ac7e58b148">&#9670;&#160;</a></span>getSpeciesDestructionTimescales() <span class="overload">[1/2]</span></h2>
+<a id="a32ab9175e93ae29f87b0903400cb3521" name="a32ab9175e93ae29f87b0903400cb3521"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a32ab9175e93ae29f87b0903400cb3521">&#9670;&#160;</a></span>getSpeciesDestructionTimescales() <span class="overload">[1/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1879,6 +2138,11 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::GraphEngine::getSpeciesDestructionTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1911,12 +2175,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <dl class="section return"><dt>Returns</dt><dd>Map from Species to their destruction timescales (s).</dd></dl>
 <p>This method estimates the destruction timescale for each species, which can be useful for understanding reaction flows and equilibrium states. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aefc5d0f7842b27a108ba1e4ca346e9a0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a128dd0a7f738f93092c437eeda983fdf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a0ea1eedfd79ccbd3d44241eadd65065b" name="a0ea1eedfd79ccbd3d44241eadd65065b"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a0ea1eedfd79ccbd3d44241eadd65065b">&#9670;&#160;</a></span>getSpeciesDestructionTimescales() <span class="overload">[2/2]</span></h2>
+<a id="ae2a9f08ef597884e61a7d8e53c23ef17" name="ae2a9f08ef597884e61a7d8e53c23ef17"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae2a9f08ef597884e61a7d8e53c23ef17">&#9670;&#160;</a></span>getSpeciesDestructionTimescales() <span class="overload">[2/2]</span></h2>
 
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@@ -1927,6 +2191,11 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::GraphEngine::getSpeciesDestructionTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1967,8 +2236,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="ad67b0022cc783e63ae1954a04c4a68e1" name="ad67b0022cc783e63ae1954a04c4a68e1"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad67b0022cc783e63ae1954a04c4a68e1">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
+<a id="a4d339f84e5f44af004b14d69ce10ee21" name="a4d339f84e5f44af004b14d69ce10ee21"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4d339f84e5f44af004b14d69ce10ee21">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
 
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@@ -1979,8 +2248,12 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">size_t gridfire::engine::GraphEngine::getSpeciesIndex </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -2000,12 +2273,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <dl class="section return"><dt>Returns</dt><dd>Index of the species in the network, or -1 if not found.</dd></dl>
 <p>This method returns the index of the given species in the network's species vector. If the species is not found, it returns -1. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac0f40017603e8e6887b75dc7360d7c5e">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a16bd2fae51fa738da62f2a767f6875d2">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="afe93df16c69e7e10658c82874759dd2f" name="afe93df16c69e7e10658c82874759dd2f"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#afe93df16c69e7e10658c82874759dd2f">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
+<a id="a763332410f64d2492785d2053bdad5fe" name="a763332410f64d2492785d2053bdad5fe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a763332410f64d2492785d2053bdad5fe">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
 
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@@ -2016,8 +2289,12 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a> gridfire::engine::GraphEngine::getSpeciesStatus </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -2037,12 +2314,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <dl class="section return"><dt>Returns</dt><dd><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a> indicating the status of the species.</dd></dl>
 <p>This method checks if the given species is part of the network and returns its status (e.g., Active, Inactive, NotFound). </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8aebefad50c1aa34207e118e92d7ccf0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a1fefd34491959f9936b7a065fc2d6274">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="a3c9b57d2842b6b5535313be845ca6175" name="a3c9b57d2842b6b5535313be845ca6175"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a3c9b57d2842b6b5535313be845ca6175">&#9670;&#160;</a></span>getSpeciesTimescales() <span class="overload">[1/2]</span></h2>
+<a id="a88ee4feaa851d047d110cd0949ed845f" name="a88ee4feaa851d047d110cd0949ed845f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a88ee4feaa851d047d110cd0949ed845f">&#9670;&#160;</a></span>getSpeciesTimescales() <span class="overload">[1/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2053,6 +2330,11 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::GraphEngine::getSpeciesTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -2085,12 +2367,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <dl class="section return"><dt>Returns</dt><dd>Map from Species to their characteristic timescales (s).</dd></dl>
 <p>This method estimates the timescale for abundance change of each species, which can be used for timestep control or diagnostics. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aef6ed91d922c0b1733fd7835e99d0efe">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a92be21f072b61fcf291559246045801f">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a2f196db621e81082430be117c72fa9d0" name="a2f196db621e81082430be117c72fa9d0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2f196db621e81082430be117c72fa9d0">&#9670;&#160;</a></span>getSpeciesTimescales() <span class="overload">[2/2]</span></h2>
+<a id="a39d800c17b054f10a47100b552364902" name="a39d800c17b054f10a47100b552364902"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a39d800c17b054f10a47100b552364902">&#9670;&#160;</a></span>getSpeciesTimescales() <span class="overload">[2/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2101,6 +2383,11 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; fourdst::atomic::Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::GraphEngine::getSpeciesTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -2141,51 +2428,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="aec867f0b43e74c8157f7d5085b55bb96" name="aec867f0b43e74c8157f7d5085b55bb96"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aec867f0b43e74c8157f7d5085b55bb96">&#9670;&#160;</a></span>getStoichiometryMatrixEntry()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">int gridfire::engine::GraphEngine::getStoichiometryMatrixEntry </td>
-          <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Gets an entry from the stoichiometry matrix. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">species</td><td>Species to look up stoichiometry for. </td></tr>
-    <tr><td class="paramname">reaction</td><td><a class="el" href="classgridfire_1_1engine_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> to find. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>Stoichiometric coefficient for the species in the reaction.</dd></dl>
-<p>The stoichiometry matrix must have been generated by <code><a class="el" href="#a2221feee40542efa1c07f01225bd3828" title="Generates the stoichiometry matrix for the network.">generateStoichiometryMatrix()</a></code>.</p>
-<dl class="section see"><dt>See also</dt><dd><a class="el" href="#a2221feee40542efa1c07f01225bd3828" title="Generates the stoichiometry matrix for the network.">generateStoichiometryMatrix()</a> </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a147917aef40c3ec2751d742d3f862c70" name="a147917aef40c3ec2751d742d3f862c70"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a147917aef40c3ec2751d742d3f862c70">&#9670;&#160;</a></span>involvesSpecies()</h2>
+<a id="a6c231f340fe4add5dce308a79cc0f136" name="a6c231f340fe4add5dce308a79cc0f136"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6c231f340fe4add5dce308a79cc0f136">&#9670;&#160;</a></span>involvesSpecies()</h2>
 
 <div class="memitem">
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@@ -2196,8 +2440,12 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">bool gridfire::engine::GraphEngine::involvesSpecies </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -2218,8 +2466,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="ad031cc7869394bd37c0bb65d86153469" name="ad031cc7869394bd37c0bb65d86153469"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad031cc7869394bd37c0bb65d86153469">&#9670;&#160;</a></span>isPrecomputationEnabled()</h2>
+<a id="adc9e6e5d8bab57ff2823ad01653cf9f5" name="adc9e6e5d8bab57ff2823ad01653cf9f5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adc9e6e5d8bab57ff2823ad01653cf9f5">&#9670;&#160;</a></span>isPrecomputationEnabled()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2230,7 +2478,7 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">bool gridfire::engine::GraphEngine::isPrecomputationEnabled </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -2247,45 +2495,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="a07acc57c1015903ce3d1b0d0b7f09358" name="a07acc57c1015903ce3d1b0d0b7f09358"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a07acc57c1015903ce3d1b0d0b7f09358">&#9670;&#160;</a></span>isStale()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">bool gridfire::engine::GraphEngine::isStale </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Checks if the engine view is stale and needs to be updated. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The current network input (unused). </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>True if the view is stale, false otherwise.</dd></dl>
-<dl class="deprecated"><dt><b><a class="el" href="deprecated.html#_deprecated000001">Deprecated</a></b></dt><dd>This method is deprecated and will be removed in future versions. Stale states are returned as part of the results of methods that require the ability to report them. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a79423b9f67b4cac702547b4f1d8bd14c">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a177a29cbdd8bae5a313cc391932a3cdd" name="a177a29cbdd8bae5a313cc391932a3cdd"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a177a29cbdd8bae5a313cc391932a3cdd">&#9670;&#160;</a></span>isUsingReverseReactions()</h2>
+<a id="af61c53c080637d8d601c0def9942a901" name="af61c53c080637d8d601c0def9942a901"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af61c53c080637d8d601c0def9942a901">&#9670;&#160;</a></span>isUsingReverseReactions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2296,7 +2507,7 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname">bool gridfire::engine::GraphEngine::isUsingReverseReactions </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -2311,43 +2522,6 @@ If a species is in the input comp but not in the network </dd></dl>
 <dl class="section return"><dt>Returns</dt><dd>True if reverse reactions are enabled, false otherwise.</dd></dl>
 <p>This method allows checking whether the engine is configured to use reverse reactions in its calculations. </p>
 
-</div>
-</div>
-<a id="a915602acb18a69f34076bea401ffb49d" name="a915602acb18a69f34076bea401ffb49d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a915602acb18a69f34076bea401ffb49d">&#9670;&#160;</a></span>mapNetInToMolarAbundanceVector()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">std::vector&lt; double &gt; gridfire::engine::GraphEngine::mapNetInToMolarAbundanceVector </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Maps the <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> object to a vector of molar abundances. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> object containing the input conditions. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>Vector of molar abundances corresponding to the species in the network.</dd></dl>
-<p>This method converts the <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> object into a vector of molar abundances for each species in the network, which can be used for further calculations. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa9d55b81c1963113aad86aa60c19676f">gridfire::engine::DynamicEngine</a>.</p>
-
 </div>
 </div>
 <a id="a6ccfb1813ce5b5c9568434f47e06726a" name="a6ccfb1813ce5b5c9568434f47e06726a"></a>
@@ -2431,8 +2605,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="acc7f7fb7f0ef96135e7bda4bb532792e" name="acc7f7fb7f0ef96135e7bda4bb532792e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#acc7f7fb7f0ef96135e7bda4bb532792e">&#9670;&#160;</a></span>primeEngine()</h2>
+<a id="ab77179dadc7c41551f8eb4a3321283d4" name="ab77179dadc7c41551f8eb4a3321283d4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab77179dadc7c41551f8eb4a3321283d4">&#9670;&#160;</a></span>primeEngine()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2443,8 +2617,12 @@ If a species is in the input comp but not in the network </dd></dl>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a> gridfire::engine::GraphEngine::primeEngine </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -2464,12 +2642,12 @@ If a species is in the input comp but not in the network </dd></dl>
 <dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" title="Captures the result of a network priming operation.">PrimingReport</a> containing information about the priming process.</dd></dl>
 <p>This method initializes the engine with the provided input conditions, setting up reactions, species, and precomputing necessary data. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a70e270bb50910c0055a75575c1ef1e95">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30df09678c3de1a55b7c6ac5eae35004">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a6c5245a27da1b45e10fb410518b79d4e" name="a6c5245a27da1b45e10fb410518b79d4e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6c5245a27da1b45e10fb410518b79d4e">&#9670;&#160;</a></span>rebuild()</h2>
+<a id="a58221a92813e13e43de48525980301d4" name="a58221a92813e13e43de48525980301d4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a58221a92813e13e43de48525980301d4">&#9670;&#160;</a></span>project()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2478,14 +2656,14 @@ If a species is in the input comp but not in the network </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">void gridfire::engine::GraphEngine::rebuild </td>
+          <td class="memname">fourdst::composition::Composition gridfire::engine::GraphEngine::project </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">BuildDepthType</a></td>          <td class="paramname"><span class="paramname"><em>depth</em></span>&#160;)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -2495,22 +2673,22 @@ If a species is in the input comp but not in the network </dd></dl>
 </table>
 </div><div class="memdoc">
 
-<p>Rebuilds the reaction network based on a new composition. </p>
+<p>Updates the state of the network and the composition to be usable for the current network. </p>
+<p>For graph engine all this does is ensure that the returned composition has all the species in the network registered. if a species was already in the composition is will keep its abundance, otherwise it will be added with zero abundance.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">comp</td><td>The new composition to use for rebuilding the network. </td></tr>
-    <tr><td class="paramname">depth</td><td>The build depth to use for the network.</td></tr>
+    <tr><td class="paramname">netIn</td><td>The input netIn to use, this includes the composition, temperature, and density</td></tr>
   </table>
   </dd>
 </dl>
-<p>This method rebuilds the reaction network using the provided composition and build depth. It updates all internal data structures accordingly. </p>
+<dl class="section return"><dt>Returns</dt><dd>The updated composition that includes all species in the network. </dd></dl>
 
-<p>Reimplemented from <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a260d36cc1e14ca8eda0309745e9134d9">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a727ae752bcf5d6266a1cf3dedacf50fa" name="a727ae752bcf5d6266a1cf3dedacf50fa"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a727ae752bcf5d6266a1cf3dedacf50fa">&#9670;&#160;</a></span>recordADTape()</h2>
+<a id="af9cba639f9eeac0b746ef073670292e6" name="af9cba639f9eeac0b746ef073670292e6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af9cba639f9eeac0b746ef073670292e6">&#9670;&#160;</a></span>recordADTape()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2522,7 +2700,7 @@ If a species is in the input comp but not in the network </dd></dl>
           <td class="memname">void gridfire::engine::GraphEngine::recordADTape </td>
           <td>(</td>
           <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td> const</td>
+          <td></td>
         </tr>
       </table>
   </td>
@@ -2543,8 +2721,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
 </div>
-<a id="a90251650123d0d8ce0281e18c4476f45" name="a90251650123d0d8ce0281e18c4476f45"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a90251650123d0d8ce0281e18c4476f45">&#9670;&#160;</a></span>setNetworkReactions()</h2>
+<a id="ac1958cc24ff3c69eac7b5b9e7bb6e510" name="ac1958cc24ff3c69eac7b5b9e7bb6e510"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac1958cc24ff3c69eac7b5b9e7bb6e510">&#9670;&#160;</a></span>set_store_intermediate_reaction_contributions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -2553,120 +2731,19 @@ If a species is in the input comp but not in the network </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">void gridfire::engine::GraphEngine::setNetworkReactions </td>
+          <td class="memname">void gridfire::engine::GraphEngine::set_store_intermediate_reaction_contributions </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
+          <td class="paramtype">const bool</td>          <td class="paramname"><span class="paramname"><em>value</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Sets the reactions for the network. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">reactions</td><td>The set of reactions to use in the network.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method replaces the current set of reactions in the network with the provided set. It marks the engine as stale, requiring regeneration of matrices and recalculation of rates. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab321170954bffc53b1bedaf54f6976be">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a0e0650a14247a7f43623d58de8eedb19" name="a0e0650a14247a7f43623d58de8eedb19"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a0e0650a14247a7f43623d58de8eedb19">&#9670;&#160;</a></span>setPrecomputation()</h2>
-
-<div class="memitem">
-<div class="memproto">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::GraphEngine::setPrecomputation </td>
-          <td>(</td>
-          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>precompute</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-</div><div class="memdoc">
-
-<p>Sets whether to precompute reaction rates. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">precompute</td><td>True to enable precomputation, false to disable.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method allows enabling or disabling precomputation of reaction rates for performance optimization. When enabled, reaction rates are computed once and stored for later use.</p>
-<dl class="section post"><dt>Postcondition</dt><dd>If precomputation is enabled, reaction rates will be precomputed and cached. If disabled, reaction rates will be computed on-the-fly as needed. </dd></dl>
-
-</div>
-</div>
-<a id="af842981deaf84a698b6cbfa66abcb715" name="af842981deaf84a698b6cbfa66abcb715"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#af842981deaf84a698b6cbfa66abcb715">&#9670;&#160;</a></span>setScreeningModel()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::GraphEngine::setScreeningModel </td>
-          <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a></td>          <td class="paramname"><span class="paramname"><em>model</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Sets the electron screening model for reaction rate calculations. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">model</td><td>The type of screening model to use.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method allows changing the screening model at runtime. Screening corrections account for the electrostatic shielding of nuclei by electrons, which affects reaction rates in dense stellar plasmas. </p>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a50e76977d0dc3cc23d52b51842d35003">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a959928abbef89fd0a20264ef8b79c111" name="a959928abbef89fd0a20264ef8b79c111"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a959928abbef89fd0a20264ef8b79c111">&#9670;&#160;</a></span>setUseReverseReactions()</h2>
-
-<div class="memitem">
-<div class="memproto">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::GraphEngine::setUseReverseReactions </td>
-          <td>(</td>
-          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>useReverse</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-</div><div class="memdoc">
-
-<p>Sets whether to use reverse reactions in the engine. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">useReverse</td><td>True to enable reverse reactions, false to disable.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This method allows enabling or disabling reverse reactions in the engine. If disabled, only forward reactions will be considered in calculations.</p>
-<dl class="section post"><dt>Postcondition</dt><dd>If reverse reactions are enabled, the engine will consider both forward and reverse reactions in its calculations. If disabled, only forward reactions will be considered. </dd></dl>
-
 </div>
 </div>
 <a id="a9af928bf8a5327d3cb45254c0e59f914" name="a9af928bf8a5327d3cb45254c0e59f914"></a>
@@ -2695,72 +2772,6 @@ If a species is in the input comp but not in the network </dd></dl>
 <p>Synchronizes the internal maps. </p>
 <p>This method synchronizes the internal maps used by the engine, including the species map, reaction ID map, and species-to-index map. It also generates the stoichiometry matrix and records the AD tape. </p>
 
-</div>
-</div>
-<a id="a7f6d98a9a4f22f1bbc015b1cbb8198e3" name="a7f6d98a9a4f22f1bbc015b1cbb8198e3"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a7f6d98a9a4f22f1bbc015b1cbb8198e3">&#9670;&#160;</a></span>update()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">fourdst::composition::Composition gridfire::engine::GraphEngine::update </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Updates the state of the network and the composition to be usable for the current network. </p>
-<p>For graph engine all this does is ensure that the returned composition has all the species in the network registered. if a species was already in the composition is will keep its abundance, otherwise it will be added with zero abundance.</p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>The input netIn to use, this includes the composition, temperature, and density</td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>The updated composition that includes all species in the network. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8dd85442ec54f20d91743c72364e36ff">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a87bf3a33fc21f7da2a26173ebdfa69f7" name="a87bf3a33fc21f7da2a26173ebdfa69f7"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a87bf3a33fc21f7da2a26173ebdfa69f7">&#9670;&#160;</a></span>validateConservation()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">bool gridfire::engine::GraphEngine::validateConservation </td>
-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Validates mass and charge conservation across all reactions. </p>
-<dl class="section return"><dt>Returns</dt><dd>True if all reactions conserve mass and charge, false otherwise.</dd></dl>
-<p>This method checks that all reactions in the network conserve mass and charge. If any reaction does not conserve mass or charge, an error message is logged and false is returned. </p>
-
 </div>
 </div>
 <h2 class="groupheader">Member Data Documentation</h2>
@@ -2786,8 +2797,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#a903c99fc607b3e36f434ec2070c7344d">&#9670;&#160;</a></span>m_config</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a83fa78621f43397373f35108f580abab">&#9670;&#160;</a></span>m_authoritativeADFun</h2>
 
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@@ -2796,7 +2807,29 @@ If a species is in the input comp but not in the network </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">Config&amp; gridfire::engine::GraphEngine::m_config = Config::getInstance()</td>
+          <td class="memname">CppAD::ADFun&lt;double&gt; gridfire::engine::GraphEngine::m_authoritativeADFun</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a77527b049b97b2611f5da5279780f5ec" name="a77527b049b97b2611f5da5279780f5ec"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a77527b049b97b2611f5da5279780f5ec">&#9670;&#160;</a></span>m_config</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">Config&lt;<a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a>&gt; gridfire::engine::GraphEngine::m_config</td>
         </tr>
       </table>
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@@ -2850,30 +2883,6 @@ If a species is in the input comp but not in the network </dd></dl>
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-<h2 class="memtitle"><span class="permalink"><a href="#a9087124f3e15614e76754a65d441ca08">&#9670;&#160;</a></span>m_epsADFun</h2>
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-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>CppAD function for the energy generation rate. </p>
-
 </div>
 </div>
 <a id="a636caa7f8085153424e17dc6e343a326" name="a636caa7f8085153424e17dc6e343a326"></a>
@@ -2922,30 +2931,6 @@ If a species is in the input comp but not in the network </dd></dl>
 
 <p>For quick lookups of the base sparsity pattern. </p>
 
-</div>
-</div>
-<a id="af794d0c7e7b78aebfbbf05381e3531a6" name="af794d0c7e7b78aebfbbf05381e3531a6"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#af794d0c7e7b78aebfbbf05381e3531a6">&#9670;&#160;</a></span>m_has_been_primed</h2>
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-        <tr>
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-        </tr>
-      </table>
-  </td>
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-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
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-<p>Flag indicating if the engine has been primed. </p>
-
 </div>
 </div>
 <a id="aac9f28dd58bc0d40a643885c95c2ab52" name="aac9f28dd58bc0d40a643885c95c2ab52"></a>
@@ -2970,30 +2955,6 @@ If a species is in the input comp but not in the network </dd></dl>
 
 <p>Map from index to species in the stoichiometry matrix. </p>
 
-</div>
-</div>
-<a id="a81628fd98da5681396daab00ac573c6c" name="a81628fd98da5681396daab00ac573c6c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a81628fd98da5681396daab00ac573c6c">&#9670;&#160;</a></span>m_jac_work</h2>
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-<div class="memitem">
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-<table class="mlabels">
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-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">CppAD::sparse_jac_work gridfire::engine::GraphEngine::m_jac_work</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Work object for sparse Jacobian calculations. </p>
-
 </div>
 </div>
 <a id="a0a8d12341ecf52446faef9dd8c7dc81e" name="a0a8d12341ecf52446faef9dd8c7dc81e"></a>
@@ -3021,10 +2982,10 @@ If a species is in the input comp but not in the network </dd></dl>
 <div class="line">            {<a class="code hl_enumvalue" href="#a19305dc4affde99bb84056c9eeda9f1ea162cb379760275c9685281ee27025cdb">JacobianMatrixState::READY_DENSE</a>, <span class="stringliteral">&quot;Ready (dense)&quot;</span>},</div>
 <div class="line">            {<a class="code hl_enumvalue" href="#a19305dc4affde99bb84056c9eeda9f1eabf43af1b1ac8bc6cb42296815a429ae3">JacobianMatrixState::READY_SPARSE</a>, <span class="stringliteral">&quot;Ready (sparse)&quot;</span>},</div>
 <div class="line">        }</div>
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-<div class="ttc" id="aclassgridfire_1_1engine_1_1_graph_engine_html_a19305dc4affde99bb84056c9eeda9f1eabf43af1b1ac8bc6cb42296815a429ae3"><div class="ttname"><a href="#a19305dc4affde99bb84056c9eeda9f1eabf43af1b1ac8bc6cb42296815a429ae3">gridfire::engine::GraphEngine::JacobianMatrixState::READY_SPARSE</a></div><div class="ttdeci">@ READY_SPARSE</div><div class="ttdef"><b>Definition</b> engine_graph.h:788</div></div>
-<div class="ttc" id="aclassgridfire_1_1engine_1_1_graph_engine_html_a19305dc4affde99bb84056c9eeda9f1eadd652546039b18970b8dcf2cff824268"><div class="ttname"><a href="#a19305dc4affde99bb84056c9eeda9f1eadd652546039b18970b8dcf2cff824268">gridfire::engine::GraphEngine::JacobianMatrixState::UNINITIALIZED</a></div><div class="ttdeci">@ UNINITIALIZED</div><div class="ttdef"><b>Definition</b> engine_graph.h:785</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_graph_engine_html_a19305dc4affde99bb84056c9eeda9f1ea162cb379760275c9685281ee27025cdb"><div class="ttname"><a href="#a19305dc4affde99bb84056c9eeda9f1ea162cb379760275c9685281ee27025cdb">gridfire::engine::GraphEngine::JacobianMatrixState::READY_DENSE</a></div><div class="ttdeci">@ READY_DENSE</div><div class="ttdef"><b>Definition</b> engine_graph.h:717</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_graph_engine_html_a19305dc4affde99bb84056c9eeda9f1ea4d855a061b3066dc14a3b12ed26b5456"><div class="ttname"><a href="#a19305dc4affde99bb84056c9eeda9f1ea4d855a061b3066dc14a3b12ed26b5456">gridfire::engine::GraphEngine::JacobianMatrixState::STALE</a></div><div class="ttdeci">@ STALE</div><div class="ttdef"><b>Definition</b> engine_graph.h:716</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_graph_engine_html_a19305dc4affde99bb84056c9eeda9f1eabf43af1b1ac8bc6cb42296815a429ae3"><div class="ttname"><a href="#a19305dc4affde99bb84056c9eeda9f1eabf43af1b1ac8bc6cb42296815a429ae3">gridfire::engine::GraphEngine::JacobianMatrixState::READY_SPARSE</a></div><div class="ttdeci">@ READY_SPARSE</div><div class="ttdef"><b>Definition</b> engine_graph.h:718</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_graph_engine_html_a19305dc4affde99bb84056c9eeda9f1eadd652546039b18970b8dcf2cff824268"><div class="ttname"><a href="#a19305dc4affde99bb84056c9eeda9f1eadd652546039b18970b8dcf2cff824268">gridfire::engine::GraphEngine::JacobianMatrixState::UNINITIALIZED</a></div><div class="ttdeci">@ UNINITIALIZED</div><div class="ttdef"><b>Definition</b> engine_graph.h:715</div></div>
 </div><!-- fragment -->
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@@ -3122,8 +3083,8 @@ If a species is in the input comp but not in the network </dd></dl>
 
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+<a id="a2f2e2c700288af48f6fe50a61bb86624" name="a2f2e2c700288af48f6fe50a61bb86624"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2f2e2c700288af48f6fe50a61bb86624">&#9670;&#160;</a></span>m_precomputed_reaction_index_map</h2>
 
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-          <td class="memname">std::unordered_map&lt;uint64_t, size_t&gt; gridfire::engine::GraphEngine::m_precomputedReactionIndexMap</td>
+          <td class="memname">std::unordered_map&lt;uint64_t, size_t&gt; gridfire::engine::GraphEngine::m_precomputed_reaction_index_map</td>
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@@ -3142,12 +3103,10 @@ If a species is in the input comp but not in the network </dd></dl>
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-<p>Set of hashed precomputed reactions for quick lookup. </p>
-
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-<h2 class="memtitle"><span class="permalink"><a href="#a08deff0296d504a23056e6f0382dc664">&#9670;&#160;</a></span>m_precomputedReactions</h2>
+<a id="a0afa15c074fa830e00d981c5786d3ac1" name="a0afa15c074fa830e00d981c5786d3ac1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0afa15c074fa830e00d981c5786d3ac1">&#9670;&#160;</a></span>m_precomputed_reactions</h2>
 
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+          <td class="memname">std::vector&lt;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html">PrecomputedReaction</a>&gt; gridfire::engine::GraphEngine::m_precomputed_reactions</td>
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@@ -3166,8 +3125,6 @@ If a species is in the input comp but not in the network </dd></dl>
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-<p>Precomputed reactions for efficiency. </p>
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 <a id="af7dab9063bb92aac64b6dfa755074739" name="af7dab9063bb92aac64b6dfa755074739"></a>
@@ -3216,30 +3173,6 @@ If a species is in the input comp but not in the network </dd></dl>
 
 <p>Set of REACLIB reactions in the network. </p>
 
-</div>
-</div>
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-<h2 class="memtitle"><span class="permalink"><a href="#aac2420a91b43e1a949a48768e6f3b4f2">&#9670;&#160;</a></span>m_rhsADFun</h2>
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-  <td class="mlabels-right">
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-<p>CppAD function for the right-hand side of the ODE. </p>
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-          <td class="memname">boost::numeric::ublas::compressed_matrix&lt;int&gt; gridfire::engine::GraphEngine::m_stoichiometryMatrix</td>
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   </td>
@@ -3332,7 +3265,7 @@ If a species is in the input comp but not in the network </dd></dl>
 </table>
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-<p>Stoichiometry matrix (species x reactions). </p>
+<p>Flag to enable or disable storing intermediate reaction contributions for debugging. </p>
 
 </div>
 </div>
@@ -3370,7 +3303,7 @@ If a species is in the input comp but not in the network </dd></dl>
   <td class="mlabels-left">
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+          <td class="memname">bool gridfire::engine::GraphEngine::m_useReverseReactions = false</td>
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       </table>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_graph_engine.js b/docs/html/classgridfire_1_1engine_1_1_graph_engine.js
index 1f7145e9..0333148b 100644
--- a/docs/html/classgridfire_1_1engine_1_1_graph_engine.js
+++ b/docs/html/classgridfire_1_1engine_1_1_graph_engine.js
@@ -2,6 +2,7 @@ var classgridfire_1_1engine_1_1_graph_engine =
 [
     [ "AtomicReverseRate", "classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html", "classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate" ],
     [ "constants", "structgridfire_1_1engine_1_1_graph_engine_1_1constants.html", "structgridfire_1_1engine_1_1_graph_engine_1_1constants" ],
+    [ "PrecomputationKernelResults", "structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html", "structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results" ],
     [ "PrecomputedReaction", "structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html", "structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction" ],
     [ "JacobianMatrixState", "classgridfire_1_1engine_1_1_graph_engine.html#a19305dc4affde99bb84056c9eeda9f1e", [
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@@ -13,83 +14,79 @@ var classgridfire_1_1engine_1_1_graph_engine =
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+<text xml:space="preserve" text-anchor="middle" x="508.75" y="-598.76" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="762.5" y="-720.01" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="803" y="-708.76" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="950.62" y="-711.68" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
+<text xml:space="preserve" text-anchor="middle" x="950.62" y="-705.53" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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-<text xml:space="preserve" text-anchor="middle" x="1313.25" y="-471.16" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-465.01" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="803" y="-351.53" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
+<polygon fill="white" stroke="#666666" points="845.5,-382.88 760.5,-382.88 760.5,-363.63 845.5,-363.63 845.5,-382.88"/>
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+<text xml:space="preserve" text-anchor="middle" x="950.62" y="-430.72" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-291.78" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-280.53" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
-<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-269.28" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-285.63" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-274.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-263.13" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="950.62" y="-336.18" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
+<text xml:space="preserve" text-anchor="middle" x="950.62" y="-346.94" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="460" y="-357.16" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
-<text xml:space="preserve" text-anchor="middle" x="508.75" y="-345.91" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
+<polygon fill="white" stroke="#666666" points="565.5,-388.51 452,-388.51 452,-358.01 565.5,-358.01 565.5,-388.51"/>
+<text xml:space="preserve" text-anchor="start" x="460" y="-375.01" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
+<text xml:space="preserve" text-anchor="middle" x="508.75" y="-363.76" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="1079.88" y="-531.16" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
-<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-519.91" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1079.88" y="-525.01" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-513.76" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1313.25" y="-511.83" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-502.15" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-352.76" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-411.78" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-400.53" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
-<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-389.28" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
+<polygon fill="white" stroke="#666666" points="1189.88,-419.13 1055.38,-419.13 1055.38,-377.38 1189.88,-377.38 1189.88,-419.13"/>
+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-405.63" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-394.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-383.13" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1313.25" y="-453.73" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-445.8" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1069.38" y="-351.78" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="1069.38" y="-345.63" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1069.38" y="-334.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, fourdst::atomic</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-323.13" font-family="Helvetica,sans-Serif" font-size="10.00">::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-409.76" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_indexToSpeciesMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1079.88" y="-232.16" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
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+<text xml:space="preserve" text-anchor="start" x="1058.12" y="-226.01" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-286.76" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_partitionFunction</text>
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-<text xml:space="preserve" text-anchor="middle" x="655.88" y="-616.04" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
+<text xml:space="preserve" text-anchor="middle" x="655.88" y="-614.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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-<text xml:space="preserve" text-anchor="middle" x="950.62" y="-677.16" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
+<text xml:space="preserve" text-anchor="middle" x="950.62" y="-671.01" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
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-<text xml:space="preserve" text-anchor="start" x="762.5" y="-726.16" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
-<text xml:space="preserve" text-anchor="middle" x="803" y="-714.91" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
+<polygon fill="white" stroke="#666666" points="851.5,-733.51 754.5,-733.51 754.5,-703.01 851.5,-703.01 851.5,-733.51"/>
+<text xml:space="preserve" text-anchor="start" x="762.5" y="-720.01" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="803" y="-708.76" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="950.62" y="-711.68" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
+<text xml:space="preserve" text-anchor="middle" x="950.62" y="-705.53" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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-<text xml:space="preserve" text-anchor="middle" x="1313.25" y="-471.16" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-465.01" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="803" y="-351.53" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
+<polygon fill="white" stroke="#666666" points="845.5,-382.88 760.5,-382.88 760.5,-363.63 845.5,-363.63 845.5,-382.88"/>
+<text xml:space="preserve" text-anchor="middle" x="803" y="-369.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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+<text xml:space="preserve" text-anchor="middle" x="950.62" y="-430.72" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-291.78" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-280.53" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
-<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-269.28" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-285.63" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-274.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-263.13" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="950.62" y="-346.94" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="460" y="-357.16" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
-<text xml:space="preserve" text-anchor="middle" x="508.75" y="-345.91" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
+<polygon fill="white" stroke="#666666" points="565.5,-388.51 452,-388.51 452,-358.01 565.5,-358.01 565.5,-388.51"/>
+<text xml:space="preserve" text-anchor="start" x="460" y="-375.01" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
+<text xml:space="preserve" text-anchor="middle" x="508.75" y="-363.76" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="1079.88" y="-531.16" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
-<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-519.91" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1079.88" y="-525.01" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-513.76" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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@@ -570,30 +570,30 @@
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-<text xml:space="preserve" text-anchor="middle" x="1313.25" y="-511.83" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-502.15" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-352.76" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-411.78" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1063.38" y="-400.53" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
-<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-389.28" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-405.63" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1063.38" y="-394.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-383.13" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1294.88" y="-445.8" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1069.38" y="-351.78" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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-<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-329.28" font-family="Helvetica,sans-Serif" font-size="10.00">::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1069.38" y="-345.63" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1069.38" y="-334.38" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, fourdst::atomic</text>
+<text xml:space="preserve" text-anchor="middle" x="1122.62" y="-323.13" font-family="Helvetica,sans-Serif" font-size="10.00">::Species &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1414.25" y="-402.12" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::engine::GraphEngine</text>
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-<text xml:space="preserve" text-anchor="middle" x="1637.25" y="-342.5" font-family="Helvetica,sans-Serif" font-size="10.00">::AtomicReverseRate</text>
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+<text xml:space="preserve" text-anchor="middle" x="1600.5" y="-340.5" font-family="Helvetica,sans-Serif" font-size="10.00">::AtomicReverseRate</text>
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-<text xml:space="preserve" text-anchor="middle" x="1525.75" y="-382.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_engine</text>
+<text xml:space="preserve" text-anchor="middle" x="1489" y="-383.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_engine</text>
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-<text xml:space="preserve" text-anchor="start" x="876.75" y="-634.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; JacobianMatrixState,</text>
-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-622.88" font-family="Helvetica,sans-Serif" font-size="10.00"> std::string &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="876.75" y="-649.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="876.75" y="-638.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; JacobianMatrixState,</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-626.88" font-family="Helvetica,sans-Serif" font-size="10.00"> std::string &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-611.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_jacobianMatrixStateNameMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-597.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::string</text>
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+<text xml:space="preserve" text-anchor="start" x="227.25" y="-554.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string&lt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1015.38" y="-646.75" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::engine::GraphEngine</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-635.5" font-family="Helvetica,sans-Serif" font-size="10.00">::constants</text>
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+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-684.5" font-family="Helvetica,sans-Serif" font-size="10.00">::WeakRateInterpolator</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-703.38" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_weakRateInterpolator</text>
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+<text xml:space="preserve" text-anchor="start" x="718.62" y="-701.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="718.62" y="-690.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; uint32_t, gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-678.88" font-family="Helvetica,sans-Serif" font-size="10.00">::rates::weak::IsotopeGrid &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-458.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-484.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactions</text>
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-<text xml:space="preserve" text-anchor="start" x="445.75" y="-464.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-453.5" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
+<polygon fill="white" stroke="#666666" points="556.5,-462.25 437.75,-462.25 437.75,-431.75 556.5,-431.75 556.5,-462.25"/>
+<text xml:space="preserve" text-anchor="start" x="445.75" y="-448.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-437.5" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
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@@ -406,11 +406,11 @@ var sectionId = 'dynsection-1';
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+<path fill="none" stroke="#9a32cd" stroke-dasharray="5,2" d="M568.18,-448C614.78,-448.66 675.32,-449.53 719.52,-450.16"/>
+<polygon fill="#9a32cd" stroke="#9a32cd" points="568.52,-444.5 558.47,-447.86 568.42,-451.5 568.52,-444.5"/>
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-<text xml:space="preserve" text-anchor="middle" x="632.62" y="-489.11" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
+<text xml:space="preserve" text-anchor="middle" x="632.62" y="-451.46" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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-<text xml:space="preserve" text-anchor="middle" x="394.25" y="-443.28" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> ptr</text>
+<text xml:space="preserve" text-anchor="middle" x="394.25" y="-432.91" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> ptr</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.25" y="-501" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
-<text xml:space="preserve" text-anchor="start" x="1035.25" y="-489.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
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-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-467.25" font-family="Helvetica,sans-Serif" font-size="10.00">Reaction * &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-502" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-490.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-479.5" font-family="Helvetica,sans-Serif" font-size="10.00"> gridfire::reaction::</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-468.25" font-family="Helvetica,sans-Serif" font-size="10.00">Reaction * &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="632.62" y="-411.18" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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-<title>Node17&#45;&gt;Node31</title>
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+<!-- Node17&#45;&gt;Node33 -->
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+<title>Node17&#45;&gt;Node33</title>
+<g id="a_edge38_Node000033_Node000017"><a xlink:title=" ">
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-591.07" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-553.46" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
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-<text xml:space="preserve" text-anchor="start" x="739.25" y="-446.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-435.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="739.25" y="-603.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-592.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-498.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-589.17" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-473.25" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-468.73" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-347.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-346.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-381.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-382.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-371.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-359.88" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="448.38" y="-351.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-340.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-430.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-419.5" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-423.63" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-398.4" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-322.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-311.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
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+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-262.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-251.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, fourdst::atomic</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-323.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_indexToSpeciesMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1013.88" y="-202.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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-<text xml:space="preserve" text-anchor="start" x="743" y="-201.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::pair&lt; size_t,</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-153.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-142.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, size_t &gt; &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="743" y="-153.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::pair&lt; size_t,</text>
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+<text xml:space="preserve" text-anchor="start" x="1824.25" y="-364.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="start" x="718.62" y="-701.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-458.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
+<text xml:space="preserve" text-anchor="start" x="728" y="-447.12" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::reaction</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-435.88" font-family="Helvetica,sans-Serif" font-size="10.00">::Reaction &gt; &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-532.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactions</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-484.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactions</text>
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-<text xml:space="preserve" text-anchor="start" x="445.75" y="-464.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-453.5" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
+<polygon fill="white" stroke="#666666" points="556.5,-462.25 437.75,-462.25 437.75,-431.75 556.5,-431.75 556.5,-462.25"/>
+<text xml:space="preserve" text-anchor="start" x="445.75" y="-448.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-437.5" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="632.62" y="-489.11" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
+<text xml:space="preserve" text-anchor="middle" x="632.62" y="-451.46" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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-<text xml:space="preserve" text-anchor="middle" x="394.25" y="-443.28" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> ptr</text>
+<text xml:space="preserve" text-anchor="middle" x="394.25" y="-432.91" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> ptr</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.25" y="-501" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-467.25" font-family="Helvetica,sans-Serif" font-size="10.00">Reaction * &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-502" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-490.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-479.5" font-family="Helvetica,sans-Serif" font-size="10.00"> gridfire::reaction::</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-468.25" font-family="Helvetica,sans-Serif" font-size="10.00">Reaction * &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="632.62" y="-411.18" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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+<!-- Node17&#45;&gt;Node33 -->
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+<title>Node17&#45;&gt;Node33</title>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-591.07" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-553.46" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
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-<text xml:space="preserve" text-anchor="start" x="739.25" y="-446.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-435.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="739.25" y="-603.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-592.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-589.17" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-473.25" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-468.73" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-347.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-346.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-382.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-371.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-359.88" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="448.38" y="-351.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-423.63" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-398.4" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-322.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-311.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-371.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-262.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-251.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, fourdst::atomic</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-323.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_indexToSpeciesMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1013.88" y="-202.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-252.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_partitionFunction</text>
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-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-190.5" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-153.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
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+<text xml:space="preserve" text-anchor="start" x="743" y="-153.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::pair&lt; size_t,</text>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view-members.html b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view-members.html
index 77f4ab8c..b7964a7a 100644
--- a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,66 +105,52 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_multiscale_partitioning_en
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8d4153f520b486dbb262888e22b95896">analyzeTimescalePoolConnectivity</a>(const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;timescale_pools, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a35482c1d5f1d2b3f2cd6c3976432644e">buildConnectivityGraph</a>(const std::vector&lt; fourdst::atomic::Species &gt; &amp;species_pool, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ac720fcea2f0304c3d7e7ba8a6dfb84da">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af030c9bd6a95686a09429b4619ad188c">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa960005503d18066015aef280680d616">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a97d9616558f681ad010ee452394f3519">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a28502c9e8fc0a40211fd3717c2b67214">constructCandidateGroups</a>(const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;candidate_pools, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#accbf5a67f126627833a4169a81f1be01">exportToDot</a>(const std::string &amp;filename, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8950fb9c0c36684538805de4f0acf82e">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aae6c00cff4f7a992513d1e9481436f8f">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a64b6e7e5794cc42edf72899d348d15af">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a552fa7e1f4e066fa577c55500e782014">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afbf1e0c56ea1cd9b41aba49c9db692f5">analyzeTimescalePoolConnectivity</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;timescale_pools, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6d0f041d32f00a8bdce97f9400ddf56f">buildConnectivityGraph</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; fourdst::atomic::Species &gt; &amp;species_pool, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a1e6fe11b37d5ef6da00ec36d06ebc957">calculateEpsDerivatives</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0ef7edd271cec2b1b0e74b828ee25dba">calculateMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add1058c32fbd02f5583cfda4cc60985c">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5c7669454b986ed20db8387e5724b2b0">collectComposition</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0dd152322195c160c73b8d0821e83471">constructCandidateGroups</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;candidate_pools, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a80dc129ae2fc3dd2f1d82e123e7cda3f">constructStateBlob</a>(const scratch::StateBlob *blob) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0408236605abd9c1a9fcb3094a8ebf70">exportToDot</a>(scratch::StateBlob &amp;ctx, const std::string &amp;filename, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#adb4206971c774362ca4a92acae64c0a8">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae8be625f7535f2957a5de7b525020388">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad515fb9edfe551329ded487d43257745">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad80faf5bea2153480cbfb323ed805686">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac5a0def6b6af0bd93bf9057c25f048ff">getDepth</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a7d2f445ae7b75d4cd879afb6e960e0f7">getDynamicSpecies</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aebb0977daa8c6a9c496f0f989f950fae">getFastSpecies</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9dc9de4359beb704b94024f159ae619d">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa7aa38cf054988d050c04c59f28efdaa">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6fc4cb156a287f579cb0f0c5d88d74d0">getNormalizedEquilibratedComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#accdd09720d44cc5efb1ee267706f0500">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a27d68f2e6c4572445cd94dc472470a01">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae0c02c830cf45568a7c4d35d4ed15e95">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aec5ebaccf625e39d0fa6c1330855d008">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a86390e410db48addfe8dbd094743c38e">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a1372e7a823841c819f6c1a15d38217a6">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae7f2939150a5ed84e51028c8ebd83d17">group_is_a_qse_cluster</a>(const fourdst::composition::Composition &amp;comp, double T9, double rho, const QSEGroup &amp;group) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6adac01afdd51cb3660e38731afbd265">group_is_a_qse_pipeline</a>(const fourdst::composition::Composition &amp;comp, double T9, double rho, const QSEGroup &amp;group) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a72d813f71b378dfd6f632e6b9adf1cc5">identifyMeanSlowestPool</a>(const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;pools, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad8615cd1f4b78ec1c1448c96c54913e4">involvesSpecies</a>(const fourdst::atomic::Species &amp;species) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa55fe8b346dca4a06027acac9a2547a3">involvesSpeciesInDynamic</a>(const fourdst::atomic::Species &amp;species) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a4476e65dd6ce8700f5163ff7b29185e4">involvesSpeciesInQSE</a>(const fourdst::atomic::Species &amp;species) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a10dd189ba40dbb604fdf55746b5d4b79">isStale</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ab6c4cddda054dfa35f6e0a083015dc9d">m_activeReactionIndices</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a40ddd53c7f5482237e4bad38525ee100">m_activeSpeciesIndices</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#abcf6a7ba929fe4c45e2a4deeb2bfca82">m_algebraic_abundances</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aac8ac0afe8fd443b661d849e9b1b5e72">m_algebraic_species</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ab321a6bbd96cf41e2fafdf73169f882a">getDynamicSpecies</a>(scratch::StateBlob &amp;ctx)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a11b430d8fb34a7ad934a9880c207c9ef">getFastSpecies</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9eeedbcf35b6cb0341a51ba1dddc97fe">getMostRecentRHSCalculation</a>(scratch::StateBlob &amp;) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ac2141220d0d504bb9c1cb31ce03d957e">getNetworkReactions</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9a43b1fe2124333acd338acffeb2e8c7">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a3672842614caa53cd2e0aacb4d6042e5">getNormalizedEquilibratedComposition</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afab9ea03b2f6b97e9c40249ab8834107">getScreeningModel</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8e50f727ca6b42c27b9d5786e078ff6a">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#acc2a6a05b5587ca4ae615bff79bc6a61">getSpeciesIndex</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a51abea9730a700dcffecdde9adbc0456">getSpeciesStatus</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af40e016e8e0206462595ccf6281411ef">getSpeciesTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aaa3e3f630482996d96775448727d124b">group_is_a_qse_cluster</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho, const QSEGroup &amp;group) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a23315ce30a2adc95dafdc70d469ae3e8">group_is_a_qse_pipeline</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho, const QSEGroup &amp;group) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a496aec9ae2ac6e5fc7839e7d6c44f244">identifyMeanSlowestPool</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;pools, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a3f545c702d7c905f0158099009f8b5a6">involvesSpecies</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aead8b6b6d3aa580084b3ab39f5126e77">involvesSpeciesInDynamic</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a2f8e26e75c3d39de978004370b04c451">involvesSpeciesInQSE</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a460e8e46d38b81efa510714a3375f674">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a38b0eb7e7e454e001254aa823b1ec3f7">m_composition_cache</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a69baf327ba82f923859c569bc4d76ee8">m_dynamic_species</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add096961cacfa9206ae5227d4f3a3c36">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a36ccf1d3b4cefba461acddcb238f27a5">m_qse_groups</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a3d0cde126563adc97b998bade1132603">m_qse_solvers</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a76c2ce886f8774f56a2ee9e0ae1b9893">m_sun_ctx</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa839c3893ff9fb8e5a4187224dac7b47">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a4da0432598ecb0415b70b94d8300d3ef">merge_coupled_groups</a>(const std::vector&lt; QSEGroup &gt; &amp;groups, const std::vector&lt; reaction::ReactionSet &gt; &amp;groupReactions)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a89ccae586536ab8f13113fd366513102">merge_coupled_groups</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; QSEGroup &gt; &amp;groups, const std::vector&lt; reaction::ReactionSet &gt; &amp;groupReactions)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0a500b19283ad3dd654ca4c4646b2604">MultiscalePartitioningEngineView</a>(DynamicEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aaba92340dd44399c48bc219ec63f94e2">partitionByTimescale</a>(const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a7629f98050d71160fc34e5c7c0b3e959">partitionNetwork</a>(const NetIn &amp;netIn)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afabb6222bd6cbe3277b6c8639203be25">primeEngine</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a601a4fb916f003c9ff7cf000a8006bab">pruneValidatedGroups</a>(const std::vector&lt; QSEGroup &gt; &amp;groups, const std::vector&lt; reaction::ReactionSet &gt; &amp;groupReactions, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a892741542388166db4dc55631567ee0a">QSEPartition</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa378d0e0fa6018b989d83945daa47952">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad11aa1e168ec03d0c3ed90eeddcefe52">setScreeningModel</a>(screening::ScreeningType model) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6c785a6334e5fd9593d3e279bafee592">solveQSEAbundances</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a28c8ac1ec594cf55a297e3f9586e214a">update</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#acf5cfbd18ebb2566f637cb176f861423">validateGroupsWithFluxAnalysis</a>(const std::vector&lt; QSEGroup &gt; &amp;candidate_groups, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae553a4d590c0cfae5591bcd8bbe6f9d3">~MultiscalePartitioningEngineView</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ab21446291370ae1d330c7256733c0dd0">partitionByTimescale</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af4798d726d6e9d554ec741220e31c681">partitionNetwork</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5dff14dcced4b23c42a72108b796e783">primeEngine</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a063c097e6afdadabbb79fabd61b21d0b">project</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a32e4bc6799cc14baccf341f07da0e6b6">pruneValidatedGroups</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; QSEGroup &gt; &amp;groups, const std::vector&lt; reaction::ReactionSet &gt; &amp;groupReactions, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a892741542388166db4dc55631567ee0a">QSEPartition</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#adcc3bd5427974ecc3e1b2af60f948186">solveQSEAbundances</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const -&gt; fourdst::composition::Composition</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa449a5eadf14462e4ff270ed62c63fab">validateGroupsWithFluxAnalysis</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; QSEGroup &gt; &amp;candidate_groups, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html
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 <a href="#nested-classes">Classes</a> &#124;
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+<a href="#pub-static-methods">Static Public Member Functions</a> &#124;
 <a href="#pri-types">Private Types</a> &#124;
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 <a href="#pri-static-methods">Static Private Member Functions</a> &#124;
@@ -123,7 +124,7 @@ Inheritance diagram for gridfire::engine::MultiscalePartitioningEngineView:</div
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+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-static-methods" name="pub-static-methods"></a>
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+<tr class="memitem:a6d0f041d32f00a8bdce97f9400ddf56f" id="r_a6d0f041d32f00a8bdce97f9400ddf56f"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; fourdst::atomic::Species, std::vector&lt; fourdst::atomic::Species &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6d0f041d32f00a8bdce97f9400ddf56f">buildConnectivityGraph</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; fourdst::atomic::Species &gt; &amp;species_pool, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td></tr>
+<tr class="memdesc:a6d0f041d32f00a8bdce97f9400ddf56f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Builds a connectivity graph from a species pool.  <br /></td></tr>
+<tr class="separator:a6d0f041d32f00a8bdce97f9400ddf56f"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a0dd152322195c160c73b8d0821e83471"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs candidate QSE groups from connected timescale pools.  <br /></td></tr>
+<tr class="separator:a0dd152322195c160c73b8d0821e83471"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:afbf1e0c56ea1cd9b41aba49c9db692f5"><td class="mdescLeft">&#160;</td><td class="mdescRight">Analyzes the connectivity of timescale pools.  <br /></td></tr>
+<tr class="separator:afbf1e0c56ea1cd9b41aba49c9db692f5"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a32e4bc6799cc14baccf341f07da0e6b6" id="r_a32e4bc6799cc14baccf341f07da0e6b6"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">QSEGroup</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a32e4bc6799cc14baccf341f07da0e6b6">pruneValidatedGroups</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">QSEGroup</a> &gt; &amp;groups, const std::vector&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &gt; &amp;groupReactions, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td></tr>
+<tr class="separator:a32e4bc6799cc14baccf341f07da0e6b6"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-static-methods" name="pri-static-methods"></a>
 Static Private Member Functions</h2></td></tr>
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-<tr class="separator:a4da0432598ecb0415b70b94d8300d3ef"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a89ccae586536ab8f13113fd366513102"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
 Private Attributes</h2></td></tr>
@@ -301,36 +288,11 @@ Private Attributes</h2></td></tr>
 <tr class="memitem:a460e8e46d38b81efa510714a3375f674" id="r_a460e8e46d38b81efa510714a3375f674"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a460e8e46d38b81efa510714a3375f674">m_baseEngine</a></td></tr>
 <tr class="memdesc:a460e8e46d38b81efa510714a3375f674"><td class="mdescLeft">&#160;</td><td class="mdescRight">The base engine to which this view delegates calculations.  <br /></td></tr>
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-<tr class="memdesc:a36ccf1d3b4cefba461acddcb238f27a5"><td class="mdescLeft">&#160;</td><td class="mdescRight">The list of identified equilibrium groups.  <br /></td></tr>
-<tr class="separator:a36ccf1d3b4cefba461acddcb238f27a5"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a3d0cde126563adc97b998bade1132603" id="r_a3d0cde126563adc97b998bade1132603"><td class="memItemLeft" align="right" valign="top">std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">QSESolver</a> &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3d0cde126563adc97b998bade1132603">m_qse_solvers</a></td></tr>
-<tr class="memdesc:a3d0cde126563adc97b998bade1132603"><td class="mdescLeft">&#160;</td><td class="mdescRight">A set of solvers, one for each QSE group.  <br /></td></tr>
-<tr class="separator:a3d0cde126563adc97b998bade1132603"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a69baf327ba82f923859c569bc4d76ee8"><td class="mdescLeft">&#160;</td><td class="mdescRight">The simplified set of species presented to the solver (the "slow" species).  <br /></td></tr>
-<tr class="separator:a69baf327ba82f923859c569bc4d76ee8"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:aac8ac0afe8fd443b661d849e9b1b5e72"><td class="mdescLeft">&#160;</td><td class="mdescRight">Species that are treated as algebraic (in QSE) in the QSE groups.  <br /></td></tr>
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-<tr class="memitem:abcf6a7ba929fe4c45e2a4deeb2bfca82" id="r_abcf6a7ba929fe4c45e2a4deeb2bfca82"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; fourdst::atomic::Species, double &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#abcf6a7ba929fe4c45e2a4deeb2bfca82">m_algebraic_abundances</a></td></tr>
-<tr class="memdesc:abcf6a7ba929fe4c45e2a4deeb2bfca82"><td class="mdescLeft">&#160;</td><td class="mdescRight">Map from species to their calculated abundances in the QSE state.  <br /></td></tr>
-<tr class="separator:abcf6a7ba929fe4c45e2a4deeb2bfca82"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a40ddd53c7f5482237e4bad38525ee100" id="r_a40ddd53c7f5482237e4bad38525ee100"><td class="memItemLeft" align="right" valign="top">std::vector&lt; size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a40ddd53c7f5482237e4bad38525ee100">m_activeSpeciesIndices</a></td></tr>
-<tr class="memdesc:a40ddd53c7f5482237e4bad38525ee100"><td class="mdescLeft">&#160;</td><td class="mdescRight">Indices of all species considered active in the current partition (dynamic + algebraic).  <br /></td></tr>
-<tr class="separator:a40ddd53c7f5482237e4bad38525ee100"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ab6c4cddda054dfa35f6e0a083015dc9d" id="r_ab6c4cddda054dfa35f6e0a083015dc9d"><td class="memItemLeft" align="right" valign="top">std::vector&lt; size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab6c4cddda054dfa35f6e0a083015dc9d">m_activeReactionIndices</a></td></tr>
-<tr class="memdesc:ab6c4cddda054dfa35f6e0a083015dc9d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Indices of all reactions involving only active species.  <br /></td></tr>
-<tr class="separator:ab6c4cddda054dfa35f6e0a083015dc9d"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a38b0eb7e7e454e001254aa823b1ec3f7" id="r_a38b0eb7e7e454e001254aa823b1ec3f7"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; uint64_t, fourdst::composition::Composition &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a38b0eb7e7e454e001254aa823b1ec3f7">m_composition_cache</a></td></tr>
-<tr class="separator:a38b0eb7e7e454e001254aa823b1ec3f7"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a76c2ce886f8774f56a2ee9e0ae1b9893" id="r_a76c2ce886f8774f56a2ee9e0ae1b9893"><td class="memItemLeft" align="right" valign="top">SUNContext&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a76c2ce886f8774f56a2ee9e0ae1b9893">m_sun_ctx</a> = nullptr</td></tr>
-<tr class="separator:a76c2ce886f8774f56a2ee9e0ae1b9893"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>An engine view that partitions the reaction network into multiple groups based on timescales. </p>
 <dl class="section user"><dt>Purpose</dt><dd>This class is designed to accelerate the integration of stiff nuclear reaction networks. It identifies species that react on very short timescales ("fast" species) and treats them as being in Quasi-Steady-State Equilibrium (QSE). Their abundances are solved for algebraically, removing their stiff differential equations from the system. The remaining "slow" or "dynamic" species are integrated normally. This significantly improves the stability and performance of the solver.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>The core logic resides in the <code><a class="el" href="#a7629f98050d71160fc34e5c7c0b3e959" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> and <code>equilibrateNetwork()</code> methods. The partitioning process involves:<ol type="1">
+<dl class="section user"><dt>How</dt><dd>The core logic resides in the <code><a class="el" href="#af4798d726d6e9d554ec741220e31c681" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> and <code>equilibrateNetwork()</code> methods. The partitioning process involves:<ol type="1">
 <li><b>Timescale Analysis:</b> Using <code>getSpeciesDestructionTimescales</code> from the base engine, all species are sorted by their characteristic timescales.</li>
 <li><b>Gap Detection:</b> The sorted list of timescales is scanned for large gaps (e.g., several orders of magnitude) to create distinct "timescale pools".</li>
 <li><b>Connectivity Analysis:</b> Each pool is analyzed for internal reaction connectivity to form cohesive groups.</li>
@@ -415,36 +377,11 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-</div>
-</div>
-<a id="ae553a4d590c0cfae5591bcd8bbe6f9d3" name="ae553a4d590c0cfae5591bcd8bbe6f9d3"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ae553a4d590c0cfae5591bcd8bbe6f9d3">&#9670;&#160;</a></span>~MultiscalePartitioningEngineView()</h2>
-
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-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">gridfire::engine::MultiscalePartitioningEngineView::~MultiscalePartitioningEngineView </td>
-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a8d4153f520b486dbb262888e22b95896" name="a8d4153f520b486dbb262888e22b95896"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8d4153f520b486dbb262888e22b95896">&#9670;&#160;</a></span>analyzeTimescalePoolConnectivity()</h2>
+<a id="afbf1e0c56ea1cd9b41aba49c9db692f5" name="afbf1e0c56ea1cd9b41aba49c9db692f5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afbf1e0c56ea1cd9b41aba49c9db692f5">&#9670;&#160;</a></span>analyzeTimescalePoolConnectivity()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -455,6 +392,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; std::vector&lt; Species &gt; &gt; gridfire::engine::MultiscalePartitioningEngineView::analyzeTimescalePoolConnectivity </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>timescale_pools</em></span>, </td>
         </tr>
         <tr>
@@ -483,6 +425,7 @@ Private Attributes</h2></td></tr>
 <p>Analyzes the connectivity of timescale pools. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">timescale_pools</td><td>A vector of vectors of species indices, where each inner vector represents a timescale pool. </td></tr>
     <tr><td class="paramname">comp</td><td></td></tr>
     <tr><td class="paramname">T9</td><td></td></tr>
@@ -496,8 +439,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a35482c1d5f1d2b3f2cd6c3976432644e" name="a35482c1d5f1d2b3f2cd6c3976432644e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a35482c1d5f1d2b3f2cd6c3976432644e">&#9670;&#160;</a></span>buildConnectivityGraph()</h2>
+<a id="a6d0f041d32f00a8bdce97f9400ddf56f" name="a6d0f041d32f00a8bdce97f9400ddf56f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6d0f041d32f00a8bdce97f9400ddf56f">&#9670;&#160;</a></span>buildConnectivityGraph()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -508,6 +451,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::unordered_map&lt; Species, std::vector&lt; Species &gt; &gt; gridfire::engine::MultiscalePartitioningEngineView::buildConnectivityGraph </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; fourdst::atomic::Species &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>species_pool</em></span>, </td>
         </tr>
         <tr>
@@ -536,6 +484,7 @@ Private Attributes</h2></td></tr>
 <p>Builds a connectivity graph from a species pool. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">species_pool</td><td>A vector of species indices representing a species pool. </td></tr>
     <tr><td class="paramname">comp</td><td></td></tr>
     <tr><td class="paramname">T9</td><td></td></tr>
@@ -549,8 +498,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="ac720fcea2f0304c3d7e7ba8a6dfb84da" name="ac720fcea2f0304c3d7e7ba8a6dfb84da"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac720fcea2f0304c3d7e7ba8a6dfb84da">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
+<a id="a1e6fe11b37d5ef6da00ec36d06ebc957" name="a1e6fe11b37d5ef6da00ec36d06ebc957"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1e6fe11b37d5ef6da00ec36d06ebc957">&#9670;&#160;</a></span>calculateEpsDerivatives()</h2>
 
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@@ -561,6 +510,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">EnergyDerivatives</a> gridfire::engine::MultiscalePartitioningEngineView::calculateEpsDerivatives </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -584,6 +538,7 @@ Private Attributes</h2></td></tr>
 <p>Calculates the energy generation rate derivatives with respect to abundances. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3. </td></tr>
@@ -592,12 +547,12 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>The energy generation rate derivatives (dEps/dT and dEps/drho). </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ada6a1295a92c2aede841672ecae0cede">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a3fd5d4f3c58d1790b7a517b5ef888eaf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="af030c9bd6a95686a09429b4619ad188c" name="af030c9bd6a95686a09429b4619ad188c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#af030c9bd6a95686a09429b4619ad188c">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
+<a id="a0ef7edd271cec2b1b0e74b828ee25dba" name="a0ef7edd271cec2b1b0e74b828ee25dba"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0ef7edd271cec2b1b0e74b828ee25dba">&#9670;&#160;</a></span>calculateMolarReactionFlow()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -608,6 +563,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">double gridfire::engine::MultiscalePartitioningEngineView::calculateMolarReactionFlow </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>, </td>
         </tr>
         <tr>
@@ -636,6 +596,7 @@ Private Attributes</h2></td></tr>
 <p>Calculates the molar reaction flow for a given reaction. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">reaction</td><td>The reaction for which to calculate the flow. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -654,12 +615,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa57fa5e58b98a03fba31bcddda8001d4">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#abf0f13b9eae66da6119e6fca826379e8">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="aa960005503d18066015aef280680d616" name="aa960005503d18066015aef280680d616"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa960005503d18066015aef280680d616">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
+<a id="add1058c32fbd02f5583cfda4cc60985c" name="add1058c32fbd02f5583cfda4cc60985c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#add1058c32fbd02f5583cfda4cc60985c">&#9670;&#160;</a></span>calculateRHSAndEnergy()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -670,6 +631,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::calculateRHSAndEnergy </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -680,7 +646,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -693,30 +664,32 @@ Private Attributes</h2></td></tr>
 <p>Calculates the right-hand side (dY/dt) and energy generation. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td></td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A <code>std::expected</code> containing <code><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html" title="Structure holding derivatives and energy generation for a network step.">StepDerivatives</a>&lt;double&gt;</code> on success, or a <code>StaleEngineError</code> if the engine's QSE cache does not contain a solution for the given state.</dd></dl>
 <dl class="section user"><dt>Purpose</dt><dd>To compute the time derivatives for the ODE solver. This implementation modifies the derivatives from the base engine to enforce the QSE condition.</dd></dl>
 <dl class="section user"><dt>How</dt><dd>It first performs a lookup in the QSE abundance cache (<code>m_qse_abundance_cache</code>). If a cache hit occurs, it calls the base engine's <code>calculateRHSAndEnergy</code>. It then manually sets the time derivatives (<code>dydt</code>) of all identified algebraic species to zero, effectively removing their differential equations from the system being solved.</dd></dl>
-<dl class="section pre"><dt>Precondition</dt><dd>The engine must have been updated via <code><a class="el" href="#a28c8ac1ec594cf55a297e3f9586e214a" title="Updates the internal state of the engine, performing partitioning and QSE equilibration.">update()</a></code> or <code>equilibrateNetwork()</code> for the current thermodynamic conditions, so that a valid entry exists in the QSE cache. </dd></dl>
+<dl class="section pre"><dt>Precondition</dt><dd>The engine must have been updated via <code>update()</code> or <code>equilibrateNetwork()</code> for the current thermodynamic conditions, so that a valid entry exists in the QSE cache. </dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>The returned derivatives will have <code>dydt=0</code> for all algebraic species.</dd></dl>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
-    <tr><td class="paramname">StaleEngineError</td><td>If the QSE cache does not contain an entry for the given (T9, rho, Y_full). This indicates <code><a class="el" href="#a28c8ac1ec594cf55a297e3f9586e214a" title="Updates the internal state of the engine, performing partitioning and QSE equilibration.">update()</a></code> was not called recently enough. </td></tr>
+    <tr><td class="paramname">StaleEngineError</td><td>If the QSE cache does not contain an entry for the given (T9, rho, Y_full). This indicates <code>update()</code> was not called recently enough. </td></tr>
   </table>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a764fc091c72c12c8529105d7c96badb2">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>.</p>
 
 </div>
 </div>
-<a id="a97d9616558f681ad010ee452394f3519" name="a97d9616558f681ad010ee452394f3519"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a97d9616558f681ad010ee452394f3519">&#9670;&#160;</a></span>collectComposition()</h2>
+<a id="a5c7669454b986ed20db8387e5724b2b0" name="a5c7669454b986ed20db8387e5724b2b0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5c7669454b986ed20db8387e5724b2b0">&#9670;&#160;</a></span>collectComposition()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -727,6 +700,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">fourdst::composition::Composition gridfire::engine::MultiscalePartitioningEngineView::collectComposition </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -750,6 +728,7 @@ Private Attributes</h2></td></tr>
 <p>Collect the composition from this and sub engines. </p>
 <p>This method operates by injecting the current equilibrium abundances for algebraic species into the composition object so that they can be bubbled up to the caller. </p><dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>Input Composition </td></tr>
     <tr><td class="paramname">T9</td><td></td></tr>
     <tr><td class="paramname">rho</td><td></td></tr>
@@ -764,12 +743,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a41877719ae5e8de53c1692c7cf9bfbfc">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="a28502c9e8fc0a40211fd3717c2b67214" name="a28502c9e8fc0a40211fd3717c2b67214"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a28502c9e8fc0a40211fd3717c2b67214">&#9670;&#160;</a></span>constructCandidateGroups()</h2>
+<a id="a0dd152322195c160c73b8d0821e83471" name="a0dd152322195c160c73b8d0821e83471"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0dd152322195c160c73b8d0821e83471">&#9670;&#160;</a></span>constructCandidateGroups()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -780,6 +759,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">MultiscalePartitioningEngineView::QSEGroup</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::constructCandidateGroups </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>candidate_pools</em></span>, </td>
         </tr>
         <tr>
@@ -808,6 +792,7 @@ Private Attributes</h2></td></tr>
 <p>Constructs candidate QSE groups from connected timescale pools. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">candidate_pools</td><td>A vector of vectors of species indices, where each inner vector represents a connected pool of species with similar fast timescales. </td></tr>
     <tr><td class="paramname">comp</td><td>Vector of current molar abundances. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -822,8 +807,35 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="accbf5a67f126627833a4169a81f1be01" name="accbf5a67f126627833a4169a81f1be01"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#accbf5a67f126627833a4169a81f1be01">&#9670;&#160;</a></span>exportToDot()</h2>
+<a id="a80dc129ae2fc3dd2f1d82e123e7cda3f" name="a80dc129ae2fc3dd2f1d82e123e7cda3f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a80dc129ae2fc3dd2f1d82e123e7cda3f">&#9670;&#160;</a></span>constructStateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::constructStateBlob </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> *</td>          <td class="paramname"><span class="paramname"><em>blob</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="a0408236605abd9c1a9fcb3094a8ebf70" name="a0408236605abd9c1a9fcb3094a8ebf70"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0408236605abd9c1a9fcb3094a8ebf70">&#9670;&#160;</a></span>exportToDot()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -831,6 +843,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">void gridfire::engine::MultiscalePartitioningEngineView::exportToDot </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span>, </td>
         </tr>
         <tr>
@@ -854,6 +871,7 @@ Private Attributes</h2></td></tr>
 <p>Exports the network to a DOT file for visualization. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">filename</td><td>The name of the DOT file to create. </td></tr>
     <tr><td class="paramname">comp</td><td>Composition object </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -866,8 +884,8 @@ Private Attributes</h2></td></tr>
 
 </div>
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-<a id="a8950fb9c0c36684538805de4f0acf82e" name="a8950fb9c0c36684538805de4f0acf82e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8950fb9c0c36684538805de4f0acf82e">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
+<a id="adb4206971c774362ca4a92acae64c0a8" name="adb4206971c774362ca4a92acae64c0a8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adb4206971c774362ca4a92acae64c0a8">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[1/3]</span></h2>
 
 <div class="memitem">
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@@ -878,6 +896,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::MultiscalePartitioningEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -901,6 +924,7 @@ Private Attributes</h2></td></tr>
 <p>Generates the Jacobian matrix for the current state. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3.</td></tr>
@@ -918,12 +942,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a53276f09346b531f8676db355e1219eb">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab6d95491f017feb4c43d9fa05739fcd0">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="a64b6e7e5794cc42edf72899d348d15af" name="a64b6e7e5794cc42edf72899d348d15af"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a64b6e7e5794cc42edf72899d348d15af">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
+<a id="ad515fb9edfe551329ded487d43257745" name="ad515fb9edfe551329ded487d43257745"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad515fb9edfe551329ded487d43257745">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[2/3]</span></h2>
 
 <div class="memitem">
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@@ -934,6 +958,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::MultiscalePartitioningEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -962,6 +991,7 @@ Private Attributes</h2></td></tr>
 <p>Generates the Jacobian matrix using a sparsity pattern. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -980,12 +1010,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a51d55a21be28e372021b2b8e5ecdc551">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a78f7b315bfa0a1f34d8fd5ab652b6934">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="aae6c00cff4f7a992513d1e9481436f8f" name="aae6c00cff4f7a992513d1e9481436f8f"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aae6c00cff4f7a992513d1e9481436f8f">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
+<a id="ae8be625f7535f2957a5de7b525020388" name="ae8be625f7535f2957a5de7b525020388"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae8be625f7535f2957a5de7b525020388">&#9670;&#160;</a></span>generateJacobianMatrix() <span class="overload">[3/3]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -996,6 +1026,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::MultiscalePartitioningEngineView::generateJacobianMatrix </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1024,6 +1059,7 @@ Private Attributes</h2></td></tr>
 <p>Generates the Jacobian matrix for a subset of active species. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -1042,38 +1078,7 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a15d53dac8b622a3b7d0f928a3995dbde">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a552fa7e1f4e066fa577c55500e782014" name="a552fa7e1f4e066fa577c55500e782014"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a552fa7e1f4e066fa577c55500e782014">&#9670;&#160;</a></span>generateStoichiometryMatrix()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::MultiscalePartitioningEngineView::generateStoichiometryMatrix </td>
-          <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Generates the stoichiometry matrix for the network. </p>
-<dl class="section user"><dt>Purpose</dt><dd>To prepare the stoichiometry matrix for later queries.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#a552fa7e1f4e066fa577c55500e782014" title="Generates the stoichiometry matrix for the network.">generateStoichiometryMatrix()</a></code>. The stoichiometry is based on the full, unpartitioned network. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5e2c45a3e415b53e41def8f743f93464">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a983551b5fef4610799c062cb5be2b1c7">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
@@ -1095,7 +1100,7 @@ Private Attributes</h2></td></tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -1107,8 +1112,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a7d2f445ae7b75d4cd879afb6e960e0f7" name="a7d2f445ae7b75d4cd879afb6e960e0f7"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a7d2f445ae7b75d4cd879afb6e960e0f7">&#9670;&#160;</a></span>getDynamicSpecies()</h2>
+<a id="ab321a6bbd96cf41e2fafdf73169f882a" name="ab321a6bbd96cf41e2fafdf73169f882a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab321a6bbd96cf41e2fafdf73169f882a">&#9670;&#160;</a></span>getDynamicSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1119,13 +1124,13 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">const std::vector&lt; Species &gt; &amp; gridfire::engine::MultiscalePartitioningEngineView::getDynamicSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -1134,12 +1139,12 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>A const reference to the vector of species identified as "dynamic" or "slow".</dd></dl>
 <dl class="section user"><dt>Purpose</dt><dd>To allow external queries of the partitioning results.</dd></dl>
 <dl class="section user"><dt>How</dt><dd>It returns a const reference to the <code>m_dynamic_species</code> member vector.</dd></dl>
-<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#a7629f98050d71160fc34e5c7c0b3e959" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
+<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#af4798d726d6e9d554ec741220e31c681" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
 
 </div>
 </div>
-<a id="aebb0977daa8c6a9c496f0f989f950fae" name="aebb0977daa8c6a9c496f0f989f950fae"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aebb0977daa8c6a9c496f0f989f950fae">&#9670;&#160;</a></span>getFastSpecies()</h2>
+<a id="a11b430d8fb34a7ad934a9880c207c9ef" name="a11b430d8fb34a7ad934a9880c207c9ef"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a11b430d8fb34a7ad934a9880c207c9ef">&#9670;&#160;</a></span>getFastSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1150,7 +1155,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; Species &gt; gridfire::engine::MultiscalePartitioningEngineView::getFastSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1165,12 +1170,39 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>A vector of species identified as "fast" or "algebraic" by the partitioning.</dd></dl>
 <dl class="section user"><dt>Purpose</dt><dd>To allow external queries of the partitioning results.</dd></dl>
 <dl class="section user"><dt>How</dt><dd>It returns a copy of the <code>m_algebraic_species</code> member vector.</dd></dl>
-<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#a7629f98050d71160fc34e5c7c0b3e959" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
+<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#af4798d726d6e9d554ec741220e31c681" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
 
 </div>
 </div>
-<a id="a9dc9de4359beb704b94024f159ae619d" name="a9dc9de4359beb704b94024f159ae619d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a9dc9de4359beb704b94024f159ae619d">&#9670;&#160;</a></span>getNetworkReactions()</h2>
+<a id="a9eeedbcf35b6cb0341a51ba1dddc97fe" name="a9eeedbcf35b6cb0341a51ba1dddc97fe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9eeedbcf35b6cb0341a51ba1dddc97fe">&#9670;&#160;</a></span>getMostRecentRHSCalculation()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt; gridfire::engine::MultiscalePartitioningEngineView::getMostRecentRHSCalculation </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30cc7809d53540bd3407d971de8eec48">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="ac2141220d0d504bb9c1cb31ce03d957e" name="ac2141220d0d504bb9c1cb31ce03d957e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac2141220d0d504bb9c1cb31ce03d957e">&#9670;&#160;</a></span>getNetworkReactions()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1181,7 +1213,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp; gridfire::engine::MultiscalePartitioningEngineView::getNetworkReactions </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1195,12 +1227,12 @@ Private Attributes</h2></td></tr>
 <p>Gets the set of logical reactions in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>A const reference to the <code>LogicalReactionSet</code> from the base engine, containing all reactions in the full network. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a26b59a4c7622bf820c0eeec6a7522aa8">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a77a889cbc3791beca4abb95cb663a4d6">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
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-<a id="aa7aa38cf054988d050c04c59f28efdaa" name="aa7aa38cf054988d050c04c59f28efdaa"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa7aa38cf054988d050c04c59f28efdaa">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
+<a id="a9a43b1fe2124333acd338acffeb2e8c7" name="a9a43b1fe2124333acd338acffeb2e8c7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9a43b1fe2124333acd338acffeb2e8c7">&#9670;&#160;</a></span>getNetworkSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1211,7 +1243,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">const std::vector&lt; Species &gt; &amp; gridfire::engine::MultiscalePartitioningEngineView::getNetworkSpecies </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1225,12 +1257,12 @@ Private Attributes</h2></td></tr>
 <p>Gets the list of species in the network. </p>
 <dl class="section return"><dt>Returns</dt><dd>A const reference to the vector of <code>Species</code> objects representing all species in the underlying base engine. This view does not alter the species list itself, only how their abundances are evolved. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a3263c3fde2509d5d8ec4da3b6e946c48">gridfire::engine::Engine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_engine.html#afa8b1970e20f4bab61e4d31ead09f930">gridfire::engine::Engine</a>.</p>
 
 </div>
 </div>
-<a id="a6fc4cb156a287f579cb0f0c5d88d74d0" name="a6fc4cb156a287f579cb0f0c5d88d74d0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6fc4cb156a287f579cb0f0c5d88d74d0">&#9670;&#160;</a></span>getNormalizedEquilibratedComposition()</h2>
+<a id="a3672842614caa53cd2e0aacb4d6042e5" name="a3672842614caa53cd2e0aacb4d6042e5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3672842614caa53cd2e0aacb4d6042e5">&#9670;&#160;</a></span>getNormalizedEquilibratedComposition()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1238,6 +1270,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">fourdst::composition::Composition gridfire::engine::MultiscalePartitioningEngineView::getNormalizedEquilibratedComposition </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1248,7 +1285,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>trust</em></span>&#160;) const</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -1256,15 +1298,17 @@ Private Attributes</h2></td></tr>
 <p>Gets a normalized composition with QSE species equilibrated. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The input composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
+    <tr><td class="paramname">trust</td><td></td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A new <code>Composition</code> object with algebraic species set to their equilibrium values.</dd></dl>
 <dl class="section user"><dt>Purpose</dt><dd>To provide a way to get the equilibrated composition without modifying the internal state.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>It calls <code><a class="el" href="#a6c785a6334e5fd9593d3e279bafee592" title="Solves for the QSE abundances of the algebraic species in a given state.">solveQSEAbundances()</a></code> to compute the equilibrium abundances for the algebraic species, then constructs a new <code>Composition</code> object reflecting these values.</dd></dl>
+<dl class="section user"><dt>How</dt><dd>It calls <code><a class="el" href="#adcc3bd5427974ecc3e1b2af60f948186" title="Solves for the QSE abundances of the algebraic species in a given state.">solveQSEAbundances()</a></code> to compute the equilibrium abundances for the algebraic species, then constructs a new <code>Composition</code> object reflecting these values.</dd></dl>
 <dl class="section pre"><dt>Precondition</dt><dd>The engine must have a valid QSE partition for the given state. </dd></dl>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
@@ -1275,8 +1319,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="accdd09720d44cc5efb1ee267706f0500" name="accdd09720d44cc5efb1ee267706f0500"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#accdd09720d44cc5efb1ee267706f0500">&#9670;&#160;</a></span>getScreeningModel()</h2>
+<a id="afab9ea03b2f6b97e9c40249ab8834107" name="afab9ea03b2f6b97e9c40249ab8834107"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afab9ea03b2f6b97e9c40249ab8834107">&#9670;&#160;</a></span>getScreeningModel()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1287,7 +1331,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a> gridfire::engine::MultiscalePartitioningEngineView::getScreeningModel </td>
           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -1300,14 +1344,14 @@ Private Attributes</h2></td></tr>
 
 <p>Gets the current electron screening model. </p>
 <dl class="section return"><dt>Returns</dt><dd>The currently active screening model type.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#accdd09720d44cc5efb1ee267706f0500" title="Gets the current electron screening model.">getScreeningModel()</a></code>. </dd></dl>
+<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#afab9ea03b2f6b97e9c40249ab8834107" title="Gets the current electron screening model.">getScreeningModel()</a></code>. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a24103027a38e02d4342161164554d332">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a60834e4bcfb2e4ec21a9cbf7bb9f7363">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a27d68f2e6c4572445cd94dc472470a01" name="a27d68f2e6c4572445cd94dc472470a01"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a27d68f2e6c4572445cd94dc472470a01">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
+<a id="a8e50f727ca6b42c27b9d5786e078ff6a" name="a8e50f727ca6b42c27b9d5786e078ff6a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8e50f727ca6b42c27b9d5786e078ff6a">&#9670;&#160;</a></span>getSpeciesDestructionTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1318,6 +1362,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::getSpeciesDestructionTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1341,6 +1390,7 @@ Private Attributes</h2></td></tr>
 <p>Computes destruction timescales for all species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -1358,12 +1408,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aefc5d0f7842b27a108ba1e4ca346e9a0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a128dd0a7f738f93092c437eeda983fdf">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="ae0c02c830cf45568a7c4d35d4ed15e95" name="ae0c02c830cf45568a7c4d35d4ed15e95"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ae0c02c830cf45568a7c4d35d4ed15e95">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
+<a id="acc2a6a05b5587ca4ae615bff79bc6a61" name="acc2a6a05b5587ca4ae615bff79bc6a61"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acc2a6a05b5587ca4ae615bff79bc6a61">&#9670;&#160;</a></span>getSpeciesIndex()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1374,8 +1424,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">size_t gridfire::engine::MultiscalePartitioningEngineView::getSpeciesIndex </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1388,19 +1442,20 @@ Private Attributes</h2></td></tr>
 <p>Gets the index of a species in the full network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">species</td><td>The species to get the index of. </td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>The index of the species in the base engine's network.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#ae0c02c830cf45568a7c4d35d4ed15e95" title="Gets the index of a species in the full network.">getSpeciesIndex()</a></code>. </dd></dl>
+<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#acc2a6a05b5587ca4ae615bff79bc6a61" title="Gets the index of a species in the full network.">getSpeciesIndex()</a></code>. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac0f40017603e8e6887b75dc7360d7c5e">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a16bd2fae51fa738da62f2a767f6875d2">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="aec5ebaccf625e39d0fa6c1330855d008" name="aec5ebaccf625e39d0fa6c1330855d008"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aec5ebaccf625e39d0fa6c1330855d008">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
+<a id="a51abea9730a700dcffecdde9adbc0456" name="a51abea9730a700dcffecdde9adbc0456"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a51abea9730a700dcffecdde9adbc0456">&#9670;&#160;</a></span>getSpeciesStatus()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1411,8 +1466,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a> gridfire::engine::MultiscalePartitioningEngineView::getSpeciesStatus </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1425,6 +1484,7 @@ Private Attributes</h2></td></tr>
 <p>Gets the status of a species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">species</td><td>The species to query. </td></tr>
   </table>
   </dd>
@@ -1432,14 +1492,14 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>The <code><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a></code> indicating if the species is dynamic, algebraic, or not involved.</dd></dl>
 <dl class="section user"><dt>Purpose</dt><dd>To allow external queries about the role of a species in the partitioned network.</dd></dl>
 <dl class="section user"><dt>How</dt><dd>It checks for membership in <code>m_dynamic_species</code> and <code>m_algebraic_species</code> to determine the appropriate status.</dd></dl>
-<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#a7629f98050d71160fc34e5c7c0b3e959" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
+<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#af4798d726d6e9d554ec741220e31c681" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8aebefad50c1aa34207e118e92d7ccf0">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a1fefd34491959f9936b7a065fc2d6274">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a86390e410db48addfe8dbd094743c38e" name="a86390e410db48addfe8dbd094743c38e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a86390e410db48addfe8dbd094743c38e">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
+<a id="af40e016e8e0206462595ccf6281411ef" name="af40e016e8e0206462595ccf6281411ef"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af40e016e8e0206462595ccf6281411ef">&#9670;&#160;</a></span>getSpeciesTimescales()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1450,6 +1510,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::expected&lt; std::unordered_map&lt; Species, double &gt;, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::getSpeciesTimescales </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1473,6 +1538,7 @@ Private Attributes</h2></td></tr>
 <p>Computes timescales for all species in the network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -1490,56 +1556,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aef6ed91d922c0b1733fd7835e99d0efe">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a92be21f072b61fcf291559246045801f">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a1372e7a823841c819f6c1a15d38217a6" name="a1372e7a823841c819f6c1a15d38217a6"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a1372e7a823841c819f6c1a15d38217a6">&#9670;&#160;</a></span>getStoichiometryMatrixEntry()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">int gridfire::engine::MultiscalePartitioningEngineView::getStoichiometryMatrixEntry </td>
-          <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span>&#160;) const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Gets an entry from the stoichiometry matrix. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">species</td><td>Species to look up stoichiometry for. </td></tr>
-    <tr><td class="paramname">reaction</td><td><a class="el" href="classgridfire_1_1engine_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> to find. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>Stoichiometric coefficient for the species in the reaction.</dd></dl>
-<dl class="section user"><dt>Purpose</dt><dd>To query the stoichiometric relationship between a species and a reaction.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#a1372e7a823841c819f6c1a15d38217a6" title="Gets an entry from the stoichiometry matrix.">getStoichiometryMatrixEntry()</a></code>.</dd></dl>
-<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#a552fa7e1f4e066fa577c55500e782014" title="Generates the stoichiometry matrix for the network.">generateStoichiometryMatrix()</a></code> must have been called. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a5ce6ff370e3f0964c6b2688fb3f4bb7e">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="ae7f2939150a5ed84e51028c8ebd83d17" name="ae7f2939150a5ed84e51028c8ebd83d17"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ae7f2939150a5ed84e51028c8ebd83d17">&#9670;&#160;</a></span>group_is_a_qse_cluster()</h2>
+<a id="aaa3e3f630482996d96775448727d124b" name="aaa3e3f630482996d96775448727d124b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aaa3e3f630482996d96775448727d124b">&#9670;&#160;</a></span>group_is_a_qse_cluster()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1550,6 +1572,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::pair&lt; bool, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::group_is_a_qse_cluster </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1577,8 +1604,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a6adac01afdd51cb3660e38731afbd265" name="a6adac01afdd51cb3660e38731afbd265"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6adac01afdd51cb3660e38731afbd265">&#9670;&#160;</a></span>group_is_a_qse_pipeline()</h2>
+<a id="a23315ce30a2adc95dafdc70d469ae3e8" name="a23315ce30a2adc95dafdc70d469ae3e8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a23315ce30a2adc95dafdc70d469ae3e8">&#9670;&#160;</a></span>group_is_a_qse_pipeline()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1589,6 +1616,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">bool gridfire::engine::MultiscalePartitioningEngineView::group_is_a_qse_pipeline </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1616,8 +1648,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a72d813f71b378dfd6f632e6b9adf1cc5" name="a72d813f71b378dfd6f632e6b9adf1cc5"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a72d813f71b378dfd6f632e6b9adf1cc5">&#9670;&#160;</a></span>identifyMeanSlowestPool()</h2>
+<a id="a496aec9ae2ac6e5fc7839e7d6c44f244" name="a496aec9ae2ac6e5fc7839e7d6c44f244"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a496aec9ae2ac6e5fc7839e7d6c44f244">&#9670;&#160;</a></span>identifyMeanSlowestPool()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1628,6 +1660,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">size_t gridfire::engine::MultiscalePartitioningEngineView::identifyMeanSlowestPool </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; std::vector&lt; fourdst::atomic::Species &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>pools</em></span>, </td>
         </tr>
         <tr>
@@ -1656,6 +1693,7 @@ Private Attributes</h2></td></tr>
 <p>Identifies the pool with the slowest mean timescale. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">pools</td><td>A vector of vectors of species indices, where each inner vector represents a timescale pool. </td></tr>
     <tr><td class="paramname">comp</td><td>Vector of current molar abundances for the full network. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -1669,24 +1707,37 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="ad8615cd1f4b78ec1c1448c96c54913e4" name="ad8615cd1f4b78ec1c1448c96c54913e4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad8615cd1f4b78ec1c1448c96c54913e4">&#9670;&#160;</a></span>involvesSpecies()</h2>
+<a id="a3f545c702d7c905f0158099009f8b5a6" name="a3f545c702d7c905f0158099009f8b5a6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3f545c702d7c905f0158099009f8b5a6">&#9670;&#160;</a></span>involvesSpecies()</h2>
 
 <div class="memitem">
 <div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
       <table class="memname">
         <tr>
           <td class="memname">bool gridfire::engine::MultiscalePartitioningEngineView::involvesSpecies </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;)</td>
         </tr>
       </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span></span>  </td>
+  </tr>
+</table>
 </div><div class="memdoc">
 
 <p>Checks if a species is involved in the partitioned network. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">species</td><td>The species to check. </td></tr>
   </table>
   </dd>
@@ -1694,28 +1745,41 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd><code>true</code> if the species is in either the dynamic or algebraic sets, <code>false</code> otherwise.</dd></dl>
 <dl class="section user"><dt>Purpose</dt><dd>To allow external queries about species involvement in the partitioned network.</dd></dl>
 <dl class="section user"><dt>How</dt><dd>It checks for membership in both <code>m_dynamic_species</code> and <code>m_algebraic_species</code>.</dd></dl>
-<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#a7629f98050d71160fc34e5c7c0b3e959" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
+<dl class="section pre"><dt>Precondition</dt><dd><code><a class="el" href="#af4798d726d6e9d554ec741220e31c681" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> must have been called. </dd></dl>
 
 </div>
 </div>
-<a id="aa55fe8b346dca4a06027acac9a2547a3" name="aa55fe8b346dca4a06027acac9a2547a3"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa55fe8b346dca4a06027acac9a2547a3">&#9670;&#160;</a></span>involvesSpeciesInDynamic()</h2>
+<a id="aead8b6b6d3aa580084b3ab39f5126e77" name="aead8b6b6d3aa580084b3ab39f5126e77"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aead8b6b6d3aa580084b3ab39f5126e77">&#9670;&#160;</a></span>involvesSpeciesInDynamic()</h2>
 
 <div class="memitem">
 <div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
       <table class="memname">
         <tr>
           <td class="memname">bool gridfire::engine::MultiscalePartitioningEngineView::involvesSpeciesInDynamic </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;)</td>
         </tr>
       </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span></span>  </td>
+  </tr>
+</table>
 </div><div class="memdoc">
 
 <p>Check if a species is involved in the dynamic set. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">species</td><td>The species to check. </td></tr>
   </table>
   </dd>
@@ -1724,24 +1788,37 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a4476e65dd6ce8700f5163ff7b29185e4" name="a4476e65dd6ce8700f5163ff7b29185e4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a4476e65dd6ce8700f5163ff7b29185e4">&#9670;&#160;</a></span>involvesSpeciesInQSE()</h2>
+<a id="a2f8e26e75c3d39de978004370b04c451" name="a2f8e26e75c3d39de978004370b04c451"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2f8e26e75c3d39de978004370b04c451">&#9670;&#160;</a></span>involvesSpeciesInQSE()</h2>
 
 <div class="memitem">
 <div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
       <table class="memname">
         <tr>
           <td class="memname">bool gridfire::engine::MultiscalePartitioningEngineView::involvesSpeciesInQSE </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
-          <td> const</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span>&#160;)</td>
         </tr>
       </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span></span>  </td>
+  </tr>
+</table>
 </div><div class="memdoc">
 
 <p>Check if a species is involved in the QSE (algebraic) set. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">species</td><td>The species to check. </td></tr>
   </table>
   </dd>
@@ -1750,83 +1827,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a10dd189ba40dbb604fdf55746b5d4b79" name="a10dd189ba40dbb604fdf55746b5d4b79"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a10dd189ba40dbb604fdf55746b5d4b79">&#9670;&#160;</a></span>isStale()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">bool gridfire::engine::MultiscalePartitioningEngineView::isStale </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Checks if the engine's internal state is stale relative to the provided conditions. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>A struct containing the current network input. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd><code>true</code> if the engine is stale, <code>false</code> otherwise.</dd></dl>
-<dl class="section user"><dt>Purpose</dt><dd>To determine if <code><a class="el" href="#a28c8ac1ec594cf55a297e3f9586e214a" title="Updates the internal state of the engine, performing partitioning and QSE equilibration.">update()</a></code> needs to be called.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>It creates a <code>QSECacheKey</code> from the <code>netIn</code> data and checks for its existence in the <code>m_qse_abundance_cache</code>. A cache miss indicates the engine is stale because it does not have a valid QSE partition for the current conditions. It also queries the base engine's <code><a class="el" href="#a10dd189ba40dbb604fdf55746b5d4b79" title="Checks if the engine&#39;s internal state is stale relative to the provided conditions.">isStale()</a></code> method. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a79423b9f67b4cac702547b4f1d8bd14c">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="aa839c3893ff9fb8e5a4187224dac7b47" name="aa839c3893ff9fb8e5a4187224dac7b47"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa839c3893ff9fb8e5a4187224dac7b47">&#9670;&#160;</a></span>mapNetInToMolarAbundanceVector()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">std::vector&lt; double &gt; gridfire::engine::MultiscalePartitioningEngineView::mapNetInToMolarAbundanceVector </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td> const</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Maps a <code><a class="el" href="structgridfire_1_1_net_in.html">NetIn</a></code> struct to a molar abundance vector for the full network. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>A struct containing the current network input. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>A vector of molar abundances corresponding to the species order in the base engine.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#aa839c3893ff9fb8e5a4187224dac7b47" title="Maps a NetIn struct to a molar abundance vector for the full network.">mapNetInToMolarAbundanceVector()</a></code>. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#aa9d55b81c1963113aad86aa60c19676f">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a4da0432598ecb0415b70b94d8300d3ef" name="a4da0432598ecb0415b70b94d8300d3ef"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a4da0432598ecb0415b70b94d8300d3ef">&#9670;&#160;</a></span>merge_coupled_groups()</h2>
+<a id="a89ccae586536ab8f13113fd366513102" name="a89ccae586536ab8f13113fd366513102"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a89ccae586536ab8f13113fd366513102">&#9670;&#160;</a></span>merge_coupled_groups()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1837,6 +1839,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">MultiscalePartitioningEngineView::QSEGroup</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::merge_coupled_groups </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">QSEGroup</a> &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>groups</em></span>, </td>
         </tr>
         <tr>
@@ -1854,8 +1861,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="aaba92340dd44399c48bc219ec63f94e2" name="aaba92340dd44399c48bc219ec63f94e2"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aaba92340dd44399c48bc219ec63f94e2">&#9670;&#160;</a></span>partitionByTimescale()</h2>
+<a id="ab21446291370ae1d330c7256733c0dd0" name="ab21446291370ae1d330c7256733c0dd0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab21446291370ae1d330c7256733c0dd0">&#9670;&#160;</a></span>partitionByTimescale()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1866,6 +1873,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; std::vector&lt; Species &gt; &gt; gridfire::engine::MultiscalePartitioningEngineView::partitionByTimescale </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -1889,6 +1901,7 @@ Private Attributes</h2></td></tr>
 <p>Partitions the network by timescale. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>Vector of current molar abundances for all species. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -1901,8 +1914,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a7629f98050d71160fc34e5c7c0b3e959" name="a7629f98050d71160fc34e5c7c0b3e959"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a7629f98050d71160fc34e5c7c0b3e959">&#9670;&#160;</a></span>partitionNetwork()</h2>
+<a id="af4798d726d6e9d554ec741220e31c681" name="af4798d726d6e9d554ec741220e31c681"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af4798d726d6e9d554ec741220e31c681">&#9670;&#160;</a></span>partitionNetwork()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1910,8 +1923,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">fourdst::composition::Composition gridfire::engine::MultiscalePartitioningEngineView::partitionNetwork </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -1919,6 +1936,7 @@ Private Attributes</h2></td></tr>
 <p>Partitions the network based on timescales from a <code><a class="el" href="structgridfire_1_1_net_in.html">NetIn</a></code> struct. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">netIn</td><td>A struct containing the current network input.</td></tr>
   </table>
   </dd>
@@ -1928,8 +1946,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="afabb6222bd6cbe3277b6c8639203be25" name="afabb6222bd6cbe3277b6c8639203be25"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#afabb6222bd6cbe3277b6c8639203be25">&#9670;&#160;</a></span>primeEngine()</h2>
+<a id="a5dff14dcced4b23c42a72108b796e783" name="a5dff14dcced4b23c42a72108b796e783"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5dff14dcced4b23c42a72108b796e783">&#9670;&#160;</a></span>primeEngine()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -1940,8 +1958,12 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a> gridfire::engine::MultiscalePartitioningEngineView::primeEngine </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
         </tr>
       </table>
   </td>
@@ -1960,14 +1982,66 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A <code><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" title="Captures the result of a network priming operation.">PrimingReport</a></code> struct containing information about the priming process.</dd></dl>
 <dl class="section user"><dt>Purpose</dt><dd>To prepare the network for ignition or specific pathway studies.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#afabb6222bd6cbe3277b6c8639203be25" title="Primes the engine with a specific species.">primeEngine()</a></code>. The multiscale view does not currently interact with the priming process. </dd></dl>
+<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#a5dff14dcced4b23c42a72108b796e783" title="Primes the engine with a specific species.">primeEngine()</a></code>. The multiscale view does not currently interact with the priming process. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a70e270bb50910c0055a75575c1ef1e95">gridfire::engine::DynamicEngine</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a30df09678c3de1a55b7c6ac5eae35004">gridfire::engine::DynamicEngine</a>.</p>
 
 </div>
 </div>
-<a id="a601a4fb916f003c9ff7cf000a8006bab" name="a601a4fb916f003c9ff7cf000a8006bab"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a601a4fb916f003c9ff7cf000a8006bab">&#9670;&#160;</a></span>pruneValidatedGroups()</h2>
+<a id="a063c097e6afdadabbb79fabd61b21d0b" name="a063c097e6afdadabbb79fabd61b21d0b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a063c097e6afdadabbb79fabd61b21d0b">&#9670;&#160;</a></span>project()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">fourdst::composition::Composition gridfire::engine::MultiscalePartitioningEngineView::project </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Updates the internal state of the engine, performing partitioning and QSE equilibration. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
+    <tr><td class="paramname">netIn</td><td>A struct containing the current network input: temperature, density, and composition. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>The new composition after QSE species have been brought to equilibrium.</dd></dl>
+<dl class="section user"><dt>Purpose</dt><dd>This is the main entry point for preparing the multiscale engine for use. It triggers the network partitioning and solves for the initial QSE abundances, caching the result.</dd></dl>
+<p>@how</p><ol type="1">
+<li>It first checks the QSE cache. If a valid entry already exists for the input state, it returns the input composition, as no work is needed.</li>
+<li>If the cache misses, it calls <code>equilibrateNetwork()</code>.</li>
+<li><code>equilibrateNetwork()</code> in turn calls <code><a class="el" href="#af4798d726d6e9d554ec741220e31c681" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> to define the dynamic and algebraic species sets.</li>
+<li>It then calls <code><a class="el" href="#adcc3bd5427974ecc3e1b2af60f948186" title="Solves for the QSE abundances of the algebraic species in a given state.">solveQSEAbundances()</a></code> to compute the equilibrium abundances.</li>
+<li>The resulting equilibrium abundances for the algebraic species are stored in the <code>m_qse_abundance_cache</code>.</li>
+<li>A new <code>fourdst::composition::Composition</code> object reflecting the equilibrated state is created and returned.</li>
+</ol>
+<dl class="section pre"><dt>Precondition</dt><dd>The <code>netIn</code> struct should contain a valid physical state. </dd></dl>
+<dl class="section post"><dt>Postcondition</dt><dd>The engine is partitioned (<code>m_dynamic_species</code>, <code>m_algebraic_species</code>, etc. are populated). The <code>m_qse_abundance_cache</code> is populated with the QSE solution for the given state. The returned composition reflects the new equilibrium. </dd></dl>
+
+<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a260d36cc1e14ca8eda0309745e9134d9">gridfire::engine::DynamicEngine</a>.</p>
+
+</div>
+</div>
+<a id="a32e4bc6799cc14baccf341f07da0e6b6" name="a32e4bc6799cc14baccf341f07da0e6b6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a32e4bc6799cc14baccf341f07da0e6b6">&#9670;&#160;</a></span>pruneValidatedGroups()</h2>
 
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@@ -1978,6 +2052,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">MultiscalePartitioningEngineView::QSEGroup</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::pruneValidatedGroups </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">QSEGroup</a> &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>groups</em></span>, </td>
         </tr>
         <tr>
@@ -2010,87 +2089,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="aa378d0e0fa6018b989d83945daa47952" name="aa378d0e0fa6018b989d83945daa47952"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa378d0e0fa6018b989d83945daa47952">&#9670;&#160;</a></span>setNetworkReactions()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::MultiscalePartitioningEngineView::setNetworkReactions </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Sets the set of logical reactions in the network. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">reactions</td><td>The set of logical reactions to use.</td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section user"><dt>Purpose</dt><dd>To modify the reaction network.</dd></dl>
-<dl class="section user"><dt>How</dt><dd>This operation is not supported by the <code><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html" title="An engine view that partitions the reaction network into multiple groups based on timescales.">MultiscalePartitioningEngineView</a></code> as it would invalidate the partitioning logic. It logs a critical error and throws an exception. Network modifications should be done on the base engine before it is wrapped by this view.</dd></dl>
-<dl class="exception"><dt>Exceptions</dt><dd>
-  <table class="exception">
-    <tr><td class="paramname"><a class="el" href="classgridfire_1_1exceptions_1_1_unable_to_set_network_reactions_error.html" title="Exception for failures in setting network reactions.">exceptions::UnableToSetNetworkReactionsError</a></td><td>Always. </td></tr>
-  </table>
-  </dd>
-</dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ab321170954bffc53b1bedaf54f6976be">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="ad11aa1e168ec03d0c3ed90eeddcefe52" name="ad11aa1e168ec03d0c3ed90eeddcefe52"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad11aa1e168ec03d0c3ed90eeddcefe52">&#9670;&#160;</a></span>setScreeningModel()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::engine::MultiscalePartitioningEngineView::setScreeningModel </td>
-          <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">screening::ScreeningType</a></td>          <td class="paramname"><span class="paramname"><em>model</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Sets the electron screening model. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">model</td><td>The type of screening model to use for reaction rate calculations.</td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section user"><dt>How</dt><dd>This method delegates directly to the base engine's <code><a class="el" href="#ad11aa1e168ec03d0c3ed90eeddcefe52" title="Sets the electron screening model.">setScreeningModel()</a></code>. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a50e76977d0dc3cc23d52b51842d35003">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="a6c785a6334e5fd9593d3e279bafee592" name="a6c785a6334e5fd9593d3e279bafee592"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6c785a6334e5fd9593d3e279bafee592">&#9670;&#160;</a></span>solveQSEAbundances()</h2>
+<a id="adcc3bd5427974ecc3e1b2af60f948186" name="adcc3bd5427974ecc3e1b2af60f948186"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adcc3bd5427974ecc3e1b2af60f948186">&#9670;&#160;</a></span>solveQSEAbundances()</h2>
 
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@@ -2101,6 +2101,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">fourdst::composition::Composition gridfire::engine::MultiscalePartitioningEngineView::solveQSEAbundances </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
@@ -2111,7 +2116,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;) const -&gt; fourdst::composition::Composition</td>
         </tr>
       </table>
   </td>
@@ -2124,6 +2129,7 @@ Private Attributes</h2></td></tr>
 <p>Solves for the QSE abundances of the algebraic species in a given state. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">comp</td><td>Vector of current molar abundances for all species in the base engine. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
     <tr><td class="paramname">rho</td><td>Density in g/cm^3. </td></tr>
@@ -2138,55 +2144,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a28c8ac1ec594cf55a297e3f9586e214a" name="a28c8ac1ec594cf55a297e3f9586e214a"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a28c8ac1ec594cf55a297e3f9586e214a">&#9670;&#160;</a></span>update()</h2>
-
-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">fourdst::composition::Composition gridfire::engine::MultiscalePartitioningEngineView::update </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span></td><td>)</td>
-          <td></td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Updates the internal state of the engine, performing partitioning and QSE equilibration. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">netIn</td><td>A struct containing the current network input: temperature, density, and composition. </td></tr>
-  </table>
-  </dd>
-</dl>
-<dl class="section return"><dt>Returns</dt><dd>The new composition after QSE species have been brought to equilibrium.</dd></dl>
-<dl class="section user"><dt>Purpose</dt><dd>This is the main entry point for preparing the multiscale engine for use. It triggers the network partitioning and solves for the initial QSE abundances, caching the result.</dd></dl>
-<p>@how</p><ol type="1">
-<li>It first checks the QSE cache. If a valid entry already exists for the input state, it returns the input composition, as no work is needed.</li>
-<li>If the cache misses, it calls <code>equilibrateNetwork()</code>.</li>
-<li><code>equilibrateNetwork()</code> in turn calls <code><a class="el" href="#a7629f98050d71160fc34e5c7c0b3e959" title="Partitions the network based on timescales from a NetIn struct.">partitionNetwork()</a></code> to define the dynamic and algebraic species sets.</li>
-<li>It then calls <code><a class="el" href="#a6c785a6334e5fd9593d3e279bafee592" title="Solves for the QSE abundances of the algebraic species in a given state.">solveQSEAbundances()</a></code> to compute the equilibrium abundances.</li>
-<li>The resulting equilibrium abundances for the algebraic species are stored in the <code>m_qse_abundance_cache</code>.</li>
-<li>A new <code>fourdst::composition::Composition</code> object reflecting the equilibrated state is created and returned.</li>
-</ol>
-<dl class="section pre"><dt>Precondition</dt><dd>The <code>netIn</code> struct should contain a valid physical state. </dd></dl>
-<dl class="section post"><dt>Postcondition</dt><dd>The engine is partitioned (<code>m_dynamic_species</code>, <code>m_algebraic_species</code>, etc. are populated). The <code>m_qse_abundance_cache</code> is populated with the QSE solution for the given state. The returned composition reflects the new equilibrium. </dd></dl>
-
-<p>Implements <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a8dd85442ec54f20d91743c72364e36ff">gridfire::engine::DynamicEngine</a>.</p>
-
-</div>
-</div>
-<a id="acf5cfbd18ebb2566f637cb176f861423" name="acf5cfbd18ebb2566f637cb176f861423"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#acf5cfbd18ebb2566f637cb176f861423">&#9670;&#160;</a></span>validateGroupsWithFluxAnalysis()</h2>
+<a id="aa449a5eadf14462e4ff270ed62c63fab" name="aa449a5eadf14462e4ff270ed62c63fab"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa449a5eadf14462e4ff270ed62c63fab">&#9670;&#160;</a></span>validateGroupsWithFluxAnalysis()</h2>
 
 <div class="memitem">
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@@ -2197,6 +2156,11 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_flux_validation_result.html">MultiscalePartitioningEngineView::FluxValidationResult</a> gridfire::engine::MultiscalePartitioningEngineView::validateGroupsWithFluxAnalysis </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::vector&lt; <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">QSEGroup</a> &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>candidate_groups</em></span>, </td>
         </tr>
         <tr>
@@ -2225,6 +2189,7 @@ Private Attributes</h2></td></tr>
 <p>Validates candidate QSE groups using flux analysis. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>The scratch data for thread-local storage. </td></tr>
     <tr><td class="paramname">candidate_groups</td><td>A vector of candidate QSE groups. </td></tr>
     <tr><td class="paramname">comp</td><td>Vector of current molar abundances for the full network. </td></tr>
     <tr><td class="paramname">T9</td><td>Temperature in units of 10^9 K. </td></tr>
@@ -2239,102 +2204,6 @@ Private Attributes</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Data Documentation</h2>
-<a id="ab6c4cddda054dfa35f6e0a083015dc9d" name="ab6c4cddda054dfa35f6e0a083015dc9d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ab6c4cddda054dfa35f6e0a083015dc9d">&#9670;&#160;</a></span>m_activeReactionIndices</h2>
-
-<div class="memitem">
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-  <td class="mlabels-left">
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-          <td class="memname">std::vector&lt;size_t&gt; gridfire::engine::MultiscalePartitioningEngineView::m_activeReactionIndices</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Indices of all reactions involving only active species. </p>
-
-</div>
-</div>
-<a id="a40ddd53c7f5482237e4bad38525ee100" name="a40ddd53c7f5482237e4bad38525ee100"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a40ddd53c7f5482237e4bad38525ee100">&#9670;&#160;</a></span>m_activeSpeciesIndices</h2>
-
-<div class="memitem">
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-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
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-          <td class="memname">std::vector&lt;size_t&gt; gridfire::engine::MultiscalePartitioningEngineView::m_activeSpeciesIndices</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Indices of all species considered active in the current partition (dynamic + algebraic). </p>
-
-</div>
-</div>
-<a id="abcf6a7ba929fe4c45e2a4deeb2bfca82" name="abcf6a7ba929fe4c45e2a4deeb2bfca82"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#abcf6a7ba929fe4c45e2a4deeb2bfca82">&#9670;&#160;</a></span>m_algebraic_abundances</h2>
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-          <td class="memname">std::unordered_map&lt;fourdst::atomic::Species, double&gt; gridfire::engine::MultiscalePartitioningEngineView::m_algebraic_abundances</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Map from species to their calculated abundances in the QSE state. </p>
-
-</div>
-</div>
-<a id="aac8ac0afe8fd443b661d849e9b1b5e72" name="aac8ac0afe8fd443b661d849e9b1b5e72"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aac8ac0afe8fd443b661d849e9b1b5e72">&#9670;&#160;</a></span>m_algebraic_species</h2>
-
-<div class="memitem">
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-          <td class="memname">std::vector&lt;fourdst::atomic::Species&gt; gridfire::engine::MultiscalePartitioningEngineView::m_algebraic_species</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>Species that are treated as algebraic (in QSE) in the QSE groups. </p>
-
-</div>
-</div>
 <a id="a460e8e46d38b81efa510714a3375f674" name="a460e8e46d38b81efa510714a3375f674"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#a460e8e46d38b81efa510714a3375f674">&#9670;&#160;</a></span>m_baseEngine</h2>
 
@@ -2357,52 +2226,6 @@ Private Attributes</h2></td></tr>
 
 <p>The base engine to which this view delegates calculations. </p>
 
-</div>
-</div>
-<a id="a38b0eb7e7e454e001254aa823b1ec3f7" name="a38b0eb7e7e454e001254aa823b1ec3f7"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a38b0eb7e7e454e001254aa823b1ec3f7">&#9670;&#160;</a></span>m_composition_cache</h2>
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-  <td class="mlabels-left">
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-          <td class="memname">std::unordered_map&lt;uint64_t, fourdst::composition::Composition&gt; gridfire::engine::MultiscalePartitioningEngineView::m_composition_cache</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-</div>
-</div>
-<a id="a69baf327ba82f923859c569bc4d76ee8" name="a69baf327ba82f923859c569bc4d76ee8"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a69baf327ba82f923859c569bc4d76ee8">&#9670;&#160;</a></span>m_dynamic_species</h2>
-
-<div class="memitem">
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-  <td class="mlabels-left">
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-          <td class="memname">std::vector&lt;fourdst::atomic::Species&gt; gridfire::engine::MultiscalePartitioningEngineView::m_dynamic_species</td>
-        </tr>
-      </table>
-  </td>
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-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
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-<p>The simplified set of species presented to the solver (the "slow" species). </p>
-
 </div>
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@@ -2427,76 +2250,6 @@ Private Attributes</h2></td></tr>
 
 <p>Logger instance for logging messages. </p>
 
-</div>
-</div>
-<a id="a36ccf1d3b4cefba461acddcb238f27a5" name="a36ccf1d3b4cefba461acddcb238f27a5"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a36ccf1d3b4cefba461acddcb238f27a5">&#9670;&#160;</a></span>m_qse_groups</h2>
-
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-  <tr>
-  <td class="mlabels-left">
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-          <td class="memname">std::vector&lt;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">QSEGroup</a>&gt; gridfire::engine::MultiscalePartitioningEngineView::m_qse_groups</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
-</div><div class="memdoc">
-
-<p>The list of identified equilibrium groups. </p>
-
-</div>
-</div>
-<a id="a3d0cde126563adc97b998bade1132603" name="a3d0cde126563adc97b998bade1132603"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a3d0cde126563adc97b998bade1132603">&#9670;&#160;</a></span>m_qse_solvers</h2>
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-<div class="memitem">
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-  <tr>
-  <td class="mlabels-left">
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-          <td class="memname">std::vector&lt;std::unique_ptr&lt;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">QSESolver</a>&gt; &gt; gridfire::engine::MultiscalePartitioningEngineView::m_qse_solvers</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
-</table>
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-<p>A set of solvers, one for each QSE group. </p>
-
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-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
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-
 </div>
 </div>
 <hr/>The documentation for this class was generated from the following files:<ul>
diff --git a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.js b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.js
index 9ed8d39e..a3ce8cf8 100644
--- a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.js
+++ b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.js
@@ -5,58 +5,44 @@ var classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view =
     [ "QSESolver", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver" ],
     [ "QSEPartition", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a892741542388166db4dc55631567ee0a", null ],
     [ "MultiscalePartitioningEngineView", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0a500b19283ad3dd654ca4c4646b2604", null ],
-    [ "~MultiscalePartitioningEngineView", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae553a4d590c0cfae5591bcd8bbe6f9d3", null ],
-    [ "analyzeTimescalePoolConnectivity", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8d4153f520b486dbb262888e22b95896", null ],
-    [ "buildConnectivityGraph", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a35482c1d5f1d2b3f2cd6c3976432644e", null ],
-    [ "calculateEpsDerivatives", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ac720fcea2f0304c3d7e7ba8a6dfb84da", null ],
-    [ "calculateMolarReactionFlow", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af030c9bd6a95686a09429b4619ad188c", null ],
-    [ "calculateRHSAndEnergy", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa960005503d18066015aef280680d616", null ],
-    [ "collectComposition", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a97d9616558f681ad010ee452394f3519", null ],
-    [ "constructCandidateGroups", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a28502c9e8fc0a40211fd3717c2b67214", null ],
-    [ "exportToDot", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#accbf5a67f126627833a4169a81f1be01", null ],
-    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8950fb9c0c36684538805de4f0acf82e", null ],
-    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a64b6e7e5794cc42edf72899d348d15af", null ],
-    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aae6c00cff4f7a992513d1e9481436f8f", null ],
-    [ "generateStoichiometryMatrix", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a552fa7e1f4e066fa577c55500e782014", null ],
+    [ "analyzeTimescalePoolConnectivity", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afbf1e0c56ea1cd9b41aba49c9db692f5", null ],
+    [ "buildConnectivityGraph", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6d0f041d32f00a8bdce97f9400ddf56f", null ],
+    [ "calculateEpsDerivatives", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a1e6fe11b37d5ef6da00ec36d06ebc957", null ],
+    [ "calculateMolarReactionFlow", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0ef7edd271cec2b1b0e74b828ee25dba", null ],
+    [ "calculateRHSAndEnergy", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add1058c32fbd02f5583cfda4cc60985c", null ],
+    [ "collectComposition", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5c7669454b986ed20db8387e5724b2b0", null ],
+    [ "constructCandidateGroups", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0dd152322195c160c73b8d0821e83471", null ],
+    [ "constructStateBlob", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a80dc129ae2fc3dd2f1d82e123e7cda3f", null ],
+    [ "exportToDot", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0408236605abd9c1a9fcb3094a8ebf70", null ],
+    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#adb4206971c774362ca4a92acae64c0a8", null ],
+    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad515fb9edfe551329ded487d43257745", null ],
+    [ "generateJacobianMatrix", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae8be625f7535f2957a5de7b525020388", null ],
     [ "getBaseEngine", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad80faf5bea2153480cbfb323ed805686", null ],
-    [ "getDynamicSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a7d2f445ae7b75d4cd879afb6e960e0f7", null ],
-    [ "getFastSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aebb0977daa8c6a9c496f0f989f950fae", null ],
-    [ "getNetworkReactions", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9dc9de4359beb704b94024f159ae619d", null ],
-    [ "getNetworkSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa7aa38cf054988d050c04c59f28efdaa", null ],
-    [ "getNormalizedEquilibratedComposition", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6fc4cb156a287f579cb0f0c5d88d74d0", null ],
-    [ "getScreeningModel", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#accdd09720d44cc5efb1ee267706f0500", null ],
-    [ "getSpeciesDestructionTimescales", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a27d68f2e6c4572445cd94dc472470a01", null ],
-    [ "getSpeciesIndex", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae0c02c830cf45568a7c4d35d4ed15e95", null ],
-    [ "getSpeciesStatus", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aec5ebaccf625e39d0fa6c1330855d008", null ],
-    [ "getSpeciesTimescales", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a86390e410db48addfe8dbd094743c38e", null ],
-    [ "getStoichiometryMatrixEntry", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a1372e7a823841c819f6c1a15d38217a6", null ],
-    [ "group_is_a_qse_cluster", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ae7f2939150a5ed84e51028c8ebd83d17", null ],
-    [ "group_is_a_qse_pipeline", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6adac01afdd51cb3660e38731afbd265", null ],
-    [ "identifyMeanSlowestPool", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a72d813f71b378dfd6f632e6b9adf1cc5", null ],
-    [ "involvesSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad8615cd1f4b78ec1c1448c96c54913e4", null ],
-    [ "involvesSpeciesInDynamic", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa55fe8b346dca4a06027acac9a2547a3", null ],
-    [ "involvesSpeciesInQSE", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a4476e65dd6ce8700f5163ff7b29185e4", null ],
-    [ "isStale", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a10dd189ba40dbb604fdf55746b5d4b79", null ],
-    [ "mapNetInToMolarAbundanceVector", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa839c3893ff9fb8e5a4187224dac7b47", null ],
-    [ "merge_coupled_groups", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a4da0432598ecb0415b70b94d8300d3ef", null ],
-    [ "partitionByTimescale", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aaba92340dd44399c48bc219ec63f94e2", null ],
-    [ "partitionNetwork", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a7629f98050d71160fc34e5c7c0b3e959", null ],
-    [ "primeEngine", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afabb6222bd6cbe3277b6c8639203be25", null ],
-    [ "pruneValidatedGroups", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a601a4fb916f003c9ff7cf000a8006bab", null ],
-    [ "setNetworkReactions", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa378d0e0fa6018b989d83945daa47952", null ],
-    [ "setScreeningModel", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ad11aa1e168ec03d0c3ed90eeddcefe52", null ],
-    [ "solveQSEAbundances", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6c785a6334e5fd9593d3e279bafee592", null ],
-    [ "update", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a28c8ac1ec594cf55a297e3f9586e214a", null ],
-    [ "validateGroupsWithFluxAnalysis", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#acf5cfbd18ebb2566f637cb176f861423", null ],
-    [ "m_activeReactionIndices", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ab6c4cddda054dfa35f6e0a083015dc9d", null ],
-    [ "m_activeSpeciesIndices", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a40ddd53c7f5482237e4bad38525ee100", null ],
-    [ "m_algebraic_abundances", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#abcf6a7ba929fe4c45e2a4deeb2bfca82", null ],
-    [ "m_algebraic_species", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aac8ac0afe8fd443b661d849e9b1b5e72", null ],
+    [ "getDynamicSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ab321a6bbd96cf41e2fafdf73169f882a", null ],
+    [ "getFastSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a11b430d8fb34a7ad934a9880c207c9ef", null ],
+    [ "getMostRecentRHSCalculation", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9eeedbcf35b6cb0341a51ba1dddc97fe", null ],
+    [ "getNetworkReactions", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ac2141220d0d504bb9c1cb31ce03d957e", null ],
+    [ "getNetworkSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a9a43b1fe2124333acd338acffeb2e8c7", null ],
+    [ "getNormalizedEquilibratedComposition", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a3672842614caa53cd2e0aacb4d6042e5", null ],
+    [ "getScreeningModel", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afab9ea03b2f6b97e9c40249ab8834107", null ],
+    [ "getSpeciesDestructionTimescales", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a8e50f727ca6b42c27b9d5786e078ff6a", null ],
+    [ "getSpeciesIndex", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#acc2a6a05b5587ca4ae615bff79bc6a61", null ],
+    [ "getSpeciesStatus", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a51abea9730a700dcffecdde9adbc0456", null ],
+    [ "getSpeciesTimescales", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af40e016e8e0206462595ccf6281411ef", null ],
+    [ "group_is_a_qse_cluster", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aaa3e3f630482996d96775448727d124b", null ],
+    [ "group_is_a_qse_pipeline", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a23315ce30a2adc95dafdc70d469ae3e8", null ],
+    [ "identifyMeanSlowestPool", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a496aec9ae2ac6e5fc7839e7d6c44f244", null ],
+    [ "involvesSpecies", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a3f545c702d7c905f0158099009f8b5a6", null ],
+    [ "involvesSpeciesInDynamic", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aead8b6b6d3aa580084b3ab39f5126e77", null ],
+    [ "involvesSpeciesInQSE", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a2f8e26e75c3d39de978004370b04c451", null ],
+    [ "merge_coupled_groups", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a89ccae586536ab8f13113fd366513102", null ],
+    [ "partitionByTimescale", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#ab21446291370ae1d330c7256733c0dd0", null ],
+    [ "partitionNetwork", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#af4798d726d6e9d554ec741220e31c681", null ],
+    [ "primeEngine", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5dff14dcced4b23c42a72108b796e783", null ],
+    [ "project", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a063c097e6afdadabbb79fabd61b21d0b", null ],
+    [ "pruneValidatedGroups", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a32e4bc6799cc14baccf341f07da0e6b6", null ],
+    [ "solveQSEAbundances", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#adcc3bd5427974ecc3e1b2af60f948186", null ],
+    [ "validateGroupsWithFluxAnalysis", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa449a5eadf14462e4ff270ed62c63fab", null ],
     [ "m_baseEngine", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a460e8e46d38b81efa510714a3375f674", null ],
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-    [ "m_dynamic_species", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a69baf327ba82f923859c569bc4d76ee8", null ],
-    [ "m_logger", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add096961cacfa9206ae5227d4f3a3c36", null ],
-    [ "m_qse_groups", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a36ccf1d3b4cefba461acddcb238f27a5", null ],
-    [ "m_qse_solvers", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a3d0cde126563adc97b998bade1132603", null ],
-    [ "m_sun_ctx", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a76c2ce886f8774f56a2ee9e0ae1b9893", null ]
+    [ "m_logger", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add096961cacfa9206ae5227d4f3a3c36", null ]
 ];
\ No newline at end of file
diff --git a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver-members.html b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver-members.html
index e5f8e79a..ac4888b7 100644
--- a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,6 +105,8 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_multiscale_partitioning_en
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a>, including all inherited members.</p>
 <table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a25d2fd5dc372c43afb1ffeafe08aa0fa">clone</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a0e5ab29b7bc65cfdb74adf0555733d41">clone</a>(SUNContext sun_ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></td><td class="entry"></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a8759a711c25a587877fbccdebdb9ecd9">getLogger</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a616b818685cc51e0c1926a46435cbb68">log_diagnostics</a>(const QSEGroup &amp;group, const fourdst::composition::Composition &amp;comp) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></td><td class="entry"></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a4ca611a4c787c2f79ecd3b900547fac6">m_constraints</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
@@ -125,7 +127,7 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_multiscale_partitioning_en
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+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a2f6b5cedc410cb7b60ca757dc9855426">solve</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></td><td class="entry"></td></tr>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html
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+++ b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html
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  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
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@@ -108,6 +108,8 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_multiscale_partitioning_en
   <div class="headertitle"><div class="title">gridfire::engine::MultiscalePartitioningEngineView::QSESolver Class Reference</div></div>
 </div><!--header-->
 <div class="contents">
+
+<p><code>#include &lt;engine_multiscale.h&gt;</code></p>
 <div class="dynheader">
 Collaboration diagram for gridfire::engine::MultiscalePartitioningEngineView::QSESolver:</div>
 <div class="dyncontent">
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-<tr class="separator:aa6f28cf2f5759efad7d428f6794cc151"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a0e5ab29b7bc65cfdb74adf0555733d41"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-static-methods" name="pri-static-methods"></a>
 Static Private Member Functions</h2></td></tr>
@@ -248,6 +254,40 @@ Private Attributes</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
+<a id="a25d2fd5dc372c43afb1ffeafe08aa0fa" name="a25d2fd5dc372c43afb1ffeafe08aa0fa"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a25d2fd5dc372c43afb1ffeafe08aa0fa">&#9670;&#160;</a></span>clone() <span class="overload">[1/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
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+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">MultiscalePartitioningEngineView::QSESolver</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::QSESolver::clone </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a0e5ab29b7bc65cfdb74adf0555733d41" name="a0e5ab29b7bc65cfdb74adf0555733d41"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0e5ab29b7bc65cfdb74adf0555733d41">&#9670;&#160;</a></span>clone() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
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+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">MultiscalePartitioningEngineView::QSESolver</a> &gt; gridfire::engine::MultiscalePartitioningEngineView::QSESolver::clone </td>
+          <td>(</td>
+          <td class="paramtype">SUNContext</td>          <td class="paramname"><span class="paramname"><em>sun_ctx</em></span></td><td>)</td>
+          <td> const</td>
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-<h2 class="memtitle"><span class="permalink"><a href="#aa6f28cf2f5759efad7d428f6794cc151">&#9670;&#160;</a></span>solve()</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a2f6b5cedc410cb7b60ca757dc9855426">&#9670;&#160;</a></span>solve()</h2>
 
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           <td class="memname">fourdst::composition::Composition gridfire::engine::MultiscalePartitioningEngineView::QSESolver::solve </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.js b/docs/html/classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.js
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diff --git a/docs/html/classgridfire_1_1engine_1_1_network_jacobian-members.html b/docs/html/classgridfire_1_1engine_1_1_network_jacobian-members.html
index b9acc495..78e20ea7 100644
--- a/docs/html/classgridfire_1_1engine_1_1_network_jacobian-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_network_jacobian-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1engine_1_1_network_jacobian.html b/docs/html/classgridfire_1_1engine_1_1_network_jacobian.html
index 2ea8c971..2cac9fa4 100644
--- a/docs/html/classgridfire_1_1engine_1_1_network_jacobian.html
+++ b/docs/html/classgridfire_1_1engine_1_1_network_jacobian.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view-members.html b/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view-members.html
index 9ab5ae71..c8cc175d 100644
--- a/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view-members.html
+++ b/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -105,52 +105,42 @@ $(function(){initNavTree('classgridfire_1_1engine_1_1_network_priming_engine_vie
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2a866a7ba9572d36efab8efe72a063f5">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2f0ad1febc467bce87b5c6ad29b059fb">calculateMolarReactionFlow</a>(const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a82cbef591ef1aafcb9a42e01bf38fc38">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a38191e2b3b219d348eba0109dce271c3">collect</a>(const std::vector&lt; std::string &gt; &amp;peNames)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25dc44af1a58561b665103b16abe9bbc">collectComposition</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#acaf9433246a58f2365c5bd8907cbacbb">constructPrimingReactionSet</a>(const fourdst::atomic::Species &amp;primingSpecies, const GraphEngine &amp;baseEngine) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8464c50142f34583201c4abc7fbcba36">constructReactionIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a20b54c8b13616982eddb3ae3979b842d">constructSpeciesIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ada2f326789dc8ae8305617c8d700ae05">DefinedEngineView</a>(const std::vector&lt; std::string &gt; &amp;peNames, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4d90439d99da61107d95319b970760bc">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4966f8cbc859ce2a8a465516d0c0abd0">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1de5867a0e633de0d0d96ac4fbb141e5">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af4049e5570bd143d41cab1d4005b6824">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6e0458acf7855ff6472b96801048479">calculateEpsDerivatives</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb78ba1245f5b61a29d6163c4548f6b6">calculateMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a297412202e82ab25b6fc0a8a27a433e7">calculateRHSAndEnergy</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, bool trust) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a59680b2c95412edc7d9cda939282f2e1">collect</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; std::string &gt; &amp;peNames) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4002e188995b6c203dc391f381432e5b">collectComposition</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ac407e948552378165474f0308d5fcd5f">constructPrimingReactionSet</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;primingSpecies, const GraphEngine &amp;baseEngine) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af058b09a44f30332eece13f0d4ce9d9d">constructReactionIndexMap</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a85db72e3c0a4ce59345b6b92695a5d12">constructSpeciesIndexMap</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ac126bed6dcdfa6b2888efa3a769b4490">constructStateBlob</a>(const scratch::StateBlob *blob) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ada2f326789dc8ae8305617c8d700ae05">DefinedEngineView</a>(const std::vector&lt; std::string &gt; &amp;peNames, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa7d5c9288cfe23aa4435a89210280d83">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1457e3aa9caae5d2fba17adc62f47c79">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const std::vector&lt; fourdst::atomic::Species &gt; &amp;activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a37ba76a5a0d0cb46d93df1982f196f11">generateJacobianMatrix</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho, const SparsityPattern &amp;sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab6f82ef31b99bfe8a6c4e475bcdb96f8">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac5a0def6b6af0bd93bf9057c25f048ff">getDepth</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a81732c1b2d08451849c1ddf833246892">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a0af3e1ac0314a485171f1dda39929cb4">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a413b111f6a643d7aecbae01dd0f82640">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab051d976dbecf325747d54efe7834d04">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afb3c67ce20746b9acb2766920b8f397b">getSpeciesIndex</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a65af092785759559f4697c7e66bef2e3">getSpeciesStatus</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1edda1a27247480660cf7a63410f5799">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a600dd38a6011089527024f1625130935">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &amp;species, const reaction::Reaction &amp;reaction) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a6ef3052fce2d5e4fdaec6659df64c2bc">isStale</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae8ac4dc44a6c9f3588d6dd02b39a4cc9">m_activeReactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aad986ed7c9602ba042999cf0a30ed70c">m_activeSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#add093054fe3ba60f99b04f7f3bda4ba3">m_activeSpeciesVectorCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1e46935f049537e675fb132564d6eacd">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3156dfef68cd3636f8cf7a13b5388e75">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#af5d4b8d6b11e83d57d6e08b12ce5882d">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ad78f293f31a7ff8120b85e26e5d6dcfd">m_primingSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa9a26262300b0982b847a72425dc373a">m_reactionIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a26af4be40216ee3ea5b7fff49fe7a00c">m_speciesIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a391bc4b5d946ea606cf7661955191d12">mapFullToView</a>(const std::vector&lt; double &gt; &amp;full) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa053696a7885b8e42562b2d22ee32d84">mapNetInToMolarAbundanceVector</a>(const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#aa352f3ba0e689d3f81711c17f4f67dfc">mapViewToFull</a>(const std::vector&lt; double &gt; &amp;defined) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#afa9aeb6d11645e4b9cecf56fb63b51ef">mapViewToFullReactionIndex</a>(size_t definedReactionIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ad6986fa5cda1d9ed9d4f54f444f402e8">mapViewToFullSpeciesIndex</a>(size_t definedSpeciesIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ad4eec8af1ab1f918fd4e92fac47adaf4">NetworkPrimingEngineView</a>(const std::string &amp;primingSymbol, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#a0d505b967dc3b50f6966a0110e53a6d7">NetworkPrimingEngineView</a>(const fourdst::atomic::Species &amp;primingSpecies, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a2bc32a84c9f5372587fca92f2da77595">primeEngine</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &amp;comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae89529e13f2b7fd2febcfa5af40d4666">setNetworkReactions</a>(const reaction::ReactionSet &amp;reactions) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a68bd0e51d3e127e5f9fd74fdb8180fd9">setScreeningModel</a>(screening::ScreeningType model) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1d99b55bf8e94bc2397715aa1f916733">update</a>(const NetIn &amp;netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a91ea88e43c17f99ff0d95a8f54b09cbf">validateNetworkState</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a>(scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#adc0a33fa6e9d8de3b433fef55f3a6972">getInactiveReactionMolarReactionFlow</a>(scratch::StateBlob &amp;ctx, const reaction::Reaction &amp;reaction, const fourdst::composition::CompositionAbstract &amp;comp, const double T9, const double rho) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8d2685b85a46c3979ca23db7eaa618b5">getMostRecentRHSCalculation</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#acec78c23ab9a29c6fe930cb54388e6eb">getNetworkReactions</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a8dfbe8792e112e33623cf5bf44696376">getNetworkSpecies</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a112fa152ca631af4dfd053e8689af7f5">getScreeningModel</a>(scratch::StateBlob &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a992c39d65298e3b58e529825889b7eea">getSpeciesDestructionTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a318de224195e7c953922c9f9ccfb8652">getSpeciesIndex</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ab8b22ee7d51ce5cc762759946967852c">getSpeciesStatus</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ae1d570486213d9bfc018a2f1ac3d4a21">getSpeciesTimescales</a>(scratch::StateBlob &amp;ctx, const fourdst::composition::CompositionAbstract &amp;comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a1e46935f049537e675fb132564d6eacd">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a3156dfef68cd3636f8cf7a13b5388e75">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#af5d4b8d6b11e83d57d6e08b12ce5882d">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ad78f293f31a7ff8120b85e26e5d6dcfd">m_primingSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a47fc5027c1d787319f691751a0e043c7">mapFullToView</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;full)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a189092508a38a8f78b432d9470dd2e7f">mapViewToFull</a>(scratch::StateBlob &amp;ctx, const std::vector&lt; double &gt; &amp;defined) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af184e1166e3a0a74418af17226995c74">mapViewToFullReactionIndex</a>(scratch::StateBlob &amp;ctx, size_t definedReactionIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a9d28efabfafecf32b9f7e11164856132">mapViewToFullSpeciesIndex</a>(scratch::StateBlob &amp;ctx, size_t definedSpeciesIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ab51d5a6071da28ab19a42202a08b7b00">NetworkPrimingEngineView</a>(scratch::StateBlob &amp;ctx, const std::string &amp;primingSymbol, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#a2c588afb3417158f45ca9ae64a98bd0f">NetworkPrimingEngineView</a>(scratch::StateBlob &amp;ctx, const fourdst::atomic::Species &amp;primingSpecies, GraphEngine &amp;baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">gridfire::engine::NetworkPrimingEngineView</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a25946bd58144c69152a7992dd2e093cc">primeEngine</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af52e0ce2ce80f08642c9a6dbf0adc929">project</a>(scratch::StateBlob &amp;ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
diff --git a/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view.html b/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view.html
index 096fa411..c7f7a8f8 100644
--- a/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view.html
+++ b/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -125,91 +125,76 @@ Collaboration diagram for gridfire::engine::NetworkPrimingEngineView:</div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
 Public Member Functions</h2></td></tr>
-<tr class="memitem:ad4eec8af1ab1f918fd4e92fac47adaf4" id="r_ad4eec8af1ab1f918fd4e92fac47adaf4"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad4eec8af1ab1f918fd4e92fac47adaf4">NetworkPrimingEngineView</a> (const std::string &amp;primingSymbol, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> &amp;baseEngine)</td></tr>
-<tr class="memdesc:ad4eec8af1ab1f918fd4e92fac47adaf4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs the view by looking up the priming species by symbol.  <br /></td></tr>
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-<tr class="memdesc:a0d505b967dc3b50f6966a0110e53a6d7"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs the view using an existing Species object.  <br /></td></tr>
-<tr class="separator:a0d505b967dc3b50f6966a0110e53a6d7"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab51d5a6071da28ab19a42202a08b7b00" id="r_ab51d5a6071da28ab19a42202a08b7b00"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab51d5a6071da28ab19a42202a08b7b00">NetworkPrimingEngineView</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const std::string &amp;primingSymbol, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> &amp;baseEngine)</td></tr>
+<tr class="memdesc:ab51d5a6071da28ab19a42202a08b7b00"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs the view by looking up the priming species by symbol.  <br /></td></tr>
+<tr class="separator:ab51d5a6071da28ab19a42202a08b7b00"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2c588afb3417158f45ca9ae64a98bd0f" id="r_a2c588afb3417158f45ca9ae64a98bd0f"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2c588afb3417158f45ca9ae64a98bd0f">NetworkPrimingEngineView</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const fourdst::atomic::Species &amp;primingSpecies, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> &amp;baseEngine)</td></tr>
+<tr class="memdesc:a2c588afb3417158f45ca9ae64a98bd0f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs the view using an existing Species object.  <br /></td></tr>
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+<tr class="memdesc:ab8b22ee7d51ce5cc762759946967852c inherit pub_methods_classgridfire_1_1engine_1_1_defined_engine_view"><td class="mdescLeft">&#160;</td><td class="mdescRight">Gets the status of a species in the active network.  <br /></td></tr>
+<tr class="separator:ab8b22ee7d51ce5cc762759946967852c inherit pub_methods_classgridfire_1_1engine_1_1_defined_engine_view"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a8d2685b85a46c3979ca23db7eaa618b5 inherit pub_methods_classgridfire_1_1engine_1_1_defined_engine_view"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ac126bed6dcdfa6b2888efa3a769b4490 inherit pub_methods_classgridfire_1_1engine_1_1_defined_engine_view"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine" id="r_ac87099ff654ca30a8d8224f4779e1a15"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#ac87099ff654ca30a8d8224f4779e1a15">getInactiveNetworkReactions</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx) const</td></tr>
+<tr class="memdesc:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the set of inactive reactions in the network.  <br /></td></tr>
+<tr class="separator:ac87099ff654ca30a8d8224f4779e1a15 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:adc0a33fa6e9d8de3b433fef55f3a6972 inherit pub_methods_classgridfire_1_1engine_1_1_dynamic_engine"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 <tr class="memdesc:af0ea99416c28933d364a872fc6aff556 inherit pub_methods_classgridfire_1_1engine_1_1_engine"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
@@ -221,9 +206,9 @@ Public Member Functions</h2></td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-methods" name="pri-methods"></a>
 Private Member Functions</h2></td></tr>
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-<tr class="memdesc:acaf9433246a58f2365c5bd8907cbacbb"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs the set of reaction names that involve the priming species.  <br /></td></tr>
-<tr class="separator:acaf9433246a58f2365c5bd8907cbacbb"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:ac407e948552378165474f0308d5fcd5f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs the set of reaction names that involve the priming species.  <br /></td></tr>
+<tr class="separator:ac407e948552378165474f0308d5fcd5f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
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@@ -247,8 +232,8 @@ Additional Inherited Members</h2></td></tr>
 <p>See implementation in <a class="el" href="engine__priming_8cpp.html">engine_priming.cpp</a> for details on reaction set construction.</p>
 <dl class="section note"><dt>Note</dt><dd>Throws std::runtime_error if no priming reactions are found for the species. </dd></dl>
 </div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
-<a id="ad4eec8af1ab1f918fd4e92fac47adaf4" name="ad4eec8af1ab1f918fd4e92fac47adaf4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad4eec8af1ab1f918fd4e92fac47adaf4">&#9670;&#160;</a></span>NetworkPrimingEngineView() <span class="overload">[1/2]</span></h2>
+<a id="ab51d5a6071da28ab19a42202a08b7b00" name="ab51d5a6071da28ab19a42202a08b7b00"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab51d5a6071da28ab19a42202a08b7b00">&#9670;&#160;</a></span>NetworkPrimingEngineView() <span class="overload">[1/2]</span></h2>
 
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@@ -256,6 +241,11 @@ Additional Inherited Members</h2></td></tr>
         <tr>
           <td class="memname">gridfire::engine::NetworkPrimingEngineView::NetworkPrimingEngineView </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>primingSymbol</em></span>, </td>
         </tr>
         <tr>
@@ -269,6 +259,7 @@ Additional Inherited Members</h2></td></tr>
 <p>Constructs the view by looking up the priming species by symbol. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>State Blob containing <a class="el" href="classgridfire_1_1engine_1_1_engine.html" title="Abstract base class for a reaction network engine.">Engine</a> context </td></tr>
     <tr><td class="paramname">primingSymbol</td><td>Symbol string of the species to prime. </td></tr>
     <tr><td class="paramname">baseEngine</td><td>Reference to the base <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> to wrap. </td></tr>
   </table>
@@ -286,8 +277,8 @@ Additional Inherited Members</h2></td></tr>
 
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-<h2 class="memtitle"><span class="permalink"><a href="#a0d505b967dc3b50f6966a0110e53a6d7">&#9670;&#160;</a></span>NetworkPrimingEngineView() <span class="overload">[2/2]</span></h2>
+<a id="a2c588afb3417158f45ca9ae64a98bd0f" name="a2c588afb3417158f45ca9ae64a98bd0f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2c588afb3417158f45ca9ae64a98bd0f">&#9670;&#160;</a></span>NetworkPrimingEngineView() <span class="overload">[2/2]</span></h2>
 
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@@ -295,6 +286,11 @@ Additional Inherited Members</h2></td></tr>
         <tr>
           <td class="memname">gridfire::engine::NetworkPrimingEngineView::NetworkPrimingEngineView </td>
           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>primingSpecies</em></span>, </td>
         </tr>
         <tr>
@@ -308,6 +304,7 @@ Additional Inherited Members</h2></td></tr>
 <p>Constructs the view using an existing Species object. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>State Blob containing <a class="el" href="classgridfire_1_1engine_1_1_engine.html" title="Abstract base class for a reaction network engine.">Engine</a> context </td></tr>
     <tr><td class="paramname">primingSpecies</td><td>The species object to prime. </td></tr>
     <tr><td class="paramname">baseEngine</td><td>Reference to the base <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> to wrap. </td></tr>
   </table>
@@ -325,8 +322,8 @@ Additional Inherited Members</h2></td></tr>
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-<h2 class="memtitle"><span class="permalink"><a href="#acaf9433246a58f2365c5bd8907cbacbb">&#9670;&#160;</a></span>constructPrimingReactionSet()</h2>
+<a id="ac407e948552378165474f0308d5fcd5f" name="ac407e948552378165474f0308d5fcd5f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac407e948552378165474f0308d5fcd5f">&#9670;&#160;</a></span>constructPrimingReactionSet()</h2>
 
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           <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
           <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>primingSpecies</em></span>, </td>
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 <p>Constructs the set of reaction names that involve the priming species. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td>State blob containing engine context </td></tr>
     <tr><td class="paramname">primingSpecies</td><td>Species for which to collect priming reactions. </td></tr>
     <tr><td class="paramname">baseEngine</td><td>Base engine containing the full network of reactions. </td></tr>
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index 74a182e1..75ebb653 100644
--- a/docs/html/classgridfire_1_1engine_1_1_network_priming_engine_view.js
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 var classgridfire_1_1engine_1_1_network_priming_engine_view =
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-    [ "constructPrimingReactionSet", "classgridfire_1_1engine_1_1_network_priming_engine_view.html#acaf9433246a58f2365c5bd8907cbacbb", null ],
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+<text xml:space="preserve" text-anchor="start" x="1323.12" y="-683.75" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::engine::Engine</text>
+<text xml:space="preserve" text-anchor="middle" x="1377.5" y="-672.5" font-family="Helvetica,sans-Serif" font-size="10.00">View&lt; DynamicEngine &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1542.25" y="-702.97" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_baseEngine</text>
+<text xml:space="preserve" text-anchor="middle" x="1500.25" y="-586.97" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_baseEngine</text>
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+<text xml:space="preserve" text-anchor="start" x="1560" y="-372.75" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::engine::GraphEngine</text>
+<text xml:space="preserve" text-anchor="middle" x="1623" y="-361.5" font-family="Helvetica,sans-Serif" font-size="10.00">::AtomicReverseRate</text>
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+<text xml:space="preserve" text-anchor="middle" x="1500.25" y="-404.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_engine</text>
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-<text xml:space="preserve" text-anchor="start" x="876.75" y="-636.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-614.12" font-family="Helvetica,sans-Serif" font-size="10.00"> std::string &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="876.75" y="-391.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="876.75" y="-380.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; JacobianMatrixState,</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-368.88" font-family="Helvetica,sans-Serif" font-size="10.00"> std::string &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-345.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_jacobianMatrixStateNameMap</text>
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+<text xml:space="preserve" text-anchor="middle" x="632.62" y="-373.67" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> elements</text>
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+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-273.5" font-family="Helvetica,sans-Serif" font-size="10.00">::ReactionSet</text>
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+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-339.8" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_id</text>
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+<text xml:space="preserve" text-anchor="start" x="732.88" y="-297.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-286.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string, size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="227.25" y="-348.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string&lt;</text>
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+<text xml:space="preserve" text-anchor="start" x="718.62" y="-442.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="718.62" y="-431.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; uint32_t, gridfire</text>
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+<text xml:space="preserve" text-anchor="start" x="189.75" y="-412.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; gridfire</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-249.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
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+<text xml:space="preserve" text-anchor="middle" x="1377.5" y="-359.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1012" y="-527.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-516.5" font-family="Helvetica,sans-Serif" font-size="10.00">::screening::ScreeningModel &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="876.75" y="-391.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="middle" x="266.25" y="-450.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; double &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="394.25" y="-458.07" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> rhoYe_axis</text>
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+<text xml:space="preserve" text-anchor="start" x="189.75" y="-412.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="266.25" y="-401.5" font-family="Helvetica,sans-Serif" font-size="10.00">::rates::weak::WeakRatePayload &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="728" y="-249.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
+<text xml:space="preserve" text-anchor="start" x="728" y="-238.12" font-family="Helvetica,sans-Serif" font-size="10.00">_ptr&lt; gridfire::reaction</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-226.88" font-family="Helvetica,sans-Serif" font-size="10.00">::Reaction &gt; &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="445.75" y="-219.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unique_ptr&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-208.5" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.25" y="-236" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-723.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-293.55" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionNameMap</text>
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-<text xml:space="preserve" text-anchor="start" x="739.25" y="-737" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-725.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
+<polygon fill="white" stroke="#666666" points="828.25,-203.25 731.25,-203.25 731.25,-172.75 828.25,-172.75 828.25,-203.25"/>
+<text xml:space="preserve" text-anchor="start" x="739.25" y="-189.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_set</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-178.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-241.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionHashes</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-470.74" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-258.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_reactionIDMap</text>
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-<text xml:space="preserve" text-anchor="middle" x="779.75" y="-365.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
+<polygon fill="white" stroke="#666666" points="822.25,-103.62 737.25,-103.62 737.25,-84.38 822.25,-84.38 822.25,-103.62"/>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-90.12" font-family="Helvetica,sans-Serif" font-size="10.00">std::string_view</text>
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+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-121.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-331.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-116.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-105.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; std::string_view,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-93.88" font-family="Helvetica,sans-Serif" font-size="10.00"> fourdst::atomic::Species &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="927.38" y="-356.44" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
+<text xml:space="preserve" text-anchor="middle" x="927.38" y="-87.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> keys</text>
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-<text xml:space="preserve" text-anchor="start" x="448.38" y="-371" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
-<text xml:space="preserve" text-anchor="middle" x="497.12" y="-359.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="448.38" y="-95.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::basic_string_view</text>
+<text xml:space="preserve" text-anchor="middle" x="497.12" y="-84.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; Char &gt;</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.62" y="-380" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-368.75" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-164.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; fourdst</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-153.5" font-family="Helvetica,sans-Serif" font-size="10.00">::atomic::Species &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-436.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-201.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpecies</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-142.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_networkSpeciesMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1019.12" y="-271.62" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
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-<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-249.12" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-56.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1019.12" y="-45.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; fourdst::atomic::Species,</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-33.88" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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-<text xml:space="preserve" text-anchor="middle" x="1248" y="-317.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-85.5" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_speciesToIndexMap</text>
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+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-744.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::unordered_map</text>
+<text xml:space="preserve" text-anchor="start" x="1025.12" y="-733.12" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, fourdst::atomic</text>
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+<text xml:space="preserve" text-anchor="middle" x="1229.62" y="-731.7" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_indexToSpeciesMap</text>
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-<text xml:space="preserve" text-anchor="start" x="1035.62" y="-152" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
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+<text xml:space="preserve" text-anchor="start" x="1035.62" y="-684.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::set&lt; std::pair</text>
+<text xml:space="preserve" text-anchor="middle" x="1078.38" y="-673.5" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; size_t, size_t &gt; &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="743" y="-684.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::pair&lt; size_t,</text>
+<text xml:space="preserve" text-anchor="middle" x="779.75" y="-673.5" font-family="Helvetica,sans-Serif" font-size="10.00"> size_t &gt;</text>
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+<text xml:space="preserve" text-anchor="start" x="2048" y="-415.38" font-family="Helvetica,sans-Serif" font-size="10.00">std::vector&lt; std::unique</text>
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   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222">extend</a>(const ReactionSet &amp;other)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a85314ee0dde7e12915f63237086b5eb6">get</a>(const std::string_view &amp;id) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a133ad8cca6a75d31ef8efe67801aef1b">getReactionSetSpecies</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#ad28907fc08de978461d68cc5b77a3a99">hash</a>(uint64_t seed) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a58cc2f966674442a2afce377f11efd52">get</a>(size_t index) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a133ad8cca6a75d31ef8efe67801aef1b">getReactionSetSpecies</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#ad28907fc08de978461d68cc5b77a3a99">hash</a>(uint64_t seed) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a718f228a4b4abbfe4bbb35a8fb26d6b9">m_hashCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111">m_id</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a4200939ccf088dd83c3d264df171d568">m_reactionHashes</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">gridfire::engine::ReactionSet</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
diff --git a/docs/html/classgridfire_1_1engine_1_1_reaction_set.html b/docs/html/classgridfire_1_1engine_1_1_reaction_set.html
index 4a9015f1..6387fb46 100644
--- a/docs/html/classgridfire_1_1engine_1_1_reaction_set.html
+++ b/docs/html/classgridfire_1_1engine_1_1_reaction_set.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -139,6 +139,8 @@ Public Member Functions</h2></td></tr>
 <tr class="separator:a6a4836776f5dd00158d2336e5bcc3222"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a85314ee0dde7e12915f63237086b5eb6" id="r_a85314ee0dde7e12915f63237086b5eb6"><td class="memItemLeft" align="right" valign="top">std::optional&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a85314ee0dde7e12915f63237086b5eb6">get</a> (const std::string_view &amp;id) const</td></tr>
 <tr class="separator:a85314ee0dde7e12915f63237086b5eb6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a58cc2f966674442a2afce377f11efd52" id="r_a58cc2f966674442a2afce377f11efd52"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a58cc2f966674442a2afce377f11efd52">get</a> (size_t index) const</td></tr>
+<tr class="separator:a58cc2f966674442a2afce377f11efd52"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a1177193b1e46b4e5be630028883ab8dd" id="r_a1177193b1e46b4e5be630028883ab8dd"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1177193b1e46b4e5be630028883ab8dd">remove_reaction</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;reaction)</td></tr>
 <tr class="memdesc:a1177193b1e46b4e5be630028883ab8dd"><td class="mdescLeft">&#160;</td><td class="mdescRight">Removes a reaction from the set.  <br /></td></tr>
 <tr class="separator:a1177193b1e46b4e5be630028883ab8dd"><td class="memSeparator" colspan="2">&#160;</td></tr>
@@ -207,6 +209,8 @@ Private Attributes</h2></td></tr>
 <tr class="separator:a62965c04447909462bb4f2112661ef44"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a4200939ccf088dd83c3d264df171d568" id="r_a4200939ccf088dd83c3d264df171d568"><td class="memItemLeft" align="right" valign="top">std::unordered_set&lt; size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4200939ccf088dd83c3d264df171d568">m_reactionHashes</a></td></tr>
 <tr class="separator:a4200939ccf088dd83c3d264df171d568"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a718f228a4b4abbfe4bbb35a8fb26d6b9" id="r_a718f228a4b4abbfe4bbb35a8fb26d6b9"><td class="memItemLeft" align="right" valign="top">std::optional&lt; uint64_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a718f228a4b4abbfe4bbb35a8fb26d6b9">m_hashCache</a> = std::nullopt</td></tr>
+<tr class="separator:a718f228a4b4abbfe4bbb35a8fb26d6b9"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="friends" name="friends"></a>
 Friends</h2></td></tr>
@@ -697,7 +701,7 @@ Friends</h2></td></tr>
 </div>
 </div>
 <a id="a85314ee0dde7e12915f63237086b5eb6" name="a85314ee0dde7e12915f63237086b5eb6"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a85314ee0dde7e12915f63237086b5eb6">&#9670;&#160;</a></span>get()</h2>
+<h2 class="memtitle"><span class="permalink"><a href="#a85314ee0dde7e12915f63237086b5eb6">&#9670;&#160;</a></span>get() <span class="overload">[1/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -719,6 +723,31 @@ Friends</h2></td></tr>
 </table>
 </div><div class="memdoc">
 
+</div>
+</div>
+<a id="a58cc2f966674442a2afce377f11efd52" name="a58cc2f966674442a2afce377f11efd52"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a58cc2f966674442a2afce377f11efd52">&#9670;&#160;</a></span>get() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; gridfire::reaction::ReactionSet::get </td>
+          <td>(</td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>index</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
 </div>
 </div>
 <a id="a133ad8cca6a75d31ef8efe67801aef1b" name="a133ad8cca6a75d31ef8efe67801aef1b"></a>
@@ -1023,6 +1052,28 @@ Friends</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Data Documentation</h2>
+<a id="a718f228a4b4abbfe4bbb35a8fb26d6b9" name="a718f228a4b4abbfe4bbb35a8fb26d6b9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a718f228a4b4abbfe4bbb35a8fb26d6b9">&#9670;&#160;</a></span>m_hashCache</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;uint64_t&gt; gridfire::reaction::ReactionSet::m_hashCache = std::nullopt</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
 <a id="af92e3003b2a3606b48ab857cdedc3111" name="af92e3003b2a3606b48ab857cdedc3111"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#af92e3003b2a3606b48ab857cdedc3111">&#9670;&#160;</a></span>m_id</h2>
 
diff --git a/docs/html/classgridfire_1_1engine_1_1_reaction_set.js b/docs/html/classgridfire_1_1engine_1_1_reaction_set.js
index 90c401d1..5d872a43 100644
--- a/docs/html/classgridfire_1_1engine_1_1_reaction_set.js
+++ b/docs/html/classgridfire_1_1engine_1_1_reaction_set.js
@@ -19,6 +19,7 @@ var classgridfire_1_1engine_1_1_reaction_set =
     [ "end", "classgridfire_1_1engine_1_1_reaction_set.html#a436f9c4b8f8a4e115b19728d57d8e105", null ],
     [ "extend", "classgridfire_1_1engine_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222", null ],
     [ "get", "classgridfire_1_1engine_1_1_reaction_set.html#a85314ee0dde7e12915f63237086b5eb6", null ],
+    [ "get", "classgridfire_1_1engine_1_1_reaction_set.html#a58cc2f966674442a2afce377f11efd52", null ],
     [ "getReactionSetSpecies", "classgridfire_1_1engine_1_1_reaction_set.html#a133ad8cca6a75d31ef8efe67801aef1b", null ],
     [ "hash", "classgridfire_1_1engine_1_1_reaction_set.html#ad28907fc08de978461d68cc5b77a3a99", null ],
     [ "operator!=", "classgridfire_1_1engine_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8", null ],
@@ -29,6 +30,7 @@ var classgridfire_1_1engine_1_1_reaction_set =
     [ "remove_reaction", "classgridfire_1_1engine_1_1_reaction_set.html#a1177193b1e46b4e5be630028883ab8dd", null ],
     [ "size", "classgridfire_1_1engine_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf", null ],
     [ "operator<<", "classgridfire_1_1engine_1_1_reaction_set.html#a5a5e6ed364794f872c2c819536e24c20", null ],
+    [ "m_hashCache", "classgridfire_1_1engine_1_1_reaction_set.html#a718f228a4b4abbfe4bbb35a8fb26d6b9", null ],
     [ "m_id", "classgridfire_1_1engine_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111", null ],
     [ "m_logger", "classgridfire_1_1engine_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb", null ],
     [ "m_reactionHashes", "classgridfire_1_1engine_1_1_reaction_set.html#a4200939ccf088dd83c3d264df171d568", null ],
diff --git a/docs/html/classgridfire_1_1engine_1_1scratch_1_1_state_blob-members.html b/docs/html/classgridfire_1_1engine_1_1scratch_1_1_state_blob-members.html
new file mode 100644
index 00000000..386b1071
--- /dev/null
+++ b/docs/html/classgridfire_1_1engine_1_1scratch_1_1_state_blob-members.html
@@ -0,0 +1,134 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+<meta http-equiv="X-UA-Compatible" content="IE=11"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: Member List</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
+<link href="search/search.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="search/searchdata.js"></script>
+<script type="text/javascript" src="search/search.js"></script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
+<link href="doxygen-awesome.css" rel="stylesheet" type="text/css"/>
+<link href="doxygen-awesome-sidebar-only.css" rel="stylesheet" type="text/css"/>
+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
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+<script type="text/javascript">
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+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
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+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
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+<!-- window showing the filter options -->
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+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::StateBlob Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa45357f0c368d7403306452c5ea56af0">clone_structure</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> enum name</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aad299d86d00010692f4b787fc80ae33b">error_to_string</a>(const Error error)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#acedd28277e5c6805865a9baa3991686a">get</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a21ae830b98eb7bc0fd23ca53be92133b">get</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#afee4b9a67b6ca62cfee1da9b938e9929">get</a>(const ScratchPadType type) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a21048c544d6bd83b91bcdbcfd9adf1fe">get_registered_scratchpads</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a1633fec8fc3592bdf954ee1603f5e2a8">get_status</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#af4e757cef6da5eee54fa4d7fcaeae47e">get_status_map</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a242bfdfff1f1286253a192162203ab46">initialized</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a7c2c40faa5d4a3c55f5d2d63e00377ea">MAX_SCRATCHPADS</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a327081a9f42e5ff242adacbc304638b5">scratchpad_enrolled_flags</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a386785b28d25459a616812281bb2ced5">scratchpads</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a8c998621c476665e812be930664286e6">ScratchPadStatus</a> enum name</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a69e65e83e5f3ab48edd12a27c293e074">StateBlob</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a0862bba44ed4b5ec02de440e53930567">~StateBlob</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></td><td class="entry"></td></tr>
+</table></div><!-- contents -->
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+<title>GridFire: gridfire::engine::scratch::StateBlob Class Reference</title>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="SRStatus" id="Loading">Loading...</div>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-types">Public Types</a> &#124;
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-static-methods">Static Public Member Functions</a> &#124;
+<a href="#pri-attribs">Private Attributes</a> &#124;
+<a href="#pri-static-attribs">Static Private Attributes</a> &#124;
+<a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::StateBlob Class Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Container for managing a collection of typed scratchpad instances.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;blob.h&gt;</code></p>
+<div class="dynheader">
+Collaboration diagram for gridfire::engine::scratch::StateBlob:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1engine_1_1scratch_1_1_state_blob__coll__graph.svg" width="100%" height="410"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-types" name="pub-types"></a>
+Public Types</h2></td></tr>
+<tr class="memitem:a12f7a1fcb8bd6277f91b7ee08f267bd8" id="r_a12f7a1fcb8bd6277f91b7ee08f267bd8"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> : uint8_t { <br />
+&#160;&#160;<a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8a9947eb0c928ade198f66da62d492ee67">SCRATCHPAD_NOT_FOUND</a>
+, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8a3f52f40bf851c6707b33eb8064f39e2d">SCRATCHPAD_BAD_CAST</a>
+, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3">SCRATCHPAD_NOT_INITIALIZED</a>
+, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8a979b12f243cabde3f649cc97a3713381">SCRATCHPAD_TYPE_COLLISION</a>
+, <br />
+&#160;&#160;<a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8a117580fa1f38bef6f354561f6dc499a8">SCRATCHPAD_OUT_OF_BOUNDS</a>
+, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8a048ec178b7e21c38564d5dd707e843e0">SCRATCHPAD_UNKNOWN_ERROR</a>
+<br />
+ }</td></tr>
+<tr class="memdesc:a12f7a1fcb8bd6277f91b7ee08f267bd8"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8" title="Error codes for scratchpad operations.">Error</a> codes for scratchpad operations.  <a href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">More...</a><br /></td></tr>
+<tr class="separator:a12f7a1fcb8bd6277f91b7ee08f267bd8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8c998621c476665e812be930664286e6" id="r_a8c998621c476665e812be930664286e6"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8c998621c476665e812be930664286e6">ScratchPadStatus</a> : uint8_t { <a class="el" href="#a8c998621c476665e812be930664286e6a34469de2e720bdcaf1ff759612b702a1">NOT_ENROLLED</a>
+, <a class="el" href="#a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5">ENROLLED_NOT_INITIALIZED</a>
+, <a class="el" href="#a8c998621c476665e812be930664286e6afea544f1bb246637af8e638b9b873380">ENROLLED_INITIALIZED</a>
+ }</td></tr>
+<tr class="memdesc:a8c998621c476665e812be930664286e6"><td class="mdescLeft">&#160;</td><td class="mdescRight">Status codes for scratchpad slots.  <a href="#a8c998621c476665e812be930664286e6">More...</a><br /></td></tr>
+<tr class="separator:a8c998621c476665e812be930664286e6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a69e65e83e5f3ab48edd12a27c293e074" id="r_a69e65e83e5f3ab48edd12a27c293e074"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a69e65e83e5f3ab48edd12a27c293e074">StateBlob</a> ()=default</td></tr>
+<tr class="memdesc:a69e65e83e5f3ab48edd12a27c293e074"><td class="mdescLeft">&#160;</td><td class="mdescRight">Default constructor.  <br /></td></tr>
+<tr class="separator:a69e65e83e5f3ab48edd12a27c293e074"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0862bba44ed4b5ec02de440e53930567" id="r_a0862bba44ed4b5ec02de440e53930567"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0862bba44ed4b5ec02de440e53930567">~StateBlob</a> ()=default</td></tr>
+<tr class="memdesc:a0862bba44ed4b5ec02de440e53930567"><td class="mdescLeft">&#160;</td><td class="mdescRight">Default destructor.  <br /></td></tr>
+<tr class="separator:a0862bba44ed4b5ec02de440e53930567"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa06d7bb89e67c4b6fd584d8f32a251bf" id="r_aa06d7bb89e67c4b6fd584d8f32a251bf"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX&gt; </td></tr>
+<tr class="memitem:aa06d7bb89e67c4b6fd584d8f32a251bf"><td class="memTemplItemLeft" align="right" valign="top">void&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a> ()</td></tr>
+<tr class="memdesc:aa06d7bb89e67c4b6fd584d8f32a251bf"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enroll a new scratchpad type into the blob.  <br /></td></tr>
+<tr class="separator:aa06d7bb89e67c4b6fd584d8f32a251bf"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:acedd28277e5c6805865a9baa3991686a" id="r_acedd28277e5c6805865a9baa3991686a"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX&gt; </td></tr>
+<tr class="memitem:acedd28277e5c6805865a9baa3991686a"><td class="memTemplItemLeft" align="right" valign="top">std::expected&lt; CTX *, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#acedd28277e5c6805865a9baa3991686a">get</a> () const</td></tr>
+<tr class="memdesc:acedd28277e5c6805865a9baa3991686a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a scratchpad by type.  <br /></td></tr>
+<tr class="separator:acedd28277e5c6805865a9baa3991686a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a21ae830b98eb7bc0fd23ca53be92133b" id="r_a21ae830b98eb7bc0fd23ca53be92133b"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </td></tr>
+<tr class="memitem:a21ae830b98eb7bc0fd23ca53be92133b"><td class="memTemplItemLeft" align="right" valign="top">std::expected&lt; CTX *, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#a21ae830b98eb7bc0fd23ca53be92133b">get</a> () const</td></tr>
+<tr class="memdesc:a21ae830b98eb7bc0fd23ca53be92133b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a scratchpad by type with optional initialization check.  <br /></td></tr>
+<tr class="separator:a21ae830b98eb7bc0fd23ca53be92133b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afee4b9a67b6ca62cfee1da9b938e9929" id="r_afee4b9a67b6ca62cfee1da9b938e9929"><td class="memItemLeft" align="right" valign="top">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> *, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#afee4b9a67b6ca62cfee1da9b938e9929">get</a> (const <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> type) const</td></tr>
+<tr class="memdesc:afee4b9a67b6ca62cfee1da9b938e9929"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a scratchpad by runtime <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> value.  <br /></td></tr>
+<tr class="separator:afee4b9a67b6ca62cfee1da9b938e9929"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa45357f0c368d7403306452c5ea56af0" id="r_aa45357f0c368d7403306452c5ea56af0"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa45357f0c368d7403306452c5ea56af0">clone_structure</a> () const</td></tr>
+<tr class="memdesc:aa45357f0c368d7403306452c5ea56af0"><td class="mdescLeft">&#160;</td><td class="mdescRight">Create a deep copy of this blob with all enrolled scratchpads.  <br /></td></tr>
+<tr class="separator:aa45357f0c368d7403306452c5ea56af0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a21048c544d6bd83b91bcdbcfd9adf1fe" id="r_a21048c544d6bd83b91bcdbcfd9adf1fe"><td class="memItemLeft" align="right" valign="top">std::unordered_set&lt; <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a21048c544d6bd83b91bcdbcfd9adf1fe">get_registered_scratchpads</a> () const</td></tr>
+<tr class="memdesc:a21048c544d6bd83b91bcdbcfd9adf1fe"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the set of all registered scratchpad types.  <br /></td></tr>
+<tr class="separator:a21048c544d6bd83b91bcdbcfd9adf1fe"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a242bfdfff1f1286253a192162203ab46" id="r_a242bfdfff1f1286253a192162203ab46"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX&gt; </td></tr>
+<tr class="memitem:a242bfdfff1f1286253a192162203ab46"><td class="memTemplItemLeft" align="right" valign="top">bool&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#a242bfdfff1f1286253a192162203ab46">initialized</a> () const</td></tr>
+<tr class="memdesc:a242bfdfff1f1286253a192162203ab46"><td class="mdescLeft">&#160;</td><td class="mdescRight">Check if a specific scratchpad type is initialized.  <br /></td></tr>
+<tr class="separator:a242bfdfff1f1286253a192162203ab46"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a1633fec8fc3592bdf954ee1603f5e2a8" id="r_a1633fec8fc3592bdf954ee1603f5e2a8"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX&gt; </td></tr>
+<tr class="memitem:a1633fec8fc3592bdf954ee1603f5e2a8"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="#a8c998621c476665e812be930664286e6">ScratchPadStatus</a>&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#a1633fec8fc3592bdf954ee1603f5e2a8">get_status</a> () const</td></tr>
+<tr class="memdesc:a1633fec8fc3592bdf954ee1603f5e2a8"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the status of a specific scratchpad type.  <br /></td></tr>
+<tr class="separator:a1633fec8fc3592bdf954ee1603f5e2a8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af4e757cef6da5eee54fa4d7fcaeae47e" id="r_af4e757cef6da5eee54fa4d7fcaeae47e"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a>, <a class="el" href="#a8c998621c476665e812be930664286e6">ScratchPadStatus</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af4e757cef6da5eee54fa4d7fcaeae47e">get_status_map</a> () const</td></tr>
+<tr class="memdesc:af4e757cef6da5eee54fa4d7fcaeae47e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get a map of all scratchpad types to their current status.  <br /></td></tr>
+<tr class="separator:af4e757cef6da5eee54fa4d7fcaeae47e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-static-methods" name="pub-static-methods"></a>
+Static Public Member Functions</h2></td></tr>
+<tr class="memitem:aad299d86d00010692f4b787fc80ae33b" id="r_aad299d86d00010692f4b787fc80ae33b"><td class="memItemLeft" align="right" valign="top">static std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aad299d86d00010692f4b787fc80ae33b">error_to_string</a> (const <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> error)</td></tr>
+<tr class="memdesc:aad299d86d00010692f4b787fc80ae33b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert an <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8" title="Error codes for scratchpad operations.">Error</a> enum value to a human-readable string.  <br /></td></tr>
+<tr class="separator:aad299d86d00010692f4b787fc80ae33b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
+Private Attributes</h2></td></tr>
+<tr class="memitem:a386785b28d25459a616812281bb2ced5" id="r_a386785b28d25459a616812281bb2ced5"><td class="memItemLeft" align="right" valign="top">std::array&lt; std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt;, <a class="el" href="#a7c2c40faa5d4a3c55f5d2d63e00377ea">MAX_SCRATCHPADS</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a386785b28d25459a616812281bb2ced5">scratchpads</a> {}</td></tr>
+<tr class="memdesc:a386785b28d25459a616812281bb2ced5"><td class="mdescLeft">&#160;</td><td class="mdescRight">Array of scratchpad instances indexed by <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a>.  <br /></td></tr>
+<tr class="separator:a386785b28d25459a616812281bb2ced5"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a327081a9f42e5ff242adacbc304638b5" id="r_a327081a9f42e5ff242adacbc304638b5"><td class="memItemLeft" align="right" valign="top">std::array&lt; bool, <a class="el" href="#a7c2c40faa5d4a3c55f5d2d63e00377ea">MAX_SCRATCHPADS</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a327081a9f42e5ff242adacbc304638b5">scratchpad_enrolled_flags</a> {false}</td></tr>
+<tr class="memdesc:a327081a9f42e5ff242adacbc304638b5"><td class="mdescLeft">&#160;</td><td class="mdescRight">Flags indicating which scratchpad slots have been enrolled.  <br /></td></tr>
+<tr class="separator:a327081a9f42e5ff242adacbc304638b5"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-static-attribs" name="pri-static-attribs"></a>
+Static Private Attributes</h2></td></tr>
+<tr class="memitem:a7c2c40faa5d4a3c55f5d2d63e00377ea" id="r_a7c2c40faa5d4a3c55f5d2d63e00377ea"><td class="memItemLeft" align="right" valign="top">static constexpr size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7c2c40faa5d4a3c55f5d2d63e00377ea">MAX_SCRATCHPADS</a> = static_cast&lt;size_t&gt;(<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103">ScratchPadType::_COUNT</a>)</td></tr>
+<tr class="memdesc:a7c2c40faa5d4a3c55f5d2d63e00377ea"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maximum number of scratchpad slots, derived from <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103" title="Sentinel value representing the total number of scratchpad types. Do not use as a type.">ScratchPadType::_COUNT</a>.  <br /></td></tr>
+<tr class="separator:a7c2c40faa5d4a3c55f5d2d63e00377ea"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Container for managing a collection of typed scratchpad instances. </p>
+<p><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> provides a centralized registry for scratchpads used by engines. It uses a fixed-size array indexed by <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> for O(1) access, with compile-time type safety enforced through the <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a> concept.</p>
+<p>The blob supports:</p><ul>
+<li>Enrolling new scratchpad types (one instance per type)</li>
+<li>Type-safe retrieval with optional initialization validation</li>
+<li>Runtime retrieval by <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> enum value</li>
+<li>Deep cloning for parallel execution contexts</li>
+<li>Status queries for monitoring scratchpad states</li>
+</ul>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. Each thread should have its own <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> instance. Use <a class="el" href="#aa45357f0c368d7403306452c5ea56af0" title="Create a deep copy of this blob with all enrolled scratchpads.">clone_structure()</a> to create independent copies for parallel workers. Concurrent access to the same <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> instance requires external synchronization. </dd></dl>
+</div><h2 class="groupheader">Member Enumeration Documentation</h2>
+<a id="a12f7a1fcb8bd6277f91b7ee08f267bd8" name="a12f7a1fcb8bd6277f91b7ee08f267bd8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">&#9670;&#160;</a></span>Error</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">enum class <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">gridfire::engine::scratch::StateBlob::Error</a> : uint8_t</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p><a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8" title="Error codes for scratchpad operations.">Error</a> codes for scratchpad operations. </p>
+<table class="fieldtable">
+<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="a12f7a1fcb8bd6277f91b7ee08f267bd8a9947eb0c928ade198f66da62d492ee67" name="a12f7a1fcb8bd6277f91b7ee08f267bd8a9947eb0c928ade198f66da62d492ee67"></a>SCRATCHPAD_NOT_FOUND&#160;</td><td class="fielddoc"><p>Requested scratchpad type is not enrolled. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a12f7a1fcb8bd6277f91b7ee08f267bd8a3f52f40bf851c6707b33eb8064f39e2d" name="a12f7a1fcb8bd6277f91b7ee08f267bd8a3f52f40bf851c6707b33eb8064f39e2d"></a>SCRATCHPAD_BAD_CAST&#160;</td><td class="fielddoc"><p>Dynamic cast to requested type failed. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3" name="a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3"></a>SCRATCHPAD_NOT_INITIALIZED&#160;</td><td class="fielddoc"><p>Scratchpad exists but is not initialized. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a12f7a1fcb8bd6277f91b7ee08f267bd8a979b12f243cabde3f649cc97a3713381" name="a12f7a1fcb8bd6277f91b7ee08f267bd8a979b12f243cabde3f649cc97a3713381"></a>SCRATCHPAD_TYPE_COLLISION&#160;</td><td class="fielddoc"><p>Attempted to enroll duplicate type. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a12f7a1fcb8bd6277f91b7ee08f267bd8a117580fa1f38bef6f354561f6dc499a8" name="a12f7a1fcb8bd6277f91b7ee08f267bd8a117580fa1f38bef6f354561f6dc499a8"></a>SCRATCHPAD_OUT_OF_BOUNDS&#160;</td><td class="fielddoc"><p><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> index exceeds array bounds. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a12f7a1fcb8bd6277f91b7ee08f267bd8a048ec178b7e21c38564d5dd707e843e0" name="a12f7a1fcb8bd6277f91b7ee08f267bd8a048ec178b7e21c38564d5dd707e843e0"></a>SCRATCHPAD_UNKNOWN_ERROR&#160;</td><td class="fielddoc"><p>Unspecified error condition. </p>
+</td></tr>
+</table>
+
+</div>
+</div>
+<a id="a8c998621c476665e812be930664286e6" name="a8c998621c476665e812be930664286e6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8c998621c476665e812be930664286e6">&#9670;&#160;</a></span>ScratchPadStatus</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">enum class <a class="el" href="#a8c998621c476665e812be930664286e6">gridfire::engine::scratch::StateBlob::ScratchPadStatus</a> : uint8_t</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Status codes for scratchpad slots. </p>
+<table class="fieldtable">
+<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="a8c998621c476665e812be930664286e6a34469de2e720bdcaf1ff759612b702a1" name="a8c998621c476665e812be930664286e6a34469de2e720bdcaf1ff759612b702a1"></a>NOT_ENROLLED&#160;</td><td class="fielddoc"><p>No scratchpad has been enrolled for this slot. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5" name="a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5"></a>ENROLLED_NOT_INITIALIZED&#160;</td><td class="fielddoc"><p>Scratchpad enrolled but not yet initialized. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a8c998621c476665e812be930664286e6afea544f1bb246637af8e638b9b873380" name="a8c998621c476665e812be930664286e6afea544f1bb246637af8e638b9b873380"></a>ENROLLED_INITIALIZED&#160;</td><td class="fielddoc"><p>Scratchpad enrolled and fully initialized. </p>
+</td></tr>
+</table>
+
+</div>
+</div>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a69e65e83e5f3ab48edd12a27c293e074" name="a69e65e83e5f3ab48edd12a27c293e074"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a69e65e83e5f3ab48edd12a27c293e074">&#9670;&#160;</a></span>StateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::engine::scratch::StateBlob::StateBlob </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Default constructor. </p>
+
+</div>
+</div>
+<a id="a0862bba44ed4b5ec02de440e53930567" name="a0862bba44ed4b5ec02de440e53930567"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0862bba44ed4b5ec02de440e53930567">&#9670;&#160;</a></span>~StateBlob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::engine::scratch::StateBlob::~StateBlob </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Default destructor. </p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="aa45357f0c368d7403306452c5ea56af0" name="aa45357f0c368d7403306452c5ea56af0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa45357f0c368d7403306452c5ea56af0">&#9670;&#160;</a></span>clone_structure()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &gt; gridfire::engine::scratch::StateBlob::clone_structure </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Create a deep copy of this blob with all enrolled scratchpads. </p>
+<p>Clones the blob structure and all enrolled scratchpads using their clone() methods. The resulting blob is independent and can be used in a separate thread.</p>
+<dl class="section return"><dt>Returns</dt><dd>A unique pointer to the cloned <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_function" href="#a69e65e83e5f3ab48edd12a27c293e074">StateBlob</a> blob;</div>
+<div class="line">blob.<a class="code hl_function" href="#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Initialize the scratchpad</span></div>
+<div class="line"><span class="keyword">auto</span> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = blob.<a class="code hl_function" href="#acedd28277e5c6805865a9baa3991686a">get</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;().value();</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Clone for parallel workers</span></div>
+<div class="line">std::vector&lt;std::unique_ptr&lt;StateBlob&gt;&gt; worker_blobs;</div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keywordtype">int</span> i = 0; i &lt; num_threads; ++i) {</div>
+<div class="line">    worker_blobs.push_back(blob.<a class="code hl_function" href="#aa45357f0c368d7403306452c5ea56af0">clone_structure</a>());</div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a69e65e83e5f3ab48edd12a27c293e074"><div class="ttname"><a href="#a69e65e83e5f3ab48edd12a27c293e074">gridfire::engine::scratch::StateBlob::StateBlob</a></div><div class="ttdeci">StateBlob()=default</div><div class="ttdoc">Default constructor.</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aa06d7bb89e67c4b6fd584d8f32a251bf"><div class="ttname"><a href="#aa06d7bb89e67c4b6fd584d8f32a251bf">gridfire::engine::scratch::StateBlob::enroll</a></div><div class="ttdeci">void enroll()</div><div class="ttdoc">Enroll a new scratchpad type into the blob.</div><div class="ttdef"><b>Definition</b> blob.h:196</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aa45357f0c368d7403306452c5ea56af0"><div class="ttname"><a href="#aa45357f0c368d7403306452c5ea56af0">gridfire::engine::scratch::StateBlob::clone_structure</a></div><div class="ttdeci">std::unique_ptr&lt; StateBlob &gt; clone_structure() const</div><div class="ttdoc">Create a deep copy of this blob with all enrolled scratchpads.</div><div class="ttdef"><b>Definition</b> blob.h:361</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_acedd28277e5c6805865a9baa3991686a"><div class="ttname"><a href="#acedd28277e5c6805865a9baa3991686a">gridfire::engine::scratch::StateBlob::get</a></div><div class="ttdeci">std::expected&lt; CTX *, Error &gt; get() const</div><div class="ttdoc">Retrieve a scratchpad by type.</div><div class="ttdef"><b>Definition</b> blob.h:230</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></div><div class="ttdoc">Scratchpad for storing CppAD automatic differentiation state for GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:83</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="aa06d7bb89e67c4b6fd584d8f32a251bf" name="aa06d7bb89e67c4b6fd584d8f32a251bf"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa06d7bb89e67c4b6fd584d8f32a251bf">&#9670;&#160;</a></span>enroll()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::engine::scratch::StateBlob::enroll </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Enroll a new scratchpad type into the blob. </p>
+<p>Creates a new instance of the specified scratchpad type and registers it in the appropriate slot. Only one instance per type is allowed.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to enroll (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>).</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname"><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">exceptions::ScratchPadError</a></td><td>if a scratchpad of this type is already enrolled.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_function" href="#a69e65e83e5f3ab48edd12a27c293e074">StateBlob</a> blob;</div>
+<div class="line">blob.<a class="code hl_function" href="#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line">blob.<a class="code hl_function" href="#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">AdaptiveEngineViewScratchPad</a>&gt;();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// This would throw - duplicate enrollment</span></div>
+<div class="line"><span class="comment">// blob.enroll&lt;GraphEngineScratchPad&gt;();</span></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for storing working memory used by AdaptiveEngineView computations.</div><div class="ttdef"><b>Definition</b> engine_adaptive_scratchpad.h:66</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="aad299d86d00010692f4b787fc80ae33b" name="aad299d86d00010692f4b787fc80ae33b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aad299d86d00010692f4b787fc80ae33b">&#9670;&#160;</a></span>error_to_string()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">static std::string gridfire::engine::scratch::StateBlob::error_to_string </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a></td>          <td class="paramname"><span class="paramname"><em>error</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel static">static</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Convert an <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8" title="Error codes for scratchpad operations.">Error</a> enum value to a human-readable string. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">error</td><td>The error code to convert. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>A string representation of the error.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keyword">auto</span> result = blob.get&lt;MyScratchPad&gt;();</div>
+<div class="line"><span class="keywordflow">if</span> (!result.has_value()) {</div>
+<div class="line">    std::cerr &lt;&lt; <span class="stringliteral">&quot;Error: &quot;</span> &lt;&lt; <a class="code hl_function" href="#aad299d86d00010692f4b787fc80ae33b">StateBlob::error_to_string</a>(result.error());</div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aad299d86d00010692f4b787fc80ae33b"><div class="ttname"><a href="#aad299d86d00010692f4b787fc80ae33b">gridfire::engine::scratch::StateBlob::error_to_string</a></div><div class="ttdeci">static std::string error_to_string(const Error error)</div><div class="ttdoc">Convert an Error enum value to a human-readable string.</div><div class="ttdef"><b>Definition</b> blob.h:142</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="acedd28277e5c6805865a9baa3991686a" name="acedd28277e5c6805865a9baa3991686a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acedd28277e5c6805865a9baa3991686a">&#9670;&#160;</a></span>get() <span class="overload">[1/3]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::expected&lt; CTX *, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> &gt; gridfire::engine::scratch::StateBlob::get </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Retrieve a scratchpad by type. </p>
+<p>Returns a pointer to the enrolled scratchpad of the specified type. In debug builds, performs a dynamic_cast for type safety; in release builds, uses static_cast for performance.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to retrieve (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>).</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>std::expected containing the scratchpad pointer, or an <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8" title="Error codes for scratchpad operations.">Error</a> if not found/invalid.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keyword">auto</span> result = blob.get&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line"><span class="keywordflow">if</span> (result.has_value()) {</div>
+<div class="line">    <a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = result.value();</div>
+<div class="line">    <span class="comment">// Use scratch...</span></div>
+<div class="line">} <span class="keywordflow">else</span> {</div>
+<div class="line">    <span class="comment">// Handle error</span></div>
+<div class="line">    std::cerr &lt;&lt; <a class="code hl_function" href="#aad299d86d00010692f4b787fc80ae33b">StateBlob::error_to_string</a>(result.error());</div>
+<div class="line">}</div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="a21ae830b98eb7bc0fd23ca53be92133b" name="a21ae830b98eb7bc0fd23ca53be92133b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a21ae830b98eb7bc0fd23ca53be92133b">&#9670;&#160;</a></span>get() <span class="overload">[2/3]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::expected&lt; CTX *, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> &gt; gridfire::engine::scratch::StateBlob::get </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Retrieve a scratchpad by type with optional initialization check. </p>
+<p>Returns a pointer to the enrolled scratchpad of the specified type. When MUST_BE_INITIALIZED is true, also verifies that the scratchpad has been initialized before returning it.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to retrieve (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>). </td></tr>
+    <tr><td class="paramname">MUST_BE_INITIALIZED</td><td>If true, returns an error for uninitialized scratchpads.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>std::expected containing the scratchpad pointer, or an <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8" title="Error codes for scratchpad operations.">Error</a> if not found/invalid/uninitialized.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="comment">// Get only if initialized</span></div>
+<div class="line"><span class="keyword">auto</span> result = blob.get&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>, <span class="keyword">true</span>&gt;();</div>
+<div class="line"><span class="keywordflow">if</span> (!result.has_value()) {</div>
+<div class="line">    <span class="keywordflow">if</span> (result.error() == <a class="code hl_enumvalue" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3">StateBlob::Error::SCRATCHPAD_NOT_INITIALIZED</a>) {</div>
+<div class="line">        <span class="comment">// Need to initialize first</span></div>
+<div class="line">    }</div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3"><div class="ttname"><a href="#a12f7a1fcb8bd6277f91b7ee08f267bd8abe3241d81779b1878546fba3b251eba3">gridfire::engine::scratch::StateBlob::Error::SCRATCHPAD_NOT_INITIALIZED</a></div><div class="ttdeci">@ SCRATCHPAD_NOT_INITIALIZED</div><div class="ttdoc">Scratchpad exists but is not initialized.</div><div class="ttdef"><b>Definition</b> blob.h:122</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="afee4b9a67b6ca62cfee1da9b938e9929" name="afee4b9a67b6ca62cfee1da9b938e9929"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afee4b9a67b6ca62cfee1da9b938e9929">&#9670;&#160;</a></span>get() <span class="overload">[3/3]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::expected&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> *, <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8">Error</a> &gt; gridfire::engine::scratch::StateBlob::get </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Retrieve a scratchpad by runtime <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> value. </p>
+<p>Returns a pointer to the abstract base class for the scratchpad at the specified type index. Useful when the concrete type is not known at compile time.</p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">type</td><td>The <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> enum value identifying the scratchpad.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>std::expected containing the <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html" title="Abstract base struct for engine scratchpad memory.">AbstractScratchPad</a> pointer, or an <a class="el" href="#a12f7a1fcb8bd6277f91b7ee08f267bd8" title="Error codes for scratchpad operations.">Error</a>.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_enumeration" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> type = <a class="code hl_enumvalue" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a>;</div>
+<div class="line"><span class="keyword">auto</span> result = blob.get(type);</div>
+<div class="line"><span class="keywordflow">if</span> (result.has_value()) {</div>
+<div class="line">    <a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = result.value();</div>
+<div class="line">    <span class="keywordflow">if</span> (<a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;is_initialized()) {</div>
+<div class="line">        <span class="comment">// Use scratch...</span></div>
+<div class="line">    }</div>
+<div class="line">}</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a61cbbc8ec7103cc74fc8e549fd0649be"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">gridfire::engine::scratch::ScratchPadType</a></div><div class="ttdeci">ScratchPadType</div><div class="ttdoc">Enumeration of all registered scratchpad types.</div><div class="ttdef"><b>Definition</b> types.h:64</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">gridfire::engine::scratch::ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a></div><div class="ttdeci">@ GRAPH_ENGINE_SCRATCHPAD</div><div class="ttdoc">GraphEngineScratchPad for CppAD-based engines.</div><div class="ttdef"><b>Definition</b> types.h:65</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></div><div class="ttdoc">Abstract base struct for engine scratchpad memory.</div><div class="ttdef"><b>Definition</b> scratchpad_abstract.h:82</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="a21048c544d6bd83b91bcdbcfd9adf1fe" name="a21048c544d6bd83b91bcdbcfd9adf1fe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a21048c544d6bd83b91bcdbcfd9adf1fe">&#9670;&#160;</a></span>get_registered_scratchpads()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unordered_set&lt; <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> &gt; gridfire::engine::scratch::StateBlob::get_registered_scratchpads </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Get the set of all registered scratchpad types. </p>
+<dl class="section return"><dt>Returns</dt><dd>An unordered set of <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> values for all enrolled scratchpads.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keyword">auto</span> registered = blob.get_registered_scratchpads();</div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keyword">auto</span> type : registered) {</div>
+<div class="line">    std::cout &lt;&lt; <span class="stringliteral">&quot;Registered: &quot;</span> &lt;&lt; <span class="keyword">static_cast&lt;</span><span class="keywordtype">int</span><span class="keyword">&gt;</span>(type) &lt;&lt; <span class="stringliteral">&quot;\n&quot;</span>;</div>
+<div class="line">}</div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="a1633fec8fc3592bdf954ee1603f5e2a8" name="a1633fec8fc3592bdf954ee1603f5e2a8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1633fec8fc3592bdf954ee1603f5e2a8">&#9670;&#160;</a></span>get_status()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="#a8c998621c476665e812be930664286e6">ScratchPadStatus</a> gridfire::engine::scratch::StateBlob::get_status </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Get the status of a specific scratchpad type. </p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to query (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>).</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>The <a class="el" href="#a8c998621c476665e812be930664286e6" title="Status codes for scratchpad slots.">ScratchPadStatus</a> indicating enrollment and initialization state.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keyword">auto</span> status = blob.get_status&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line"><span class="keywordflow">switch</span> (status) {</div>
+<div class="line">    <span class="keywordflow">case</span> <a class="code hl_enumvalue" href="#a8c998621c476665e812be930664286e6a34469de2e720bdcaf1ff759612b702a1">StateBlob::ScratchPadStatus::NOT_ENROLLED</a>:</div>
+<div class="line">        blob.enroll&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line">        <span class="keywordflow">break</span>;</div>
+<div class="line">    <span class="keywordflow">case</span> <a class="code hl_enumvalue" href="#a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5">StateBlob::ScratchPadStatus::ENROLLED_NOT_INITIALIZED</a>:</div>
+<div class="line">        <span class="comment">// Need to initialize</span></div>
+<div class="line">        <span class="keywordflow">break</span>;</div>
+<div class="line">    <span class="keywordflow">case</span> <a class="code hl_enumvalue" href="#a8c998621c476665e812be930664286e6afea544f1bb246637af8e638b9b873380">StateBlob::ScratchPadStatus::ENROLLED_INITIALIZED</a>:</div>
+<div class="line">        <span class="comment">// Ready to use</span></div>
+<div class="line">        <span class="keywordflow">break</span>;</div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a8c998621c476665e812be930664286e6a34469de2e720bdcaf1ff759612b702a1"><div class="ttname"><a href="#a8c998621c476665e812be930664286e6a34469de2e720bdcaf1ff759612b702a1">gridfire::engine::scratch::StateBlob::ScratchPadStatus::NOT_ENROLLED</a></div><div class="ttdeci">@ NOT_ENROLLED</div><div class="ttdoc">No scratchpad has been enrolled for this slot.</div><div class="ttdef"><b>Definition</b> blob.h:163</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5"><div class="ttname"><a href="#a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5">gridfire::engine::scratch::StateBlob::ScratchPadStatus::ENROLLED_NOT_INITIALIZED</a></div><div class="ttdeci">@ ENROLLED_NOT_INITIALIZED</div><div class="ttdoc">Scratchpad enrolled but not yet initialized.</div><div class="ttdef"><b>Definition</b> blob.h:164</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a8c998621c476665e812be930664286e6afea544f1bb246637af8e638b9b873380"><div class="ttname"><a href="#a8c998621c476665e812be930664286e6afea544f1bb246637af8e638b9b873380">gridfire::engine::scratch::StateBlob::ScratchPadStatus::ENROLLED_INITIALIZED</a></div><div class="ttdeci">@ ENROLLED_INITIALIZED</div><div class="ttdoc">Scratchpad enrolled and fully initialized.</div><div class="ttdef"><b>Definition</b> blob.h:165</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="af4e757cef6da5eee54fa4d7fcaeae47e" name="af4e757cef6da5eee54fa4d7fcaeae47e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af4e757cef6da5eee54fa4d7fcaeae47e">&#9670;&#160;</a></span>get_status_map()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unordered_map&lt; <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a>, <a class="el" href="#a8c998621c476665e812be930664286e6">ScratchPadStatus</a> &gt; gridfire::engine::scratch::StateBlob::get_status_map </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Get a map of all scratchpad types to their current status. </p>
+<dl class="section return"><dt>Returns</dt><dd>An unordered map from <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> to <a class="el" href="#a8c998621c476665e812be930664286e6" title="Status codes for scratchpad slots.">ScratchPadStatus</a> for all slots.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keyword">auto</span> status_map = blob.get_status_map();</div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>&amp; [type, status] : status_map) {</div>
+<div class="line">    <span class="keywordflow">if</span> (status == <a class="code hl_enumvalue" href="#a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5">StateBlob::ScratchPadStatus::ENROLLED_NOT_INITIALIZED</a>) {</div>
+<div class="line">        std::cout &lt;&lt; <span class="stringliteral">&quot;Scratchpad &quot;</span> &lt;&lt; <span class="keyword">static_cast&lt;</span><span class="keywordtype">int</span><span class="keyword">&gt;</span>(type) &lt;&lt; <span class="stringliteral">&quot; needs initialization\n&quot;</span>;</div>
+<div class="line">    }</div>
+<div class="line">}</div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="a242bfdfff1f1286253a192162203ab46" name="a242bfdfff1f1286253a192162203ab46"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a242bfdfff1f1286253a192162203ab46">&#9670;&#160;</a></span>initialized()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::StateBlob::initialized </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Check if a specific scratchpad type is initialized. </p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to check (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>).</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>true if the scratchpad is enrolled and initialized.</dd></dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname"><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">exceptions::ScratchPadError</a></td><td>if the scratchpad type is not enrolled.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keywordflow">if</span> (blob.initialized&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;()) {</div>
+<div class="line">    <span class="comment">// Safe to use the scratchpad</span></div>
+<div class="line">}</div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a7c2c40faa5d4a3c55f5d2d63e00377ea" name="a7c2c40faa5d4a3c55f5d2d63e00377ea"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7c2c40faa5d4a3c55f5d2d63e00377ea">&#9670;&#160;</a></span>MAX_SCRATCHPADS</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::engine::scratch::StateBlob::MAX_SCRATCHPADS = static_cast&lt;size_t&gt;(<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103">ScratchPadType::_COUNT</a>)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Maximum number of scratchpad slots, derived from <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103" title="Sentinel value representing the total number of scratchpad types. Do not use as a type.">ScratchPadType::_COUNT</a>. </p>
+
+</div>
+</div>
+<a id="a327081a9f42e5ff242adacbc304638b5" name="a327081a9f42e5ff242adacbc304638b5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a327081a9f42e5ff242adacbc304638b5">&#9670;&#160;</a></span>scratchpad_enrolled_flags</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::array&lt;bool, <a class="el" href="#a7c2c40faa5d4a3c55f5d2d63e00377ea">MAX_SCRATCHPADS</a>&gt; gridfire::engine::scratch::StateBlob::scratchpad_enrolled_flags {false}</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Flags indicating which scratchpad slots have been enrolled. </p>
+
+</div>
+</div>
+<a id="a386785b28d25459a616812281bb2ced5" name="a386785b28d25459a616812281bb2ced5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a386785b28d25459a616812281bb2ced5">&#9670;&#160;</a></span>scratchpads</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::array&lt;std::unique_ptr&lt;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a>&gt;, <a class="el" href="#a7c2c40faa5d4a3c55f5d2d63e00377ea">MAX_SCRATCHPADS</a>&gt; gridfire::engine::scratch::StateBlob::scratchpads {}</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Array of scratchpad instances indexed by <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a>. </p>
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="blob_8h.html">blob.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine.html">engine</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a></li><li class="navelem"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
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index 00000000..71fc05ca
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+var classgridfire_1_1engine_1_1scratch_1_1_state_blob =
+[
+    [ "Error", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a12f7a1fcb8bd6277f91b7ee08f267bd8", [
+      [ "SCRATCHPAD_NOT_FOUND", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a12f7a1fcb8bd6277f91b7ee08f267bd8a9947eb0c928ade198f66da62d492ee67", null ],
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+      [ "SCRATCHPAD_UNKNOWN_ERROR", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a12f7a1fcb8bd6277f91b7ee08f267bd8a048ec178b7e21c38564d5dd707e843e0", null ]
+    ] ],
+    [ "ScratchPadStatus", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a8c998621c476665e812be930664286e6", [
+      [ "NOT_ENROLLED", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a8c998621c476665e812be930664286e6a34469de2e720bdcaf1ff759612b702a1", null ],
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+      [ "ENROLLED_INITIALIZED", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a8c998621c476665e812be930664286e6afea544f1bb246637af8e638b9b873380", null ]
+    ] ],
+    [ "StateBlob", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a69e65e83e5f3ab48edd12a27c293e074", null ],
+    [ "~StateBlob", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a0862bba44ed4b5ec02de440e53930567", null ],
+    [ "clone_structure", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa45357f0c368d7403306452c5ea56af0", null ],
+    [ "enroll", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf", null ],
+    [ "error_to_string", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aad299d86d00010692f4b787fc80ae33b", null ],
+    [ "get", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#acedd28277e5c6805865a9baa3991686a", null ],
+    [ "get", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a21ae830b98eb7bc0fd23ca53be92133b", null ],
+    [ "get", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#afee4b9a67b6ca62cfee1da9b938e9929", null ],
+    [ "get_registered_scratchpads", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a21048c544d6bd83b91bcdbcfd9adf1fe", null ],
+    [ "get_status", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a1633fec8fc3592bdf954ee1603f5e2a8", null ],
+    [ "get_status_map", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#af4e757cef6da5eee54fa4d7fcaeae47e", null ],
+    [ "initialized", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a242bfdfff1f1286253a192162203ab46", null ],
+    [ "MAX_SCRATCHPADS", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a7c2c40faa5d4a3c55f5d2d63e00377ea", null ],
+    [ "scratchpad_enrolled_flags", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a327081a9f42e5ff242adacbc304638b5", null ],
+    [ "scratchpads", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a386785b28d25459a616812281bb2ced5", null ]
+];
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+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="classgridfire_1_1exceptions_1_1_scratch_pad_error-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::exceptions::ScratchPadError Class Reference</div></div>
+</div><!--header-->
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+<p><code>#include &lt;error_scratchpad.h&gt;</code></p>
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index e63e91d0..5ffe54b6 100644
--- a/docs/html/classgridfire_1_1exceptions_1_1_singular_jacobian_error-members.html
+++ b/docs/html/classgridfire_1_1exceptions_1_1_singular_jacobian_error-members.html
@@ -29,7 +29,7 @@
  <tbody>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1exceptions_1_1_singular_jacobian_error.html b/docs/html/classgridfire_1_1exceptions_1_1_singular_jacobian_error.html
index 13afbede..4fefe3eb 100644
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+++ b/docs/html/classgridfire_1_1exceptions_1_1_singular_jacobian_error.html
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 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">gridfire::io::MESANetworkFileParser</a>, including all inherited members.</p>
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+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#a84aa6894a331ad57bdab1e1ab85d4055">LogManager</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">gridfire::io::MESANetworkFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ab7f82597abf17f16c401bcdf528bd099">m_filename</a></td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">gridfire::io::MESANetworkFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ab9c683289d48e58edf06bf59215b4937">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">gridfire::io::MESANetworkFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ac5963d0da6780de753df996b490f8d2c">MESANetworkFileParser</a>(const std::string &amp;filename)</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">gridfire::io::MESANetworkFileParser</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#a568194277733b5c537901f8af32ee329">parse</a>(const std::string &amp;filename) const override</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">gridfire::io::MESANetworkFileParser</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html#a9b4095d06fad5df3805c92ae97b3eab3">~NetworkFileParser</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html">gridfire::io::NetworkFileParser</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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 <div class="textblock"><p>A parser for MESA-format network files. </p>
 <p>This class is designed to parse reaction network files that follow the format used by the MESA stellar evolution code. </p>
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-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
-          <td class="memname">using <a class="el" href="#af43ad8375abf1cedfdccc296b9958c2b">gridfire::io::MESANetworkFileParser::Config</a> = fourdst::config::Config</td>
-        </tr>
-      </table>
-  </td>
-  <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
-  </tr>
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-</div><div class="memdoc">
-
-</div>
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@@ -280,8 +256,8 @@ Private Attributes</h2></td></tr>
 </div>
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-<a id="aea206c3a7600db8d657666fef88fa20d" name="aea206c3a7600db8d657666fef88fa20d"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aea206c3a7600db8d657666fef88fa20d">&#9670;&#160;</a></span>m_config</h2>
+<a id="a32f3bcea25a875fad5450d9e30884e7d" name="a32f3bcea25a875fad5450d9e30884e7d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a32f3bcea25a875fad5450d9e30884e7d">&#9670;&#160;</a></span>m_config</h2>
 
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@@ -290,7 +266,7 @@ Private Attributes</h2></td></tr>
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       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="#af43ad8375abf1cedfdccc296b9958c2b">Config</a>&amp; gridfire::io::MESANetworkFileParser::m_config = Config::getInstance()</td>
+          <td class="memname">fourdst::config::Config&lt;<a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a>&gt; gridfire::io::MESANetworkFileParser::m_config</td>
         </tr>
       </table>
   </td>
diff --git a/docs/html/classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.js b/docs/html/classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.js
index 100cc2d6..a81a161a 100644
--- a/docs/html/classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.js
+++ b/docs/html/classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.js
@@ -1,10 +1,9 @@
 var classgridfire_1_1io_1_1_m_e_s_a_network_file_parser =
 [
-    [ "Config", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#af43ad8375abf1cedfdccc296b9958c2b", null ],
     [ "LogManager", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#a84aa6894a331ad57bdab1e1ab85d4055", null ],
     [ "MESANetworkFileParser", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ac5963d0da6780de753df996b490f8d2c", null ],
     [ "parse", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#a568194277733b5c537901f8af32ee329", null ],
-    [ "m_config", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#aea206c3a7600db8d657666fef88fa20d", null ],
+    [ "m_config", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#a32f3bcea25a875fad5450d9e30884e7d", null ],
     [ "m_filename", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ab7f82597abf17f16c401bcdf528bd099", null ],
     [ "m_logger", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ab9c683289d48e58edf06bf59215b4937", null ]
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diff --git a/docs/html/classgridfire_1_1io_1_1_network_file_parser-members.html b/docs/html/classgridfire_1_1io_1_1_network_file_parser-members.html
index 0d381d09..5a3d1526 100644
--- a/docs/html/classgridfire_1_1io_1_1_network_file_parser-members.html
+++ b/docs/html/classgridfire_1_1io_1_1_network_file_parser-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1io_1_1_network_file_parser.html b/docs/html/classgridfire_1_1io_1_1_network_file_parser.html
index 3e0f5510..f844abda 100644
--- a/docs/html/classgridfire_1_1io_1_1_network_file_parser.html
+++ b/docs/html/classgridfire_1_1io_1_1_network_file_parser.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -204,7 +204,7 @@ Public Member Functions</h2></td></tr>
 <div class="line">} <span class="keywordflow">catch</span> (<span class="keyword">const</span> std::runtime_error&amp; e) {</div>
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+<div class="ttc" id="anamespacegridfire_1_1io_html_abcbdcbd13cfa8c9fbe1b48e8ee2cc352"><div class="ttname"><a href="namespacegridfire_1_1io.html#abcbdcbd13cfa8c9fbe1b48e8ee2cc352">gridfire::io::ParsedNetworkData</a></div><div class="ttdeci">std::vector&lt; std::string &gt; ParsedNetworkData</div><div class="ttdef"><b>Definition</b> network_file.h:13</div></div>
 </div><!-- fragment --> 
 <p>Implemented in <a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#a568194277733b5c537901f8af32ee329">gridfire::io::MESANetworkFileParser</a>, <a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a4df01e3a93e1291d2cde0458545325f8">gridfire::io::SimpleReactionListFileParser</a>, and <a class="el" href="class_py_network_file_parser.html#afe09d1e5b07110e62cf4c6ec713cff54">PyNetworkFileParser</a>.</p>
 
diff --git a/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser-members.html b/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser-members.html
index 884a421b..9ddfb191 100644
--- a/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser-members.html
+++ b/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser-members.html
@@ -29,7 +29,7 @@
  <tbody>
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   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a>, including all inherited members.</p>
 <table class="directory">
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-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a6f8f9a1f54cd2be5ec66c3181be892de">LogManager</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a4061e99bd77a3de0d6d9e317bfc74874">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#acef7eafe3cbea159259f69c88d309b66">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a4df01e3a93e1291d2cde0458545325f8">parse</a>(const std::string &amp;filename) const override</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#afc8ed91e8c98205c505e3d9f0cff1993">SimpleReactionListFileParser</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html#a9b4095d06fad5df3805c92ae97b3eab3">~NetworkFileParser</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html">gridfire::io::NetworkFileParser</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a6f8f9a1f54cd2be5ec66c3181be892de">LogManager</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#ab63e6743c7e69681fbf5749dc0557132">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#acef7eafe3cbea159259f69c88d309b66">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a4df01e3a93e1291d2cde0458545325f8">parse</a>(const std::string &amp;filename) const override</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#afc8ed91e8c98205c505e3d9f0cff1993">SimpleReactionListFileParser</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">gridfire::io::SimpleReactionListFileParser</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html#a9b4095d06fad5df3805c92ae97b3eab3">~NetworkFileParser</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html">gridfire::io::NetworkFileParser</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html b/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html
index e34dc576..c5a26438 100644
--- a/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html
+++ b/docs/html/classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -138,15 +138,13 @@ Public Member Functions</h2></td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-types" name="pri-types"></a>
 Private Types</h2></td></tr>
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 Private Attributes</h2></td></tr>
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-<tr class="separator:a4061e99bd77a3de0d6d9e317bfc74874"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ab63e6743c7e69681fbf5749dc0557132"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:acef7eafe3cbea159259f69c88d309b66" id="r_acef7eafe3cbea159259f69c88d309b66"><td class="memItemLeft" align="right" valign="top">quill::Logger *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#acef7eafe3cbea159259f69c88d309b66">m_logger</a> = LogManager::getInstance().getLogger(&quot;log&quot;)</td></tr>
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 <div class="textblock"><p>A parser for simple text files containing a list of reactions. </p>
 <p>This parser reads a file where each line contains a single reaction name. It supports comments (lines starting with '#') and ignores empty lines. </p>
 </div><h2 class="groupheader">Member Typedef Documentation</h2>
-<a id="ad913155a5a2a36b29e4ce4ca8d71c036" name="ad913155a5a2a36b29e4ce4ca8d71c036"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad913155a5a2a36b29e4ce4ca8d71c036">&#9670;&#160;</a></span>Config</h2>
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-<div class="memitem">
-<div class="memproto">
-<table class="mlabels">
-  <tr>
-  <td class="mlabels-left">
-      <table class="memname">
-        <tr>
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-        </tr>
-      </table>
-  </td>
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-<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
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@@ -278,15 +254,15 @@ Private Attributes</h2></td></tr>
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+<div class="ttc" id="anamespacegridfire_1_1io_html_abcbdcbd13cfa8c9fbe1b48e8ee2cc352"><div class="ttname"><a href="namespacegridfire_1_1io.html#abcbdcbd13cfa8c9fbe1b48e8ee2cc352">gridfire::io::ParsedNetworkData</a></div><div class="ttdeci">std::vector&lt; std::string &gt; ParsedNetworkData</div><div class="ttdef"><b>Definition</b> network_file.h:13</div></div>
 </div><!-- fragment --> 
 <p>Implements <a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html#a66e8e724c903d6ef4dd1c8103276bdbf">gridfire::io::NetworkFileParser</a>.</p>
 
 </div>
 </div>
 <h2 class="groupheader">Member Data Documentation</h2>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy-members.html
index ad9ae20e..96e49f20 100644
--- a/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy-members.html
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  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html
index 16041e9b..5e14815c 100644
--- a/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html
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  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy-members.html
index 4b0c3b41..c8f2eca3 100644
--- a/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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@@ -106,24 +106,25 @@ $(function(){initNavTree('classgridfire_1_1policy_1_1_main_sequence_policy.html'
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a>, including all inherited members.</p>
 <table class="directory">
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a5f38cd1549544854e60c2c7a847c0ea7">build_partition_function</a>()</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#af5101829bcb344aa29ea65983732333d">check_status</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#aa9b4e39dacada73756bfd78885da60bd">construct</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#ac3263f792de714d5ffed31bfac17d808">check_status</a>(engine::scratch::StateBlob &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a3b600b9f02113d6ae3be22c556872ba9">construct</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a43724347608826a613f6c65385050186">get_engine_stack</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a70c617ea5b13a1cdc62fbfe21963098c">get_engine_types_stack</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a8dbef0e799968af4103e184b6e30c221">get_partition_function</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#adcefccb171b339350a9b4a61d89adbbc">get_seed_reactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a041b0a99120efdc6abae312c568a9e15">get_seed_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a1ecfb6ea2e18e8cf55228f80ee5c50ed">get_status</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a9b55ccd1a059ede5127b07a18274f6e9">m_initializing_composition</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a0416e55a72362487212a92b3d18dfb14">m_network_stack</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a57a7bbb55eb6f96396d87811f34cc0a4">m_partition_function</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a145fe245a253e8ecd4da9726b9379b3c">m_reaction_policy</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a67cda11c3ef95f5ac2ff384965c5a500">m_seed_species</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a023a7cbb9971a787713abaf344848211">m_status</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#acd3224e5781f3d19a8ff300b7fd9a21c">MainSequencePolicy</a>(const fourdst::composition::Composition &amp;composition)</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a0fcac0f9d41917f888788a772daaaebc">MainSequencePolicy</a>(std::vector&lt; fourdst::atomic::Species &gt; seed_species, const std::vector&lt; double &gt; &amp;mass_fractions)</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a6520ddfead2ba2700e2b1329774b4ff6">name</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a0d32c22a2d3794c328e8dd24d2cda2be">~NetworkPolicy</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#ad0376d9982ee21d37d7a5fe60e408765">get_stack_scratch_blob</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a1ecfb6ea2e18e8cf55228f80ee5c50ed">get_status</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a9b55ccd1a059ede5127b07a18274f6e9">m_initializing_composition</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a0416e55a72362487212a92b3d18dfb14">m_network_stack</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a57a7bbb55eb6f96396d87811f34cc0a4">m_partition_function</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a145fe245a253e8ecd4da9726b9379b3c">m_reaction_policy</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a67cda11c3ef95f5ac2ff384965c5a500">m_seed_species</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a023a7cbb9971a787713abaf344848211">m_status</a></td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#acd3224e5781f3d19a8ff300b7fd9a21c">MainSequencePolicy</a>(const fourdst::composition::Composition &amp;composition)</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a0fcac0f9d41917f888788a772daaaebc">MainSequencePolicy</a>(std::vector&lt; fourdst::atomic::Species &gt; seed_species, const std::vector&lt; double &gt; &amp;mass_fractions)</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a6520ddfead2ba2700e2b1329774b4ff6">name</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a0d32c22a2d3794c328e8dd24d2cda2be">~NetworkPolicy</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.html b/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.html
index 9e5f9a53..26a8ba4e 100644
--- a/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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@@ -141,9 +141,9 @@ Public Member Functions</h2></td></tr>
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-<tr class="memitem:aa9b4e39dacada73756bfd78885da60bd" id="r_aa9b4e39dacada73756bfd78885da60bd"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa9b4e39dacada73756bfd78885da60bd">construct</a> () override</td></tr>
-<tr class="memdesc:aa9b4e39dacada73756bfd78885da60bd"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs and returns the complete, multi-layered dynamic engine.  <br /></td></tr>
-<tr class="separator:aa9b4e39dacada73756bfd78885da60bd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3b600b9f02113d6ae3be22c556872ba9" id="r_a3b600b9f02113d6ae3be22c556872ba9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1policy_1_1_construction_results.html">ConstructionResults</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3b600b9f02113d6ae3be22c556872ba9">construct</a> () override</td></tr>
+<tr class="memdesc:a3b600b9f02113d6ae3be22c556872ba9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs and returns the complete, multi-layered dynamic engine.  <br /></td></tr>
+<tr class="separator:a3b600b9f02113d6ae3be22c556872ba9"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 <tr class="memdesc:a1ecfb6ea2e18e8cf55228f80ee5c50ed"><td class="mdescLeft">&#160;</td><td class="mdescRight">Gets the current status of the policy.  <br /></td></tr>
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@@ -153,14 +153,16 @@ Public Member Functions</h2></td></tr>
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 <tr class="separator:a8dbef0e799968af4103e184b6e30c221"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ad0376d9982ee21d37d7a5fe60e408765" id="r_ad0376d9982ee21d37d7a5fe60e408765"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad0376d9982ee21d37d7a5fe60e408765">get_stack_scratch_blob</a> () const override</td></tr>
+<tr class="separator:ad0376d9982ee21d37d7a5fe60e408765"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="inherit_header pub_methods_classgridfire_1_1policy_1_1_network_policy"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1policy_1_1_network_policy')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td></tr>
 <tr class="memitem:a0d32c22a2d3794c328e8dd24d2cda2be inherit pub_methods_classgridfire_1_1policy_1_1_network_policy" id="r_a0d32c22a2d3794c328e8dd24d2cda2be"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a0d32c22a2d3794c328e8dd24d2cda2be">~NetworkPolicy</a> ()=default</td></tr>
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 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-methods" name="pri-methods"></a>
 Private Member Functions</h2></td></tr>
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-<tr class="separator:af5101829bcb344aa29ea65983732333d"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ac3263f792de714d5ffed31bfac17d808"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-static-methods" name="pri-static-methods"></a>
 Static Private Member Functions</h2></td></tr>
@@ -191,7 +193,7 @@ Private Attributes</h2></td></tr>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>A <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html" title="Abstract interface for policies that construct DynamicEngine networks from a seed composition.">NetworkPolicy</a> for building reaction networks suitable for low-mass main-sequence stars. </p>
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+<p>The <code><a class="el" href="#a3b600b9f02113d6ae3be22c556872ba9" title="Constructs and returns the complete, multi-layered dynamic engine.">construct()</a></code> method builds a stack of engine views (<code>GraphEngine</code> -&gt; <code>MultiscalePartitioningEngineView</code> -&gt; <code>AdaptiveEngineView</code>) to provide a dynamically adjusting, performance-optimized reaction network.</p>
 <p>This policy requires the following seed species:</p><ul>
 <li>H-1</li>
 <li>He-3</li>
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-<h2 class="memtitle"><span class="permalink"><a href="#af5101829bcb344aa29ea65983732333d">&#9670;&#160;</a></span>check_status()</h2>
+<a id="ac3263f792de714d5ffed31bfac17d808" name="ac3263f792de714d5ffed31bfac17d808"></a>
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           <td>(</td>
-          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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@@ -349,8 +351,8 @@ Private Attributes</h2></td></tr>
 
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-<h2 class="memtitle"><span class="permalink"><a href="#aa9b4e39dacada73756bfd78885da60bd">&#9670;&#160;</a></span>construct()</h2>
+<a id="a3b600b9f02113d6ae3be22c556872ba9" name="a3b600b9f02113d6ae3be22c556872ba9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3b600b9f02113d6ae3be22c556872ba9">&#9670;&#160;</a></span>construct()</h2>
 
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-          <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp; gridfire::policy::MainSequencePolicy::construct </td>
+          <td class="memname"><a class="el" href="structgridfire_1_1policy_1_1_construction_results.html">ConstructionResults</a> gridfire::policy::MainSequencePolicy::construct </td>
           <td>(</td>
           <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
           <td></td>
@@ -390,14 +392,13 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section user"><dt>Example</dt><dd><div class="fragment"><div class="line">LowMassMainSequencePolicy enginePolicy(composition);</div>
 <div class="line">DynamicEngine&amp; <a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a> = enginePolicy.construct();</div>
-<div class="line"><a class="code hl_class" href="classgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy.html">solver::CVODESolverStrategy</a> <a class="code hl_namespace" href="namespacegridfire_1_1solver.html">solver</a>(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line">solver::CVODESolverStrategy <a class="code hl_namespace" href="namespacegridfire_1_1solver.html">solver</a>(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
 <div class="line"><span class="comment">// ... run solver ...</span></div>
-<div class="ttc" id="aclassgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_html"><div class="ttname"><a href="classgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy.html">gridfire::solver::CVODESolverStrategy</a></div><div class="ttdoc">Stiff ODE integrator backed by SUNDIALS CVODE (BDF) for network + energy.</div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:81</div></div>
-<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:38</div></div>
-<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:46</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> GridSolver.h:7</div></div>
 </div><!-- fragment --> </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a13cd74c967592392b01d8fe9a5b34d88">gridfire::policy::NetworkPolicy</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a1ee276d40dfdfe1bf313b29436cbcfba">gridfire::policy::NetworkPolicy</a>.</p>
 
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@@ -540,6 +541,33 @@ Private Attributes</h2></td></tr>
 
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+</div>
+</div>
+<a id="ad0376d9982ee21d37d7a5fe60e408765" name="ad0376d9982ee21d37d7a5fe60e408765"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad0376d9982ee21d37d7a5fe60e408765">&#9670;&#160;</a></span>get_stack_scratch_blob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &gt; gridfire::policy::MainSequencePolicy::get_stack_scratch_blob </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a07ae9888263f627d8a3516ecf6a0cf9b">gridfire::policy::NetworkPolicy</a>.</p>
+
 </div>
 </div>
 <a id="a1ecfb6ea2e18e8cf55228f80ee5c50ed" name="a1ecfb6ea2e18e8cf55228f80ee5c50ed"></a>
diff --git a/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.js b/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.js
index 0fda1daf..12f300b2 100644
--- a/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.js
+++ b/docs/html/classgridfire_1_1policy_1_1_main_sequence_policy.js
@@ -3,13 +3,14 @@ var classgridfire_1_1policy_1_1_main_sequence_policy =
     [ "MainSequencePolicy", "classgridfire_1_1policy_1_1_main_sequence_policy.html#acd3224e5781f3d19a8ff300b7fd9a21c", null ],
     [ "MainSequencePolicy", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a0fcac0f9d41917f888788a772daaaebc", null ],
     [ "build_partition_function", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a5f38cd1549544854e60c2c7a847c0ea7", null ],
-    [ "check_status", "classgridfire_1_1policy_1_1_main_sequence_policy.html#af5101829bcb344aa29ea65983732333d", null ],
-    [ "construct", "classgridfire_1_1policy_1_1_main_sequence_policy.html#aa9b4e39dacada73756bfd78885da60bd", null ],
+    [ "check_status", "classgridfire_1_1policy_1_1_main_sequence_policy.html#ac3263f792de714d5ffed31bfac17d808", null ],
+    [ "construct", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a3b600b9f02113d6ae3be22c556872ba9", null ],
     [ "get_engine_stack", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a43724347608826a613f6c65385050186", null ],
     [ "get_engine_types_stack", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a70c617ea5b13a1cdc62fbfe21963098c", null ],
     [ "get_partition_function", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a8dbef0e799968af4103e184b6e30c221", null ],
     [ "get_seed_reactions", "classgridfire_1_1policy_1_1_main_sequence_policy.html#adcefccb171b339350a9b4a61d89adbbc", null ],
     [ "get_seed_species", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a041b0a99120efdc6abae312c568a9e15", null ],
+    [ "get_stack_scratch_blob", "classgridfire_1_1policy_1_1_main_sequence_policy.html#ad0376d9982ee21d37d7a5fe60e408765", null ],
     [ "get_status", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a1ecfb6ea2e18e8cf55228f80ee5c50ed", null ],
     [ "name", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a6520ddfead2ba2700e2b1329774b4ff6", null ],
     [ "m_initializing_composition", "classgridfire_1_1policy_1_1_main_sequence_policy.html#a9b55ccd1a059ede5127b07a18274f6e9", null ],
diff --git a/docs/html/classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy-members.html
index f2ef5a50..44a92545 100644
--- a/docs/html/classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html
index 83d5d8d8..dccf9326 100644
--- a/docs/html/classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html
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index 612e62ba..3331f6fd 100644
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index 4871e36b..2a80dd85 100644
--- a/docs/html/classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_network_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_network_policy-members.html
index 67c1bb67..3cd54439 100644
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@@ -105,15 +105,16 @@ $(function(){initNavTree('classgridfire_1_1policy_1_1_network_policy.html','');
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a>, including all inherited members.</p>
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+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a1ee276d40dfdfe1bf313b29436cbcfba">construct</a>()=0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
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   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a1c395eb83b0bcf728db230e7772aabcf">get_partition_function</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#aa33fcee020f5acd8e14aadaf3758ad2f">get_seed_reactions</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
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-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a3d0f2aee8ead71da4d421fb659fb30f7">get_status</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#aa59c1baf7077a5d35d45ff753b32a565">name</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a0d32c22a2d3794c328e8dd24d2cda2be">~NetworkPolicy</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a07ae9888263f627d8a3516ecf6a0cf9b">get_stack_scratch_blob</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a3d0f2aee8ead71da4d421fb659fb30f7">get_status</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#aa59c1baf7077a5d35d45ff753b32a565">name</a>() const =0</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a0d32c22a2d3794c328e8dd24d2cda2be">~NetworkPolicy</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1policy_1_1_network_policy.html b/docs/html/classgridfire_1_1policy_1_1_network_policy.html
index a5a36889..8551f041 100644
--- a/docs/html/classgridfire_1_1policy_1_1_network_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_network_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -129,9 +129,9 @@ Public Member Functions</h2></td></tr>
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 <tr class="memdesc:aa33fcee020f5acd8e14aadaf3758ad2f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Returns the set of seed reactions the policy requires.  <br /></td></tr>
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-<tr class="memitem:a13cd74c967592392b01d8fe9a5b34d88" id="r_a13cd74c967592392b01d8fe9a5b34d88"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a13cd74c967592392b01d8fe9a5b34d88">construct</a> ()=0</td></tr>
-<tr class="memdesc:a13cd74c967592392b01d8fe9a5b34d88"><td class="mdescLeft">&#160;</td><td class="mdescRight">Construct and return a DynamicEngine instance (or engine view stack) satisfying the policy.  <br /></td></tr>
-<tr class="separator:a13cd74c967592392b01d8fe9a5b34d88"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a1ee276d40dfdfe1bf313b29436cbcfba" id="r_a1ee276d40dfdfe1bf313b29436cbcfba"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="structgridfire_1_1policy_1_1_construction_results.html">ConstructionResults</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1ee276d40dfdfe1bf313b29436cbcfba">construct</a> ()=0</td></tr>
+<tr class="memdesc:a1ee276d40dfdfe1bf313b29436cbcfba"><td class="mdescLeft">&#160;</td><td class="mdescRight">Construct and return a DynamicEngine instance (or engine view stack) satisfying the policy.  <br /></td></tr>
+<tr class="separator:a1ee276d40dfdfe1bf313b29436cbcfba"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a3d0f2aee8ead71da4d421fb659fb30f7" id="r_a3d0f2aee8ead71da4d421fb659fb30f7"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109">NetworkPolicyStatus</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3d0f2aee8ead71da4d421fb659fb30f7">get_status</a> () const =0</td></tr>
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@@ -141,6 +141,8 @@ Public Member Functions</h2></td></tr>
 <tr class="separator:aac63625678d287d0ca36c98f51e86dd2"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 <tr class="separator:a1c395eb83b0bcf728db230e7772aabcf"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a07ae9888263f627d8a3516ecf6a0cf9b" id="r_a07ae9888263f627d8a3516ecf6a0cf9b"><td class="memItemLeft" align="right" valign="top">virtual std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a07ae9888263f627d8a3516ecf6a0cf9b">get_stack_scratch_blob</a> () const =0</td></tr>
+<tr class="separator:a07ae9888263f627d8a3516ecf6a0cf9b"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Abstract interface for policies that construct DynamicEngine networks from a seed composition. </p>
@@ -184,8 +186,8 @@ Public Member Functions</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a13cd74c967592392b01d8fe9a5b34d88" name="a13cd74c967592392b01d8fe9a5b34d88"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a13cd74c967592392b01d8fe9a5b34d88">&#9670;&#160;</a></span>construct()</h2>
+<a id="a1ee276d40dfdfe1bf313b29436cbcfba" name="a1ee276d40dfdfe1bf313b29436cbcfba"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1ee276d40dfdfe1bf313b29436cbcfba">&#9670;&#160;</a></span>construct()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -194,7 +196,7 @@ Public Member Functions</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">virtual <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp; gridfire::policy::NetworkPolicy::construct </td>
+          <td class="memname">virtual <a class="el" href="structgridfire_1_1policy_1_1_construction_results.html">ConstructionResults</a> gridfire::policy::NetworkPolicy::construct </td>
           <td>(</td>
           <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
           <td></td>
@@ -219,16 +221,15 @@ Public Member Functions</h2></td></tr>
   </dd>
 </dl>
 <dl class="section user"><dt>Example</dt><dd><div class="fragment"><div class="line">DynamicEngine &amp;<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a> = <a class="code hl_namespace" href="namespacegridfire_1_1policy.html">policy</a>.construct();</div>
-<div class="line"><a class="code hl_class" href="classgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy.html">solver::CVODESolverStrategy</a> <a class="code hl_namespace" href="namespacegridfire_1_1solver.html">solver</a>(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line">solver::CVODESolverStrategy <a class="code hl_namespace" href="namespacegridfire_1_1solver.html">solver</a>(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
 <div class="line"><a class="code hl_struct" href="structgridfire_1_1_net_out.html">NetOut</a> out = <a class="code hl_namespace" href="namespacegridfire_1_1solver.html">solver</a>.evaluate(netIn, <span class="keyword">true</span>);</div>
-<div class="ttc" id="aclassgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_html"><div class="ttname"><a href="classgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy.html">gridfire::solver::CVODESolverStrategy</a></div><div class="ttdoc">Stiff ODE integrator backed by SUNDIALS CVODE (BDF) for network + energy.</div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:81</div></div>
-<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:38</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
 <div class="ttc" id="anamespacegridfire_1_1policy_html"><div class="ttname"><a href="namespacegridfire_1_1policy.html">gridfire::policy</a></div><div class="ttdef"><b>Definition</b> chains.h:25</div></div>
-<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:46</div></div>
+<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> GridSolver.h:7</div></div>
 <div class="ttc" id="astructgridfire_1_1_net_out_html"><div class="ttname"><a href="structgridfire_1_1_net_out.html">gridfire::NetOut</a></div><div class="ttdef"><b>Definition</b> types.h:37</div></div>
 </div><!-- fragment --> </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#aa9b4e39dacada73756bfd78885da60bd">gridfire::policy::MainSequencePolicy</a>, and <a class="el" href="class_py_network_policy.html#a6871d8aae79db9b784d40b05225b3445">PyNetworkPolicy</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a3b600b9f02113d6ae3be22c556872ba9">gridfire::policy::MainSequencePolicy</a>, and <a class="el" href="class_py_network_policy.html#a685d2c695279edb3697d3552f9d3ba43">PyNetworkPolicy</a>.</p>
 
 </div>
 </div>
@@ -341,8 +342,8 @@ Public Member Functions</h2></td></tr>
 <dl class="section user"><dt>Example</dt><dd><div class="fragment"><div class="line"><span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;reactions = <a class="code hl_namespace" href="namespacegridfire_1_1policy.html">policy</a>.get_seed_reactions();</div>
 <div class="line"><span class="comment">// inspect reaction IDs or count</span></div>
 <div class="line">std::cout &lt;&lt; <span class="stringliteral">&quot;Policy requires &quot;</span> &lt;&lt; reactions.<a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">size</a>() &lt;&lt; <span class="stringliteral">&quot; reactions&quot;</span> &lt;&lt; std::endl;</div>
-<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></div><div class="ttdef"><b>Definition</b> reaction.h:842</div></div>
-<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_af14cf34d7367cb6a6be5191724c2d4cf"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::reaction::ReactionSet::size</a></div><div class="ttdeci">size_t size() const</div><div class="ttdoc">Gets the number of reactions in the set.</div><div class="ttdef"><b>Definition</b> reaction.h:903</div></div>
+<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></div><div class="ttdef"><b>Definition</b> reaction.h:845</div></div>
+<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_af14cf34d7367cb6a6be5191724c2d4cf"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::reaction::ReactionSet::size</a></div><div class="ttdeci">size_t size() const</div><div class="ttdoc">Gets the number of reactions in the set.</div><div class="ttdef"><b>Definition</b> reaction.h:908</div></div>
 </div><!-- fragment --> </dd></dl>
 
 <p>Implemented in <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#adcefccb171b339350a9b4a61d89adbbc">gridfire::policy::MainSequencePolicy</a>, and <a class="el" href="class_py_network_policy.html#af0b892e995f58375144bd5559cf2b4c9">PyNetworkPolicy</a>.</p>
@@ -381,6 +382,33 @@ Public Member Functions</h2></td></tr>
 
 <p>Implemented in <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a041b0a99120efdc6abae312c568a9e15">gridfire::policy::MainSequencePolicy</a>, and <a class="el" href="class_py_network_policy.html#a1d685fd5eb346871af5b8ed677dfcf36">PyNetworkPolicy</a>.</p>
 
+</div>
+</div>
+<a id="a07ae9888263f627d8a3516ecf6a0cf9b" name="a07ae9888263f627d8a3516ecf6a0cf9b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a07ae9888263f627d8a3516ecf6a0cf9b">&#9670;&#160;</a></span>get_stack_scratch_blob()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &gt; gridfire::policy::NetworkPolicy::get_stack_scratch_blob </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implemented in <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#ad0376d9982ee21d37d7a5fe60e408765">gridfire::policy::MainSequencePolicy</a>, and <a class="el" href="class_py_network_policy.html#a4d38691a737afcc0ae32fa3d80824c0b">PyNetworkPolicy</a>.</p>
+
 </div>
 </div>
 <a id="a3d0f2aee8ead71da4d421fb659fb30f7" name="a3d0f2aee8ead71da4d421fb659fb30f7"></a>
@@ -410,8 +438,8 @@ Public Member Functions</h2></td></tr>
 <p>The status reports whether the policy has been initialized and whether the constructed network satisfies the policy's key requirements.</p>
 <dl class="section user"><dt>Example</dt><dd><div class="fragment"><div class="line"><a class="code hl_enumeration" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109">NetworkPolicyStatus</a> s = <a class="code hl_namespace" href="namespacegridfire_1_1policy.html">policy</a>.getStatus();</div>
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-<div class="ttc" id="anamespacegridfire_1_1policy_html_a0f52cd334fb84998d9c68430a41f6109"><div class="ttname"><a href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109">gridfire::policy::NetworkPolicyStatus</a></div><div class="ttdeci">NetworkPolicyStatus</div><div class="ttdoc">Lifecycle/verification status for a NetworkPolicy instance.</div><div class="ttdef"><b>Definition</b> policy_abstract.h:38</div></div>
-<div class="ttc" id="anamespacegridfire_1_1policy_html_a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e"><div class="ttname"><a href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e">gridfire::policy::NetworkPolicyStatus::INITIALIZED_VERIFIED</a></div><div class="ttdeci">@ INITIALIZED_VERIFIED</div><div class="ttdef"><b>Definition</b> policy_abstract.h:43</div></div>
+<div class="ttc" id="anamespacegridfire_1_1policy_html_a0f52cd334fb84998d9c68430a41f6109"><div class="ttname"><a href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109">gridfire::policy::NetworkPolicyStatus</a></div><div class="ttdeci">NetworkPolicyStatus</div><div class="ttdoc">Lifecycle/verification status for a NetworkPolicy instance.</div><div class="ttdef"><b>Definition</b> policy_abstract.h:40</div></div>
+<div class="ttc" id="anamespacegridfire_1_1policy_html_a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e"><div class="ttname"><a href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e">gridfire::policy::NetworkPolicyStatus::INITIALIZED_VERIFIED</a></div><div class="ttdeci">@ INITIALIZED_VERIFIED</div><div class="ttdef"><b>Definition</b> policy_abstract.h:45</div></div>
 </div><!-- fragment --> </dd></dl>
 
 <p>Implemented in <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a1ecfb6ea2e18e8cf55228f80ee5c50ed">gridfire::policy::MainSequencePolicy</a>, and <a class="el" href="class_py_network_policy.html#a8506a1f9c22d47c266abe1519ffb9bc0">PyNetworkPolicy</a>.</p>
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index 0fae8c2b..14b3aff1 100644
--- a/docs/html/classgridfire_1_1policy_1_1_network_policy.js
+++ b/docs/html/classgridfire_1_1policy_1_1_network_policy.js
@@ -1,12 +1,13 @@
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-    [ "construct", "classgridfire_1_1policy_1_1_network_policy.html#a13cd74c967592392b01d8fe9a5b34d88", null ],
+    [ "construct", "classgridfire_1_1policy_1_1_network_policy.html#a1ee276d40dfdfe1bf313b29436cbcfba", null ],
     [ "get_engine_stack", "classgridfire_1_1policy_1_1_network_policy.html#a92891fe37b8684fe9f1c5958674de2d5", null ],
     [ "get_engine_types_stack", "classgridfire_1_1policy_1_1_network_policy.html#aac63625678d287d0ca36c98f51e86dd2", null ],
     [ "get_partition_function", "classgridfire_1_1policy_1_1_network_policy.html#a1c395eb83b0bcf728db230e7772aabcf", null ],
     [ "get_seed_reactions", "classgridfire_1_1policy_1_1_network_policy.html#aa33fcee020f5acd8e14aadaf3758ad2f", null ],
     [ "get_seed_species", "classgridfire_1_1policy_1_1_network_policy.html#afb599d76b423f7a39b322c967302b49b", null ],
+    [ "get_stack_scratch_blob", "classgridfire_1_1policy_1_1_network_policy.html#a07ae9888263f627d8a3516ecf6a0cf9b", null ],
     [ "get_status", "classgridfire_1_1policy_1_1_network_policy.html#a3d0f2aee8ead71da4d421fb659fb30f7", null ],
     [ "name", "classgridfire_1_1policy_1_1_network_policy.html#aa59c1baf7077a5d35d45ff753b32a565", null ]
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diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy-members.html
index 73a12aa0..6878585b 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy.html
index 08b2a2d1..b9365a60 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_chain_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy-members.html
index 9efc25bc..e0dcc970 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html
index 751789b0..d022dd2b 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy-members.html
index e4ee9737..b4b41a06 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html
index 58404e03..6dac42dd 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy-members.html
index 9cb157d5..97012914 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html
index 3aaa376a..f41e1a7e 100644
--- a/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy-members.html
index e09cea02..4e7d26b9 100644
--- a/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy.html
index a057042b..3d2f32d3 100644
--- a/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_reaction_chain_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -151,7 +151,7 @@ Friends</h2></td></tr>
 <div class="line"><span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a>&amp; reactions = pp.<a class="code hl_function" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#ae689a0dfeb36f85ddc6db5a8dc4f630a">get_reactions</a>();</div>
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-<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></div><div class="ttdef"><b>Definition</b> reaction.h:842</div></div>
+<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></div><div class="ttdef"><b>Definition</b> reaction.h:845</div></div>
 </div><!-- fragment --></dd></dl>
 <dl class="section note"><dt>Note</dt><dd>Concrete implementations may throw exceptions on construction if the underlying reaction database (e.g. REACLIB) does not include requested reactions. See <code><a class="el" href="chains_8h.html" title="Concrete implementations of ReactionChainPolicy for key stellar reaction chains.">chains.h</a></code> for details. </dd></dl>
 </div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
@@ -289,7 +289,7 @@ Friends</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&amp; reference to the chain's reactions.</dd></dl>
 <dl class="section user"><dt>Example</dt><dd><div class="fragment"><div class="line"><span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;set = chainPolicy.get_reactions();</div>
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+<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_af14cf34d7367cb6a6be5191724c2d4cf"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::reaction::ReactionSet::size</a></div><div class="ttdeci">size_t size() const</div><div class="ttdoc">Gets the number of reactions in the set.</div><div class="ttdef"><b>Definition</b> reaction.h:908</div></div>
 </div><!-- fragment --></dd></dl>
 <dl class="exception"><dt>Exceptions</dt><dd>
   <table class="exception">
diff --git a/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy-members.html
index 7b1e38ac..d95cf67d 100644
--- a/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html
index 114ab0e8..5bd41854 100644
--- a/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy-members.html b/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy-members.html
index f7998e11..b31cc4b8 100644
--- a/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy-members.html
+++ b/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy-members.html
@@ -29,7 +29,7 @@
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   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html b/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html
index 64f88e99..78c5f918 100644
--- a/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html
+++ b/docs/html/classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator-members.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator-members.html
index 78219b19..b9b045a8 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator-members.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html
index 2a18b729..89e71c20 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction-members.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction-members.html
index b336fab9..adcd06be 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction-members.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html
index df1a3d71..7f57fd11 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate-members.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate-members.html
index d99d8e76..b7df7c95 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate-members.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html
index f79b4318..05619edf 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map-members.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map-members.html
index de108a9c..6fddf675 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map-members.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html
index 5a79cac7..5e7b83ec 100644
--- a/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html
+++ b/docs/html/classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html
@@ -29,7 +29,7 @@
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  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1reaction_1_1_logical_reaclib_reaction-members.html b/docs/html/classgridfire_1_1reaction_1_1_logical_reaclib_reaction-members.html
index f2bfe65f..d3268d19 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_logical_reaclib_reaction-members.html
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@@ -951,6 +956,28 @@ template&lt;typename T&gt; </div>
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+      </table>
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+  <td class="mlabels-right">
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     [ "operator<<", "classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#a495ca800cc1dd224ce2a821a825afafd", null ],
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+<text xml:space="preserve" text-anchor="middle" x="452.38" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">&lt; double, double &gt;</text>
+</a>
+</g>
+</g>
+<!-- Node10&#45;&gt;Node1 -->
+<g id="edge10_Node000001_Node000010" class="edge">
+<title>Node10&#45;&gt;Node1</title>
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+<text xml:space="preserve" text-anchor="middle" x="573.25" y="-47.75" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_cached_rates</text>
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diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction-members.html b/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction-members.html
index 578850bd..b220fa81 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction-members.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -125,35 +125,36 @@ $(function(){initNavTree('classgridfire_1_1reaction_1_1_reaclib_reaction.html','
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a06312f834439ccf93012dea53cab47ce">id</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a181b2c75af1f2701c43594c5bb2bac2d">is_reverse</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#adbcb383bac0f47c66251ee1b7c5f539d">m_chapter</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ca86e0f8f95ffb6d87ca295e44f14c5">m_id</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#abab0ed78925789856ebb119d60c6a53d">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a51f658789f34f96e0e6bd42cef5cbfe4">m_peName</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a4c6ba4d6355f33cbe2e72614fa72363f">m_products</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad89d4b413c507e850dba624e1b36b886">m_productsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a498c202a259cbc315997ec68a2cb8a59">m_qValue</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ea3de0412395b7b617c4b71cbc2ab68">m_rateCoefficients</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9ecfb28ccb32904a28217fe2eb0c659d">m_reactants</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#aae29f755030c51fc9c8f7db52a022f84">m_reactantsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af52b42d940f6a09dba5d28898d2b0b1f">m_reverse</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a7e79437a68947e176b8dd7dcbe27baab">m_sourceLabel</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9205126955ad38f56e8aca3112bc150a">num_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8b6008e0f629329bfc62256f4f081b77">operator!=</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae24ad1e38daab536aec6ac72c67e8615">operator&lt;&lt;</a>(std::ostream &amp;os, const ReaclibReaction &amp;r)</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">friend</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae7c930525db447e39b4de18fbc1251a8">operator==</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af775f97f4d5e144e33bc6e0ba58a5851">peName</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a67c8fa4d5929c7a8cbca9b3d9dd2b704">product_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a5f563b99bb550d5bafa2a989502de019">products</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae47931948f12816eb890c0db4fff4d68">qValue</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#adfed51cf788a7ed4770cbd5945ddab2f">rateCoefficients</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a264112a230817a6080c770686e5bcc01">ReaclibReaction</a>(std::string_view id, std::string_view peName, int chapter, const std::vector&lt; fourdst::atomic::Species &gt; &amp;reactants, const std::vector&lt; fourdst::atomic::Species &gt; &amp;products, double qValue, std::string_view label, const RateCoefficientSet &amp;sets, bool reverse=false)</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad85ca288289b25d482cbb8e3ff270028">reactant_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad095aba46860fec0e68386bf04f7f142">reactants</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a96d4ab87de02e9b0be3c248e2e955b4b">sourceLabel</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a57b2695d152360a6ba08776cc760e3a1">stoichiometry</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a0f629cbfe95dc5643b5e3724be0db2f9">stoichiometry</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3c0fbdd07f9a837bd031c5bdc58e0e8f">type</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae2b9b41a598c5f0dcd050b32985ea44e">~ReaclibReaction</a>() override=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a">~Reaction</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3783c87393726976fc4253902e3b7b01">m_hashCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ca86e0f8f95ffb6d87ca295e44f14c5">m_id</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#abab0ed78925789856ebb119d60c6a53d">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a51f658789f34f96e0e6bd42cef5cbfe4">m_peName</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a4c6ba4d6355f33cbe2e72614fa72363f">m_products</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad89d4b413c507e850dba624e1b36b886">m_productsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a498c202a259cbc315997ec68a2cb8a59">m_qValue</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ea3de0412395b7b617c4b71cbc2ab68">m_rateCoefficients</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9ecfb28ccb32904a28217fe2eb0c659d">m_reactants</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#aae29f755030c51fc9c8f7db52a022f84">m_reactantsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af52b42d940f6a09dba5d28898d2b0b1f">m_reverse</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a7e79437a68947e176b8dd7dcbe27baab">m_sourceLabel</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9205126955ad38f56e8aca3112bc150a">num_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8b6008e0f629329bfc62256f4f081b77">operator!=</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae24ad1e38daab536aec6ac72c67e8615">operator&lt;&lt;</a>(std::ostream &amp;os, const ReaclibReaction &amp;r)</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">friend</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae7c930525db447e39b4de18fbc1251a8">operator==</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af775f97f4d5e144e33bc6e0ba58a5851">peName</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a67c8fa4d5929c7a8cbca9b3d9dd2b704">product_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a5f563b99bb550d5bafa2a989502de019">products</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae47931948f12816eb890c0db4fff4d68">qValue</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#adfed51cf788a7ed4770cbd5945ddab2f">rateCoefficients</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a264112a230817a6080c770686e5bcc01">ReaclibReaction</a>(std::string_view id, std::string_view peName, int chapter, const std::vector&lt; fourdst::atomic::Species &gt; &amp;reactants, const std::vector&lt; fourdst::atomic::Species &gt; &amp;products, double qValue, std::string_view label, const RateCoefficientSet &amp;sets, bool reverse=false)</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad85ca288289b25d482cbb8e3ff270028">reactant_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad095aba46860fec0e68386bf04f7f142">reactants</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a96d4ab87de02e9b0be3c248e2e955b4b">sourceLabel</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a57b2695d152360a6ba08776cc760e3a1">stoichiometry</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a0f629cbfe95dc5643b5e3724be0db2f9">stoichiometry</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3c0fbdd07f9a837bd031c5bdc58e0e8f">type</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae2b9b41a598c5f0dcd050b32985ea44e">~ReaclibReaction</a>() override=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a">~Reaction</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.html b/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.html
index 0ca33e5f..33391533 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -252,6 +252,9 @@ Protected Attributes</h2></td></tr>
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+<tr class="memitem:a3783c87393726976fc4253902e3b7b01" id="r_a3783c87393726976fc4253902e3b7b01"><td class="memItemLeft" align="right" valign="top">std::optional&lt; std::size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3783c87393726976fc4253902e3b7b01">m_hashCache</a> = std::nullopt</td></tr>
+<tr class="memdesc:a3783c87393726976fc4253902e3b7b01"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cached hash value for the reaction.  <br /></td></tr>
+<tr class="separator:a3783c87393726976fc4253902e3b7b01"><td class="memSeparator" colspan="2">&#160;</td></tr>
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@@ -1493,6 +1496,30 @@ template&lt;typename T&gt; </div>
 
 <p>Chapter number from the REACLIB database, defining the reaction structure. </p>
 
+</div>
+</div>
+<a id="a3783c87393726976fc4253902e3b7b01" name="a3783c87393726976fc4253902e3b7b01"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3783c87393726976fc4253902e3b7b01">&#9670;&#160;</a></span>m_hashCache</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;std::size_t&gt; gridfire::reaction::ReaclibReaction::m_hashCache = std::nullopt</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel protected">protected</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Cached hash value for the reaction. </p>
+
 </div>
 </div>
 <a id="a8ca86e0f8f95ffb6d87ca295e44f14c5" name="a8ca86e0f8f95ffb6d87ca295e44f14c5"></a>
diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.js b/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.js
index c610ccd8..6148085b 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.js
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaclib_reaction.js
@@ -35,6 +35,7 @@ var classgridfire_1_1reaction_1_1_reaclib_reaction =
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     [ "operator<<", "classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae24ad1e38daab536aec6ac72c67e8615", null ],
     [ "m_chapter", "classgridfire_1_1reaction_1_1_reaclib_reaction.html#adbcb383bac0f47c66251ee1b7c5f539d", null ],
+    [ "m_hashCache", "classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3783c87393726976fc4253902e3b7b01", null ],
     [ "m_id", "classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ca86e0f8f95ffb6d87ca295e44f14c5", null ],
     [ "m_logger", "classgridfire_1_1reaction_1_1_reaclib_reaction.html#abab0ed78925789856ebb119d60c6a53d", null ],
     [ "m_peName", "classgridfire_1_1reaction_1_1_reaclib_reaction.html#a51f658789f34f96e0e6bd42cef5cbfe4", null ],
diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaction-members.html b/docs/html/classgridfire_1_1reaction_1_1_reaction-members.html
index 6e92f95c..1c23a1db 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaction-members.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaction-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaction.html b/docs/html/classgridfire_1_1reaction_1_1_reaction.html
index 7adc685c..f39d7f8e 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaction.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaction.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaction_set-members.html b/docs/html/classgridfire_1_1reaction_1_1_reaction_set-members.html
index 8694e7ed..693acfd8 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaction_set-members.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaction_set-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -120,8 +120,10 @@ $(function(){initNavTree('classgridfire_1_1reaction_1_1_reaction_set.html','');
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a436f9c4b8f8a4e115b19728d57d8e105">end</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222">extend</a>(const ReactionSet &amp;other)</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a85314ee0dde7e12915f63237086b5eb6">get</a>(const std::string_view &amp;id) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a133ad8cca6a75d31ef8efe67801aef1b">getReactionSetSpecies</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#ad28907fc08de978461d68cc5b77a3a99">hash</a>(uint64_t seed) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a58cc2f966674442a2afce377f11efd52">get</a>(size_t index) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a133ad8cca6a75d31ef8efe67801aef1b">getReactionSetSpecies</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#ad28907fc08de978461d68cc5b77a3a99">hash</a>(uint64_t seed) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a718f228a4b4abbfe4bbb35a8fb26d6b9">m_hashCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111">m_id</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4200939ccf088dd83c3d264df171d568">m_reactionHashes</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaction_set.html b/docs/html/classgridfire_1_1reaction_1_1_reaction_set.html
index dd002952..105ace92 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaction_set.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaction_set.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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+<tr class="separator:a58cc2f966674442a2afce377f11efd52"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a1177193b1e46b4e5be630028883ab8dd" id="r_a1177193b1e46b4e5be630028883ab8dd"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1177193b1e46b4e5be630028883ab8dd">remove_reaction</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;reaction)</td></tr>
 <tr class="memdesc:a1177193b1e46b4e5be630028883ab8dd"><td class="mdescLeft">&#160;</td><td class="mdescRight">Removes a reaction from the set.  <br /></td></tr>
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@@ -207,6 +209,8 @@ Private Attributes</h2></td></tr>
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+<tr class="separator:a718f228a4b4abbfe4bbb35a8fb26d6b9"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 Friends</h2></td></tr>
@@ -697,7 +701,7 @@ Friends</h2></td></tr>
 </div>
 </div>
 <a id="a85314ee0dde7e12915f63237086b5eb6" name="a85314ee0dde7e12915f63237086b5eb6"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a85314ee0dde7e12915f63237086b5eb6">&#9670;&#160;</a></span>get()</h2>
+<h2 class="memtitle"><span class="permalink"><a href="#a85314ee0dde7e12915f63237086b5eb6">&#9670;&#160;</a></span>get() <span class="overload">[1/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -719,6 +723,31 @@ Friends</h2></td></tr>
 </table>
 </div><div class="memdoc">
 
+</div>
+</div>
+<a id="a58cc2f966674442a2afce377f11efd52" name="a58cc2f966674442a2afce377f11efd52"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a58cc2f966674442a2afce377f11efd52">&#9670;&#160;</a></span>get() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; gridfire::reaction::ReactionSet::get </td>
+          <td>(</td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>index</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
 </div>
 </div>
 <a id="a133ad8cca6a75d31ef8efe67801aef1b" name="a133ad8cca6a75d31ef8efe67801aef1b"></a>
@@ -1023,6 +1052,28 @@ Friends</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Data Documentation</h2>
+<a id="a718f228a4b4abbfe4bbb35a8fb26d6b9" name="a718f228a4b4abbfe4bbb35a8fb26d6b9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a718f228a4b4abbfe4bbb35a8fb26d6b9">&#9670;&#160;</a></span>m_hashCache</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;uint64_t&gt; gridfire::reaction::ReactionSet::m_hashCache = std::nullopt</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
 <a id="af92e3003b2a3606b48ab857cdedc3111" name="af92e3003b2a3606b48ab857cdedc3111"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#af92e3003b2a3606b48ab857cdedc3111">&#9670;&#160;</a></span>m_id</h2>
 
diff --git a/docs/html/classgridfire_1_1reaction_1_1_reaction_set.js b/docs/html/classgridfire_1_1reaction_1_1_reaction_set.js
index 5c93b745..906d074a 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_reaction_set.js
+++ b/docs/html/classgridfire_1_1reaction_1_1_reaction_set.js
@@ -19,6 +19,7 @@ var classgridfire_1_1reaction_1_1_reaction_set =
     [ "end", "classgridfire_1_1reaction_1_1_reaction_set.html#a436f9c4b8f8a4e115b19728d57d8e105", null ],
     [ "extend", "classgridfire_1_1reaction_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222", null ],
     [ "get", "classgridfire_1_1reaction_1_1_reaction_set.html#a85314ee0dde7e12915f63237086b5eb6", null ],
+    [ "get", "classgridfire_1_1reaction_1_1_reaction_set.html#a58cc2f966674442a2afce377f11efd52", null ],
     [ "getReactionSetSpecies", "classgridfire_1_1reaction_1_1_reaction_set.html#a133ad8cca6a75d31ef8efe67801aef1b", null ],
     [ "hash", "classgridfire_1_1reaction_1_1_reaction_set.html#ad28907fc08de978461d68cc5b77a3a99", null ],
     [ "operator!=", "classgridfire_1_1reaction_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8", null ],
@@ -29,6 +30,7 @@ var classgridfire_1_1reaction_1_1_reaction_set =
     [ "remove_reaction", "classgridfire_1_1reaction_1_1_reaction_set.html#a1177193b1e46b4e5be630028883ab8dd", null ],
     [ "size", "classgridfire_1_1reaction_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf", null ],
     [ "operator<<", "classgridfire_1_1reaction_1_1_reaction_set.html#a5a5e6ed364794f872c2c819536e24c20", null ],
+    [ "m_hashCache", "classgridfire_1_1reaction_1_1_reaction_set.html#a718f228a4b4abbfe4bbb35a8fb26d6b9", null ],
     [ "m_id", "classgridfire_1_1reaction_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111", null ],
     [ "m_logger", "classgridfire_1_1reaction_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb", null ],
     [ "m_reactionHashes", "classgridfire_1_1reaction_1_1_reaction_set.html#a4200939ccf088dd83c3d264df171d568", null ],
diff --git a/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction-members.html b/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction-members.html
index c72afe54..da944981 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction-members.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -125,34 +125,35 @@ $(function(){initNavTree('classgridfire_1_1reaction_1_1_weak_reaclib_reaction.ht
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a06312f834439ccf93012dea53cab47ce">id</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a181b2c75af1f2701c43594c5bb2bac2d">is_reverse</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#adbcb383bac0f47c66251ee1b7c5f539d">m_chapter</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ca86e0f8f95ffb6d87ca295e44f14c5">m_id</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#abab0ed78925789856ebb119d60c6a53d">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a51f658789f34f96e0e6bd42cef5cbfe4">m_peName</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a4c6ba4d6355f33cbe2e72614fa72363f">m_products</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad89d4b413c507e850dba624e1b36b886">m_productsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a498c202a259cbc315997ec68a2cb8a59">m_qValue</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ea3de0412395b7b617c4b71cbc2ab68">m_rateCoefficients</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9ecfb28ccb32904a28217fe2eb0c659d">m_reactants</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#aae29f755030c51fc9c8f7db52a022f84">m_reactantsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af52b42d940f6a09dba5d28898d2b0b1f">m_reverse</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a7e79437a68947e176b8dd7dcbe27baab">m_sourceLabel</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9205126955ad38f56e8aca3112bc150a">num_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8b6008e0f629329bfc62256f4f081b77">operator!=</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae7c930525db447e39b4de18fbc1251a8">operator==</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af775f97f4d5e144e33bc6e0ba58a5851">peName</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a67c8fa4d5929c7a8cbca9b3d9dd2b704">product_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a5f563b99bb550d5bafa2a989502de019">products</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae47931948f12816eb890c0db4fff4d68">qValue</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#adfed51cf788a7ed4770cbd5945ddab2f">rateCoefficients</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#a264112a230817a6080c770686e5bcc01">ReaclibReaction</a>(std::string_view id, std::string_view peName, int chapter, const std::vector&lt; fourdst::atomic::Species &gt; &amp;reactants, const std::vector&lt; fourdst::atomic::Species &gt; &amp;products, double qValue, std::string_view label, const RateCoefficientSet &amp;sets, bool reverse=false)</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html">gridfire::reaction::WeakReaclibReaction</a></td><td class="entry"></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad85ca288289b25d482cbb8e3ff270028">reactant_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad095aba46860fec0e68386bf04f7f142">reactants</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a96d4ab87de02e9b0be3c248e2e955b4b">sourceLabel</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a57b2695d152360a6ba08776cc760e3a1">stoichiometry</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a0f629cbfe95dc5643b5e3724be0db2f9">stoichiometry</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#af191b4afdf41a9916ecf9647e88d8037">type</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html">gridfire::reaction::WeakReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae2b9b41a598c5f0dcd050b32985ea44e">~ReaclibReaction</a>() override=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a">~Reaction</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3783c87393726976fc4253902e3b7b01">m_hashCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ca86e0f8f95ffb6d87ca295e44f14c5">m_id</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#abab0ed78925789856ebb119d60c6a53d">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a51f658789f34f96e0e6bd42cef5cbfe4">m_peName</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a4c6ba4d6355f33cbe2e72614fa72363f">m_products</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad89d4b413c507e850dba624e1b36b886">m_productsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a498c202a259cbc315997ec68a2cb8a59">m_qValue</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8ea3de0412395b7b617c4b71cbc2ab68">m_rateCoefficients</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9ecfb28ccb32904a28217fe2eb0c659d">m_reactants</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#aae29f755030c51fc9c8f7db52a022f84">m_reactantsVec</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af52b42d940f6a09dba5d28898d2b0b1f">m_reverse</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a7e79437a68947e176b8dd7dcbe27baab">m_sourceLabel</a></td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9205126955ad38f56e8aca3112bc150a">num_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8b6008e0f629329bfc62256f4f081b77">operator!=</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae7c930525db447e39b4de18fbc1251a8">operator==</a>(const ReaclibReaction &amp;other) const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af775f97f4d5e144e33bc6e0ba58a5851">peName</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a67c8fa4d5929c7a8cbca9b3d9dd2b704">product_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a5f563b99bb550d5bafa2a989502de019">products</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae47931948f12816eb890c0db4fff4d68">qValue</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#adfed51cf788a7ed4770cbd5945ddab2f">rateCoefficients</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#a264112a230817a6080c770686e5bcc01">ReaclibReaction</a>(std::string_view id, std::string_view peName, int chapter, const std::vector&lt; fourdst::atomic::Species &gt; &amp;reactants, const std::vector&lt; fourdst::atomic::Species &gt; &amp;products, double qValue, std::string_view label, const RateCoefficientSet &amp;sets, bool reverse=false)</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html">gridfire::reaction::WeakReaclibReaction</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad85ca288289b25d482cbb8e3ff270028">reactant_species</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad095aba46860fec0e68386bf04f7f142">reactants</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a96d4ab87de02e9b0be3c248e2e955b4b">sourceLabel</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a57b2695d152360a6ba08776cc760e3a1">stoichiometry</a>(const fourdst::atomic::Species &amp;species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a0f629cbfe95dc5643b5e3724be0db2f9">stoichiometry</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#af191b4afdf41a9916ecf9647e88d8037">type</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html">gridfire::reaction::WeakReaclibReaction</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae2b9b41a598c5f0dcd050b32985ea44e">~ReaclibReaction</a>() override=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html">gridfire::reaction::ReaclibReaction</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a">~Reaction</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html b/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html
index af898ce7..0eef2505 100644
--- a/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html
+++ b/docs/html/classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -254,6 +254,9 @@ Additional Inherited Members</h2></td></tr>
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+<tr class="memitem:a3783c87393726976fc4253902e3b7b01 inherit pro_attribs_classgridfire_1_1reaction_1_1_reaclib_reaction" id="r_a3783c87393726976fc4253902e3b7b01"><td class="memItemLeft" align="right" valign="top">std::optional&lt; std::size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3783c87393726976fc4253902e3b7b01">m_hashCache</a> = std::nullopt</td></tr>
+<tr class="memdesc:a3783c87393726976fc4253902e3b7b01 inherit pro_attribs_classgridfire_1_1reaction_1_1_reaclib_reaction"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cached hash value for the reaction.  <br /></td></tr>
+<tr class="separator:a3783c87393726976fc4253902e3b7b01 inherit pro_attribs_classgridfire_1_1reaction_1_1_reaclib_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a7e79437a68947e176b8dd7dcbe27baab inherit pro_attribs_classgridfire_1_1reaction_1_1_reaclib_reaction" id="r_a7e79437a68947e176b8dd7dcbe27baab"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a7e79437a68947e176b8dd7dcbe27baab">m_sourceLabel</a></td></tr>
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diff --git a/docs/html/classgridfire_1_1screening_1_1_bare_screening_model-members.html b/docs/html/classgridfire_1_1screening_1_1_bare_screening_model-members.html
index d5c8e8ea..79766b0b 100644
--- a/docs/html/classgridfire_1_1screening_1_1_bare_screening_model-members.html
+++ b/docs/html/classgridfire_1_1screening_1_1_bare_screening_model-members.html
@@ -29,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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diff --git a/docs/html/classgridfire_1_1screening_1_1_bare_screening_model.html b/docs/html/classgridfire_1_1screening_1_1_bare_screening_model.html
index 1929a272..20ae618c 100644
--- a/docs/html/classgridfire_1_1screening_1_1_bare_screening_model.html
+++ b/docs/html/classgridfire_1_1screening_1_1_bare_screening_model.html
@@ -29,7 +29,7 @@
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model-members.html b/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model-members.html
index 47c11672..e0c83d52 100644
--- a/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model-members.html
+++ b/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model.html b/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model.html
index 13f82fcf..da68c6c5 100644
--- a/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model.html
+++ b/docs/html/classgridfire_1_1screening_1_1_intermediate_screening_model.html
@@ -29,7 +29,7 @@
  <tbody>
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   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1screening_1_1_screening_model-members.html b/docs/html/classgridfire_1_1screening_1_1_screening_model-members.html
index fe412615..5d51e891 100644
--- a/docs/html/classgridfire_1_1screening_1_1_screening_model-members.html
+++ b/docs/html/classgridfire_1_1screening_1_1_screening_model-members.html
@@ -29,7 +29,7 @@
  <tbody>
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   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1screening_1_1_screening_model.html b/docs/html/classgridfire_1_1screening_1_1_screening_model.html
index 658602f8..6ad8fae5 100644
--- a/docs/html/classgridfire_1_1screening_1_1_screening_model.html
+++ b/docs/html/classgridfire_1_1screening_1_1_screening_model.html
@@ -29,7 +29,7 @@
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   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1screening_1_1_weak_screening_model-members.html b/docs/html/classgridfire_1_1screening_1_1_weak_screening_model-members.html
index 84dd4188..fd67bcf4 100644
--- a/docs/html/classgridfire_1_1screening_1_1_weak_screening_model-members.html
+++ b/docs/html/classgridfire_1_1screening_1_1_weak_screening_model-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1screening_1_1_weak_screening_model.html b/docs/html/classgridfire_1_1screening_1_1_weak_screening_model.html
index 20f8940d..bb2c3126 100644
--- a/docs/html/classgridfire_1_1screening_1_1_weak_screening_model.html
+++ b/docs/html/classgridfire_1_1screening_1_1_weak_screening_model.html
@@ -29,7 +29,7 @@
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1solver_1_1_grid_solver-members.html b/docs/html/classgridfire_1_1solver_1_1_grid_solver-members.html
new file mode 100644
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: Member List</title>
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+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
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+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::GridSolver Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html">gridfire::solver::GridSolver</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html#aba2dba489f9fa8e644606fbf2b913fca">evaluate</a>(SolverContextBase &amp;ctx, const std::vector&lt; NetIn &gt; &amp;netIns) const override</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html">gridfire::solver::GridSolver</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html#ad678bd60b23cd2b88c36bcd6898ccc3f">GridSolver</a>(const engine::DynamicEngine &amp;engine, const SingleZoneDynamicNetworkSolver &amp;solver)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html">gridfire::solver::GridSolver</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a72ca011952a904c0becb0067c369b906">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a72ca011952a904c0becb0067c369b906">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a0c1c9d301507063b2d2b316c0696b188">m_solver</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a0c1c9d301507063b2d2b316c0696b188">m_solver</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a>(const EngineT &amp;engine, const SingleZoneNetworkSolver&lt; EngineT &gt; &amp;solver)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a>(const EngineT &amp;engine, const SingleZoneNetworkSolver&lt; EngineT &gt; &amp;solver)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html#a735386e65c8904137eb3af27bfe0ac1d">~GridSolver</a>() override=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html">gridfire::solver::GridSolver</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a8e5b61c8a13ab247ab88f2b361fa65ff">~MultiZoneNetworkSolver</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a8e5b61c8a13ab247ab88f2b361fa65ff">~MultiZoneNetworkSolver</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
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+<title>GridFire: gridfire::solver::GridSolver Class Reference</title>
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
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+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="classgridfire_1_1solver_1_1_grid_solver-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::GridSolver Class Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;GridSolver.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::solver::GridSolver:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1solver_1_1_grid_solver__inherit__graph.svg" width="227" height="111"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::solver::GridSolver:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1solver_1_1_grid_solver__coll__graph.svg" width="227" height="111"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:ad678bd60b23cd2b88c36bcd6898ccc3f" id="r_ad678bd60b23cd2b88c36bcd6898ccc3f"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad678bd60b23cd2b88c36bcd6898ccc3f">GridSolver</a> (const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;engine, const <a class="el" href="namespacegridfire_1_1solver.html#a3ba32e30d3e30cbbca5ffb22dff077ee">SingleZoneDynamicNetworkSolver</a> &amp;solver)</td></tr>
+<tr class="separator:ad678bd60b23cd2b88c36bcd6898ccc3f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a735386e65c8904137eb3af27bfe0ac1d" id="r_a735386e65c8904137eb3af27bfe0ac1d"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a735386e65c8904137eb3af27bfe0ac1d">~GridSolver</a> () override=default</td></tr>
+<tr class="separator:a735386e65c8904137eb3af27bfe0ac1d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aba2dba489f9fa8e644606fbf2b913fca" id="r_aba2dba489f9fa8e644606fbf2b913fca"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aba2dba489f9fa8e644606fbf2b913fca">evaluate</a> (<a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;ctx, const std::vector&lt; <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &gt; &amp;netIns) const override</td></tr>
+<tr class="separator:aba2dba489f9fa8e644606fbf2b913fca"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td></tr>
+<tr class="memitem:add7bc564ea0cf2490d856f7e47b4813d inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver" id="r_add7bc564ea0cf2490d856f7e47b4813d"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a> (const EngineT &amp;engine, const <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt; EngineT &gt; &amp;solver)</td></tr>
+<tr class="separator:add7bc564ea0cf2490d856f7e47b4813d inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8e5b61c8a13ab247ab88f2b361fa65ff inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver" id="r_a8e5b61c8a13ab247ab88f2b361fa65ff"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a8e5b61c8a13ab247ab88f2b361fa65ff">~MultiZoneNetworkSolver</a> ()=default</td></tr>
+<tr class="separator:a8e5b61c8a13ab247ab88f2b361fa65ff inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:add7bc564ea0cf2490d856f7e47b4813d inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver" id="r_add7bc564ea0cf2490d856f7e47b4813d"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a> (const EngineT &amp;engine, const <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt; EngineT &gt; &amp;solver)</td></tr>
+<tr class="separator:add7bc564ea0cf2490d856f7e47b4813d inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8e5b61c8a13ab247ab88f2b361fa65ff inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver" id="r_a8e5b61c8a13ab247ab88f2b361fa65ff"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a8e5b61c8a13ab247ab88f2b361fa65ff">~MultiZoneNetworkSolver</a> ()=default</td></tr>
+<tr class="separator:a8e5b61c8a13ab247ab88f2b361fa65ff inherit pub_methods_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="inherited" name="inherited"></a>
+Additional Inherited Members</h2></td></tr>
+<tr class="inherit_header pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver')"><img src="closed.png" alt="-"/>&#160;Protected Attributes inherited from <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td></tr>
+<tr class="memitem:a72ca011952a904c0becb0067c369b906 inherit pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver" id="r_a72ca011952a904c0becb0067c369b906"><td class="memItemLeft" align="right" valign="top">const EngineT &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a72ca011952a904c0becb0067c369b906">m_engine</a></td></tr>
+<tr class="memdesc:a72ca011952a904c0becb0067c369b906 inherit pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">The engine used by this solver strategy.  <br /></td></tr>
+<tr class="separator:a72ca011952a904c0becb0067c369b906 inherit pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0c1c9d301507063b2d2b316c0696b188 inherit pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver" id="r_a0c1c9d301507063b2d2b316c0696b188"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt; EngineT &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a0c1c9d301507063b2d2b316c0696b188">m_solver</a></td></tr>
+<tr class="separator:a0c1c9d301507063b2d2b316c0696b188 inherit pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a72ca011952a904c0becb0067c369b906 inherit pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver" id="r_a72ca011952a904c0becb0067c369b906"><td class="memItemLeft" align="right" valign="top">const EngineT &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a72ca011952a904c0becb0067c369b906">m_engine</a></td></tr>
+<tr class="memdesc:a72ca011952a904c0becb0067c369b906 inherit pro_attribs_classgridfire_1_1solver_1_1_multi_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">The engine used by this solver strategy.  <br /></td></tr>
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+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="ad678bd60b23cd2b88c36bcd6898ccc3f" name="ad678bd60b23cd2b88c36bcd6898ccc3f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad678bd60b23cd2b88c36bcd6898ccc3f">&#9670;&#160;</a></span>GridSolver()</h2>
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+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::GridSolver::GridSolver </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1solver.html#a3ba32e30d3e30cbbca5ffb22dff077ee">SingleZoneDynamicNetworkSolver</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>solver</em></span>&#160;)</td>
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+</div><div class="memdoc">
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+<h2 class="memtitle"><span class="permalink"><a href="#a735386e65c8904137eb3af27bfe0ac1d">&#9670;&#160;</a></span>~GridSolver()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::GridSolver::~GridSolver </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="aba2dba489f9fa8e644606fbf2b913fca" name="aba2dba489f9fa8e644606fbf2b913fca"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aba2dba489f9fa8e644606fbf2b913fca">&#9670;&#160;</a></span>evaluate()</h2>
+
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+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt; <a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> &gt; gridfire::solver::GridSolver::evaluate </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>netIns</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
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+<p>Implements <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#ab9f86bfb1e576a2a520bee7b205bf0d1">gridfire::solver::MultiZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a>.</p>
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following files:<ul>
+<li>src/include/gridfire/solver/strategies/<a class="el" href="_grid_solver_8h.html">GridSolver.h</a></li>
+<li>src/lib/solver/strategies/<a class="el" href="_grid_solver_8cpp.html">GridSolver.cpp</a></li>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt; Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#ab9f86bfb1e576a2a520bee7b205bf0d1">evaluate</a>(SolverContextBase &amp;solver_ctx, const std::vector&lt; NetIn &gt; &amp;netIns) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a72ca011952a904c0becb0067c369b906">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a0c1c9d301507063b2d2b316c0696b188">m_solver</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a>(const EngineT &amp;engine, const SingleZoneNetworkSolver&lt; EngineT &gt; &amp;solver)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#a8e5b61c8a13ab247ab88f2b361fa65ff">~MultiZoneNetworkSolver</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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diff --git a/docs/html/classgridfire_1_1solver_1_1_multi_zone_network_solver.html b/docs/html/classgridfire_1_1solver_1_1_multi_zone_network_solver.html
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+<title>GridFire: gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt; Class Template Reference</title>
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+<div id="titlearea">
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pro-attribs">Protected Attributes</a> &#124;
+<a href="classgridfire_1_1solver_1_1_multi_zone_network_solver-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt; Class Template Reference<span class="mlabels"><span class="mlabel abstract">abstract</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;strategy_abstract.h&gt;</code></p>
+<div class="dynheader">
+Collaboration diagram for gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1solver_1_1_multi_zone_network_solver__coll__graph.svg" width="191" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:add7bc564ea0cf2490d856f7e47b4813d" id="r_add7bc564ea0cf2490d856f7e47b4813d"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#add7bc564ea0cf2490d856f7e47b4813d">MultiZoneNetworkSolver</a> (const EngineT &amp;engine, const <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt; EngineT &gt; &amp;solver)</td></tr>
+<tr class="separator:add7bc564ea0cf2490d856f7e47b4813d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8e5b61c8a13ab247ab88f2b361fa65ff" id="r_a8e5b61c8a13ab247ab88f2b361fa65ff"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8e5b61c8a13ab247ab88f2b361fa65ff">~MultiZoneNetworkSolver</a> ()=default</td></tr>
+<tr class="separator:a8e5b61c8a13ab247ab88f2b361fa65ff"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab9f86bfb1e576a2a520bee7b205bf0d1" id="r_ab9f86bfb1e576a2a520bee7b205bf0d1"><td class="memItemLeft" align="right" valign="top">virtual std::vector&lt; <a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab9f86bfb1e576a2a520bee7b205bf0d1">evaluate</a> (<a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;solver_ctx, const std::vector&lt; <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &gt; &amp;netIns) const =0</td></tr>
+<tr class="separator:ab9f86bfb1e576a2a520bee7b205bf0d1"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pro-attribs" name="pro-attribs"></a>
+Protected Attributes</h2></td></tr>
+<tr class="memitem:a72ca011952a904c0becb0067c369b906" id="r_a72ca011952a904c0becb0067c369b906"><td class="memItemLeft" align="right" valign="top">const EngineT &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a72ca011952a904c0becb0067c369b906">m_engine</a></td></tr>
+<tr class="memdesc:a72ca011952a904c0becb0067c369b906"><td class="mdescLeft">&#160;</td><td class="mdescRight">The engine used by this solver strategy.  <br /></td></tr>
+<tr class="separator:a72ca011952a904c0becb0067c369b906"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0c1c9d301507063b2d2b316c0696b188" id="r_a0c1c9d301507063b2d2b316c0696b188"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt; EngineT &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0c1c9d301507063b2d2b316c0696b188">m_solver</a></td></tr>
+<tr class="separator:a0c1c9d301507063b2d2b316c0696b188"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="add7bc564ea0cf2490d856f7e47b4813d" name="add7bc564ea0cf2490d856f7e47b4813d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#add7bc564ea0cf2490d856f7e47b4813d">&#9670;&#160;</a></span>MultiZoneNetworkSolver()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsEngine EngineT&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver</a>&lt; EngineT &gt;::MultiZoneNetworkSolver </td>
+          <td>(</td>
+          <td class="paramtype">const EngineT &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt; EngineT &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>solver</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel explicit">explicit</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a8e5b61c8a13ab247ab88f2b361fa65ff" name="a8e5b61c8a13ab247ab88f2b361fa65ff"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8e5b61c8a13ab247ab88f2b361fa65ff">&#9670;&#160;</a></span>~MultiZoneNetworkSolver()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsEngine EngineT&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver</a>&lt; EngineT &gt;::~<a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">MultiZoneNetworkSolver</a> </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel virtual">virtual</span><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="ab9f86bfb1e576a2a520bee7b205bf0d1" name="ab9f86bfb1e576a2a520bee7b205bf0d1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab9f86bfb1e576a2a520bee7b205bf0d1">&#9670;&#160;</a></span>evaluate()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsEngine EngineT&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual std::vector&lt; <a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> &gt; <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver</a>&lt; EngineT &gt;::evaluate </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>solver_ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>netIns</em></span>&#160;) const</td>
+        </tr>
+      </table>
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+  <td class="mlabels-right">
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+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implemented in <a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html#aba2dba489f9fa8e644606fbf2b913fca">gridfire::solver::GridSolver</a>, and <a class="el" href="class_py_multi_zone_dynamic_network_solver.html#aad0d16a83dcaee1da199e271f0cf10f0">PyMultiZoneDynamicNetworkSolver</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a72ca011952a904c0becb0067c369b906">&#9670;&#160;</a></span>m_engine</h2>
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+      <table class="memname">
+        <tr>
+          <td class="memname">const EngineT&amp; <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver</a>&lt; EngineT &gt;::m_engine</td>
+        </tr>
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+<p>The engine used by this solver strategy. </p>
+
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+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a0c1c9d301507063b2d2b316c0696b188">&#9670;&#160;</a></span>m_solver</h2>
+
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+template&lt;IsEngine EngineT&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
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+          <td class="memname">const <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt;EngineT&gt;&amp; <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">gridfire::solver::MultiZoneNetworkSolver</a>&lt; EngineT &gt;::m_solver</td>
+        </tr>
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+  </td>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::PointSolver Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a>, including all inherited members.</p>
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+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a866bd58075b05c95222dd95abb86ca25">calculate_rhs</a>(sunrealtype t, N_Vector y, N_Vector ydot, const CVODEUserData *data) const</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a153f72c17a795f220ac6f674d2ad4ab6">cvode_error_handler</a>(int line, const char *func, const char *file, const char *msg, SUNErrCode err_code, void *err_user_data, SUNContext sunctx)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#ab0eb347e114510de0dfeb9d86fb40c9d">cvode_jac_wrapper</a>(sunrealtype t, N_Vector y, N_Vector ydot, SUNMatrix J, void *user_data, N_Vector tmp1, N_Vector tmp2, N_Vector tmp3)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a56440c3329be6e245274e612a6048b92">evaluate</a>(SolverContextBase &amp;solver_ctx, const NetIn &amp;netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a017888703ce6de13d4340a268898b7fd">evaluate</a>(SolverContextBase &amp;solver_ctx, const NetIn &amp;netIn, bool displayTrigger, bool forceReinitialize=false) const</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a7bff4ac62f118bb51adba9dee62d6874">getConfig</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a0f0ae9414dec5e9764b3b20592420a5a">initialize_cvode_integration_resources</a>(PointSolverContext *ctx, uint64_t N, size_t numSpecies, double current_time, const fourdst::composition::Composition &amp;composition, double absTol, double relTol, double accumulatedEnergy) const</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a11c00afbad3e94d036e18c9312263091">log_step_diagnostics</a>(PointSolverContext *sctx_p, engine::scratch::StateBlob &amp;ctx, const CVODEUserData &amp;user_data, bool displayJacobianStiffness, bool displaySpeciesBalance, bool to_file, std::optional&lt; std::string &gt; filename) const</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#adfc110027e6e2cc6013c5792bc907a89">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#ac561ab3f8d2fdcf0f4ddcdd2dc8025c6">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a2f6ca4d9a525746c4e037bc3df66096c">PointSolver</a>(const engine::DynamicEngine &amp;engine)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#af67b6bebef730dcd201f4a7f99545d60">PointSolver</a>(const engine::DynamicEngine &amp;engine, const config::GridFireConfig &amp;config)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">gridfire::solver::PointSolver</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">SingleZoneNetworkSolver</a>(const EngineT &amp;engine)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">SingleZoneNetworkSolver</a>(const EngineT &amp;engine)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a2a7c2cff73a98cdae3ef3f6eda7a2c3a">~SingleZoneNetworkSolver</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a2a7c2cff73a98cdae3ef3f6eda7a2c3a">~SingleZoneNetworkSolver</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="header">
+  <div class="summary">
+<a href="#nested-classes">Classes</a> &#124;
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pri-methods">Private Member Functions</a> &#124;
+<a href="#pri-static-methods">Static Private Member Functions</a> &#124;
+<a href="#pri-attribs">Private Attributes</a> &#124;
+<a href="classgridfire_1_1solver_1_1_point_solver-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::PointSolver Class Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Stiff ODE integrator backed by SUNDIALS CVODE (BDF) for network + energy.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;PointSolver.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::solver::PointSolver:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1solver_1_1_point_solver__inherit__graph.svg" width="199" height="126"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::solver::PointSolver:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1solver_1_1_point_solver__coll__graph.svg" width="199" height="126"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
+Classes</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_r_h_s_output_data.html">CVODERHSOutputData</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html">CVODEUserData</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A helper struct to pass C++ context to C-style CVODE callbacks.  <a href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a2f6ca4d9a525746c4e037bc3df66096c" id="r_a2f6ca4d9a525746c4e037bc3df66096c"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2f6ca4d9a525746c4e037bc3df66096c">PointSolver</a> (const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;engine)</td></tr>
+<tr class="memdesc:a2f6ca4d9a525746c4e037bc3df66096c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Construct the CVODE strategy and create a SUNDIALS context.  <br /></td></tr>
+<tr class="separator:a2f6ca4d9a525746c4e037bc3df66096c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af67b6bebef730dcd201f4a7f99545d60" id="r_af67b6bebef730dcd201f4a7f99545d60"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af67b6bebef730dcd201f4a7f99545d60">PointSolver</a> (const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;engine, const <a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a> &amp;config)</td></tr>
+<tr class="separator:af67b6bebef730dcd201f4a7f99545d60"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a7bff4ac62f118bb51adba9dee62d6874"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a56440c3329be6e245274e612a6048b92"><td class="mdescLeft">&#160;</td><td class="mdescRight">Integrate from t=0 to netIn.tMax and return final composition and energy.  <br /></td></tr>
+<tr class="separator:a56440c3329be6e245274e612a6048b92"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a017888703ce6de13d4340a268898b7fd"><td class="mdescLeft">&#160;</td><td class="mdescRight">Call to evaluate which will let the user control if the trigger reasoning is displayed.  <br /></td></tr>
+<tr class="separator:a017888703ce6de13d4340a268898b7fd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td></tr>
+<tr class="memitem:a73803c687b93d07f5c148662cc972e70 inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a73803c687b93d07f5c148662cc972e70"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">SingleZoneNetworkSolver</a> (const EngineT &amp;engine)</td></tr>
+<tr class="memdesc:a73803c687b93d07f5c148662cc972e70 inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructor for the NetworkSolverStrategy.  <br /></td></tr>
+<tr class="separator:a73803c687b93d07f5c148662cc972e70 inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2a7c2cff73a98cdae3ef3f6eda7a2c3a inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a2a7c2cff73a98cdae3ef3f6eda7a2c3a"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a2a7c2cff73a98cdae3ef3f6eda7a2c3a">~SingleZoneNetworkSolver</a> ()=default</td></tr>
+<tr class="memdesc:a2a7c2cff73a98cdae3ef3f6eda7a2c3a inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
+<tr class="separator:a2a7c2cff73a98cdae3ef3f6eda7a2c3a inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a73803c687b93d07f5c148662cc972e70 inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a73803c687b93d07f5c148662cc972e70"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">SingleZoneNetworkSolver</a> (const EngineT &amp;engine)</td></tr>
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+<tr class="separator:a73803c687b93d07f5c148662cc972e70 inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a2a7c2cff73a98cdae3ef3f6eda7a2c3a inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
+<tr class="separator:a2a7c2cff73a98cdae3ef3f6eda7a2c3a inherit pub_methods_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-methods" name="pri-methods"></a>
+Private Member Functions</h2></td></tr>
+<tr class="memitem:a866bd58075b05c95222dd95abb86ca25" id="r_a866bd58075b05c95222dd95abb86ca25"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_r_h_s_output_data.html">CVODERHSOutputData</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a866bd58075b05c95222dd95abb86ca25">calculate_rhs</a> (sunrealtype t, N_Vector y, N_Vector ydot, const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html">CVODEUserData</a> *data) const</td></tr>
+<tr class="memdesc:a866bd58075b05c95222dd95abb86ca25"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compute RHS into ydot at time t from the engine and current state y.  <br /></td></tr>
+<tr class="separator:a866bd58075b05c95222dd95abb86ca25"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0f0ae9414dec5e9764b3b20592420a5a" id="r_a0f0ae9414dec5e9764b3b20592420a5a"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0f0ae9414dec5e9764b3b20592420a5a">initialize_cvode_integration_resources</a> (<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">PointSolverContext</a> *ctx, uint64_t N, size_t numSpecies, double current_time, const fourdst::composition::Composition &amp;composition, double absTol, double relTol, double accumulatedEnergy) const</td></tr>
+<tr class="memdesc:a0f0ae9414dec5e9764b3b20592420a5a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Allocate and initialize CVODE vectors, linear algebra, tolerances, and constraints.  <br /></td></tr>
+<tr class="separator:a0f0ae9414dec5e9764b3b20592420a5a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a11c00afbad3e94d036e18c9312263091" id="r_a11c00afbad3e94d036e18c9312263091"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a11c00afbad3e94d036e18c9312263091">log_step_diagnostics</a> (<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">PointSolverContext</a> *sctx_p, <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;ctx, const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html">CVODEUserData</a> &amp;user_data, bool displayJacobianStiffness, bool displaySpeciesBalance, bool to_file, std::optional&lt; std::string &gt; filename) const</td></tr>
+<tr class="memdesc:a11c00afbad3e94d036e18c9312263091"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compute and print per-component error ratios; run diagnostic helpers.  <br /></td></tr>
+<tr class="separator:a11c00afbad3e94d036e18c9312263091"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-static-methods" name="pri-static-methods"></a>
+Static Private Member Functions</h2></td></tr>
+<tr class="memitem:acbfc90a7439f7a8a377d98571bade26b" id="r_acbfc90a7439f7a8a377d98571bade26b"><td class="memItemLeft" align="right" valign="top">static int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#acbfc90a7439f7a8a377d98571bade26b">cvode_rhs_wrapper</a> (sunrealtype t, N_Vector y, N_Vector ydot, void *user_data)</td></tr>
+<tr class="memdesc:acbfc90a7439f7a8a377d98571bade26b"><td class="mdescLeft">&#160;</td><td class="mdescRight">CVODE RHS C-wrapper that delegates to calculate_rhs and captures exceptions.  <br /></td></tr>
+<tr class="separator:acbfc90a7439f7a8a377d98571bade26b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab0eb347e114510de0dfeb9d86fb40c9d" id="r_ab0eb347e114510de0dfeb9d86fb40c9d"><td class="memItemLeft" align="right" valign="top">static int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab0eb347e114510de0dfeb9d86fb40c9d">cvode_jac_wrapper</a> (sunrealtype t, N_Vector y, N_Vector ydot, SUNMatrix J, void *user_data, N_Vector tmp1, N_Vector tmp2, N_Vector tmp3)</td></tr>
+<tr class="memdesc:ab0eb347e114510de0dfeb9d86fb40c9d"><td class="mdescLeft">&#160;</td><td class="mdescRight">CVODE dense Jacobian C-wrapper that fills SUNDenseMatrix using the engine.  <br /></td></tr>
+<tr class="separator:ab0eb347e114510de0dfeb9d86fb40c9d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a153f72c17a795f220ac6f674d2ad4ab6" id="r_a153f72c17a795f220ac6f674d2ad4ab6"><td class="memItemLeft" align="right" valign="top">static void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a153f72c17a795f220ac6f674d2ad4ab6">cvode_error_handler</a> (int line, const char *func, const char *file, const char *msg, SUNErrCode err_code, void *err_user_data, SUNContext sunctx)</td></tr>
+<tr class="memdesc:a153f72c17a795f220ac6f674d2ad4ab6"><td class="mdescLeft">&#160;</td><td class="mdescRight">CVODE error handler that logs errors and warnings from SUNDIALS using the solver's logger.  <br /></td></tr>
+<tr class="separator:a153f72c17a795f220ac6f674d2ad4ab6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
+Private Attributes</h2></td></tr>
+<tr class="memitem:adfc110027e6e2cc6013c5792bc907a89" id="r_adfc110027e6e2cc6013c5792bc907a89"><td class="memItemLeft" align="right" valign="top">fourdst::config::Config&lt; <a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#adfc110027e6e2cc6013c5792bc907a89">m_config</a></td></tr>
+<tr class="separator:adfc110027e6e2cc6013c5792bc907a89"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ac561ab3f8d2fdcf0f4ddcdd2dc8025c6" id="r_ac561ab3f8d2fdcf0f4ddcdd2dc8025c6"><td class="memItemLeft" align="right" valign="top">quill::Logger *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac561ab3f8d2fdcf0f4ddcdd2dc8025c6">m_logger</a> = fourdst::logging::LogManager::getInstance().getLogger(&quot;log&quot;)</td></tr>
+<tr class="separator:ac561ab3f8d2fdcf0f4ddcdd2dc8025c6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="inherited" name="inherited"></a>
+Additional Inherited Members</h2></td></tr>
+<tr class="inherit_header pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver')"><img src="closed.png" alt="-"/>&#160;Protected Attributes inherited from <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a></td></tr>
+<tr class="memitem:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a7bde224299d4cce01f60a85ec2b0f621"><td class="memItemLeft" align="right" valign="top">const EngineT &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td></tr>
+<tr class="memdesc:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">The engine used by this solver strategy.  <br /></td></tr>
+<tr class="separator:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver" id="r_a7bde224299d4cce01f60a85ec2b0f621"><td class="memItemLeft" align="right" valign="top">const EngineT &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td></tr>
+<tr class="memdesc:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="mdescLeft">&#160;</td><td class="mdescRight">The engine used by this solver strategy.  <br /></td></tr>
+<tr class="separator:a7bde224299d4cce01f60a85ec2b0f621 inherit pro_attribs_classgridfire_1_1solver_1_1_single_zone_network_solver"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Stiff ODE integrator backed by SUNDIALS CVODE (BDF) for network + energy. </p>
+<p>Integrates the nuclear network abundances along with a final accumulator entry for specific energy using CVODE's BDF method and a dense linear solver. The state vector layout is: [y_0, y_1, ..., y_{N-1}, eps], where eps is the accumulated specific energy (erg/g).</p>
+<p>Implementation summary:</p><ul>
+<li>Creates a SUNContext and CVODE memory; initializes the state from a Composition.</li>
+<li>Enforces non-negativity on species via CVodeSetConstraints (&gt;= 0 for all species slots).</li>
+<li>Uses a user-provided <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> to compute RHS and to fill the dense Jacobian.</li>
+<li>The Jacobian is assembled column-major into a SUNDenseMatrix; the energy row/column is currently set to zero (decoupled from abundances in the linearization).</li>
+<li>An internal trigger can rebuild the engine/network; when triggered, CVODE resources are torn down and recreated with the new network size, preserving the energy accumulator.</li>
+<li>The CVODE RHS wrapper captures exceptions::StaleEngineTrigger from the engine evaluation path as recoverable (return code 1) and stores a copy in user-data for the driver loop.</li>
+</ul>
+<dl class="section user"><dt>Example</dt><dd><div class="fragment"><div class="line"><span class="keyword">using </span>gridfire::solver::CVODESolverStrategy;</div>
+<div class="line"><span class="keyword">using </span>gridfire::solver::NetIn;</div>
+<div class="line"> </div>
+<div class="line">CVODESolverStrategy <a class="code hl_namespace" href="namespacegridfire_1_1solver.html">solver</a>(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line"><a class="code hl_struct" href="structgridfire_1_1_net_in.html">NetIn</a> in;</div>
+<div class="line">in.<a class="code hl_variable" href="structgridfire_1_1_net_in.html#a5be0f5195a5cd1dd177b9fc5ab83a7be">temperature</a> = 1.0e9; <span class="comment">// K</span></div>
+<div class="line">in.<a class="code hl_variable" href="structgridfire_1_1_net_in.html#a06f0dff9f8927b7cf2da3004c8fa1577">density</a> = 1.0e6;     <span class="comment">// g/cm^3</span></div>
+<div class="line">in.<a class="code hl_variable" href="structgridfire_1_1_net_in.html#a0a8d820cfeaa92ee31f253795c57e0d1">tMax</a> = 1.0;          <span class="comment">// s</span></div>
+<div class="line">in.<a class="code hl_variable" href="structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1">composition</a> = initialComposition;</div>
+<div class="line"><span class="keyword">auto</span> out = <a class="code hl_namespace" href="namespacegridfire_1_1solver.html">solver</a>.evaluate(in);</div>
+<div class="line">std::cout &lt;&lt; <span class="stringliteral">&quot;Final energy: &quot;</span> &lt;&lt; out.energy &lt;&lt; <span class="stringliteral">&quot; erg/g\n&quot;</span>;</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> GridSolver.h:7</div></div>
+<div class="ttc" id="astructgridfire_1_1_net_in_html"><div class="ttname"><a href="structgridfire_1_1_net_in.html">gridfire::NetIn</a></div><div class="ttdef"><b>Definition</b> types.h:27</div></div>
+<div class="ttc" id="astructgridfire_1_1_net_in_html_a06f0dff9f8927b7cf2da3004c8fa1577"><div class="ttname"><a href="structgridfire_1_1_net_in.html#a06f0dff9f8927b7cf2da3004c8fa1577">gridfire::NetIn::density</a></div><div class="ttdeci">double density</div><div class="ttdoc">Density in g/cm^3.</div><div class="ttdef"><b>Definition</b> types.h:32</div></div>
+<div class="ttc" id="astructgridfire_1_1_net_in_html_a0a8d820cfeaa92ee31f253795c57e0d1"><div class="ttname"><a href="structgridfire_1_1_net_in.html#a0a8d820cfeaa92ee31f253795c57e0d1">gridfire::NetIn::tMax</a></div><div class="ttdeci">double tMax</div><div class="ttdoc">Maximum time.</div><div class="ttdef"><b>Definition</b> types.h:29</div></div>
+<div class="ttc" id="astructgridfire_1_1_net_in_html_a13058f4929e72c1187abbebcddb8aed1"><div class="ttname"><a href="structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1">gridfire::NetIn::composition</a></div><div class="ttdeci">fourdst::composition::Composition composition</div><div class="ttdoc">Composition of the network.</div><div class="ttdef"><b>Definition</b> types.h:28</div></div>
+<div class="ttc" id="astructgridfire_1_1_net_in_html_a5be0f5195a5cd1dd177b9fc5ab83a7be"><div class="ttname"><a href="structgridfire_1_1_net_in.html#a5be0f5195a5cd1dd177b9fc5ab83a7be">gridfire::NetIn::temperature</a></div><div class="ttdeci">double temperature</div><div class="ttdoc">Temperature in Kelvin.</div><div class="ttdef"><b>Definition</b> types.h:31</div></div>
+</div><!-- fragment --> </dd></dl>
+</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a2f6ca4d9a525746c4e037bc3df66096c" name="a2f6ca4d9a525746c4e037bc3df66096c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2f6ca4d9a525746c4e037bc3df66096c">&#9670;&#160;</a></span>PointSolver() <span class="overload">[1/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::PointSolver::PointSolver </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel explicit">explicit</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Construct the CVODE strategy and create a SUNDIALS context. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">engine</td><td><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> used for RHS/Jacobian evaluation and network access. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname">std::runtime_error</td><td>If SUNContext_Create fails. </td></tr>
+  </table>
+  </dd>
+</dl>
+
+</div>
+</div>
+<a id="af67b6bebef730dcd201f4a7f99545d60" name="af67b6bebef730dcd201f4a7f99545d60"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af67b6bebef730dcd201f4a7f99545d60">&#9670;&#160;</a></span>PointSolver() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::PointSolver::PointSolver </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>config</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a866bd58075b05c95222dd95abb86ca25" name="a866bd58075b05c95222dd95abb86ca25"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a866bd58075b05c95222dd95abb86ca25">&#9670;&#160;</a></span>calculate_rhs()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_r_h_s_output_data.html">PointSolver::CVODERHSOutputData</a> gridfire::solver::PointSolver::calculate_rhs </td>
+          <td>(</td>
+          <td class="paramtype">sunrealtype</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>y</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>ydot</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html">CVODEUserData</a> *</td>          <td class="paramname"><span class="paramname"><em>data</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Compute RHS into ydot at time t from the engine and current state y. </p>
+<p>Converts the CVODE state to a Composition (mass fractions) and calls engine.calculateRHSAndEnergy(T9, rho). Negative small abundances are clamped to zero before constructing Composition. On stale engine, throws exceptions::StaleEngineTrigger. </p>
+
+</div>
+</div>
+<a id="a153f72c17a795f220ac6f674d2ad4ab6" name="a153f72c17a795f220ac6f674d2ad4ab6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a153f72c17a795f220ac6f674d2ad4ab6">&#9670;&#160;</a></span>cvode_error_handler()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolver::cvode_error_handler </td>
+          <td>(</td>
+          <td class="paramtype">int</td>          <td class="paramname"><span class="paramname"><em>line</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const char *</td>          <td class="paramname"><span class="paramname"><em>func</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const char *</td>          <td class="paramname"><span class="paramname"><em>file</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const char *</td>          <td class="paramname"><span class="paramname"><em>msg</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">SUNErrCode</td>          <td class="paramname"><span class="paramname"><em>err_code</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>err_user_data</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">SUNContext</td>          <td class="paramname"><span class="paramname"><em>sunctx</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>CVODE error handler that logs errors and warnings from SUNDIALS using the solver's logger. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">line</td><td></td></tr>
+    <tr><td class="paramname">func</td><td></td></tr>
+    <tr><td class="paramname">file</td><td></td></tr>
+    <tr><td class="paramname">msg</td><td></td></tr>
+    <tr><td class="paramname">err_code</td><td></td></tr>
+    <tr><td class="paramname">err_user_data</td><td></td></tr>
+    <tr><td class="paramname">sunctx</td><td></td></tr>
+  </table>
+  </dd>
+</dl>
+
+</div>
+</div>
+<a id="ab0eb347e114510de0dfeb9d86fb40c9d" name="ab0eb347e114510de0dfeb9d86fb40c9d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab0eb347e114510de0dfeb9d86fb40c9d">&#9670;&#160;</a></span>cvode_jac_wrapper()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">int gridfire::solver::PointSolver::cvode_jac_wrapper </td>
+          <td>(</td>
+          <td class="paramtype">sunrealtype</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>y</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>ydot</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">SUNMatrix</td>          <td class="paramname"><span class="paramname"><em>J</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>user_data</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>tmp1</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>tmp2</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>tmp3</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>CVODE dense Jacobian C-wrapper that fills SUNDenseMatrix using the engine. </p>
+<p>Assembles J(i,j) = d(f_i)/d(y_j) for all species using engine-&gt;getJacobianMatrixEntry, then zeros the last row and column corresponding to the energy variable. </p>
+
+</div>
+</div>
+<a id="acbfc90a7439f7a8a377d98571bade26b" name="acbfc90a7439f7a8a377d98571bade26b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acbfc90a7439f7a8a377d98571bade26b">&#9670;&#160;</a></span>cvode_rhs_wrapper()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">int gridfire::solver::PointSolver::cvode_rhs_wrapper </td>
+          <td>(</td>
+          <td class="paramtype">sunrealtype</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>y</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">N_Vector</td>          <td class="paramname"><span class="paramname"><em>ydot</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>user_data</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>CVODE RHS C-wrapper that delegates to calculate_rhs and captures exceptions. </p>
+<dl class="section return"><dt>Returns</dt><dd>0 on success; 1 on recoverable StaleEngineTrigger; -1 on other failures. </dd></dl>
+
+</div>
+</div>
+<a id="a56440c3329be6e245274e612a6048b92" name="a56440c3329be6e245274e612a6048b92"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a56440c3329be6e245274e612a6048b92">&#9670;&#160;</a></span>evaluate() <span class="overload">[1/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> gridfire::solver::PointSolver::evaluate </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>solver_ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Integrate from t=0 to netIn.tMax and return final composition and energy. </p>
+<p>Implementation summary:</p><ul>
+<li>Converts temperature to T9, initializes CVODE memory and state (size = numSpecies + 1).</li>
+<li>Repeatedly calls CVode in single-step or normal mode depending on stdout logging.</li>
+<li>Wraps RHS to capture exceptions::StaleEngineTrigger as a recoverable step failure; if present after a step, it is rethrown for upstream handling.</li>
+<li>Prints/collects diagnostics per step (step size, energy, solver iterations).</li>
+<li>On trigger activation, rebuilds CVODE resources to reflect a changed network and reinitialized the state using the latest engine composition, preserving energy.</li>
+<li>At the end, converts molar abundances to mass fractions and assembles <a class="el" href="structgridfire_1_1_net_out.html">NetOut</a>, including derivatives of energy w.r.t. T and rho from the engine.</li>
+</ul>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">solver_ctx</td><td></td></tr>
+    <tr><td class="paramname">netIn</td><td>Inputs: temperature [K], density [g cm^-3], tMax [s], composition. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> containing final Composition, accumulated energy [erg/g], step count, and dEps/dT, dEps/dRho. </dd></dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname">std::runtime_error</td><td>If any CVODE or SUNDIALS call fails (negative return codes), or if internal consistency checks fail during engine updates. </td></tr>
+    <tr><td class="paramname">exceptions::StaleEngineTrigger</td><td>Propagated if the engine signals a stale state during RHS evaluation (captured in the wrapper then rethrown here). </td></tr>
+  </table>
+  </dd>
+</dl>
+
+<p>Implements <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#abc4e0a88955a1bbac7886132240ca02d">gridfire::solver::SingleZoneNetworkSolver&lt; engine::DynamicEngine &gt;</a>.</p>
+
+</div>
+</div>
+<a id="a017888703ce6de13d4340a268898b7fd" name="a017888703ce6de13d4340a268898b7fd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a017888703ce6de13d4340a268898b7fd">&#9670;&#160;</a></span>evaluate() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> gridfire::solver::PointSolver::evaluate </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>solver_ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>displayTrigger</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>forceReinitialize</em></span><span class="paramdefsep"> = </span><span class="paramdefval">false</span>&#160;) const</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Call to evaluate which will let the user control if the trigger reasoning is displayed. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">solver_ctx</td><td></td></tr>
+    <tr><td class="paramname">netIn</td><td>Inputs: temperature [K], density [g cm^-3], tMax [s], composition. </td></tr>
+    <tr><td class="paramname">displayTrigger</td><td>Boolean flag to control if trigger reasoning is displayed </td></tr>
+    <tr><td class="paramname">forceReinitialize</td><td>Boolean flag to force reinitialization of CVODE resources at the start </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> containing final Composition, accumulated energy [erg/g], step count, and dEps/dT, dEps/dRho. </dd></dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname">std::runtime_error</td><td>If any CVODE or SUNDIALS call fails (negative return codes), or if internal consistency checks fail during engine updates. </td></tr>
+    <tr><td class="paramname">exceptions::StaleEngineTrigger</td><td>Propagated if the engine signals a stale state during RHS evaluation (captured in the wrapper then rethrown here). </td></tr>
+  </table>
+  </dd>
+</dl>
+
+</div>
+</div>
+<a id="a7bff4ac62f118bb51adba9dee62d6874" name="a7bff4ac62f118bb51adba9dee62d6874"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7bff4ac62f118bb51adba9dee62d6874">&#9670;&#160;</a></span>getConfig()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a> gridfire::solver::PointSolver::getConfig </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a0f0ae9414dec5e9764b3b20592420a5a" name="a0f0ae9414dec5e9764b3b20592420a5a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0f0ae9414dec5e9764b3b20592420a5a">&#9670;&#160;</a></span>initialize_cvode_integration_resources()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolver::initialize_cvode_integration_resources </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">PointSolverContext</a> *</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">uint64_t</td>          <td class="paramname"><span class="paramname"><em>N</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>numSpecies</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>current_time</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>composition</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>absTol</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>relTol</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>accumulatedEnergy</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Allocate and initialize CVODE vectors, linear algebra, tolerances, and constraints. </p>
+<p>State vector m_Y is sized to N (numSpecies + 1). Species slots are initialized from Composition molar abundances when present, otherwise a tiny positive value; the last slot is set to accumulatedEnergy. Sets scalar tolerances, non-negativity constraints for species, maximum step size, creates a dense matrix and dense linear solver, and registers the Jacobian. </p>
+
+</div>
+</div>
+<a id="a11c00afbad3e94d036e18c9312263091" name="a11c00afbad3e94d036e18c9312263091"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a11c00afbad3e94d036e18c9312263091">&#9670;&#160;</a></span>log_step_diagnostics()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolver::log_step_diagnostics </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">PointSolverContext</a> *</td>          <td class="paramname"><span class="paramname"><em>sctx_p</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html">CVODEUserData</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>user_data</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>displayJacobianStiffness</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>displaySpeciesBalance</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>to_file</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">std::optional&lt; std::string &gt;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Compute and print per-component error ratios; run diagnostic helpers. </p>
+<p>Gathers CVODE's estimated local errors, converts the state to a Composition, and prints a sorted table of species with the highest error ratios; then invokes diagnostic routines to inspect Jacobian stiffness and species balance. </p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="adfc110027e6e2cc6013c5792bc907a89" name="adfc110027e6e2cc6013c5792bc907a89"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adfc110027e6e2cc6013c5792bc907a89">&#9670;&#160;</a></span>m_config</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">fourdst::config::Config&lt;<a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html">config::GridFireConfig</a>&gt; gridfire::solver::PointSolver::m_config</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt; Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#abc4e0a88955a1bbac7886132240ca02d">evaluate</a>(SolverContextBase &amp;solver_ctx, const NetIn &amp;netIn) const =0</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">SingleZoneNetworkSolver</a>(const EngineT &amp;engine)</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a2a7c2cff73a98cdae3ef3f6eda7a2c3a">~SingleZoneNetworkSolver</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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diff --git a/docs/html/classgridfire_1_1solver_1_1_single_zone_network_solver.html b/docs/html/classgridfire_1_1solver_1_1_single_zone_network_solver.html
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+<title>GridFire: gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt; Class Template Reference</title>
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+<table cellspacing="0" cellpadding="0">
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
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+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pro-attribs">Protected Attributes</a> &#124;
+<a href="classgridfire_1_1solver_1_1_single_zone_network_solver-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt; Class Template Reference<span class="mlabels"><span class="mlabel abstract">abstract</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Abstract base class for network solver strategies.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;strategy_abstract.h&gt;</code></p>
+<div class="dynheader">
+Collaboration diagram for gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1solver_1_1_single_zone_network_solver__coll__graph.svg" width="219" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a73803c687b93d07f5c148662cc972e70" id="r_a73803c687b93d07f5c148662cc972e70"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a73803c687b93d07f5c148662cc972e70">SingleZoneNetworkSolver</a> (const EngineT &amp;engine)</td></tr>
+<tr class="memdesc:a73803c687b93d07f5c148662cc972e70"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructor for the NetworkSolverStrategy.  <br /></td></tr>
+<tr class="separator:a73803c687b93d07f5c148662cc972e70"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2a7c2cff73a98cdae3ef3f6eda7a2c3a" id="r_a2a7c2cff73a98cdae3ef3f6eda7a2c3a"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2a7c2cff73a98cdae3ef3f6eda7a2c3a">~SingleZoneNetworkSolver</a> ()=default</td></tr>
+<tr class="memdesc:a2a7c2cff73a98cdae3ef3f6eda7a2c3a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor.  <br /></td></tr>
+<tr class="separator:a2a7c2cff73a98cdae3ef3f6eda7a2c3a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:abc4e0a88955a1bbac7886132240ca02d" id="r_abc4e0a88955a1bbac7886132240ca02d"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="structgridfire_1_1_net_out.html">NetOut</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#abc4e0a88955a1bbac7886132240ca02d">evaluate</a> (<a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;solver_ctx, const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;netIn) const =0</td></tr>
+<tr class="memdesc:abc4e0a88955a1bbac7886132240ca02d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluates the network for a given timestep.  <br /></td></tr>
+<tr class="separator:abc4e0a88955a1bbac7886132240ca02d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pro-attribs" name="pro-attribs"></a>
+Protected Attributes</h2></td></tr>
+<tr class="memitem:a7bde224299d4cce01f60a85ec2b0f621" id="r_a7bde224299d4cce01f60a85ec2b0f621"><td class="memItemLeft" align="right" valign="top">const EngineT &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7bde224299d4cce01f60a85ec2b0f621">m_engine</a></td></tr>
+<tr class="memdesc:a7bde224299d4cce01f60a85ec2b0f621"><td class="mdescLeft">&#160;</td><td class="mdescRight">The engine used by this solver strategy.  <br /></td></tr>
+<tr class="separator:a7bde224299d4cce01f60a85ec2b0f621"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><div class="compoundTemplParams">template&lt;IsEngine EngineT&gt;<br />
+class gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</div><p>Abstract base class for network solver strategies. </p>
+<p>This class defines the interface for network solver strategies, which are responsible for integrating the reaction network ODEs over a given timestep. It is templated on the engine type to allow for different engine implementations to be used with the same solver.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">EngineT</td><td>The type of engine to use with this solver strategy. Must inherit from <a class="el" href="classgridfire_1_1engine_1_1_engine.html" title="Abstract base class for a reaction network engine.">Engine</a>. </td></tr>
+  </table>
+  </dd>
+</dl>
+</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a73803c687b93d07f5c148662cc972e70" name="a73803c687b93d07f5c148662cc972e70"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a73803c687b93d07f5c148662cc972e70">&#9670;&#160;</a></span>SingleZoneNetworkSolver()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsEngine EngineT&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver</a>&lt; EngineT &gt;::SingleZoneNetworkSolver </td>
+          <td>(</td>
+          <td class="paramtype">const EngineT &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel explicit">explicit</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Constructor for the NetworkSolverStrategy. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">engine</td><td>The engine to use for evaluating the network. </td></tr>
+  </table>
+  </dd>
+</dl>
+
+</div>
+</div>
+<a id="a2a7c2cff73a98cdae3ef3f6eda7a2c3a" name="a2a7c2cff73a98cdae3ef3f6eda7a2c3a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2a7c2cff73a98cdae3ef3f6eda7a2c3a">&#9670;&#160;</a></span>~SingleZoneNetworkSolver()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsEngine EngineT&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver</a>&lt; EngineT &gt;::~<a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a> </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel virtual">virtual</span><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Virtual destructor. </p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="abc4e0a88955a1bbac7886132240ca02d" name="abc4e0a88955a1bbac7886132240ca02d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abc4e0a88955a1bbac7886132240ca02d">&#9670;&#160;</a></span>evaluate()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsEngine EngineT&gt; </div>
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual <a class="el" href="structgridfire_1_1_net_out.html">NetOut</a> <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">gridfire::solver::SingleZoneNetworkSolver</a>&lt; EngineT &gt;::evaluate </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>solver_ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Evaluates the network for a given timestep. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">solver_ctx</td><td></td></tr>
+    <tr><td class="paramname">engine_ctx</td><td></td></tr>
+    <tr><td class="paramname">netIn</td><td>The input conditions for the network. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>The output conditions after the timestep. </dd></dl>
+
+<p>Implemented in <a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a56440c3329be6e245274e612a6048b92">gridfire::solver::PointSolver</a>, and <a class="el" href="class_py_single_zone_dynamic_network_solver.html#a59893f7cf809d922b6d113ed2cf96881">PySingleZoneDynamicNetworkSolver</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a7bde224299d4cce01f60a85ec2b0f621" name="a7bde224299d4cce01f60a85ec2b0f621"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7bde224299d4cce01f60a85ec2b0f621">&#9670;&#160;</a></span>m_engine</h2>
+
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+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="classgridfire_1_1solver_1_1_timestep_context_base-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::TimestepContextBase Struct Reference<span class="mlabels"><span class="mlabel abstract">abstract</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Base class for solver callback contexts.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;strategy_abstract.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::solver::TimestepContextBase:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1solver_1_1_timestep_context_base__inherit__graph.svg" width="382" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a6c82f2104d1b3f7f1926dddf69912251" id="r_a6c82f2104d1b3f7f1926dddf69912251"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6c82f2104d1b3f7f1926dddf69912251">~TimestepContextBase</a> ()=default</td></tr>
+<tr class="separator:a6c82f2104d1b3f7f1926dddf69912251"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a58b7962bb4196b5f4999576b151250da" id="r_a58b7962bb4196b5f4999576b151250da"><td class="memItemLeft" align="right" valign="top">virtual std::vector&lt; std::tuple&lt; std::string, std::string &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a58b7962bb4196b5f4999576b151250da">describe</a> () const =0</td></tr>
+<tr class="memdesc:a58b7962bb4196b5f4999576b151250da"><td class="mdescLeft">&#160;</td><td class="mdescRight">Describe the context for callback functions.  <br /></td></tr>
+<tr class="separator:a58b7962bb4196b5f4999576b151250da"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Base class for solver callback contexts. </p>
+<p>This struct serves as a base class for contexts that can be passed to solver callbacks, it enforces that derived classes implement a <code>describe</code> method that returns a vector of tuples describing the context that a callback will receive when called. </p>
+</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a6c82f2104d1b3f7f1926dddf69912251" name="a6c82f2104d1b3f7f1926dddf69912251"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6c82f2104d1b3f7f1926dddf69912251">&#9670;&#160;</a></span>~TimestepContextBase()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual gridfire::solver::TimestepContextBase::~TimestepContextBase </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel virtual">virtual</span><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a58b7962bb4196b5f4999576b151250da" name="a58b7962bb4196b5f4999576b151250da"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a58b7962bb4196b5f4999576b151250da">&#9670;&#160;</a></span>describe()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual std::vector&lt; std::tuple&lt; std::string, std::string &gt; &gt; gridfire::solver::TimestepContextBase::describe </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
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+<p>Describe the context for callback functions. </p>
+<dl class="section return"><dt>Returns</dt><dd>A vector of tuples, each containing a string for the parameters name and a string for its type.</dd></dl>
+<p>This method should be overridden by derived classes to provide a description of the context that will be passed to the callback function. The intent of this method is that an end user can investigate the context that will be passed to the callback function, and use this information to craft their own callback function. </p>
+
+<p>Implemented in <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a5307efe7f090f77b17d78a6d789d929b">gridfire::solver::PointSolverTimestepContext</a>, and <a class="el" href="class_py_timestep_context_base.html#af2c7a12c4c9244a9e21e88c3d9451c3a">PyTimestepContextBase</a>.</p>
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/solver/strategies/<a class="el" href="strategy__abstract_8h.html">strategy_abstract.h</a></li>
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diff --git a/docs/html/classgridfire_1_1trigger_1_1_logical_trigger.html b/docs/html/classgridfire_1_1trigger_1_1_logical_trigger.html
index 0fff89e1..8ce525f8 100644
--- a/docs/html/classgridfire_1_1trigger_1_1_logical_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1_logical_trigger.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1trigger_1_1_not_trigger-members.html b/docs/html/classgridfire_1_1trigger_1_1_not_trigger-members.html
index 01a6bc6e..5fb2bd90 100644
--- a/docs/html/classgridfire_1_1trigger_1_1_not_trigger-members.html
+++ b/docs/html/classgridfire_1_1trigger_1_1_not_trigger-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1trigger_1_1_not_trigger.html b/docs/html/classgridfire_1_1trigger_1_1_not_trigger.html
index 8f81676d..18326754 100644
--- a/docs/html/classgridfire_1_1trigger_1_1_not_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1_not_trigger.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1trigger_1_1_or_trigger-members.html b/docs/html/classgridfire_1_1trigger_1_1_or_trigger-members.html
index 912ca0e4..5d7a74e2 100644
--- a/docs/html/classgridfire_1_1trigger_1_1_or_trigger-members.html
+++ b/docs/html/classgridfire_1_1trigger_1_1_or_trigger-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1trigger_1_1_or_trigger.html b/docs/html/classgridfire_1_1trigger_1_1_or_trigger.html
index 143a0c63..935a4d31 100644
--- a/docs/html/classgridfire_1_1trigger_1_1_or_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1_or_trigger.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1trigger_1_1_trigger-members.html b/docs/html/classgridfire_1_1trigger_1_1_trigger-members.html
index 2e9e722d..5ad9ffea 100644
--- a/docs/html/classgridfire_1_1trigger_1_1_trigger-members.html
+++ b/docs/html/classgridfire_1_1trigger_1_1_trigger-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/classgridfire_1_1trigger_1_1_trigger.html b/docs/html/classgridfire_1_1trigger_1_1_trigger.html
index 62c442ab..0e3d845b 100644
--- a/docs/html/classgridfire_1_1trigger_1_1_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1_trigger.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -232,7 +232,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>true if the condition is satisfied; false otherwise. </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#aaefdfa86856f9f7839b6a7fdffa4a579">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a69fbb099f8d13d39602f58fa8aa8e7f2">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ae453a72df20fdd416443ef7867f86b92">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#ac8be54d91e77ed16ae3cca2417d82e0a">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#ae8765656a45319335c2bb90c3fb3d308">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a3855b15459217383647ecdf12bc35775">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a50df7fefee167390522aa258fa6ee960">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a04598611b0807cad395bdd2fbc41a6c2">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#aaefdfa86856f9f7839b6a7fdffa4a579">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a69fbb099f8d13d39602f58fa8aa8e7f2">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ae453a72df20fdd416443ef7867f86b92">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#ac8be54d91e77ed16ae3cca2417d82e0a">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a8da692b030477f3a7d6d703cbcda0359">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#acd14b8c03540cd7eb9534e09729d7b85">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a57b44a91ada7cf5d86f7de18683d1f7c">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a75e4c5c1d58ed7169bce136c6370f34b">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#aa91e16acc6a71d319169cbf9e7cd97ce">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -263,7 +263,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
 
 <p>Human-readable description of this trigger's logic. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a2dcd635c6bdbcfe517adca6e2bd5c408">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#aab88715f3c94437ca7f3fcb1698c69de">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ad8166350329db3e1f50954afbb311a35">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#accb56630df2f57400467d315c61dede6">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa2bb19e4a1e24f6fd7f86d0c80ebbec3">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#ad0dd92f9da6c291c3bd57c0983940035">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a0f412b8f788ab7990e353d62ab7d9a16">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a8ba5a942bb61347851030d1eb6bbaa74">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a2dcd635c6bdbcfe517adca6e2bd5c408">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#aab88715f3c94437ca7f3fcb1698c69de">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ad8166350329db3e1f50954afbb311a35">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#accb56630df2f57400467d315c61dede6">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#ab82a259841ccffe77144b2d82501d43f">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa2bb19e4a1e24f6fd7f86d0c80ebbec3">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#ad0dd92f9da6c291c3bd57c0983940035">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a0f412b8f788ab7990e353d62ab7d9a16">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a8ba5a942bb61347851030d1eb6bbaa74">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -294,7 +294,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
 
 <p>Short, stable name for this trigger (suitable for logs/UI). </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#ab78539e5cd88194ab9e98434793eae3f">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a4a834d24286f9204995bf78fb69f35dc">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#acc3bd2938f7746997fb1d255681d8b20">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a062af4f567dc48c088f1fcfb64cc79ec">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a92a57cea3b58bd7948c3c3fb4f75619b">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a594893c029f044be3119118808470f7a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a87fc9fe6bd8762f148c858452ec30043">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a290e5643eea08726d2fd44a1cd5617d0">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#ab78539e5cd88194ab9e98434793eae3f">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a4a834d24286f9204995bf78fb69f35dc">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#acc3bd2938f7746997fb1d255681d8b20">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a062af4f567dc48c088f1fcfb64cc79ec">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a581983de89c5609110628bd06bf7fb85">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a92a57cea3b58bd7948c3c3fb4f75619b">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a594893c029f044be3119118808470f7a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a87fc9fe6bd8762f148c858452ec30043">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a290e5643eea08726d2fd44a1cd5617d0">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -325,7 +325,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
 
 <p>Total number of times this trigger evaluated to false since last reset. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#addfd61f8cb234881f535fb8f4d618d74">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#ae7776f4a526db3245e64a74a3b0172d3">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a2f9b0d6a6ac54f6371c5a208c06826ea">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a0b3a7f45604dbb27e832d9559dd20997">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa26bf911c73b7f2ec343d473caf13718">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a0e1ad148f9f3232992a4b16e440c249a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a273eb8a3e80d1235d2b3f252e55c5b50">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a94bb1de08a5ff55e1874f595f8c8965c">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#addfd61f8cb234881f535fb8f4d618d74">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#ae7776f4a526db3245e64a74a3b0172d3">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a2f9b0d6a6ac54f6371c5a208c06826ea">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a0b3a7f45604dbb27e832d9559dd20997">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#afa82a63bea2e3675f63786b7658d0315">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa26bf911c73b7f2ec343d473caf13718">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a0e1ad148f9f3232992a4b16e440c249a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a273eb8a3e80d1235d2b3f252e55c5b50">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a94bb1de08a5ff55e1874f595f8c8965c">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -356,7 +356,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
 
 <p>Total number of times this trigger evaluated to true since last reset. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#afffb4281569963183d7db3ed1568eb3a">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a7e5568c9d7799b7f80ad0d3efe2cd143">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ae2d27d72af9e1fbf711a58e4583b43a3">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#afc7d3eae8306ee383d76997ac3803327">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa7cc311316539b2d348422ba907dc64e">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a32980aaf6d9c7632c024b4b74b1d9e70">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a34d285584ea96f71b99eefad8c738296">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#ad2a7c2567b100f97a024f65818ecefed">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#afffb4281569963183d7db3ed1568eb3a">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a7e5568c9d7799b7f80ad0d3efe2cd143">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ae2d27d72af9e1fbf711a58e4583b43a3">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#afc7d3eae8306ee383d76997ac3803327">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a098827751aecb05f416c09782910cd91">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa7cc311316539b2d348422ba907dc64e">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a32980aaf6d9c7632c024b4b74b1d9e70">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a34d285584ea96f71b99eefad8c738296">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#ad2a7c2567b100f97a024f65818ecefed">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -387,7 +387,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
 
 <p>Reset internal state and diagnostics counters. </p>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a2436d8643911ade907e03fb29531ceaa">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#abf218d255bde157540b51cd6a54f6eb1">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#afe337517b77e5433d92ded3a64565141">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#ab42043e55c81bac5d3f981bc139579de">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a0bcab0247b3db618b76bd6769cf9a2ea">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a9b782cbf033ed2023da6b2d55dcefc4e">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#af4034fa431e6c88fd05c50cce31b2fa0">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a0fe6af73b11b820561bd4e5552890d4e">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a2436d8643911ade907e03fb29531ceaa">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#abf218d255bde157540b51cd6a54f6eb1">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#afe337517b77e5433d92ded3a64565141">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#ab42043e55c81bac5d3f981bc139579de">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#ac2033bf03c23cac4092231de15ea5b72">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a0bcab0247b3db618b76bd6769cf9a2ea">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a9b782cbf033ed2023da6b2d55dcefc4e">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#af4034fa431e6c88fd05c50cce31b2fa0">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a0fe6af73b11b820561bd4e5552890d4e">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -424,7 +424,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
   </dd>
 </dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a8e743e8ebe71f9ded835177db6fad908">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a26d0aca39087a1f69e96e0701ca83f81">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a5096cb7e70ea357f28e1b9fc8301c793">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a95a801aafb5aaa9a22566ebf722a1150">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aaef2090ed67a7c27967821f75a61e524">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a8b882c6ba6e267d7051031140bbb7ad6">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#aafc7f40bde2c78f4d100b6f9da771831">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a9723e389aeba05fdb3d4fd1dcc1ba07d">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a8e743e8ebe71f9ded835177db6fad908">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a26d0aca39087a1f69e96e0701ca83f81">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a5096cb7e70ea357f28e1b9fc8301c793">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a95a801aafb5aaa9a22566ebf722a1150">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a0062e03959da6f9e51c10b21c153aa6a">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa3eb221b106c377b692472cb9fc2aa92">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a7db803459fbf78567eed4e2c3ddd3dfd">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ab7acb0bc053cc1d67c6a0d51f98d65d9">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a63dc6196975d115be5f36ad87c19cdb5">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -461,7 +461,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
   </dd>
 </dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a62f7dbbcf0554caa68e3d778580b3c1d">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a0dd783afab7ef6005f0241f9de7b31f6">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a846432abf33c7602af0fbb5475c0ad32">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a775dac97d109c5fcd5c0287ca98f308c">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#ae47bbdf6edae798f30866c1ac4104cc1">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a179cb09a91d5c638d7a347137b208767">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a468bf58f66417493501c59d7a8aabc98">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#af6bff6a484e8729445c26620b489665d">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a62f7dbbcf0554caa68e3d778580b3c1d">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a0dd783afab7ef6005f0241f9de7b31f6">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a846432abf33c7602af0fbb5475c0ad32">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a775dac97d109c5fcd5c0287ca98f308c">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a10060fb599c14ffdd57aceef5f2a6ed8">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a0569c964fb1a2bc1b162aa76c48f19ce">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a02c83c9e0f6e195cd91cf6f69a37622a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ae6c1d1cc68b5ac422e0d606e44c45783">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a6042258a7bf4d8bd53fe9ed176a52143">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
@@ -499,7 +499,7 @@ template&lt;typename TriggerContextStruct&gt; </div>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A <a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> tree with a boolean value and per-cause details. </dd></dl>
 
-<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a01033721e8f5d90483d65c904399cf96">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a3bf0d69122f801deca4b62db47262d9b">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#abfb3eb7befba646ce9f11f36a63750ae">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a7bca0da16353f4b04a2f40fb29c07922">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aedd397b71cd5b1ad26a0b21a34cf5631">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a3af973e466ba62ebf1e41c608355e327">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a9dfab0b765d3a4c362cecd860d59f58a">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a22d8bc7aacbc388108225c26158e918c">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
+<p>Implemented in <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a01033721e8f5d90483d65c904399cf96">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a3bf0d69122f801deca4b62db47262d9b">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#abfb3eb7befba646ce9f11f36a63750ae">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a7bca0da16353f4b04a2f40fb29c07922">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a7384d0e3e67ad6e19a1c7e25cec10ac9">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#af2ac29e690bf7ee3e23dc23991e9a401">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a350a34e34543f35a57785a0c42a4689c">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ad27967c054709ca5ac49998e695731a4">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, and <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a47335ede9fe59cc6e76e670bc4e7218d">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>.</p>
 
 </div>
 </div>
diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger-members.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger-members.html
new file mode 100644
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+<meta name="generator" content="Doxygen 1.13.2"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: Member List</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
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+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
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+<link href="search/search.css" rel="stylesheet" type="text/css"/>
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+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
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+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a48e6bada4d408933a29164f4e5258a65">BoundaryFluxTrigger</a>(double relativeThreshold, double absoluteThreshold)</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a8da692b030477f3a7d6d703cbcda0359">check</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#ab82a259841ccffe77144b2d82501d43f">describe</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a48589e081e3e2c6554a4779de8e3c06b">get_reaction_set_flow</a>(const reaction::ReactionSet &amp;reactions, const gridfire::solver::PointSolverTimestepContext &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho, ReactionSetType type)</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a3c3fbbb057b0c75acd70ec10a4732e68">m_absoluteThreshold</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#ac78208ee8da1a7e73a388b25e5400aa6">m_hits</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a30cce9bc3cf53f6f45a4b4c6e50b5752">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a013be4afebeb6589b66105a9323094c7">m_misses</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a6d556a5700577555527f637f8c94bbb9">m_relativeThreshold</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#aa8b3356aaa40dfa707de8e8cf2e45a2f">m_resets</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a9acbce53a8d454ce7797c3d3f8ae09ef">m_updates</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a581983de89c5609110628bd06bf7fb85">name</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#afa82a63bea2e3675f63786b7658d0315">numMisses</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a098827751aecb05f416c09782910cd91">numTriggers</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a5b910788387e82528b76dbc9334bf8b9">ReactionSetType</a> enum name</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#ac2033bf03c23cac4092231de15ea5b72">reset</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a0062e03959da6f9e51c10b21c153aa6a">step</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a10060fb599c14ffdd57aceef5f2a6ed8">update</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a7384d0e3e67ad6e19a1c7e25cec10ac9">why</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html
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+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pri-types">Private Types</a> &#124;
+<a href="#pri-static-methods">Static Private Member Functions</a> &#124;
+<a href="#pri-attribs">Private Attributes</a> &#124;
+<a href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger Class Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;engine_partitioning_trigger.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::trigger::solver::CVODE::BoundaryFluxTrigger:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger__inherit__graph.svg" width="219" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::trigger::solver::CVODE::BoundaryFluxTrigger:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger__coll__graph.svg" width="219" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a48e6bada4d408933a29164f4e5258a65" id="r_a48e6bada4d408933a29164f4e5258a65"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a48e6bada4d408933a29164f4e5258a65">BoundaryFluxTrigger</a> (double relativeThreshold, double absoluteThreshold)</td></tr>
+<tr class="separator:a48e6bada4d408933a29164f4e5258a65"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8da692b030477f3a7d6d703cbcda0359" id="r_a8da692b030477f3a7d6d703cbcda0359"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8da692b030477f3a7d6d703cbcda0359">check</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const override</td></tr>
+<tr class="memdesc:a8da692b030477f3a7d6d703cbcda0359"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluate the trigger condition against the provided context.  <br /></td></tr>
+<tr class="separator:a8da692b030477f3a7d6d703cbcda0359"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a10060fb599c14ffdd57aceef5f2a6ed8" id="r_a10060fb599c14ffdd57aceef5f2a6ed8"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a10060fb599c14ffdd57aceef5f2a6ed8">update</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) override</td></tr>
+<tr class="memdesc:a10060fb599c14ffdd57aceef5f2a6ed8"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update any internal state with the given context (e.g., counters, windows).  <br /></td></tr>
+<tr class="separator:a10060fb599c14ffdd57aceef5f2a6ed8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0062e03959da6f9e51c10b21c153aa6a" id="r_a0062e03959da6f9e51c10b21c153aa6a"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0062e03959da6f9e51c10b21c153aa6a">step</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) override</td></tr>
+<tr class="memdesc:a0062e03959da6f9e51c10b21c153aa6a"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
+<tr class="separator:a0062e03959da6f9e51c10b21c153aa6a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ac2033bf03c23cac4092231de15ea5b72" id="r_ac2033bf03c23cac4092231de15ea5b72"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac2033bf03c23cac4092231de15ea5b72">reset</a> () override</td></tr>
+<tr class="memdesc:ac2033bf03c23cac4092231de15ea5b72"><td class="mdescLeft">&#160;</td><td class="mdescRight">Reset internal state and diagnostics counters.  <br /></td></tr>
+<tr class="separator:ac2033bf03c23cac4092231de15ea5b72"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a581983de89c5609110628bd06bf7fb85" id="r_a581983de89c5609110628bd06bf7fb85"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a581983de89c5609110628bd06bf7fb85">name</a> () const override</td></tr>
+<tr class="memdesc:a581983de89c5609110628bd06bf7fb85"><td class="mdescLeft">&#160;</td><td class="mdescRight">Short, stable name for this trigger (suitable for logs/UI).  <br /></td></tr>
+<tr class="separator:a581983de89c5609110628bd06bf7fb85"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a7384d0e3e67ad6e19a1c7e25cec10ac9" id="r_a7384d0e3e67ad6e19a1c7e25cec10ac9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7384d0e3e67ad6e19a1c7e25cec10ac9">why</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const override</td></tr>
+<tr class="memdesc:a7384d0e3e67ad6e19a1c7e25cec10ac9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Explain why the last evaluation would be true/false in a structured way.  <br /></td></tr>
+<tr class="separator:a7384d0e3e67ad6e19a1c7e25cec10ac9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab82a259841ccffe77144b2d82501d43f" id="r_ab82a259841ccffe77144b2d82501d43f"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab82a259841ccffe77144b2d82501d43f">describe</a> () const override</td></tr>
+<tr class="memdesc:ab82a259841ccffe77144b2d82501d43f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Human-readable description of this trigger's logic.  <br /></td></tr>
+<tr class="separator:ab82a259841ccffe77144b2d82501d43f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a098827751aecb05f416c09782910cd91" id="r_a098827751aecb05f416c09782910cd91"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a098827751aecb05f416c09782910cd91">numTriggers</a> () const override</td></tr>
+<tr class="memdesc:a098827751aecb05f416c09782910cd91"><td class="mdescLeft">&#160;</td><td class="mdescRight">Total number of times this trigger evaluated to true since last reset.  <br /></td></tr>
+<tr class="separator:a098827751aecb05f416c09782910cd91"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afa82a63bea2e3675f63786b7658d0315" id="r_afa82a63bea2e3675f63786b7658d0315"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#afa82a63bea2e3675f63786b7658d0315">numMisses</a> () const override</td></tr>
+<tr class="memdesc:afa82a63bea2e3675f63786b7658d0315"><td class="mdescLeft">&#160;</td><td class="mdescRight">Total number of times this trigger evaluated to false since last reset.  <br /></td></tr>
+<tr class="separator:afa82a63bea2e3675f63786b7658d0315"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_classgridfire_1_1trigger_1_1_trigger"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1trigger_1_1_trigger')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td></tr>
+<tr class="memitem:a2c077ccbaf4de9f7068e50144391edda inherit pub_methods_classgridfire_1_1trigger_1_1_trigger" id="r_a2c077ccbaf4de9f7068e50144391edda"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a> ()=default</td></tr>
+<tr class="memdesc:a2c077ccbaf4de9f7068e50144391edda inherit pub_methods_classgridfire_1_1trigger_1_1_trigger"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor for polymorphic use.  <br /></td></tr>
+<tr class="separator:a2c077ccbaf4de9f7068e50144391edda inherit pub_methods_classgridfire_1_1trigger_1_1_trigger"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-types" name="pri-types"></a>
+Private Types</h2></td></tr>
+<tr class="memitem:a5b910788387e82528b76dbc9334bf8b9" id="r_a5b910788387e82528b76dbc9334bf8b9"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5b910788387e82528b76dbc9334bf8b9">ReactionSetType</a> : uint8_t { <a class="el" href="#a5b910788387e82528b76dbc9334bf8b9a18ff74f43da410c5529f7d6fca84f115">ACTIVE</a>
+, <a class="el" href="#a5b910788387e82528b76dbc9334bf8b9a6b273343c454f9c53dcfc9c4ccf171d2">INACTIVE</a>
+ }</td></tr>
+<tr class="separator:a5b910788387e82528b76dbc9334bf8b9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-static-methods" name="pri-static-methods"></a>
+Static Private Member Functions</h2></td></tr>
+<tr class="memitem:a48589e081e3e2c6554a4779de8e3c06b" id="r_a48589e081e3e2c6554a4779de8e3c06b"><td class="memItemLeft" align="right" valign="top">static double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a48589e081e3e2c6554a4779de8e3c06b">get_reaction_set_flow</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;reactions, const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx, const fourdst::composition::Composition &amp;comp, double T9, double rho, <a class="el" href="#a5b910788387e82528b76dbc9334bf8b9">ReactionSetType</a> type)</td></tr>
+<tr class="separator:a48589e081e3e2c6554a4779de8e3c06b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
+Private Attributes</h2></td></tr>
+<tr class="memitem:a30cce9bc3cf53f6f45a4b4c6e50b5752" id="r_a30cce9bc3cf53f6f45a4b4c6e50b5752"><td class="memItemLeft" align="right" valign="top">quill::Logger *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a30cce9bc3cf53f6f45a4b4c6e50b5752">m_logger</a> = fourdst::logging::LogManager::getInstance().getLogger(&quot;log&quot;)</td></tr>
+<tr class="separator:a30cce9bc3cf53f6f45a4b4c6e50b5752"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ac78208ee8da1a7e73a388b25e5400aa6" id="r_ac78208ee8da1a7e73a388b25e5400aa6"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac78208ee8da1a7e73a388b25e5400aa6">m_hits</a> = 0</td></tr>
+<tr class="separator:ac78208ee8da1a7e73a388b25e5400aa6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a013be4afebeb6589b66105a9323094c7" id="r_a013be4afebeb6589b66105a9323094c7"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a013be4afebeb6589b66105a9323094c7">m_misses</a> = 0</td></tr>
+<tr class="separator:a013be4afebeb6589b66105a9323094c7"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a9acbce53a8d454ce7797c3d3f8ae09ef" id="r_a9acbce53a8d454ce7797c3d3f8ae09ef"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a9acbce53a8d454ce7797c3d3f8ae09ef">m_updates</a> = 0</td></tr>
+<tr class="separator:a9acbce53a8d454ce7797c3d3f8ae09ef"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa8b3356aaa40dfa707de8e8cf2e45a2f" id="r_aa8b3356aaa40dfa707de8e8cf2e45a2f"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa8b3356aaa40dfa707de8e8cf2e45a2f">m_resets</a> = 0</td></tr>
+<tr class="separator:aa8b3356aaa40dfa707de8e8cf2e45a2f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6d556a5700577555527f637f8c94bbb9" id="r_a6d556a5700577555527f637f8c94bbb9"><td class="memItemLeft" align="right" valign="top">double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6d556a5700577555527f637f8c94bbb9">m_relativeThreshold</a></td></tr>
+<tr class="separator:a6d556a5700577555527f637f8c94bbb9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3c3fbbb057b0c75acd70ec10a4732e68" id="r_a3c3fbbb057b0c75acd70ec10a4732e68"><td class="memItemLeft" align="right" valign="top">double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3c3fbbb057b0c75acd70ec10a4732e68">m_absoluteThreshold</a></td></tr>
+<tr class="separator:a3c3fbbb057b0c75acd70ec10a4732e68"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Enumeration Documentation</h2>
+<a id="a5b910788387e82528b76dbc9334bf8b9" name="a5b910788387e82528b76dbc9334bf8b9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5b910788387e82528b76dbc9334bf8b9">&#9670;&#160;</a></span>ReactionSetType</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">enum class <a class="el" href="#a5b910788387e82528b76dbc9334bf8b9">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::ReactionSetType</a> : uint8_t</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel strong">strong</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+<table class="fieldtable">
+<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="a5b910788387e82528b76dbc9334bf8b9a18ff74f43da410c5529f7d6fca84f115" name="a5b910788387e82528b76dbc9334bf8b9a18ff74f43da410c5529f7d6fca84f115"></a>ACTIVE&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a5b910788387e82528b76dbc9334bf8b9a6b273343c454f9c53dcfc9c4ccf171d2" name="a5b910788387e82528b76dbc9334bf8b9a6b273343c454f9c53dcfc9c4ccf171d2"></a>INACTIVE&#160;</td><td class="fielddoc"></td></tr>
+</table>
+
+</div>
+</div>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a48e6bada4d408933a29164f4e5258a65" name="a48e6bada4d408933a29164f4e5258a65"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a48e6bada4d408933a29164f4e5258a65">&#9670;&#160;</a></span>BoundaryFluxTrigger()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::BoundaryFluxTrigger </td>
+          <td>(</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>relativeThreshold</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>absoluteThreshold</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel explicit">explicit</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a8da692b030477f3a7d6d703cbcda0359" name="a8da692b030477f3a7d6d703cbcda0359"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8da692b030477f3a7d6d703cbcda0359">&#9670;&#160;</a></span>check()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::check </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Evaluate the trigger condition against the provided context. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>Context snapshot (immutable view) used to evaluate the condition. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>true if the condition is satisfied; false otherwise. </dd></dl>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="ab82a259841ccffe77144b2d82501d43f" name="ab82a259841ccffe77144b2d82501d43f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab82a259841ccffe77144b2d82501d43f">&#9670;&#160;</a></span>describe()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::string gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::describe </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Human-readable description of this trigger's logic. </p>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="a48589e081e3e2c6554a4779de8e3c06b" name="a48589e081e3e2c6554a4779de8e3c06b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a48589e081e3e2c6554a4779de8e3c06b">&#9670;&#160;</a></span>get_reaction_set_flow()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::get_reaction_set_flow </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactions</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="#a5b910788387e82528b76dbc9334bf8b9">ReactionSetType</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a581983de89c5609110628bd06bf7fb85" name="a581983de89c5609110628bd06bf7fb85"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a581983de89c5609110628bd06bf7fb85">&#9670;&#160;</a></span>name()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::string gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::name </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Short, stable name for this trigger (suitable for logs/UI). </p>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="afa82a63bea2e3675f63786b7658d0315" name="afa82a63bea2e3675f63786b7658d0315"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afa82a63bea2e3675f63786b7658d0315">&#9670;&#160;</a></span>numMisses()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::numMisses </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Total number of times this trigger evaluated to false since last reset. </p>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="a098827751aecb05f416c09782910cd91" name="a098827751aecb05f416c09782910cd91"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a098827751aecb05f416c09782910cd91">&#9670;&#160;</a></span>numTriggers()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::numTriggers </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Total number of times this trigger evaluated to true since last reset. </p>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="ac2033bf03c23cac4092231de15ea5b72" name="ac2033bf03c23cac4092231de15ea5b72"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac2033bf03c23cac4092231de15ea5b72">&#9670;&#160;</a></span>reset()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::reset </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Reset internal state and diagnostics counters. </p>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="a0062e03959da6f9e51c10b21c153aa6a" name="a0062e03959da6f9e51c10b21c153aa6a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0062e03959da6f9e51c10b21c153aa6a">&#9670;&#160;</a></span>step()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::step </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>similar to update but intended to be run on every step not just those where the trigger triggered </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>Context snapshot used to update state. </td></tr>
+  </table>
+  </dd>
+</dl>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="a10060fb599c14ffdd57aceef5f2a6ed8" name="a10060fb599c14ffdd57aceef5f2a6ed8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a10060fb599c14ffdd57aceef5f2a6ed8">&#9670;&#160;</a></span>update()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::update </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Update any internal state with the given context (e.g., counters, windows). </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>Context snapshot used to update state. </td></tr>
+  </table>
+  </dd>
+</dl>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<a id="a7384d0e3e67ad6e19a1c7e25cec10ac9" name="a7384d0e3e67ad6e19a1c7e25cec10ac9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7384d0e3e67ad6e19a1c7e25cec10ac9">&#9670;&#160;</a></span>why()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::why </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Explain why the last evaluation would be true/false in a structured way. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>Context snapshot for the explanation. </td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>A <a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> tree with a boolean value and per-cause details. </dd></dl>
+
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a3c3fbbb057b0c75acd70ec10a4732e68" name="a3c3fbbb057b0c75acd70ec10a4732e68"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3c3fbbb057b0c75acd70ec10a4732e68">&#9670;&#160;</a></span>m_absoluteThreshold</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::m_absoluteThreshold</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ac78208ee8da1a7e73a388b25e5400aa6" name="ac78208ee8da1a7e73a388b25e5400aa6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac78208ee8da1a7e73a388b25e5400aa6">&#9670;&#160;</a></span>m_hits</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::m_hits = 0</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a30cce9bc3cf53f6f45a4b4c6e50b5752" name="a30cce9bc3cf53f6f45a4b4c6e50b5752"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a30cce9bc3cf53f6f45a4b4c6e50b5752">&#9670;&#160;</a></span>m_logger</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">quill::Logger* gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::m_logger = fourdst::logging::LogManager::getInstance().getLogger(&quot;log&quot;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a013be4afebeb6589b66105a9323094c7" name="a013be4afebeb6589b66105a9323094c7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a013be4afebeb6589b66105a9323094c7">&#9670;&#160;</a></span>m_misses</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::m_misses = 0</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a6d556a5700577555527f637f8c94bbb9" name="a6d556a5700577555527f637f8c94bbb9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6d556a5700577555527f637f8c94bbb9">&#9670;&#160;</a></span>m_relativeThreshold</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::m_relativeThreshold</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aa8b3356aaa40dfa707de8e8cf2e45a2f" name="aa8b3356aaa40dfa707de8e8cf2e45a2f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa8b3356aaa40dfa707de8e8cf2e45a2f">&#9670;&#160;</a></span>m_resets</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::m_resets = 0</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a9acbce53a8d454ce7797c3d3f8ae09ef" name="a9acbce53a8d454ce7797c3d3f8ae09ef"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9acbce53a8d454ce7797c3d3f8ae09ef">&#9670;&#160;</a></span>m_updates</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::trigger::solver::CVODE::BoundaryFluxTrigger::m_updates = 0</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel mutable">mutable</span><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following files:<ul>
+<li>src/include/gridfire/solver/strategies/triggers/<a class="el" href="engine__partitioning__trigger_8h.html">engine_partitioning_trigger.h</a></li>
+<li>src/lib/solver/strategies/triggers/<a class="el" href="engine__partitioning__trigger_8cpp.html">engine_partitioning_trigger.cpp</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1trigger.html">trigger</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1trigger_1_1solver.html">solver</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html">CVODE</a></li><li class="navelem"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html">BoundaryFluxTrigger</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.js b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.js
new file mode 100644
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   </td>
@@ -105,8 +105,8 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_c
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a5ae9ce66d4bbafd83145f8545a32d33a">abs_failure</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#ae8765656a45319335c2bb90c3fb3d308">check</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a21a3cc61c5fe0db9e859875b36bd1483">abs_failure</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#acd14b8c03540cd7eb9534e09729d7b85">check</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a63010d8ba73689dda0c2228a1462aae2">ConvergenceFailureTrigger</a>(size_t totalFailures, float relativeFailureRate, size_t windowSize)</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a3d8d9eafff17ea6a283afbc7e8b450bb">current_mean</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa2bb19e4a1e24f6fd7f86d0c80ebbec3">describe</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
@@ -122,12 +122,12 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_c
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a92a57cea3b58bd7948c3c3fb4f75619b">name</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa26bf911c73b7f2ec343d473caf13718">numMisses</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa7cc311316539b2d348422ba907dc64e">numTriggers</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a4180dc6761c073acd82583a834ca09fd">rel_failure</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#af9029eaecd0c7ee738e1a845be69b503">rel_failure</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a0bcab0247b3db618b76bd6769cf9a2ea">reset</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aaef2090ed67a7c27967821f75a61e524">step</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#ae47bbdf6edae798f30866c1ac4104cc1">update</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aedd397b71cd5b1ad26a0b21a34cf5631">why</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa3eb221b106c377b692472cb9fc2aa92">step</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a0569c964fb1a2bc1b162aa76c48f19ce">update</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#af2ac29e690bf7ee3e23dc23991e9a401">why</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html
index f79efb83..08d56f0c 100644
--- a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -111,27 +111,27 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_c
 <div class="dynheader">
 Inheritance diagram for gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger:</div>
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-<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph.svg" width="482" height="82"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph.svg" width="219" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <div class="dynheader">
 Collaboration diagram for gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger:</div>
 <div class="dyncontent">
-<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__coll__graph.svg" width="548" height="131"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__coll__graph.svg" width="531" height="118"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
 Public Member Functions</h2></td></tr>
 <tr class="memitem:a63010d8ba73689dda0c2228a1462aae2" id="r_a63010d8ba73689dda0c2228a1462aae2"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a63010d8ba73689dda0c2228a1462aae2">ConvergenceFailureTrigger</a> (size_t totalFailures, float relativeFailureRate, size_t windowSize)</td></tr>
 <tr class="separator:a63010d8ba73689dda0c2228a1462aae2"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ae8765656a45319335c2bb90c3fb3d308" id="r_ae8765656a45319335c2bb90c3fb3d308"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae8765656a45319335c2bb90c3fb3d308">check</a> (const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;ctx) const override</td></tr>
-<tr class="memdesc:ae8765656a45319335c2bb90c3fb3d308"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluate the trigger condition against the provided context.  <br /></td></tr>
-<tr class="separator:ae8765656a45319335c2bb90c3fb3d308"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ae47bbdf6edae798f30866c1ac4104cc1" id="r_ae47bbdf6edae798f30866c1ac4104cc1"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae47bbdf6edae798f30866c1ac4104cc1">update</a> (const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;ctx) override</td></tr>
-<tr class="memdesc:ae47bbdf6edae798f30866c1ac4104cc1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update any internal state with the given context (e.g., counters, windows).  <br /></td></tr>
-<tr class="separator:ae47bbdf6edae798f30866c1ac4104cc1"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:aaef2090ed67a7c27967821f75a61e524" id="r_aaef2090ed67a7c27967821f75a61e524"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aaef2090ed67a7c27967821f75a61e524">step</a> (const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;ctx) override</td></tr>
-<tr class="memdesc:aaef2090ed67a7c27967821f75a61e524"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
-<tr class="separator:aaef2090ed67a7c27967821f75a61e524"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:acd14b8c03540cd7eb9534e09729d7b85" id="r_acd14b8c03540cd7eb9534e09729d7b85"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#acd14b8c03540cd7eb9534e09729d7b85">check</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const override</td></tr>
+<tr class="memdesc:acd14b8c03540cd7eb9534e09729d7b85"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluate the trigger condition against the provided context.  <br /></td></tr>
+<tr class="separator:acd14b8c03540cd7eb9534e09729d7b85"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0569c964fb1a2bc1b162aa76c48f19ce" id="r_a0569c964fb1a2bc1b162aa76c48f19ce"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0569c964fb1a2bc1b162aa76c48f19ce">update</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) override</td></tr>
+<tr class="memdesc:a0569c964fb1a2bc1b162aa76c48f19ce"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update any internal state with the given context (e.g., counters, windows).  <br /></td></tr>
+<tr class="separator:a0569c964fb1a2bc1b162aa76c48f19ce"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa3eb221b106c377b692472cb9fc2aa92" id="r_aa3eb221b106c377b692472cb9fc2aa92"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa3eb221b106c377b692472cb9fc2aa92">step</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) override</td></tr>
+<tr class="memdesc:aa3eb221b106c377b692472cb9fc2aa92"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
+<tr class="separator:aa3eb221b106c377b692472cb9fc2aa92"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a0bcab0247b3db618b76bd6769cf9a2ea" id="r_a0bcab0247b3db618b76bd6769cf9a2ea"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0bcab0247b3db618b76bd6769cf9a2ea">reset</a> () override</td></tr>
 <tr class="memdesc:a0bcab0247b3db618b76bd6769cf9a2ea"><td class="mdescLeft">&#160;</td><td class="mdescRight">Reset internal state and diagnostics counters.  <br /></td></tr>
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@@ -141,16 +141,16 @@ Public Member Functions</h2></td></tr>
 <tr class="memitem:aa2bb19e4a1e24f6fd7f86d0c80ebbec3" id="r_aa2bb19e4a1e24f6fd7f86d0c80ebbec3"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa2bb19e4a1e24f6fd7f86d0c80ebbec3">describe</a> () const override</td></tr>
 <tr class="memdesc:aa2bb19e4a1e24f6fd7f86d0c80ebbec3"><td class="mdescLeft">&#160;</td><td class="mdescRight">Human-readable description of this trigger's logic.  <br /></td></tr>
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-<tr class="separator:aedd397b71cd5b1ad26a0b21a34cf5631"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af2ac29e690bf7ee3e23dc23991e9a401" id="r_af2ac29e690bf7ee3e23dc23991e9a401"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af2ac29e690bf7ee3e23dc23991e9a401">why</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const override</td></tr>
+<tr class="memdesc:af2ac29e690bf7ee3e23dc23991e9a401"><td class="mdescLeft">&#160;</td><td class="mdescRight">Explain why the last evaluation would be true/false in a structured way.  <br /></td></tr>
+<tr class="separator:af2ac29e690bf7ee3e23dc23991e9a401"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="inherit_header pub_methods_classgridfire_1_1trigger_1_1_trigger"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1trigger_1_1_trigger')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a></td></tr>
+<tr class="inherit_header pub_methods_classgridfire_1_1trigger_1_1_trigger"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1trigger_1_1_trigger')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td></tr>
 <tr class="memitem:a2c077ccbaf4de9f7068e50144391edda inherit pub_methods_classgridfire_1_1trigger_1_1_trigger" id="r_a2c077ccbaf4de9f7068e50144391edda"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a> ()=default</td></tr>
 <tr class="memdesc:a2c077ccbaf4de9f7068e50144391edda inherit pub_methods_classgridfire_1_1trigger_1_1_trigger"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor for polymorphic use.  <br /></td></tr>
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@@ -180,10 +180,10 @@ Private Attributes</h2></td></tr>
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-<tr class="memitem:a4180dc6761c073acd82583a834ca09fd" id="r_a4180dc6761c073acd82583a834ca09fd"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4180dc6761c073acd82583a834ca09fd">rel_failure</a> (const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;ctx) const</td></tr>
-<tr class="separator:a4180dc6761c073acd82583a834ca09fd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a21a3cc61c5fe0db9e859875b36bd1483" id="r_a21a3cc61c5fe0db9e859875b36bd1483"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a21a3cc61c5fe0db9e859875b36bd1483">abs_failure</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const</td></tr>
+<tr class="separator:a21a3cc61c5fe0db9e859875b36bd1483"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af9029eaecd0c7ee738e1a845be69b503" id="r_af9029eaecd0c7ee738e1a845be69b503"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af9029eaecd0c7ee738e1a845be69b503">rel_failure</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const</td></tr>
+<tr class="separator:af9029eaecd0c7ee738e1a845be69b503"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
 <a id="a63010d8ba73689dda0c2228a1462aae2" name="a63010d8ba73689dda0c2228a1462aae2"></a>
@@ -221,8 +221,8 @@ Private Attributes</h2></td></tr>
 </div>
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 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a5ae9ce66d4bbafd83145f8545a32d33a" name="a5ae9ce66d4bbafd83145f8545a32d33a"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a5ae9ce66d4bbafd83145f8545a32d33a">&#9670;&#160;</a></span>abs_failure()</h2>
+<a id="a21a3cc61c5fe0db9e859875b36bd1483" name="a21a3cc61c5fe0db9e859875b36bd1483"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a21a3cc61c5fe0db9e859875b36bd1483">&#9670;&#160;</a></span>abs_failure()</h2>
 
 <div class="memitem">
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@@ -233,7 +233,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">bool gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger::abs_failure </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -246,8 +246,8 @@ Private Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="ae8765656a45319335c2bb90c3fb3d308" name="ae8765656a45319335c2bb90c3fb3d308"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ae8765656a45319335c2bb90c3fb3d308">&#9670;&#160;</a></span>check()</h2>
+<a id="acd14b8c03540cd7eb9534e09729d7b85" name="acd14b8c03540cd7eb9534e09729d7b85"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acd14b8c03540cd7eb9534e09729d7b85">&#9670;&#160;</a></span>check()</h2>
 
 <div class="memitem">
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@@ -258,7 +258,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">bool gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger::check </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -278,7 +278,7 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>true if the condition is satisfied; false otherwise. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
 </div>
 </div>
@@ -332,7 +332,7 @@ Private Attributes</h2></td></tr>
 
 <p>Human-readable description of this trigger's logic. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
 </div>
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@@ -361,7 +361,7 @@ Private Attributes</h2></td></tr>
 
 <p>Short, stable name for this trigger (suitable for logs/UI). </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
 </div>
 </div>
@@ -390,7 +390,7 @@ Private Attributes</h2></td></tr>
 
 <p>Total number of times this trigger evaluated to false since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
 </div>
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@@ -419,12 +419,12 @@ Private Attributes</h2></td></tr>
 
 <p>Total number of times this trigger evaluated to true since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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-<a id="a4180dc6761c073acd82583a834ca09fd" name="a4180dc6761c073acd82583a834ca09fd"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a4180dc6761c073acd82583a834ca09fd">&#9670;&#160;</a></span>rel_failure()</h2>
+<a id="af9029eaecd0c7ee738e1a845be69b503" name="af9029eaecd0c7ee738e1a845be69b503"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af9029eaecd0c7ee738e1a845be69b503">&#9670;&#160;</a></span>rel_failure()</h2>
 
 <div class="memitem">
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@@ -435,7 +435,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">bool gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger::rel_failure </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
         </tr>
       </table>
@@ -473,12 +473,12 @@ Private Attributes</h2></td></tr>
 
 <p>Reset internal state and diagnostics counters. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
 </div>
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-<a id="aaef2090ed67a7c27967821f75a61e524" name="aaef2090ed67a7c27967821f75a61e524"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aaef2090ed67a7c27967821f75a61e524">&#9670;&#160;</a></span>step()</h2>
+<a id="aa3eb221b106c377b692472cb9fc2aa92" name="aa3eb221b106c377b692472cb9fc2aa92"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa3eb221b106c377b692472cb9fc2aa92">&#9670;&#160;</a></span>step()</h2>
 
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@@ -489,7 +489,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">void gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger::step </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td></td>
         </tr>
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@@ -508,12 +508,12 @@ Private Attributes</h2></td></tr>
   </dd>
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-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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-<h2 class="memtitle"><span class="permalink"><a href="#ae47bbdf6edae798f30866c1ac4104cc1">&#9670;&#160;</a></span>update()</h2>
+<a id="a0569c964fb1a2bc1b162aa76c48f19ce" name="a0569c964fb1a2bc1b162aa76c48f19ce"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0569c964fb1a2bc1b162aa76c48f19ce">&#9670;&#160;</a></span>update()</h2>
 
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@@ -524,7 +524,7 @@ Private Attributes</h2></td></tr>
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           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -543,12 +543,12 @@ Private Attributes</h2></td></tr>
   </dd>
 </dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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-<a id="aedd397b71cd5b1ad26a0b21a34cf5631" name="aedd397b71cd5b1ad26a0b21a34cf5631"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aedd397b71cd5b1ad26a0b21a34cf5631">&#9670;&#160;</a></span>why()</h2>
+<a id="af2ac29e690bf7ee3e23dc23991e9a401" name="af2ac29e690bf7ee3e23dc23991e9a401"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af2ac29e690bf7ee3e23dc23991e9a401">&#9670;&#160;</a></span>why()</h2>
 
 <div class="memitem">
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@@ -559,7 +559,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname"><a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger::why </td>
           <td>(</td>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
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@@ -579,7 +579,7 @@ Private Attributes</h2></td></tr>
 </dl>
 <dl class="section return"><dt>Returns</dt><dd>A <a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> tree with a boolean value and per-cause details. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+    [ "why", "classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#af2ac29e690bf7ee3e23dc23991e9a401", null ],
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-<text xml:space="preserve" text-anchor="start" x="8" y="-76.62" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::trigger::</text>
-<text xml:space="preserve" text-anchor="start" x="8" y="-65.38" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
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+<text xml:space="preserve" text-anchor="start" x="8" y="-54.75" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
+<text xml:space="preserve" text-anchor="middle" x="78.12" y="-43.5" font-family="Helvetica,sans-Serif" font-size="10.00">::PointSolverTimestepContext &gt;</text>
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+<polygon fill="white" stroke="#666666" points="131.12,-19.25 25.12,-19.25 25.12,0 131.12,0 131.12,-19.25"/>
+<text xml:space="preserve" text-anchor="middle" x="78.12" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">std::deque&lt; size_t &gt;</text>
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@@ -53,11 +52,11 @@
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-<text xml:space="preserve" text-anchor="middle" x="211.75" y="-28.09" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_window</text>
+<text xml:space="preserve" text-anchor="middle" x="199" y="-25.52" font-family="Helvetica,sans-Serif" font-size="10.00" fill="grey"> m_window</text>
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diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph.map b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph.map
index cf0b0271..51b8a270 100644
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+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph.map
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index bcef5546..b27847af 100644
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+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph.md5
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index 793a8d2c..4174a657 100644
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+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph.svg
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+<svg width="164pt" height="128pt"
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@@ -17,16 +17,16 @@
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-<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 57)">
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+<text xml:space="preserve" text-anchor="start" x="12.12" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">solver::CVODE::Convergence</text>
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@@ -34,11 +34,10 @@
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-<text xml:space="preserve" text-anchor="start" x="8" y="-39.5" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::trigger::</text>
-<text xml:space="preserve" text-anchor="start" x="8" y="-28.25" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
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-<text xml:space="preserve" text-anchor="middle" x="84.5" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">Context &gt;</text>
+<polygon fill="white" stroke="#666666" points="156.25,-119.5 0,-119.5 0,-77.75 156.25,-77.75 156.25,-119.5"/>
+<text xml:space="preserve" text-anchor="start" x="8" y="-106" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::trigger::</text>
+<text xml:space="preserve" text-anchor="start" x="8" y="-94.75" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
+<text xml:space="preserve" text-anchor="middle" x="78.12" y="-83.5" font-family="Helvetica,sans-Serif" font-size="10.00">::PointSolverTimestepContext &gt;</text>
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@@ -46,8 +45,8 @@
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diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph_org.svg b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph_org.svg
index c3af82ba..e9baa98f 100644
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+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger__inherit__graph_org.svg
@@ -1,21 +1,21 @@
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@@ -23,11 +23,10 @@
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-<text xml:space="preserve" text-anchor="start" x="8" y="-28.25" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
-<text xml:space="preserve" text-anchor="start" x="8" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">::CVODESolverStrategy::Timestep</text>
-<text xml:space="preserve" text-anchor="middle" x="84.5" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">Context &gt;</text>
+<polygon fill="white" stroke="#666666" points="156.25,-119.5 0,-119.5 0,-77.75 156.25,-77.75 156.25,-119.5"/>
+<text xml:space="preserve" text-anchor="start" x="8" y="-106" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::trigger::</text>
+<text xml:space="preserve" text-anchor="start" x="8" y="-94.75" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
+<text xml:space="preserve" text-anchor="middle" x="78.12" y="-83.5" font-family="Helvetica,sans-Serif" font-size="10.00">::PointSolverTimestepContext &gt;</text>
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@@ -35,8 +34,8 @@
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diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger-members.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger-members.html
index 650e68ee..3ed1710a 100644
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+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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@@ -105,7 +105,7 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_o
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, including all inherited members.</p>
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-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a3855b15459217383647ecdf12bc35775">check</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a57b44a91ada7cf5d86f7de18683d1f7c">check</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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@@ -118,10 +118,10 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_o
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-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a8b882c6ba6e267d7051031140bbb7ad6">step</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a179cb09a91d5c638d7a347137b208767">update</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a3af973e466ba62ebf1e41c608355e327">why</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a7db803459fbf78567eed4e2c3ddd3dfd">step</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a02c83c9e0f6e195cd91cf6f69a37622a">update</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a350a34e34543f35a57785a0c42a4689c">why</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html
index 7cd9bac9..6695b234 100644
--- a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html
@@ -29,7 +29,7 @@
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+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger__inherit__graph.svg" width="219" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
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 Collaboration diagram for gridfire::trigger::solver::CVODE::OffDiagonalTrigger:</div>
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-<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger__coll__graph.svg" width="474" height="82"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger__coll__graph.svg" width="219" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <table class="memberdecls">
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@@ -127,24 +127,24 @@ Public Member Functions</h2></td></tr>
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-<tr class="separator:a8b882c6ba6e267d7051031140bbb7ad6"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a57b44a91ada7cf5d86f7de18683d1f7c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Check if any off-diagonal Jacobian entry exceeds the threshold.  <br /></td></tr>
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+<tr class="memdesc:a02c83c9e0f6e195cd91cf6f69a37622a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Record an update; does not mutate any Jacobian-related state.  <br /></td></tr>
+<tr class="separator:a02c83c9e0f6e195cd91cf6f69a37622a"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a7db803459fbf78567eed4e2c3ddd3dfd"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
+<tr class="separator:a7db803459fbf78567eed4e2c3ddd3dfd"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a3af973e466ba62ebf1e41c608355e327"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structured explanation of the evaluation outcome.  <br /></td></tr>
-<tr class="separator:a3af973e466ba62ebf1e41c608355e327"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a350a34e34543f35a57785a0c42a4689c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structured explanation of the evaluation outcome.  <br /></td></tr>
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@@ -154,7 +154,7 @@ Public Member Functions</h2></td></tr>
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 <tr class="memdesc:a0e1ad148f9f3232992a4b16e440c249a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Number of false evaluations since last reset.  <br /></td></tr>
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+<tr class="inherit_header pub_methods_classgridfire_1_1trigger_1_1_trigger"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1trigger_1_1_trigger')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td></tr>
 <tr class="memitem:a2c077ccbaf4de9f7068e50144391edda inherit pub_methods_classgridfire_1_1trigger_1_1_trigger" id="r_a2c077ccbaf4de9f7068e50144391edda"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a> ()=default</td></tr>
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@@ -233,8 +233,8 @@ Private Attributes</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a3855b15459217383647ecdf12bc35775" name="a3855b15459217383647ecdf12bc35775"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a3855b15459217383647ecdf12bc35775">&#9670;&#160;</a></span>check()</h2>
+<a id="a57b44a91ada7cf5d86f7de18683d1f7c" name="a57b44a91ada7cf5d86f7de18683d1f7c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a57b44a91ada7cf5d86f7de18683d1f7c">&#9670;&#160;</a></span>check()</h2>
 
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@@ -245,7 +245,7 @@ Private Attributes</h2></td></tr>
         <tr>
           <td class="memname">bool gridfire::trigger::solver::CVODE::OffDiagonalTrigger::check </td>
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-          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
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@@ -266,7 +266,7 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>true if max_{i!=j} |J(i,j)| &gt; threshold; false otherwise.</dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>increments hit/miss counters and may emit trace logs. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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 <p>Textual description including configured threshold. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -324,7 +324,7 @@ Private Attributes</h2></td></tr>
 
 <p>Stable human-readable name. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -353,7 +353,7 @@ Private Attributes</h2></td></tr>
 
 <p>Number of false evaluations since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -382,7 +382,7 @@ Private Attributes</h2></td></tr>
 
 <p>Number of true evaluations since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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 <p>Reset counters to zero. </p>
 
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+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+<a id="a350a34e34543f35a57785a0c42a4689c" name="a350a34e34543f35a57785a0c42a4689c"></a>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a75e4c5c1d58ed7169bce136c6370f34b">check</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a2b1b4a9ef137e76d39e7a7dcb6cf725d">m_hits</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ab6215873390f6bedab5c9f83b990b5e0">m_interval</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
@@ -120,10 +120,10 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_s
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   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#af4034fa431e6c88fd05c50cce31b2fa0">reset</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#aafc7f40bde2c78f4d100b6f9da771831">step</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a468bf58f66417493501c59d7a8aabc98">update</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a9dfab0b765d3a4c362cecd860d59f58a">why</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ab7acb0bc053cc1d67c6a0d51f98d65d9">step</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ae6c1d1cc68b5ac422e0d606e44c45783">update</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ad27967c054709ca5ac49998e695731a4">why</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html
index 7200161e..8a72d3b8 100644
--- a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html
@@ -29,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger__inherit__graph.svg" width="222" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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 Collaboration diagram for gridfire::trigger::solver::CVODE::SimulationTimeTrigger:</div>
 <div class="dyncontent">
-<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger__coll__graph.svg" width="495" height="82"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger__coll__graph.svg" width="222" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
@@ -127,24 +127,24 @@ Public Member Functions</h2></td></tr>
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-<tr class="memdesc:a468bf58f66417493501c59d7a8aabc98"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update internal state; if check(ctx) is true, advance last_trigger_time.  <br /></td></tr>
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-<tr class="memdesc:aafc7f40bde2c78f4d100b6f9da771831"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
-<tr class="separator:aafc7f40bde2c78f4d100b6f9da771831"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a75e4c5c1d58ed7169bce136c6370f34b" id="r_a75e4c5c1d58ed7169bce136c6370f34b"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a75e4c5c1d58ed7169bce136c6370f34b">check</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const override</td></tr>
+<tr class="memdesc:a75e4c5c1d58ed7169bce136c6370f34b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluate whether enough simulated time has elapsed since the last trigger.  <br /></td></tr>
+<tr class="separator:a75e4c5c1d58ed7169bce136c6370f34b"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:ae6c1d1cc68b5ac422e0d606e44c45783"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update internal state; if check(ctx) is true, advance last_trigger_time.  <br /></td></tr>
+<tr class="separator:ae6c1d1cc68b5ac422e0d606e44c45783"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:ab7acb0bc053cc1d67c6a0d51f98d65d9"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
+<tr class="separator:ab7acb0bc053cc1d67c6a0d51f98d65d9"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a9dfab0b765d3a4c362cecd860d59f58a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structured explanation of the evaluation outcome.  <br /></td></tr>
-<tr class="separator:a9dfab0b765d3a4c362cecd860d59f58a"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:ad27967c054709ca5ac49998e695731a4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structured explanation of the evaluation outcome.  <br /></td></tr>
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+<tr class="inherit_header pub_methods_classgridfire_1_1trigger_1_1_trigger"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1trigger_1_1_trigger')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td></tr>
 <tr class="memitem:a2c077ccbaf4de9f7068e50144391edda inherit pub_methods_classgridfire_1_1trigger_1_1_trigger" id="r_a2c077ccbaf4de9f7068e50144391edda"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a> ()=default</td></tr>
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@@ -188,7 +188,7 @@ Private Attributes</h2></td></tr>
 <ul>
 <li>check(ctx) returns true when (ctx.t - last_trigger_time) &gt;= interval.</li>
 <li>update(ctx) will, if check(ctx) is true, record ctx.t as the new last_trigger_time and store a small delta relative to the configured interval (for diagnostics/logging).</li>
-<li>Counters (hits/misses/updates/resets) are maintained for diagnostics; they are mutable to allow updates from const <a class="el" href="#a50df7fefee167390522aa258fa6ee960" title="Evaluate whether enough simulated time has elapsed since the last trigger.">check()</a>.</li>
+<li>Counters (hits/misses/updates/resets) are maintained for diagnostics; they are mutable to allow updates from const <a class="el" href="#a75e4c5c1d58ed7169bce136c6370f34b" title="Evaluate whether enough simulated time has elapsed since the last trigger.">check()</a>.</li>
 </ul>
 <dl class="section user"><dt>Constraints/Errors:</dt><dd><ul>
 <li>Constructing with a non-positive interval throws std::invalid_argument.</li>
@@ -237,8 +237,8 @@ Private Attributes</h2></td></tr>
 </div>
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 <h2 class="groupheader">Member Function Documentation</h2>
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-<h2 class="memtitle"><span class="permalink"><a href="#a50df7fefee167390522aa258fa6ee960">&#9670;&#160;</a></span>check()</h2>
+<a id="a75e4c5c1d58ed7169bce136c6370f34b" name="a75e4c5c1d58ed7169bce136c6370f34b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a75e4c5c1d58ed7169bce136c6370f34b">&#9670;&#160;</a></span>check()</h2>
 
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@@ -249,7 +249,7 @@ Private Attributes</h2></td></tr>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
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@@ -270,7 +270,7 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>true if (ctx.t - last_trigger_time) &gt;= interval; false otherwise.</dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>increments hit/miss counters and may emit trace logs. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -299,7 +299,7 @@ Private Attributes</h2></td></tr>
 
 <p>Textual description including configured interval. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -328,7 +328,7 @@ Private Attributes</h2></td></tr>
 
 <p>Stable human-readable name. </p>
 
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+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
 </div>
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@@ -357,7 +357,7 @@ Private Attributes</h2></td></tr>
 
 <p>Number of false evaluations since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -386,7 +386,7 @@ Private Attributes</h2></td></tr>
 
 <p>Number of true evaluations since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -415,12 +415,12 @@ Private Attributes</h2></td></tr>
 
 <p>Reset counters and last trigger bookkeeping (time and delta) to zero. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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@@ -450,12 +450,12 @@ Private Attributes</h2></td></tr>
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+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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@@ -484,14 +484,14 @@ Private Attributes</h2></td></tr>
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+<dl class="section note"><dt>Note</dt><dd><a class="el" href="#ae6c1d1cc68b5ac422e0d606e44c45783" title="Update internal state; if check(ctx) is true, advance last_trigger_time.">update()</a> calls check(ctx) and, on success, records the overshoot delta (ctx.t - last_trigger_time) - interval for diagnostics. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+<a id="ad27967c054709ca5ac49998e695731a4" name="ad27967c054709ca5ac49998e695731a4"></a>
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@@ -502,7 +502,7 @@ Private Attributes</h2></td></tr>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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@@ -522,7 +522,7 @@ Private Attributes</h2></td></tr>
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-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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-<text xml:space="preserve" text-anchor="start" x="8" y="-28.25" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
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+<text xml:space="preserve" text-anchor="start" x="8.75" y="-94.75" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
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diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger-members.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger-members.html
index 9ddbf0f9..aa813989 100644
--- a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger-members.html
+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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@@ -105,7 +105,7 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_t
 
 <p>This is the complete list of members for <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a04598611b0807cad395bdd2fbc41a6c2">check</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#aa91e16acc6a71d319169cbf9e7cd97ce">check</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a8ba5a942bb61347851030d1eb6bbaa74">describe</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#aff23db33140aa6a5a2ad36eda77b833d">m_hits</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#abe902b2a42a6451f64497e075b0e0b25">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
@@ -120,12 +120,12 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_t
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   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#ad2a7c2567b100f97a024f65818ecefed">numTriggers</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a0fe6af73b11b820561bd4e5552890d4e">reset</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
-  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a9723e389aeba05fdb3d4fd1dcc1ba07d">step</a>(const gridfire::solver::CVODESolverStrategy::TimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a63dc6196975d115be5f36ad87c19cdb5">step</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
   <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a171e6dee7f7d8275b3e8875eaeb0850d">TimestepCollapseTrigger</a>(double threshold, bool relative)</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
   <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#ae47a4f822f92774f6dc780ae74f12066">TimestepCollapseTrigger</a>(double threshold, bool relative, size_t windowSize)</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
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-  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a6042258a7bf4d8bd53fe9ed176a52143">update</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a47335ede9fe59cc6e76e670bc4e7218d">why</a>(const gridfire::solver::PointSolverTimestepContext &amp;ctx) const override</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">~Trigger</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 </table></div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
diff --git a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html
index 9145d7ad..a38169f7 100644
--- a/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html
+++ b/docs/html/classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html
@@ -29,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -114,12 +114,12 @@ $(function(){initNavTree('classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_t
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 Inheritance diagram for gridfire::trigger::solver::CVODE::TimestepCollapseTrigger:</div>
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-<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger__inherit__graph.svg" width="510" height="82"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger__inherit__graph.svg" width="236" height="171"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <div class="dynheader">
 Collaboration diagram for gridfire::trigger::solver::CVODE::TimestepCollapseTrigger:</div>
 <div class="dyncontent">
-<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger__coll__graph.svg" width="632" height="131"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger__coll__graph.svg" width="616" height="118"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
 <center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
@@ -130,24 +130,24 @@ Public Member Functions</h2></td></tr>
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 <tr class="memdesc:ae47a4f822f92774f6dc780ae74f12066"><td class="mdescLeft">&#160;</td><td class="mdescRight">Construct with threshold, mode, and window size.  <br /></td></tr>
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-<tr class="memdesc:a04598611b0807cad395bdd2fbc41a6c2"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluate whether the current dt deviates sufficiently from recent average.  <br /></td></tr>
-<tr class="separator:a04598611b0807cad395bdd2fbc41a6c2"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:af6bff6a484e8729445c26620b489665d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update sliding window with the most recent dt and increment update counter.  <br /></td></tr>
-<tr class="separator:af6bff6a484e8729445c26620b489665d"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a9723e389aeba05fdb3d4fd1dcc1ba07d"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
-<tr class="separator:a9723e389aeba05fdb3d4fd1dcc1ba07d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa91e16acc6a71d319169cbf9e7cd97ce" id="r_aa91e16acc6a71d319169cbf9e7cd97ce"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa91e16acc6a71d319169cbf9e7cd97ce">check</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) const override</td></tr>
+<tr class="memdesc:aa91e16acc6a71d319169cbf9e7cd97ce"><td class="mdescLeft">&#160;</td><td class="mdescRight">Evaluate whether the current dt deviates sufficiently from recent average.  <br /></td></tr>
+<tr class="separator:aa91e16acc6a71d319169cbf9e7cd97ce"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6042258a7bf4d8bd53fe9ed176a52143" id="r_a6042258a7bf4d8bd53fe9ed176a52143"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6042258a7bf4d8bd53fe9ed176a52143">update</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) override</td></tr>
+<tr class="memdesc:a6042258a7bf4d8bd53fe9ed176a52143"><td class="mdescLeft">&#160;</td><td class="mdescRight">Update sliding window with the most recent dt and increment update counter.  <br /></td></tr>
+<tr class="separator:a6042258a7bf4d8bd53fe9ed176a52143"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a63dc6196975d115be5f36ad87c19cdb5" id="r_a63dc6196975d115be5f36ad87c19cdb5"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a63dc6196975d115be5f36ad87c19cdb5">step</a> (const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;ctx) override</td></tr>
+<tr class="memdesc:a63dc6196975d115be5f36ad87c19cdb5"><td class="mdescLeft">&#160;</td><td class="mdescRight">similar to update but intended to be run on every step not just those where the trigger triggered  <br /></td></tr>
+<tr class="separator:a63dc6196975d115be5f36ad87c19cdb5"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a47335ede9fe59cc6e76e670bc4e7218d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structured explanation of the evaluation outcome.  <br /></td></tr>
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@@ -157,7 +157,7 @@ Public Member Functions</h2></td></tr>
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+<tr class="inherit_header pub_methods_classgridfire_1_1trigger_1_1_trigger"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1trigger_1_1_trigger')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a></td></tr>
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@@ -211,7 +211,7 @@ Private Attributes</h2></td></tr>
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+<li>Counter fields are mutable to allow updates during const <a class="el" href="#aa91e16acc6a71d319169cbf9e7cd97ce" title="Evaluate whether the current dt deviates sufficiently from recent average.">check()</a>.</li>
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@@ -311,8 +311,8 @@ Private Attributes</h2></td></tr>
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-<h2 class="memtitle"><span class="permalink"><a href="#a04598611b0807cad395bdd2fbc41a6c2">&#9670;&#160;</a></span>check()</h2>
+<a id="aa91e16acc6a71d319169cbf9e7cd97ce" name="aa91e16acc6a71d319169cbf9e7cd97ce"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa91e16acc6a71d319169cbf9e7cd97ce">&#9670;&#160;</a></span>check()</h2>
 
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           <td>(</td>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
           <td> const</td>
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@@ -344,7 +344,7 @@ Private Attributes</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>true if deviation exceeds the configured threshold; false otherwise.</dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>increments hit/miss counters and may emit trace logs. </dd></dl>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -373,7 +373,7 @@ Private Attributes</h2></td></tr>
 
 <p>Textual description including threshold, mode, and window size. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -402,7 +402,7 @@ Private Attributes</h2></td></tr>
 
 <p>Stable human-readable name. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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@@ -431,7 +431,7 @@ Private Attributes</h2></td></tr>
 
 <p>Number of false evaluations since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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 <p>Number of true evaluations since last reset. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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 <p>Reset counters and clear the dt window. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+<a id="a63dc6196975d115be5f36ad87c19cdb5" name="a63dc6196975d115be5f36ad87c19cdb5"></a>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+<a id="a6042258a7bf4d8bd53fe9ed176a52143" name="a6042258a7bf4d8bd53fe9ed176a52143"></a>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
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@@ -588,7 +588,7 @@ Private Attributes</h2></td></tr>
 
 <p>Structured explanation of the evaluation outcome. </p>
 
-<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::CVODESolverStrategy::TimestepContext &gt;</a>.</p>
+<p>Implements <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; gridfire::solver::PointSolverTimestepContext &gt;</a>.</p>
 
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+<text xml:space="preserve" text-anchor="start" x="8" y="-54.75" font-family="Helvetica,sans-Serif" font-size="10.00">Trigger&lt; gridfire::solver</text>
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+</div><!-- fragment --></div><!-- contents -->
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+<!-- start footer part -->
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::IsScratchPad Concept Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Concept that constrains types to valid scratchpad implementations.  
+<a href="#details">More...</a></p>
+
+<p><code>#include &lt;blob.h&gt;</code></p>
+<h2 class="groupheader">Concept definition</h2>
+<div class="fragment"><div class="line"><span class="keyword">template</span>&lt;<span class="keyword">typename</span> T&gt;</div>
+<div class="line"><span class="keyword">concept </span><a class="code hl_concept" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html">gridfire::engine::scratch::IsScratchPad</a> =  std::is_base_of_v&lt;AbstractScratchPad, T&gt;</div>
+<div class="line">                       &amp;&amp; <span class="keyword">requires</span> { { T::ID } -&gt; std::convertible_to&lt;ScratchPadType&gt;; }</div>
+<div class="ttc" id="aconceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad_html"><div class="ttname"><a href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html">gridfire::engine::scratch::IsScratchPad</a></div><div class="ttdoc">Concept that constrains types to valid scratchpad implementations.</div><div class="ttdef"><b>Definition</b> blob.h:90</div></div>
+</div><!-- fragment --><a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Concept that constrains types to valid scratchpad implementations. </p>
+<p>A type satisfies IsScratchPad if:</p><ul>
+<li>It derives from AbstractScratchPad</li>
+<li>It has a static ID member convertible to ScratchPadType</li>
+</ul>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">T</td><td>The type to check against the concept.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="comment">// This will compile only if MyScratchPad satisfies IsScratchPad</span></div>
+<div class="line"><span class="keyword">template</span> &lt;IsScratchPad T&gt;</div>
+<div class="line"><span class="keywordtype">void</span> process_scratchpad(T&amp; <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>) {</div>
+<div class="line">    <span class="comment">// Use scratch...</span></div>
+<div class="line">}</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+</div><!-- fragment --> </dd></dl>
+</div></div><!-- contents -->
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+</div>
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+
+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::IsEngine Concept Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;strategy_abstract.h&gt;</code></p>
+<h2 class="groupheader">Concept definition</h2>
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+<div class="line"><span class="keyword">concept </span><a class="code hl_concept" href="conceptgridfire_1_1solver_1_1_is_engine.html">gridfire::solver::IsEngine</a> =  std::is_base_of_v&lt;engine::Engine, EngineT&gt;</div>
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1415.96,-163.65 1405.39,-164.39 1414.12,-170.4 1415.96,-163.65"/>
+<path fill="none" stroke="#63b8ff" d="M1274.96,-199.03C1244.18,-189.58 1204,-177.24 1171.35,-167.21"/>
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@@ -1116,8 +1145,8 @@ var sectionId = 'dynsection-0';
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1341.01,-90.76 1330.42,-91.17 1338.96,-97.46 1341.01,-90.76"/>
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@@ -1134,8 +1163,8 @@ var sectionId = 'dynsection-0';
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+<polygon fill="#e0e0e0" stroke="#999999" points="1945.25,-91.38 1910.5,-91.38 1910.5,-72.12 1945.25,-72.12 1945.25,-91.38"/>
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@@ -1143,8 +1172,8 @@ var sectionId = 'dynsection-0';
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@@ -1152,8 +1181,8 @@ var sectionId = 'dynsection-0';
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@@ -1161,8 +1190,8 @@ var sectionId = 'dynsection-0';
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1562.62,-102.21 1567.18,-92.65 1557.65,-97.28 1562.62,-102.21"/>
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+<g id="edge57_Node000034_Node000006" class="edge">
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-<g id="a_edge58_Node000034_Node000006"><a xlink:title=" ">
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@@ -1069,8 +1098,8 @@
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@@ -1096,8 +1125,8 @@
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-<text xml:space="preserve" text-anchor="middle" x="1577" y="-77.88" font-family="Helvetica,sans-Serif" font-size="10.00">sstream</text>
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1562.62,-102.21 1567.18,-92.65 1557.65,-97.28 1562.62,-102.21"/>
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+<g id="edge57_Node000034_Node000006" class="edge">
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+<script type="text/javascript">
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diff --git a/docs/html/doxygen.css b/docs/html/doxygen.css
index 8cff99eb..90fba19b 100644
--- a/docs/html/doxygen.css
+++ b/docs/html/doxygen.css
@@ -1,4 +1,4 @@
-/* The standard CSS for doxygen 1.9.8*/
+/* The standard CSS for doxygen 1.13.2*/
 
 body {
     background-color: white;
@@ -15,8 +15,6 @@ body, table, div, p, dl {
 /* @group Heading Levels */
 
 .title {
-	font-weight: 400;
-	font-size: 14px;
 	font-family: Roboto,sans-serif;
 	line-height: 28px;
 	font-size: 150%;
@@ -214,7 +212,13 @@ a {
 }
 
 a:hover {
-	text-decoration: underline;
+	text-decoration: none;
+	background:   linear-gradient(to bottom, transparent 0,transparent calc(100% - 1px), currentColor 100%);
+}
+
+a:hover > span.arrow {
+        text-decoration: none;
+        background : #F9FAFC;
 }
 
 a.el {
@@ -265,7 +269,24 @@ dl.el {
 	margin-left: -1cm;
 }
 
+ul.check {
+  list-style:none;
+  text-indent: -16px;
+  padding-left: 38px;
+}
+li.unchecked:before {
+  content: "\2610\A0";
+}
+li.checked:before {
+  content: "\2611\A0";
+}
+
+ol {
+  text-indent: 0px;
+}
+
 ul {
+  text-indent: 0px;
   overflow: visible;
 }
 
@@ -290,30 +311,62 @@ ul.multicol {
 .fragment {
   text-align: left;
   direction: ltr;
-  overflow-x: auto; /*Fixed: fragment lines overlap floating elements*/
+  overflow-x: auto;
   overflow-y: hidden;
+  position: relative;
+  min-height: 12px;
+  margin: 10px 0px;
+  padding: 10px 10px;
+  border: 1px solid #C4CFE5;
+  border-radius: 4px;
+  background-color: #FBFCFD;
+  color: black;
 }
 
 pre.fragment {
-        border: 1px solid #C4CFE5;
-        background-color: #FBFCFD;
-	color: black;
-        padding: 4px 6px;
-        margin: 4px 8px 4px 2px;
-        overflow: auto;
-        word-wrap: break-word;
-        font-size:  9pt;
-        line-height: 125%;
-        font-family: 'JetBrains Mono',Consolas,Monaco,'Andale Mono','Ubuntu Mono',monospace,fixed;
-        font-size: 105%;
+  word-wrap: break-word;
+  font-size:  10pt;
+  line-height: 125%;
+  font-family: 'JetBrains Mono',Consolas,Monaco,'Andale Mono','Ubuntu Mono',monospace,fixed;
 }
 
-div.fragment {
-	padding: 0 0 1px 0; /*Fixed: last line underline overlap border*/
-	margin: 4px 8px 4px 2px;
-	color: black;
-	background-color: #FBFCFD;
-	border: 1px solid #C4CFE5;
+.clipboard {
+        width: 24px;
+        height: 24px;
+        right: 5px;
+        top: 5px;
+        opacity: 0;
+        position: absolute;
+        display: inline;
+        overflow: hidden;
+        justify-content: center;
+        align-items: center;
+        cursor: pointer;
+}
+
+.clipboard.success {
+        border: 1px solid black;
+        border-radius: 4px;
+}
+
+.fragment:hover .clipboard, .clipboard.success {
+        opacity: .4;
+}
+
+.clipboard:hover, .clipboard.success {
+        opacity: 1 !important;
+}
+
+.clipboard:active:not([class~=success]) svg {
+        transform: scale(.91);
+}
+
+.clipboard.success svg {
+        fill: #2EC82E;
+}
+
+.clipboard.success {
+        border-color: #2EC82E;
 }
 
 div.line {
@@ -436,10 +489,6 @@ img.light-mode-visible {
 	display: none;
 }
 
-img.formulaDsp {
-	
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 img.formulaInl, img.inline {
 	vertical-align: middle;
 }
@@ -739,17 +788,25 @@ dl.reflist dd {
 
 .paramtype {
 	white-space: nowrap;
+	padding: 0px;
+	padding-bottom: 1px;
 }
 
 .paramname {
-	color: #602020;
 	white-space: nowrap;
+        padding: 0px;
+        padding-bottom: 1px;
+        margin-left: 2px;
 }
+
 .paramname em {
+	color: #602020;
 	font-style: normal;
+	margin-right: 1px;
 }
-.paramname code {
-        line-height: 14px;
+
+.paramname .paramdefval {
+	font-family: 'JetBrains Mono',Consolas,Monaco,'Andale Mono','Ubuntu Mono',monospace,fixed;
 }
 
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@@ -999,7 +1056,7 @@ table.fieldtable {
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 }
 
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         border-bottom: 1px solid #A8B8D9;
@@ -1010,6 +1067,12 @@ table.fieldtable {
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 }
 
+.fieldtable td.fieldinit {
+        padding-top: 3px;
+        text-align: right;
+}
+
+
 .fieldtable td.fielddoc {
         border-bottom: 1px solid #A8B8D9;
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         padding: 0 0 0 0;
 }
 
-/* dl.note, dl.warning, dl.attention, dl.pre, dl.post, dl.invariant, dl.deprecated, dl.todo, dl.test, dl.bug, dl.examples */
+/*
+
 dl.section {
 	margin-left: 0px;
 	padding-left: 0px;
@@ -1185,7 +1248,7 @@ dl.note {
   border-color: #D0C000;
 }
 
-dl.warning, dl.attention {
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   padding-left: 3px;
   border-left: 4px solid;
@@ -1227,8 +1290,103 @@ dl.bug {
   border-color: #C08050;
 }
 
+*/
+
+dl.bug dt a, dl.deprecated dt a, dl.todo dt a, dl.test a {
+    font-weight: bold !important;
+}
+
+dl.warning, dl.attention, dl.important, dl.note, dl.deprecated, dl.bug,
+dl.invariant, dl.pre, dl.post, dl.todo, dl.test, dl.remark {
+    padding: 10px;
+    margin: 10px 0px;
+    overflow: hidden;
+    margin-left: 0;
+    border-radius: 4px;
+}
+
 dl.section dd {
-	margin-bottom: 6px;
+    margin-bottom: 2px;
+}
+
+dl.warning, dl.attention, dl.important {
+    background: #f8d1cc;
+    border-left: 8px solid #b61825;
+    color: #75070f;
+}
+
+dl.warning dt, dl.attention dt, dl.important dt {
+    color: #b61825;
+}
+
+dl.note, dl.remark {
+    background: #faf3d8;
+    border-left: 8px solid #f3a600;
+    color: #5f4204;
+}
+
+dl.note dt, dl.remark dt {
+    color: #f3a600;
+}
+
+dl.todo {
+    background: #e4f3ff;
+    border-left: 8px solid #1879C4;
+    color: #274a5c;
+}
+
+dl.todo dt {
+    color: #1879C4;
+}
+
+dl.test {
+    background: #e8e8ff;
+    border-left: 8px solid #3939C4;
+    color: #1a1a5c;
+}
+
+dl.test dt {
+    color: #3939C4;
+}
+
+dl.bug dt a {
+    color: #5b2bdd !important;
+}
+
+dl.bug {
+    background: #e4dafd;
+    border-left: 8px solid #5b2bdd;
+    color: #2a0d72;
+}
+
+dl.bug dt a {
+    color: #5b2bdd !important;
+}
+
+dl.deprecated {
+    background: #ecf0f3;
+    border-left: 8px solid #5b6269;
+    color: #43454a;
+}
+
+dl.deprecated dt a {
+    color: #5b6269 !important;
+}
+
+dl.note dd, dl.warning dd, dl.pre dd, dl.post dd,
+dl.remark dd, dl.attention dd, dl.important dd, dl.invariant dd,
+dl.bug dd, dl.deprecated dd, dl.todo dd, dl.test dd {
+    margin-inline-start: 0px;
+}
+
+dl.invariant, dl.pre, dl.post {
+    background: #d8f1e3;
+    border-left: 8px solid #44b86f;
+    color: #265532;
+}
+
+dl.invariant dt, dl.pre dt, dl.post dt {
+    color: #44b86f;
 }
 
 
@@ -1243,12 +1401,12 @@ dl.section dd {
 	vertical-align: bottom;
 	border-collapse: separate;
 }
- 
+
 #projectlogo img
-{ 
+{
 	border: 0px none;
 }
- 
+
 #projectalign
 {
         vertical-align: middle;
@@ -1263,6 +1421,11 @@ dl.section dd {
 	padding: 2px 0px;
 }
 
+#side-nav #projectname
+{
+	font-size: 130%;
+}
+
 #projectbrief
 {
 	font-size: 90%;
@@ -1369,20 +1532,17 @@ div.toc ul {
         padding: 0px;
 }
 
+div.toc li[class^='level'] {
+        margin-left: 15px;
+}
+
 div.toc li.level1 {
         margin-left: 0px;
 }
 
-div.toc li.level2 {
-        margin-left: 15px;
-}
-
-div.toc li.level3 {
-        margin-left: 15px;
-}
-
-div.toc li.level4 {
-        margin-left: 15px;
+div.toc li.empty {
+        background-image: none;
+        margin-top: 0px;
 }
 
 span.emoji {
@@ -1653,10 +1813,14 @@ th.markdownTableHeadCenter, td.markdownTableBodyCenter {
 	text-align: center
 }
 
-tt, code, kbd, samp
+tt, code, kbd
 {
   display: inline-block;
 }
+tt, code, kbd
+{
+  vertical-align: top;
+}
 /* @end */
 
 u {
diff --git a/docs/html/doxygen_crawl.html b/docs/html/doxygen_crawl.html
index 542b8a19..298de811 100644
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+<a href="_grid_solver_8h.html"/>
+<a href="_point_solver_8cpp.html"/>
+<a href="_point_solver_8h.html"/>
 <a href="annotated.html"/>
 <a href="bindings_8cpp.html"/>
 <a href="bindings_8cpp.html#a9c016d071d1caa07f4a005c87acb0c33"/>
+<a href="blob_8h.html"/>
 <a href="building_8h.html"/>
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+<text xml:space="preserve" text-anchor="middle" x="1833.75" y="-72.25" font-family="Helvetica,sans-Serif" font-size="10.00">/error_gridfire.h</text>
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+</g>
+<!-- Node36&#45;&gt;Node30 -->
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+<title>Node36&#45;&gt;Node30</title>
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+</a>
+</g>
+</g>
+<!-- Node36&#45;&gt;Node37 -->
+<g id="edge51_Node000036_Node000037" class="edge">
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diff --git a/docs/html/dynsections.js b/docs/html/dynsections.js
index ee3f142f..3cc426a6 100644
--- a/docs/html/dynsections.js
+++ b/docs/html/dynsections.js
@@ -22,171 +22,177 @@
 
  @licend  The above is the entire license notice for the JavaScript code in this file
  */
-function toggleVisibility(linkObj)
-{
- var base = $(linkObj).attr('id');
- var summary = $('#'+base+'-summary');
- var content = $('#'+base+'-content');
- var trigger = $('#'+base+'-trigger');
- var src=$(trigger).attr('src');
- if (content.is(':visible')===true) {
-   content.hide();
-   summary.show();
-   $(linkObj).addClass('closed').removeClass('opened');
-   $(trigger).attr('src',src.substring(0,src.length-8)+'closed.png');
- } else {
-   content.show();
-   summary.hide();
-   $(linkObj).removeClass('closed').addClass('opened');
-   $(trigger).attr('src',src.substring(0,src.length-10)+'open.png');
- }
- return false;
+
+function toggleVisibility(linkObj) {
+  return dynsection.toggleVisibility(linkObj);
 }
 
-function updateStripes()
-{
-  $('table.directory tr').
-       removeClass('even').filter(':visible:even').addClass('even');
-  $('table.directory tr').
-       removeClass('odd').filter(':visible:odd').addClass('odd');
-}
+let dynsection = {
 
-function toggleLevel(level)
-{
-  $('table.directory tr').each(function() {
-    var l = this.id.split('_').length-1;
-    var i = $('#img'+this.id.substring(3));
-    var a = $('#arr'+this.id.substring(3));
-    if (l<level+1) {
-      i.removeClass('iconfopen iconfclosed').addClass('iconfopen');
-      a.html('&#9660;');
-      $(this).show();
-    } else if (l==level+1) {
-      i.removeClass('iconfclosed iconfopen').addClass('iconfclosed');
-      a.html('&#9658;');
-      $(this).show();
+  // helper function
+  updateStripes : function() {
+    $('table.directory tr').
+      removeClass('even').filter(':visible:even').addClass('even');
+    $('table.directory tr').
+      removeClass('odd').filter(':visible:odd').addClass('odd');
+  },
+
+  toggleVisibility : function(linkObj) {
+    const base = $(linkObj).attr('id');
+    const summary = $('#'+base+'-summary');
+    const content = $('#'+base+'-content');
+    const trigger = $('#'+base+'-trigger');
+    const src=$(trigger).attr('src');
+    if (content.is(':visible')===true) {
+      content.hide();
+      summary.show();
+      $(linkObj).addClass('closed').removeClass('opened');
+      $(trigger).attr('src',src.substring(0,src.length-8)+'closed.png');
     } else {
-      $(this).hide();
+      content.show();
+      summary.hide();
+      $(linkObj).removeClass('closed').addClass('opened');
+      $(trigger).attr('src',src.substring(0,src.length-10)+'open.png');
     }
-  });
-  updateStripes();
-}
+    return false;
+  },
 
-function toggleFolder(id)
-{
-  // the clicked row
-  var currentRow = $('#row_'+id);
-
-  // all rows after the clicked row
-  var rows = currentRow.nextAll("tr");
-
-  var re = new RegExp('^row_'+id+'\\d+_$', "i"); //only one sub
-
-  // only match elements AFTER this one (can't hide elements before)
-  var childRows = rows.filter(function() { return this.id.match(re); });
-
-  // first row is visible we are HIDING
-  if (childRows.filter(':first').is(':visible')===true) {
-    // replace down arrow by right arrow for current row
-    var currentRowSpans = currentRow.find("span");
-    currentRowSpans.filter(".iconfopen").removeClass("iconfopen").addClass("iconfclosed");
-    currentRowSpans.filter(".arrow").html('&#9658;');
-    rows.filter("[id^=row_"+id+"]").hide(); // hide all children
-  } else { // we are SHOWING
-    // replace right arrow by down arrow for current row
-    var currentRowSpans = currentRow.find("span");
-    currentRowSpans.filter(".iconfclosed").removeClass("iconfclosed").addClass("iconfopen");
-    currentRowSpans.filter(".arrow").html('&#9660;');
-    // replace down arrows by right arrows for child rows
-    var childRowsSpans = childRows.find("span");
-    childRowsSpans.filter(".iconfopen").removeClass("iconfopen").addClass("iconfclosed");
-    childRowsSpans.filter(".arrow").html('&#9658;');
-    childRows.show(); //show all children
-  }
-  updateStripes();
-}
-
-
-function toggleInherit(id)
-{
-  var rows = $('tr.inherit.'+id);
-  var img = $('tr.inherit_header.'+id+' img');
-  var src = $(img).attr('src');
-  if (rows.filter(':first').is(':visible')===true) {
-    rows.css('display','none');
-    $(img).attr('src',src.substring(0,src.length-8)+'closed.png');
-  } else {
-    rows.css('display','table-row'); // using show() causes jump in firefox
-    $(img).attr('src',src.substring(0,src.length-10)+'open.png');
-  }
-}
-
-var opened=true;
-// in case HTML_COLORSTYLE is LIGHT or DARK the vars will be replaced, so we write them out explicitly and use double quotes
-var plusImg  = [ "url('plus.svg')",  "url('../../plus.svg')" ];
-var minusImg = [ "url('minus.svg')", "url('../../minus.svg')" ];
-
-// toggle all folding blocks
-function codefold_toggle_all(relPath) {
- if (opened) {
-   $('#fold_all').css('background-image',plusImg[relPath]);
-   $('div[id^=foldopen]').hide();
-   $('div[id^=foldclosed]').show();
- } else {
-   $('#fold_all').css('background-image',minusImg[relPath]);
-   $('div[id^=foldopen]').show();
-   $('div[id^=foldclosed]').hide();
- }
- opened=!opened;
-}
-
-// toggle single folding block
-function codefold_toggle(id) {
-  $('#foldopen'+id).toggle();
-  $('#foldclosed'+id).toggle();
-}
-function init_codefold(relPath) {
-  $('span[class=lineno]').css(
-    {'padding-right':'4px',
-     'margin-right':'2px',
-     'display':'inline-block',
-     'width':'54px',
-     'background':'linear-gradient(#808080,#808080) no-repeat 46px/2px 100%'
+  toggleLevel : function(level) {
+    $('table.directory tr').each(function() {
+      const l = this.id.split('_').length-1;
+      const i = $('#img'+this.id.substring(3));
+      const a = $('#arr'+this.id.substring(3));
+      if (l<level+1) {
+        i.removeClass('iconfopen iconfclosed').addClass('iconfopen');
+        a.html('&#9660;');
+        $(this).show();
+      } else if (l==level+1) {
+        i.removeClass('iconfclosed iconfopen').addClass('iconfclosed');
+        a.html('&#9658;');
+        $(this).show();
+      } else {
+        $(this).hide();
+      }
     });
-  // add global toggle to first line
-  $('span[class=lineno]:first').append('<span class="fold" id="fold_all" '+
-                                             'onclick="javascript:codefold_toggle_all('+relPath+');" '+
-                                             'style="background-image:'+minusImg[relPath]+';"></span>');
-  // add vertical lines to other rows
-  $('span[class=lineno]').not(':eq(0)').append('<span class="fold"></span>');
-  // add toggle controls to lines with fold divs
-  $('div[class=foldopen]').each(function() {
-    // extract specific id to use
-    var id    = $(this).attr('id').replace('foldopen','');
-    // extract start and end foldable fragment attributes
-    var start = $(this).attr('data-start');
-    var end   = $(this).attr('data-end');
-    // replace normal fold span with controls for the first line of a foldable fragment
-    $(this).find('span[class=fold]:first').replaceWith('<span class="fold" '+
-                                                       'onclick="javascript:codefold_toggle(\''+id+'\');" '+
-                                                       'style="background-image:'+minusImg[relPath]+';"></span>');
-    // append div for folded (closed) representation
-    $(this).after('<div id="foldclosed'+id+'" class="foldclosed" style="display:none;"></div>');
-    // extract the first line from the "open" section to represent closed content
-    var line = $(this).children().first().clone();
-    // remove any glow that might still be active on the original line
-    $(line).removeClass('glow');
-    if (start) {
-      // if line already ends with a start marker (e.g. trailing {), remove it
-      $(line).html($(line).html().replace(new RegExp('\\s*'+start+'\\s*$','g'),''));
-    }
-    // replace minus with plus symbol
-    $(line).find('span[class=fold]').css('background-image',plusImg[relPath]);
-    // append ellipsis
-    $(line).append(' '+start+'<a href="javascript:codefold_toggle(\''+id+'\')">&#8230;</a>'+end);
-    // insert constructed line into closed div
-    $('#foldclosed'+id).html(line);
-  });
-}
+    this.updateStripes();
+  },
 
+  toggleFolder : function(id) {
+    // the clicked row
+    const currentRow = $('#row_'+id);
+
+    // all rows after the clicked row
+    const rows = currentRow.nextAll("tr");
+
+    const re = new RegExp('^row_'+id+'\\d+_$', "i"); //only one sub
+
+    // only match elements AFTER this one (can't hide elements before)
+    const childRows = rows.filter(function() { return this.id.match(re); });
+
+    // first row is visible we are HIDING
+    if (childRows.filter(':first').is(':visible')===true) {
+      // replace down arrow by right arrow for current row
+      const currentRowSpans = currentRow.find("span");
+      currentRowSpans.filter(".iconfopen").removeClass("iconfopen").addClass("iconfclosed");
+      currentRowSpans.filter(".arrow").html('&#9658;');
+      rows.filter("[id^=row_"+id+"]").hide(); // hide all children
+    } else { // we are SHOWING
+      // replace right arrow by down arrow for current row
+      const currentRowSpans = currentRow.find("span");
+      currentRowSpans.filter(".iconfclosed").removeClass("iconfclosed").addClass("iconfopen");
+      currentRowSpans.filter(".arrow").html('&#9660;');
+      // replace down arrows by right arrows for child rows
+      const childRowsSpans = childRows.find("span");
+      childRowsSpans.filter(".iconfopen").removeClass("iconfopen").addClass("iconfclosed");
+      childRowsSpans.filter(".arrow").html('&#9658;');
+      childRows.show(); //show all children
+    }
+    this.updateStripes();
+  },
+
+  toggleInherit : function(id) {
+    const rows = $('tr.inherit.'+id);
+    const img = $('tr.inherit_header.'+id+' img');
+    const src = $(img).attr('src');
+    if (rows.filter(':first').is(':visible')===true) {
+      rows.css('display','none');
+      $(img).attr('src',src.substring(0,src.length-8)+'closed.png');
+    } else {
+      rows.css('display','table-row'); // using show() causes jump in firefox
+      $(img).attr('src',src.substring(0,src.length-10)+'open.png');
+    }
+  },
+};
+
+let codefold = {
+  opened : true,
+
+  // in case HTML_COLORSTYLE is LIGHT or DARK the vars will be replaced, so we write them out explicitly and use double quotes
+  plusImg:  [ "url('plus.svg')",  "url('../../plus.svg')" ],
+  minusImg: [ "url('minus.svg')", "url('../../minus.svg')" ],
+
+  // toggle all folding blocks
+  toggle_all : function(relPath) {
+    if (this.opened) {
+      $('#fold_all').css('background-image',this.plusImg[relPath]);
+      $('div[id^=foldopen]').hide();
+      $('div[id^=foldclosed]').show();
+    } else {
+      $('#fold_all').css('background-image',this.minusImg[relPath]);
+      $('div[id^=foldopen]').show();
+      $('div[id^=foldclosed]').hide();
+    }
+    this.opened=!this.opened;
+  },
+
+  // toggle single folding block
+  toggle : function(id) {
+    $('#foldopen'+id).toggle();
+    $('#foldclosed'+id).toggle();
+  },
+
+  init : function(relPath) {
+    $('span[class=lineno]').css({
+      'padding-right':'4px',
+      'margin-right':'2px',
+      'display':'inline-block',
+      'width':'54px',
+      'background':'linear-gradient(#808080,#808080) no-repeat 46px/2px 100%'
+    });
+    // add global toggle to first line
+    $('span[class=lineno]:first').append('<span class="fold" id="fold_all" '+
+      'onclick="javascript:codefold.toggle_all('+relPath+');" '+
+      'style="background-image:'+this.minusImg[relPath]+';"></span>');
+    // add vertical lines to other rows
+    $('span[class=lineno]').not(':eq(0)').append('<span class="fold"></span>');
+    // add toggle controls to lines with fold divs
+    $('div[class=foldopen]').each(function() {
+      // extract specific id to use
+      const id    = $(this).attr('id').replace('foldopen','');
+      // extract start and end foldable fragment attributes
+      const start = $(this).attr('data-start');
+      const end   = $(this).attr('data-end');
+      // replace normal fold span with controls for the first line of a foldable fragment
+      $(this).find('span[class=fold]:first').replaceWith('<span class="fold" '+
+                   'onclick="javascript:codefold.toggle(\''+id+'\');" '+
+                   'style="background-image:'+codefold.minusImg[relPath]+';"></span>');
+      // append div for folded (closed) representation
+      $(this).after('<div id="foldclosed'+id+'" class="foldclosed" style="display:none;"></div>');
+      // extract the first line from the "open" section to represent closed content
+      const line = $(this).children().first().clone();
+      // remove any glow that might still be active on the original line
+      $(line).removeClass('glow');
+      if (start) {
+        // if line already ends with a start marker (e.g. trailing {), remove it
+        $(line).html($(line).html().replace(new RegExp('\\s*'+start+'\\s*$','g'),''));
+      }
+      // replace minus with plus symbol
+      $(line).find('span[class=fold]').css('background-image',codefold.plusImg[relPath]);
+      // append ellipsis
+      $(line).append(' '+start+'<a href="javascript:codefold.toggle(\''+id+'\')">&#8230;</a>'+end);
+      // insert constructed line into closed div
+      $('#foldclosed'+id).html(line);
+    });
+  },
+};
 /* @license-end */
diff --git a/docs/html/engine_2bindings_8cpp.html b/docs/html/engine_2bindings_8cpp.html
index 881734f8..a5ff0806 100644
--- a/docs/html/engine_2bindings_8cpp.html
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 <head>
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 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: src/python/engine/bindings.cpp File Reference</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
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 $(function() {
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-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
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-$(document).ready(function(){initNavTree('engine_2bindings_8cpp.html',''); initResizable(); });
+$(function(){initNavTree('engine_2bindings_8cpp.html',''); initResizable(true); });
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@@ -114,40 +121,40 @@ Include dependency graph for bindings.cpp:</div>
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 Concepts</h2></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">concept &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="concept_0d012022023301355052304263320136165002200160012126_1_1_is_dynamic_engine.html">@012022023301355052304263320136165002200160012126::IsDynamicEngine</a></td></tr>
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 Functions</h2></td></tr>
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 <h2 class="groupheader">Function Documentation</h2>
@@ -160,8 +167,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void abs_stype_register_dynamic_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
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         <tr>
           <td class="memname">void abs_stype_register_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
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@@ -196,8 +201,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void con_stype_register_graph_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
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           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
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@@ -232,8 +235,7 @@ Functions</h2></td></tr>
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           <td>(</td>
-          <td class="paramtype">py::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">py::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
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         <tr>
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           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
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         <tr>
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           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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 </table>
 <h2 class="groupheader">Function Documentation</h2>
@@ -152,8 +159,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void abs_stype_register_dynamic_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -170,8 +176,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void abs_stype_register_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -188,8 +193,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void con_stype_register_graph_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -206,8 +210,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_base_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -224,8 +227,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_bindings </td>
           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -242,8 +244,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_building_type_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -260,8 +261,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_construction_bindings </td>
           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -278,8 +278,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_diagnostic_bindings </td>
           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -296,8 +295,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_priming_bindings </td>
           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -314,8 +312,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_procedural_bindings </td>
           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -332,8 +329,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_reporting_type_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -350,8 +346,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_type_bindings </td>
           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -368,8 +363,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_types_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -386,8 +380,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_engine_view_bindings </td>
           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -404,8 +397,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void register_jacobian_type_bindings </td>
           <td>(</td>
-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -419,7 +411,7 @@ Functions</h2></td></tr>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/engine_2scratchpads_2bindings_8cpp.html b/docs/html/engine_2scratchpads_2bindings_8cpp.html
new file mode 100644
index 00000000..fcd8a702
--- /dev/null
+++ b/docs/html/engine_2scratchpads_2bindings_8cpp.html
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#nested-classes">Classes</a>  </div>
+  <div class="headertitle"><div class="title">formatters.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><code>#include &quot;<a class="el" href="blob_8h.html">gridfire/engine/scratchpads/blob.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="scratchpad__abstract_8h.html">gridfire/engine/scratchpads/scratchpad_abstract.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__graph__scratchpad_8h.html">gridfire/engine/scratchpads/engine_graph_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__adaptive__scratchpad_8h.html">gridfire/engine/scratchpads/engine_adaptive_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__multiscale__scratchpad_8h.html">gridfire/engine/scratchpads/engine_multiscale_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__defined__scratchpad_8h.html">gridfire/engine/scratchpads/engine_defined_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="logging_8h.html">gridfire/utils/logging.h</a>&quot;</code><br />
+<code>#include &lt;format&gt;</code><br />
+<code>#include &lt;string&gt;</code><br />
+<code>#include &lt;string_view&gt;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for formatters.h:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine_2scratchpads_2formatters_8h__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine_2scratchpads_2formatters_8h__dep__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
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+<tr class="memitem:a7fa4b4931eb98910018ecb9e6d37a778" id="r_a7fa4b4931eb98910018ecb9e6d37a778"><td class="memItemLeft" align="right" valign="top">consteval size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a7fa4b4931eb98910018ecb9e6d37a778">gridfire::engine::scratch::get_max_scratchpad_types</a> ()</td></tr>
+<tr class="memdesc:a7fa4b4931eb98910018ecb9e6d37a778"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the maximum number of scratchpad types at compile time.  <br /></td></tr>
+<tr class="separator:a7fa4b4931eb98910018ecb9e6d37a778"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aca27b37993186128808c8fdd96c54849" id="r_aca27b37993186128808c8fdd96c54849"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#aca27b37993186128808c8fdd96c54849">gridfire::engine::scratch::get_scratchpad_type_name</a> (const <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> scratchpad_type)</td></tr>
+<tr class="memdesc:aca27b37993186128808c8fdd96c54849"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert a <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> to a human-readable name.  <br /></td></tr>
+<tr class="separator:aca27b37993186128808c8fdd96c54849"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Type definitions and utilities for the scratchpad system. </p>
+<p>This header defines the ScratchPadType enumeration which identifies all registered scratchpad types in the system, along with utility functions for querying scratchpad type information at compile-time and runtime.</p>
+<dl class="section user"><dt>Purpose</dt><dd>The types header provides:<ul>
+<li>A centralized enumeration of all scratchpad types</li>
+<li>Compile-time constant for the maximum number of scratchpad types</li>
+<li>Runtime conversion of scratchpad types to human-readable names</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Adding New Scratchpad Types</dt><dd>To add a new scratchpad type:<ol type="1">
+<li>Add a new enumerator before <code>_COUNT</code> in ScratchPadType</li>
+<li>Add a corresponding case in get_scratchpad_type_name()</li>
+<li>Create the concrete scratchpad class with a static <code>ID</code> member set to the new type</li>
+</ol>
+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="keyword">using namespace </span><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a>;</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Get the maximum number of scratchpad types at compile time</span></div>
+<div class="line"><span class="keyword">constexpr</span> <span class="keywordtype">size_t</span> max_types = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#a7fa4b4931eb98910018ecb9e6d37a778">get_max_scratchpad_types</a>();</div>
+<div class="line">std::array&lt;bool, max_types&gt; enrolled_flags{};</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Get a human-readable name for a scratchpad type</span></div>
+<div class="line"><a class="code hl_enumeration" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> type = <a class="code hl_enumvalue" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a>;</div>
+<div class="line">std::string_view name = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#aca27b37993186128808c8fdd96c54849">get_scratchpad_type_name</a>(type);</div>
+<div class="line"><span class="comment">// name == &quot;GraphEngineScratchPad&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Iterate over all scratchpad types</span></div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> i = 0; i &lt; <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#a7fa4b4931eb98910018ecb9e6d37a778">get_max_scratchpad_types</a>(); ++i) {</div>
+<div class="line">    <span class="keyword">auto</span> type = <span class="keyword">static_cast&lt;</span><a class="code hl_enumeration" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a><span class="keyword">&gt;</span>(i);</div>
+<div class="line">    std::cout &lt;&lt; <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#aca27b37993186128808c8fdd96c54849">get_scratchpad_type_name</a>(type) &lt;&lt; <span class="stringliteral">&quot;\n&quot;</span>;</div>
+<div class="line">}</div>
+<div class="ttc" id="aengine_2scratchpads_2types_8h_html"><div class="ttname"><a href="engine_2scratchpads_2types_8h.html">types.h</a></div><div class="ttdoc">Type definitions and utilities for the scratchpad system.</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a61cbbc8ec7103cc74fc8e549fd0649be"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">gridfire::engine::scratch::ScratchPadType</a></div><div class="ttdeci">ScratchPadType</div><div class="ttdoc">Enumeration of all registered scratchpad types.</div><div class="ttdef"><b>Definition</b> types.h:64</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">gridfire::engine::scratch::ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a></div><div class="ttdeci">@ GRAPH_ENGINE_SCRATCHPAD</div><div class="ttdoc">GraphEngineScratchPad for CppAD-based engines.</div><div class="ttdef"><b>Definition</b> types.h:65</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a7fa4b4931eb98910018ecb9e6d37a778"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#a7fa4b4931eb98910018ecb9e6d37a778">gridfire::engine::scratch::get_max_scratchpad_types</a></div><div class="ttdeci">consteval size_t get_max_scratchpad_types()</div><div class="ttdoc">Get the maximum number of scratchpad types at compile time.</div><div class="ttdef"><b>Definition</b> types.h:93</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_aca27b37993186128808c8fdd96c54849"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#aca27b37993186128808c8fdd96c54849">gridfire::engine::scratch::get_scratchpad_type_name</a></div><div class="ttdeci">constexpr std::string_view get_scratchpad_type_name(const ScratchPadType scratchpad_type)</div><div class="ttdoc">Convert a ScratchPadType to a human-readable name.</div><div class="ttdef"><b>Definition</b> types.h:121</div></div>
+</div><!-- fragment --></dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AbstractScratchPad </dd>
+<dd>
+StateBlob </dd></dl>
+</div></div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
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+  <ul>
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+<p>Utility functions for convenient scratchpad retrieval with exception handling.  
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+<div class="textblock"><code>#include &quot;<a class="el" href="blob_8h.html">gridfire/engine/scratchpads/blob.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="error__scratchpad_8h.html">gridfire/exceptions/error_scratchpad.h</a>&quot;</code><br />
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+</div>
+</div><table class="memberdecls">
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+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
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+</table><table class="memberdecls">
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+<tr class="memdesc:ab8f89f710094bfc93b84e26c818249b9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a scratchpad from a <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>, throwing on error.  <br /></td></tr>
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+<tr class="memitem:a322cc33cefc958d2507229aa283e8d4e"><td class="memTemplItemLeft" align="right" valign="top">const CTX *&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a322cc33cefc958d2507229aa283e8d4e">gridfire::engine::scratch::get_state</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;ctx)</td></tr>
+<tr class="memdesc:a322cc33cefc958d2507229aa283e8d4e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a const scratchpad from a const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>, throwing on error.  <br /></td></tr>
+<tr class="separator:a322cc33cefc958d2507229aa283e8d4e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aeae70212ece1d604b41e434641bd4291" id="r_aeae70212ece1d604b41e434641bd4291"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </td></tr>
+<tr class="memitem:aeae70212ece1d604b41e434641bd4291"><td class="memTemplItemLeft" align="right" valign="top">CTX *&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#aeae70212ece1d604b41e434641bd4291">gridfire::engine::scratch::get_state</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;ctx)</td></tr>
+<tr class="memdesc:aeae70212ece1d604b41e434641bd4291"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a scratchpad with optional initialization check, throwing on error.  <br /></td></tr>
+<tr class="separator:aeae70212ece1d604b41e434641bd4291"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afd8f2cf5ed25a1c719ba1886836ff892" id="r_afd8f2cf5ed25a1c719ba1886836ff892"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </td></tr>
+<tr class="memitem:afd8f2cf5ed25a1c719ba1886836ff892"><td class="memTemplItemLeft" align="right" valign="top">const CTX *&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#afd8f2cf5ed25a1c719ba1886836ff892">gridfire::engine::scratch::get_state</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;ctx)</td></tr>
+<tr class="memdesc:afd8f2cf5ed25a1c719ba1886836ff892"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a const scratchpad with optional initialization check, throwing on error.  <br /></td></tr>
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+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Utility functions for convenient scratchpad retrieval with exception handling. </p>
+<p>This header provides helper functions that wrap StateBlob's get() methods, converting error codes into exceptions for simpler error handling. These utilities eliminate the need to manually check std::expected results and switch on error codes at every call site.</p>
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+<li>Consistent error messages across the codebase</li>
+<li>Both mutable and const-correct overloads</li>
+<li>Optional initialization checking via template parameter</li>
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+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine_2scratchpads_2utils_8h.html">gridfire/engine/scratchpads/utils.h</a>&quot;</span></div>
+<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__graph__scratchpad_8h.html">gridfire/engine/scratchpads/engine_graph_scratchpad.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="keyword">using namespace </span><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a>;</div>
+<div class="line"> </div>
+<div class="line"><span class="keywordtype">void</span> compute(<a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a>&amp; blob) {</div>
+<div class="line">    <span class="comment">// Simple retrieval - throws if not found</span></div>
+<div class="line">    <a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad&gt;</a>(blob);</div>
+<div class="line">    <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line"> </div>
+<div class="line">    <span class="comment">// Retrieval with initialization check - throws if not initialized</span></div>
+<div class="line">    <span class="keyword">auto</span>* initialized_scratch = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad, true&gt;</a>(blob);</div>
+<div class="line">    <span class="comment">// Safe to use - guaranteed to be initialized</span></div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="keywordtype">void</span> read_only_access(<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a>&amp; blob) {</div>
+<div class="line">    <span class="comment">// Const overload for read-only access</span></div>
+<div class="line">    <span class="keyword">const</span> <a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad&gt;</a>(blob);</div>
+<div class="line">    <span class="keywordtype">bool</span> ready = <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;is_initialized();</div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></div><div class="ttdoc">Container for managing a collection of typed scratchpad instances.</div><div class="ttdef"><b>Definition</b> blob.h:114</div></div>
+<div class="ttc" id="aengine_2scratchpads_2utils_8h_html"><div class="ttname"><a href="engine_2scratchpads_2utils_8h.html">utils.h</a></div><div class="ttdoc">Utility functions for convenient scratchpad retrieval with exception handling.</div></div>
+<div class="ttc" id="aengine__graph__scratchpad_8h_html"><div class="ttname"><a href="engine__graph__scratchpad_8h.html">engine_graph_scratchpad.h</a></div><div class="ttdoc">Scratchpad implementation for the GraphEngine using CppAD automatic differentiation.</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_ab8f89f710094bfc93b84e26c818249b9"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">gridfire::engine::scratch::get_state</a></div><div class="ttdeci">CTX * get_state(StateBlob &amp;ctx)</div><div class="ttdoc">Retrieve a scratchpad from a StateBlob, throwing on error.</div><div class="ttdef"><b>Definition</b> utils.h:84</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></div><div class="ttdoc">Scratchpad for storing CppAD automatic differentiation state for GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:83</div></div>
+</div><!-- fragment --></dd></dl>
+<dl class="section user"><dt>Thread Safety</dt><dd>These functions inherit the thread safety characteristics of StateBlob. They are <b>not thread-safe</b> - each thread should operate on its own StateBlob instance.</dd></dl>
+<dl class="section see"><dt>See also</dt><dd>StateBlob </dd>
+<dd>
+IsScratchPad </dd>
+<dd>
+exceptions::ScratchPadError </dd></dl>
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 <p>Abstract interfaces for reaction network engines in GridFire.  
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-<code>#include &quot;<a class="el" href="types_8h.html">gridfire/types/types.h</a>&quot;</code><br />
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+<code>#include &quot;<a class="el" href="blob_8h.html">gridfire/engine/scratchpads/blob.h</a>&quot;</code><br />
 <code>#include &quot;fourdst/composition/composition_abstract.h&quot;</code><br />
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+<a href="#nested-classes">Classes</a> &#124;
+<a href="#namespaces">Namespaces</a>  </div>
+  <div class="headertitle"><div class="title">engine_adaptive_scratchpad.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad implementation for the AdaptiveEngineView.  
+<a href="#details">More...</a></p>
+<div class="textblock"><code>#include &quot;<a class="el" href="scratchpad__abstract_8h.html">gridfire/engine/scratchpads/scratchpad_abstract.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__adaptive_8h.html">gridfire/engine/views/engine_adaptive.h</a>&quot;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for engine_adaptive_scratchpad.h:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__adaptive__scratchpad_8h__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__adaptive__scratchpad_8h__dep__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
+Classes</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for storing working memory used by <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> computations.  <a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad implementation for the AdaptiveEngineView. </p>
+<p>This header defines the AdaptiveEngineViewScratchPad, a concrete implementation of AbstractScratchPad designed for use with the AdaptiveEngineView. It provides thread-local storage for active species and reactions that are dynamically determined during adaptive network computations.</p>
+<dl class="section user"><dt>Purpose</dt><dd>The AdaptiveEngineViewScratchPad stores:<ul>
+<li>The set of currently active species in the adaptive network</li>
+<li>The set of currently active reactions based on network topology</li>
+<li>Initialization state to track whether the scratchpad is ready for use</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__adaptive__scratchpad_8h.html">gridfire/engine/scratchpads/engine_adaptive_scratchpad.h</a>&quot;</span></div>
+<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__adaptive_8h.html">gridfire/engine/views/engine_adaptive.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create and initialize the scratchpad from an AdaptiveEngineView</span></div>
+<div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a> scratch;</div>
+<div class="line">AdaptiveEngineView engine = create_adaptive_engine();</div>
+<div class="line">scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a8fc25bac8529777504a206fc9fa2a5d6">initialize</a>(engine);</div>
+<div class="line"> </div>
+<div class="line"><span class="keywordflow">if</span> (scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a2ad134e1451dc0b5544f293d142c8c71">is_initialized</a>()) {</div>
+<div class="line">    <span class="comment">// Access active species for computation</span></div>
+<div class="line">    <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>&amp; species : scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#acedd3559de9a91a14f8ddfbf14897d9c">active_species</a>) {</div>
+<div class="line">        <span class="comment">// Process each active species</span></div>
+<div class="line">    }</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Clone for parallel execution</span></div>
+<div class="line"><span class="keyword">auto</span> worker_scratch = scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#ae2cd00926412c7ef78dbfb4647cc2495">clone</a>();</div>
+<div class="ttc" id="aengine__adaptive_8h_html"><div class="ttname"><a href="engine__adaptive_8h.html">engine_adaptive.h</a></div></div>
+<div class="ttc" id="aengine__adaptive__scratchpad_8h_html"><div class="ttname"><a href="engine__adaptive__scratchpad_8h.html">engine_adaptive_scratchpad.h</a></div><div class="ttdoc">Scratchpad implementation for the AdaptiveEngineView.</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for storing working memory used by AdaptiveEngineView computations.</div><div class="ttdef"><b>Definition</b> engine_adaptive_scratchpad.h:66</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_html_a2ad134e1451dc0b5544f293d142c8c71"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a2ad134e1451dc0b5544f293d142c8c71">gridfire::engine::scratch::AdaptiveEngineViewScratchPad::is_initialized</a></div><div class="ttdeci">bool is_initialized() const override</div><div class="ttdoc">Check whether the scratchpad has been initialized.</div><div class="ttdef"><b>Definition</b> engine_adaptive_scratchpad.h:84</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_html_a8fc25bac8529777504a206fc9fa2a5d6"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a8fc25bac8529777504a206fc9fa2a5d6">gridfire::engine::scratch::AdaptiveEngineViewScratchPad::initialize</a></div><div class="ttdeci">void initialize(const AdaptiveEngineView &amp;engine)</div><div class="ttdoc">Initialize the scratchpad from an AdaptiveEngineView.</div><div class="ttdef"><b>Definition</b> engine_adaptive_scratchpad.h:102</div></div>
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+</div><!-- fragment --></dd></dl>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. Each thread should have its own instance of AdaptiveEngineViewScratchPad. Use clone() to create independent copies for parallel workers.</dd></dl>
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+<!-- Node45&#45;&gt;Node48 -->
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+<title>Node45&#45;&gt;Node48</title>
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+<!-- Node48&#45;&gt;Node8 -->
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+<title>Node48&#45;&gt;Node8</title>
+<g id="a_edge72_Node000048_Node000008"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1165.87,-68.73C1170.64,-67.9 1175.4,-67.14 1180,-66.5 1405.1,-35.45 1464.33,-57.1 1690,-30.5 1698.06,-29.55 1706.52,-28.37 1714.85,-27.1"/>
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+<g id="edge73_Node000048_Node000009" class="edge">
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+<!-- Node48&#45;&gt;Node11 -->
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+<title>Node48&#45;&gt;Node11</title>
+<g id="a_edge74_Node000048_Node000011"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1056.08,-73.48C961.73,-60.98 770.06,-35.59 677.03,-23.27"/>
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+<g id="edge75_Node000048_Node000012" class="edge">
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-<!-- Node48&#45;&gt;Node22 -->
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+<!-- Node48&#45;&gt;Node40 -->
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+<title>Node48&#45;&gt;Node40</title>
+<g id="a_edge76_Node000048_Node000040"><a xlink:title=" ">
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-<!-- Node48&#45;&gt;Node36 -->
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-<title>Node48&#45;&gt;Node36</title>
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+<!-- Node51&#45;&gt;Node43 -->
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+<title>Node51&#45;&gt;Node43</title>
+<g id="a_edge78_Node000051_Node000043"><a xlink:title=" ">
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+</g>
+</g>
+<!-- Node58&#45;&gt;Node9 -->
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+<title>Node58&#45;&gt;Node9</title>
+<g id="a_edge94_Node000058_Node000009"><a xlink:title=" ">
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+</g>
+<!-- Node58&#45;&gt;Node10 -->
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+<title>Node58&#45;&gt;Node10</title>
+<g id="a_edge96_Node000058_Node000010"><a xlink:title=" ">
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+</g>
+<!-- Node58&#45;&gt;Node12 -->
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+<title>Node58&#45;&gt;Node12</title>
+<g id="a_edge98_Node000058_Node000012"><a xlink:title=" ">
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+<!-- Node58&#45;&gt;Node22 -->
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+<title>Node58&#45;&gt;Node22</title>
+<g id="a_edge97_Node000058_Node000022"><a xlink:title=" ">
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+<!-- Node58&#45;&gt;Node43 -->
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+<title>Node58&#45;&gt;Node43</title>
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+</g>
+<!-- Node58&#45;&gt;Node51 -->
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+<title>Node58&#45;&gt;Node51</title>
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+</g>
+<!-- Node61&#45;&gt;Node5 -->
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+<title>Node61&#45;&gt;Node5</title>
+<g id="a_edge114_Node000061_Node000005"><a xlink:title=" ">
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+<!-- Node61&#45;&gt;Node8 -->
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+<title>Node61&#45;&gt;Node8</title>
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+<!-- Node61&#45;&gt;Node12 -->
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+<title>Node61&#45;&gt;Node12</title>
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+<!-- Node61&#45;&gt;Node19 -->
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+<title>Node61&#45;&gt;Node19</title>
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+<!-- Node61&#45;&gt;Node35 -->
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+<title>Node61&#45;&gt;Node35</title>
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+<!-- Node61&#45;&gt;Node36 -->
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+<title>Node61&#45;&gt;Node36</title>
+<g id="a_edge112_Node000061_Node000036"><a xlink:title=" ">
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+<!-- Node61&#45;&gt;Node62 -->
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diff --git a/docs/html/engine__defined_8h__incl.map b/docs/html/engine__defined_8h__incl.map
index 4b93aefe..3569054c 100644
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+  <div class="summary">
+<a href="#nested-classes">Classes</a> &#124;
+<a href="#namespaces">Namespaces</a>  </div>
+  <div class="headertitle"><div class="title">engine_defined_scratchpad.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad implementation for the DefinedEngineView.  
+<a href="#details">More...</a></p>
+<div class="textblock"><code>#include &quot;<a class="el" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="scratchpad__abstract_8h.html">gridfire/engine/scratchpads/scratchpad_abstract.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="reaction_8h.html">gridfire/reaction/reaction.h</a>&quot;</code><br />
+<code>#include &quot;fourdst/atomic/atomicSpecies.h&quot;</code><br />
+<code>#include &lt;vector&gt;</code><br />
+<code>#include &lt;memory&gt;</code><br />
+<code>#include &lt;set&gt;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for engine_defined_scratchpad.h:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__defined__scratchpad_8h__incl.svg" width="100%" height="483"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__defined__scratchpad_8h__dep__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
+Classes</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for storing working memory used by defined reaction network engines.  <a href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad implementation for the DefinedEngineView. </p>
+<p>This header defines the DefinedEngineViewScratchPad, a concrete implementation of AbstractScratchPad designed for use with engines that have a statically defined reaction network. It provides storage for the active species, reactions, and index mappings that enable efficient lookups during computations.</p>
+<dl class="section user"><dt>Purpose</dt><dd>The DefinedEngineViewScratchPad stores:<ul>
+<li>The set of active species in the defined network</li>
+<li>The set of active reactions in the defined network</li>
+<li>Index mappings for efficient species and reaction lookups</li>
+<li>A cached vector representation of active species for performance</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__defined__scratchpad_8h.html">gridfire/engine/scratchpads/engine_defined_scratchpad.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create a scratchpad for a defined engine</span></div>
+<div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a> scratch;</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Populate active species</span></div>
+<div class="line">scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a20a1293b8d217a2c78c64c4da2976103">active_species</a>.insert(species1);</div>
+<div class="line">scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a20a1293b8d217a2c78c64c4da2976103">active_species</a>.insert(species2);</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Set up index mappings for efficient lookups</span></div>
+<div class="line">scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a05c0fe3d8e07eabff28b719e7565fccb">species_index_map</a> = {0, 1, 2, 3};</div>
+<div class="line">scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a95b8528f60ca591bb9d8833e68cd6924">reaction_index_map</a> = {0, 1};</div>
+<div class="line"> </div>
+<div class="line"><span class="keywordflow">if</span> (scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a8820a147ba891c656dea16b3dd2d20da">is_initialized</a>()) {</div>
+<div class="line">    <span class="comment">// Use the scratchpad for computations</span></div>
+<div class="line">    <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> idx : scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a05c0fe3d8e07eabff28b719e7565fccb">species_index_map</a>) {</div>
+<div class="line">        <span class="comment">// Process species by index</span></div>
+<div class="line">    }</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Clone for parallel execution</span></div>
+<div class="line"><span class="keyword">auto</span> worker_scratch = scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#ae6c007066aee6807530c8611e717024d">clone</a>();</div>
+<div class="ttc" id="aengine__defined__scratchpad_8h_html"><div class="ttname"><a href="engine__defined__scratchpad_8h.html">engine_defined_scratchpad.h</a></div><div class="ttdoc">Scratchpad implementation for the DefinedEngineView.</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for storing working memory used by defined reaction network engines.</div><div class="ttdef"><b>Definition</b> engine_defined_scratchpad.h:80</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_html_a05c0fe3d8e07eabff28b719e7565fccb"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a05c0fe3d8e07eabff28b719e7565fccb">gridfire::engine::scratch::DefinedEngineViewScratchPad::species_index_map</a></div><div class="ttdeci">std::vector&lt; size_t &gt; species_index_map</div><div class="ttdoc">Mapping from local indices to global species indices.</div><div class="ttdef"><b>Definition</b> engine_defined_scratchpad.h:94</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_html_a20a1293b8d217a2c78c64c4da2976103"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a20a1293b8d217a2c78c64c4da2976103">gridfire::engine::scratch::DefinedEngineViewScratchPad::active_species</a></div><div class="ttdeci">std::set&lt; fourdst::atomic::Species &gt; active_species</div><div class="ttdoc">Set of species active in the defined network.</div><div class="ttdef"><b>Definition</b> engine_defined_scratchpad.h:88</div></div>
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+</div><!-- fragment --></dd></dl>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. Each thread should have its own instance of DefinedEngineViewScratchPad. Use clone() to create independent copies for parallel workers.</dd></dl>
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+<code>#include &quot;<a class="el" href="blob_8h.html">gridfire/engine/scratchpads/blob.h</a>&quot;</code><br />
+<code>#include &quot;ankerl/unordered_dense.h&quot;</code><br />
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diff --git a/docs/html/engine__graph__scratchpad_8h.html b/docs/html/engine__graph__scratchpad_8h.html
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+  <div class="summary">
+<a href="#nested-classes">Classes</a> &#124;
+<a href="#namespaces">Namespaces</a>  </div>
+  <div class="headertitle"><div class="title">engine_graph_scratchpad.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad implementation for the GraphEngine using CppAD automatic differentiation.  
+<a href="#details">More...</a></p>
+<div class="textblock"><code>#include &lt;vector&gt;</code><br />
+<code>#include &quot;<a class="el" href="scratchpad__abstract_8h.html">gridfire/engine/scratchpads/scratchpad_abstract.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__graph_8h.html">gridfire/engine/engine_graph.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__abstract_8h.html">gridfire/engine/engine_abstract.h</a>&quot;</code><br />
+<code>#include &quot;cppad/cppad.hpp&quot;</code><br />
+<code>#include &lt;optional&gt;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for engine_graph_scratchpad.h:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__graph__scratchpad_8h__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__graph__scratchpad_8h__dep__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
+Classes</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for storing CppAD automatic differentiation state for <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a>.  <a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad implementation for the GraphEngine using CppAD automatic differentiation. </p>
+<p>This header defines the GraphEngineScratchPad, a concrete implementation of AbstractScratchPad designed for use with the GraphEngine. It provides thread-local storage for CppAD automatic differentiation functions, Jacobian computation work structures, and cached derivatives used during ODE integration.</p>
+<dl class="section user"><dt>Purpose</dt><dd>The GraphEngineScratchPad stores:<ul>
+<li>A local copy of the CppAD ADFun for RHS evaluation</li>
+<li>Work structures for sparse Jacobian calculations</li>
+<li>Cached abundance values for efficient reuse</li>
+<li>Cached step derivatives and Jacobian subsets by timestep</li>
+<li>The most recent RHS calculation for warm-starting</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__graph__scratchpad_8h.html">gridfire/engine/scratchpads/engine_graph_scratchpad.h</a>&quot;</span></div>
+<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__graph_8h.html">gridfire/engine/engine_graph.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create and initialize the scratchpad from a GraphEngine</span></div>
+<div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a> scratch;</div>
+<div class="line">GraphEngine engine = create_graph_engine();</div>
+<div class="line">scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#adcd7fe8dfb789527428a868e646053ca">initialize</a>(engine);</div>
+<div class="line"> </div>
+<div class="line"><span class="keywordflow">if</span> (scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ac31f77dafaa622ad33496a451caca1ba">is_initialized</a>()) {</div>
+<div class="line">    <span class="comment">// Access the local ADFun for thread-safe evaluation</span></div>
+<div class="line">    <span class="keyword">auto</span>&amp; adfun = scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af484620a6c7022af3e0775bfa2568f79">rhsADFun</a>.value();</div>
+<div class="line"> </div>
+<div class="line">    <span class="comment">// Use cached Jacobian work for efficient sparse computations</span></div>
+<div class="line">    <span class="keyword">auto</span>&amp; jac_work = scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#a880842c920f730a70b11fef372e267c0">jac_work</a>;</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Clone for parallel execution</span></div>
+<div class="line"><span class="keyword">auto</span> worker_scratch = scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aa5ececd1fb07a0aabb662c42dcb824b5">clone</a>();</div>
+<div class="ttc" id="aengine__graph_8h_html"><div class="ttname"><a href="engine__graph_8h.html">engine_graph.h</a></div></div>
+<div class="ttc" id="aengine__graph__scratchpad_8h_html"><div class="ttname"><a href="engine__graph__scratchpad_8h.html">engine_graph_scratchpad.h</a></div><div class="ttdoc">Scratchpad implementation for the GraphEngine using CppAD automatic differentiation.</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></div><div class="ttdoc">Scratchpad for storing CppAD automatic differentiation state for GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:83</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html_a880842c920f730a70b11fef372e267c0"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#a880842c920f730a70b11fef372e267c0">gridfire::engine::scratch::GraphEngineScratchPad::jac_work</a></div><div class="ttdeci">CppAD::sparse_jac_work jac_work</div><div class="ttdoc">Work structure for sparse Jacobian calculations.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:98</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html_aa5ececd1fb07a0aabb662c42dcb824b5"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aa5ececd1fb07a0aabb662c42dcb824b5">gridfire::engine::scratch::GraphEngineScratchPad::clone</a></div><div class="ttdeci">std::unique_ptr&lt; AbstractScratchPad &gt; clone() const override</div><div class="ttdoc">Create a deep copy of this scratchpad.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:185</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html_ac31f77dafaa622ad33496a451caca1ba"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ac31f77dafaa622ad33496a451caca1ba">gridfire::engine::scratch::GraphEngineScratchPad::is_initialized</a></div><div class="ttdeci">bool is_initialized() const override</div><div class="ttdoc">Check whether the scratchpad has been initialized.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:125</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html_adcd7fe8dfb789527428a868e646053ca"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#adcd7fe8dfb789527428a868e646053ca">gridfire::engine::scratch::GraphEngineScratchPad::initialize</a></div><div class="ttdeci">void initialize(const GraphEngine &amp;engine)</div><div class="ttdoc">Initialize the scratchpad from a GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:146</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html_af484620a6c7022af3e0775bfa2568f79"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af484620a6c7022af3e0775bfa2568f79">gridfire::engine::scratch::GraphEngineScratchPad::rhsADFun</a></div><div class="ttdeci">std::optional&lt; CppAD::ADFun&lt; double &gt; &gt; rhsADFun</div><div class="ttdoc">CppAD function object for evaluating the ODE right-hand side.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:94</div></div>
+</div><!-- fragment --></dd></dl>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. Each thread must have its own instance of GraphEngineScratchPad because CppAD ADFun objects maintain internal state that is modified during evaluation. Use clone() to create independent copies for parallel workers, ensuring each thread has its own ADFun instance.</dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AbstractScratchPad </dd>
+<dd>
+GraphEngine </dd>
+<dd>
+CppAD::ADFun </dd></dl>
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+<div class="header">
+  <div class="summary">
+<a href="#nested-classes">Classes</a> &#124;
+<a href="#namespaces">Namespaces</a>  </div>
+  <div class="headertitle"><div class="title">engine_multiscale_scratchpad.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad implementation for the MultiscalePartitioningEngineView.  
+<a href="#details">More...</a></p>
+<div class="textblock"><code>#include &quot;<a class="el" href="engine__multiscale_8h.html">gridfire/engine/views/engine_multiscale.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="scratchpad__abstract_8h.html">gridfire/engine/scratchpads/scratchpad_abstract.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</code><br />
+<code>#include &quot;fourdst/atomic/atomicSpecies.h&quot;</code><br />
+<code>#include &lt;vector&gt;</code><br />
+<code>#include &lt;memory&gt;</code><br />
+<code>#include &lt;unordered_map&gt;</code><br />
+<code>#include &quot;sundials/sundials_context.h&quot;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for engine_multiscale_scratchpad.h:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__multiscale__scratchpad_8h__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="engine__multiscale__scratchpad_8h__dep__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
+Classes</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for multiscale partitioning engine computations with QSE groups.  <a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad implementation for the MultiscalePartitioningEngineView. </p>
+<p>This header defines the MultiscalePartitioningEngineViewScratchPad, a concrete implementation of AbstractScratchPad designed for use with multiscale partitioning algorithms. It provides thread-local storage for QSE (Quasi-Static Equilibrium) groups, solvers, species classifications, and SUNDIALS contexts required for solving stiff subsystems.</p>
+<dl class="section user"><dt>Purpose</dt><dd>The MultiscalePartitioningEngineViewScratchPad stores:<ul>
+<li>QSE groups representing clusters of species in quasi-static equilibrium</li>
+<li>QSE solvers for each group (managed via unique_ptr)</li>
+<li>Classification of species into dynamic vs. algebraic categories</li>
+<li>A composition cache for efficient lookup of computed compositions</li>
+<li>A SUNDIALS context for numerical solver operations</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__multiscale__scratchpad_8h.html">gridfire/engine/scratchpads/engine_multiscale_scratchpad.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create and initialize the scratchpad</span></div>
+<div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a> scratch;</div>
+<div class="line">scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a97f1fffc38872df3edd8c681685aa1fc">initialize</a>();</div>
+<div class="line"> </div>
+<div class="line"><span class="keywordflow">if</span> (scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ae61c7a93f9d4f8ded1e9c9dd2221d864">is_initialized</a>()) {</div>
+<div class="line">    <span class="comment">// Add QSE groups and species classifications</span></div>
+<div class="line">    scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a38ea81d9d616cd0f74747e44948f4ab9">dynamic_species</a>.push_back(hydrogen);</div>
+<div class="line">    scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a38ea81d9d616cd0f74747e44948f4ab9">dynamic_species</a>.push_back(helium);</div>
+<div class="line">    scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a07552ac293e905112014c421ea15eb2f">algebraic_species</a>.push_back(carbon);</div>
+<div class="line"> </div>
+<div class="line">    <span class="comment">// Use the SUNDIALS context for solver operations</span></div>
+<div class="line">    SUNContext ctx = scratch.<a class="code hl_variable" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a735335d563bb612f19b531107c89fab6">sun_ctx</a>;</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Clone for parallel execution (note: solvers not cloned)</span></div>
+<div class="line"><span class="keyword">auto</span> worker_scratch = scratch.<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a7dbce2e9a2f940cbde8888aa67f5f3aa">clone</a>();</div>
+<div class="line">worker_scratch-&gt;initialize();  <span class="comment">// Must re-initialize for new SUNContext</span></div>
+<div class="ttc" id="aengine__multiscale__scratchpad_8h_html"><div class="ttname"><a href="engine__multiscale__scratchpad_8h.html">engine_multiscale_scratchpad.h</a></div><div class="ttdoc">Scratchpad implementation for the MultiscalePartitioningEngineView.</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for multiscale partitioning engine computations with QSE groups.</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:90</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html_a07552ac293e905112014c421ea15eb2f"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a07552ac293e905112014c421ea15eb2f">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::algebraic_species</a></div><div class="ttdeci">std::vector&lt; Species &gt; algebraic_species</div><div class="ttdoc">Species that are solved algebraically (fast timescale/QSE).</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:120</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html_a38ea81d9d616cd0f74747e44948f4ab9"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a38ea81d9d616cd0f74747e44948f4ab9">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::dynamic_species</a></div><div class="ttdeci">std::vector&lt; Species &gt; dynamic_species</div><div class="ttdoc">Species that evolve on the dynamic (slow) timescale.</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:117</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html_a735335d563bb612f19b531107c89fab6"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a735335d563bb612f19b531107c89fab6">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::sun_ctx</a></div><div class="ttdeci">SUNContext sun_ctx</div><div class="ttdoc">SUNDIALS context for solver operations.</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:127</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html_a7dbce2e9a2f940cbde8888aa67f5f3aa"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a7dbce2e9a2f940cbde8888aa67f5f3aa">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::clone</a></div><div class="ttdeci">std::unique_ptr&lt; AbstractScratchPad &gt; clone() const override</div><div class="ttdoc">Create a partial copy of this scratchpad.</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:199</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html_a97f1fffc38872df3edd8c681685aa1fc"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a97f1fffc38872df3edd8c681685aa1fc">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::initialize</a></div><div class="ttdeci">void initialize()</div><div class="ttdoc">Initialize the scratchpad by creating a SUNDIALS context.</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:153</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html_ae61c7a93f9d4f8ded1e9c9dd2221d864"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ae61c7a93f9d4f8ded1e9c9dd2221d864">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::is_initialized</a></div><div class="ttdeci">bool is_initialized() const override</div><div class="ttdoc">Check whether the scratchpad has been initialized.</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:133</div></div>
+</div><!-- fragment --></dd></dl>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. Each thread must have its own instance because SUNDIALS contexts and QSE solvers maintain internal state. When cloning, the QSE solvers are not copied and the SUNContext is not cloned; the new instance must call initialize() to create its own context.</dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AbstractScratchPad </dd>
+<dd>
+MultiscalePartitioningEngineView </dd>
+<dd>
+SUNContext </dd></dl>
+</div></div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_b0856f6b0d80ccb263b2f415c91f9e17.html">include</a></li><li class="navelem"><a class="el" href="dir_3626e0c0e3c5d7812d6b277dfa4ec364.html">gridfire</a></li><li class="navelem"><a class="el" href="dir_aff155d61c3b73b9ab7dcdc908c4d49e.html">engine</a></li><li class="navelem"><a class="el" href="dir_65a5f8f804465673712f6f1daa9f9ade.html">scratchpads</a></li><li class="navelem"><a class="el" href="engine__multiscale__scratchpad_8h.html">engine_multiscale_scratchpad.h</a></li>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Triggers when the timestep deviates from its recent average beyond a threshold.  <a href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#details">More...</a><br /></td></tr>
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+    [ "gridfire::exceptions::UninitializedJacobianError", "classgridfire_1_1exceptions_1_1_uninitialized_jacobian_error.html", null ],
+    [ "gridfire::exceptions::UnknownJacobianError", "classgridfire_1_1exceptions_1_1_unknown_jacobian_error.html", null ]
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -95,76 +102,88 @@ $(document).ready(function(){initNavTree('functions_c.html',''); initResizable()
 <div class="textblock">Here is a list of all class members with links to the classes they belong to:</div>
 
 <h3><a id="index_c" name="index_c"></a>- c -</h3><ul>
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-<li>cleanup_cvode_resources()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a7f6786780137de1a136e081c537a9667">gridfire::solver::CVODESolverStrategy</a></li>
-<li>clear()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#aa8e0d65aafc6e0320690b4906e1bf300">gridfire::reaction::ReactionSet</a></li>
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-<li>CNOIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1CNOIIChainPolicy.html#aebcb36cb5cfbde4cf0e5b785c4b8cbd8">gridfire::policy::CNOIIChainPolicy</a></li>
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-<li>collectAtomicReverseRateAtomicBases()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a5fadd1bb2692e1527ce24295c77cfc72">gridfire::engine::GraphEngine</a></li>
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-<li>CompositePartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1CompositePartitionFunction.html#ad80743933712de627c6a69d06d42ceb5">gridfire::partition::CompositePartitionFunction</a></li>
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-<li>Config&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#a0a49d174e105adb3ffd9cf98ff58db3e">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a8d066e95f4cc201cbda90c2aec5d98c4">gridfire::engine::FileDefinedEngineView</a>, <a class="el" href="classgridfire_1_1io_1_1MESANetworkFileParser.html#af43ad8375abf1cedfdccc296b9958c2b">gridfire::io::MESANetworkFileParser</a>, <a class="el" href="classgridfire_1_1io_1_1SimpleReactionListFileParser.html#ad913155a5a2a36b29e4ce4ca8d71c036">gridfire::io::SimpleReactionListFileParser</a></li>
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-<li>countReactantOccurrences()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html#acfc3740ed0aa72986b2c1bc2666974d6">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#a79928f9c52822202b3156bd145e35ad8">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html#a036773e4dc917facbf2308dbbe853633">gridfire::reaction::Reaction</a></li>
-<li>ctx&#160;:&#160;<a class="el" href="structgridfire__mod_1_1gridfire.html#a8e15e0b0839783747bc7b046c56b3610">gridfire_mod::gridfire</a></li>
-<li>culling&#160;:&#160;<a class="el" href="structgridfire_1_1NetIn.html#a6a5e909b46094ffa20da9a3da906e43f">gridfire::NetIn</a></li>
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-<li>cvode_jac_wrapper()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#ae13fc9c21f595edbee1c9b7debaa61b3">gridfire::solver::CVODESolverStrategy</a></li>
-<li>cvode_rhs_wrapper()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a14c620ef75749c8ef3dfdb84132e5620">gridfire::solver::CVODESolverStrategy</a></li>
-<li>CVODESolverStrategy()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a8beeb102d8e459cd133cd1bd5fb7e135">gridfire::solver::CVODESolverStrategy</a></li>
+<li>c&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1constants.html#acb2760ecfe67d55b165c45f2bf80e560">gridfire::engine::GraphEngine::constants</a>, <a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1constants.html#ab176a60ea64181d84be3bb6496ad0b0e">gridfire::rates::weak::WeakReaction::constants</a></li>
+<li>calculate_energy_generation_rate()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#ae66b446c98add7e00a1d960f4e7c60dd">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a091d6d4aa59f788c97f9b5481f46f1b5">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ae66b446c98add7e00a1d960f4e7c60dd">gridfire::reaction::Reaction</a></li>
+<li>calculate_log_rate_partial_deriv_wrt_T9()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#aec9859c030364e1d4a740197514731db">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#ac2d5366d4b5766413db34558dbce3cb3">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#a9b1363314159eaf9c56aaa233f5eebd6">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ada6ec1ae05b9a92b58e6a4ecdf5a1656">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#aa2b615e764bb005e526ca9327319c735">gridfire::reaction::Reaction</a></li>
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+<li>calculate_rhs()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a866bd58075b05c95222dd95abb86ca25">gridfire::solver::PointSolver</a></li>
+<li>calculateAllDerivatives()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a5970c97be4c7b5b764ce1155b5c7f870">gridfire::engine::GraphEngine</a></li>
+<li>calculateAllDerivativesUsingPrecomputation()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad3ab19d036a9f1484f527442b2dad958">gridfire::engine::GraphEngine</a></li>
+<li>calculateAllReactionFlows()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a6e0d0029016a302b3209ba0275029479">gridfire::engine::AdaptiveEngineView</a></li>
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+<li>calculateReverseRateTwoBody()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#aa6b07108beeab1bc75c3099c25be7833">gridfire::engine::GraphEngine</a></li>
+<li>calculateReverseRateTwoBodyDerivative()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a83ef40080c62d667b3fee71237efd2e0">gridfire::engine::GraphEngine</a></li>
+<li>calculateRHSAndEnergy()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a4c51bcc65f1bc6afdb9487546775ce79">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a297412202e82ab25b6fc0a8a27a433e7">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a474ba2ca2d24cb90ee73af042993dd14">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add1058c32fbd02f5583cfda4cc60985c">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a1331900141bb079e634151abdea075dc">PyDynamicEngine</a>, <a class="el" href="class_py_engine.html#a63a2605b8d742d284924db397338da0b">PyEngine</a></li>
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+<li>captured_exception&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html#adb7ced0b812f675c3087b05d0810c56a">gridfire::solver::PointSolver::CVODEUserData</a></li>
+<li>causes&#160;:&#160;<a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html#a7cf4d21d3cd3e53b62736932b44072cd">gridfire::trigger::TriggerResult</a></li>
+<li>chapter&#160;:&#160;<a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html#a5c853b69a23b0a8c39ab4b55ac3fe3cc">gridfire::reaclib::ReactionRecord</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#abe189c43e4d509d9d05dd205861ceddc">gridfire::reaction::ReaclibReaction</a></li>
+<li>check()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#aaefdfa86856f9f7839b6a7fdffa4a579">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a69fbb099f8d13d39602f58fa8aa8e7f2">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ae453a72df20fdd416443ef7867f86b92">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#ac8be54d91e77ed16ae3cca2417d82e0a">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a8da692b030477f3a7d6d703cbcda0359">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#acd14b8c03540cd7eb9534e09729d7b85">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a57b44a91ada7cf5d86f7de18683d1f7c">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a75e4c5c1d58ed7169bce136c6370f34b">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#aa91e16acc6a71d319169cbf9e7cd97ce">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a1579ffb1c841cda4e67990b42d400d88">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
+<li>check_status()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#ac3263f792de714d5ffed31bfac17d808">gridfire::policy::MainSequencePolicy</a></li>
+<li>clear()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#aa8e0d65aafc6e0320690b4906e1bf300">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aa8e0d65aafc6e0320690b4906e1bf300">gridfire::reaction::ReactionSet</a></li>
+<li>clear_callback()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a2b11556cc7da39e1b1b4b86b77766abb">gridfire::solver::GridSolverContext</a></li>
+<li>clear_context()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a0b28b5c16fe1892c8f5ea14c7d2f153f">gridfire::solver::PointSolverContext</a></li>
+<li>clone()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a25d2fd5dc372c43afb1ffeafe08aa0fa">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a588a8c19970463d97f5aa333fcd312dc">gridfire::engine::Reaction</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">gridfire::engine::scratch::AbstractScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#ae2cd00926412c7ef78dbfb4647cc2495">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#ae6c007066aee6807530c8611e717024d">gridfire::engine::scratch::DefinedEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aa5ececd1fb07a0aabb662c42dcb824b5">gridfire::engine::scratch::GraphEngineScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a7dbce2e9a2f940cbde8888aa67f5f3aa">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a>, <a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#a7b000d55c7d1f489e54a57f7f4e3808a">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#ade2b0f92a3d9b74968166793466a11e4">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#a677a90f992fd56b8718e36655c33ce6d">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#ad229cac0a84df5ebbcaf0550f83debf6">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_chain_policy.html#a83042f4626ec22810314fa5181d3392a">gridfire::policy::CNOIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html#ab3aa5daaf2d9274770f981d8f67ae20b">gridfire::policy::CNOIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy.html#a9c0e056615742b3d77f47b3eb676ff28">gridfire::policy::CNOIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html#a35bef8035035eb85bb188ede6045556c">gridfire::policy::CNOIVChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html#ae70a448fdeee35e159784fd6a506dce7">gridfire::policy::HotCNOIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html#afeb9b237b70963715adc64ad68e11675">gridfire::policy::HotCNOIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html#a5d86341bb4370647762c889519793d41">gridfire::policy::HotCNOIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#ab3bbbf21164211a01c5398a0ee281bb2">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html#affd234a60ba31decca25b3367c7ede5e">gridfire::policy::ProtonProtonIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html#ad70b081f8623fad207050c0f81f6a457">gridfire::policy::ProtonProtonIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html#ac84ab054fc0f600f783ea3282d6fd4f6">gridfire::policy::ProtonProtonIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html#ac24ff49b7715ad3eefea4bed1bf23686">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html#a447ff0d2de9df09400e63f0fc087efa3">gridfire::policy::TripleAlphaChainPolicy</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#ac10e1451d20876f6eab199e127f213c7">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#ad113b9cb64c449f9449c4cce4fa64076">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a54fde02e7010e806136f976ab64b1740">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab95ce7fb022a9432bdc77f14679221ee">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#ac3fc463a1cea6854ea989732e1e5f65a">gridfire::reaction::WeakReaclibReaction</a>, <a class="el" href="class_py_partition_function.html#af918b357e38fb82499ad53584557c43d">PyPartitionFunction</a>, <a class="el" href="class_py_reaction_chain_policy.html#a0b44991bd6a5edebb861e78a26f783cd">PyReactionChainPolicy</a></li>
+<li>clone_structure()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa45357f0c368d7403306452c5ea56af0">gridfire::engine::scratch::StateBlob</a></li>
+<li>CNOChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_chain_policy.html#a5a526c6239c3a321c81484061a7a53e4">gridfire::policy::CNOChainPolicy</a></li>
+<li>CNOIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_chain_policy.html#a7b428233b7cd85bac48c0b4906f990ce">gridfire::policy::CNOIChainPolicy</a></li>
+<li>CNOIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html#aebcb36cb5cfbde4cf0e5b785c4b8cbd8">gridfire::policy::CNOIIChainPolicy</a></li>
+<li>CNOIIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy.html#af5ba73b9349e97fd1e2876ce9e9fac0b">gridfire::policy::CNOIIIChainPolicy</a></li>
+<li>CNOIVChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html#a3a73e280dca833ff6517bef9b9193aa1">gridfire::policy::CNOIVChainPolicy</a></li>
+<li>coeffs&#160;:&#160;<a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html#a80803f612e574859fde0a163bca84bc0">gridfire::reaclib::ReactionRecord</a></li>
+<li>collect()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a59680b2c95412edc7d9cda939282f2e1">gridfire::engine::DefinedEngineView</a></li>
+<li>collectAtomicReverseRateAtomicBases()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a5fadd1bb2692e1527ce24295c77cfc72">gridfire::engine::GraphEngine</a></li>
+<li>collectComposition()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a7d4d16693db712b1823377ad460f5144">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4002e188995b6c203dc391f381432e5b">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a1c977a772eedae1cceeb6b50d984fde4">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5c7669454b986ed20db8387e5724b2b0">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a60445db14a6bfd0eeef7c0a62d458a60">PyDynamicEngine</a></li>
+<li>collectNetworkSpecies()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8f29c77e777fdc6517f2c7778537ba6f">gridfire::engine::GraphEngine</a></li>
+<li>Column()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1_column.html#a7d7e4f4cf6f8e03725afeb9f664321b8">gridfire::utils::Column&lt; T &gt;</a></li>
+<li>comp&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html#abdf43266a5641c80c25fb2ab3391e40e">gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData</a></li>
+<li>CompositePartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#ad80743933712de627c6a69d06d42ceb5">gridfire::partition::CompositePartitionFunction</a></li>
+<li>composition&#160;:&#160;<a class="el" href="structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1">gridfire::NetIn</a>, <a class="el" href="structgridfire_1_1_net_out.html#a073529511ae0e52f868b47cce0e8ac0a">gridfire::NetOut</a></li>
+<li>composition_cache&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a2e02493490755a799f7dbc3322780c63">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>compute_neutrino_fluxes()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a698cbb0c4e0028924b116906787e342a">gridfire::engine::GraphEngine</a></li>
+<li>compute_reaction_flow()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ad6b75b38b3c67276ad5fe254a36bf8f6">gridfire::engine::GraphEngine</a></li>
+<li>constraints&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#acb4ff9703d8ce8ff25a2d0772f493a0c">gridfire::solver::PointSolverContext</a></li>
+<li>construct()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a3b600b9f02113d6ae3be22c556872ba9">gridfire::policy::MainSequencePolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#a1ee276d40dfdfe1bf313b29436cbcfba">gridfire::policy::NetworkPolicy</a>, <a class="el" href="class_py_network_policy.html#a685d2c695279edb3697d3552f9d3ba43">PyNetworkPolicy</a></li>
+<li>constructCandidateGroups()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0dd152322195c160c73b8d0821e83471">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>constructPrimingReactionSet()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ac407e948552378165474f0308d5fcd5f">gridfire::engine::NetworkPrimingEngineView</a></li>
+<li>constructReactionIndexMap()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af058b09a44f30332eece13f0d4ce9d9d">gridfire::engine::DefinedEngineView</a></li>
+<li>constructSpeciesIndexMap()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a85db72e3c0a4ce59345b6b92695a5d12">gridfire::engine::DefinedEngineView</a></li>
+<li>constructStateBlob()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a2e5d6985c84cc9c404080f8add5f5c18">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ac126bed6dcdfa6b2888efa3a769b4490">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a675024091dc64f8784204a78bab46d90">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#acfe338ed3b10a4f116e58b2693a7fe10">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a80dc129ae2fc3dd2f1d82e123e7cda3f">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a6dc693583383d7237b3cede639b41f5f">PyDynamicEngine</a></li>
+<li>contains()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#a64018f4dd6c225b0790a0fd4065a0972">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction.html#adaeb5d72faf7d55d4e26f6e1fcba21c1">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#ae5f8078e77a700a8356487fbd69ba387">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#a792cf0af8e5c365d0332cd585968dae1">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html#a0c9a42646920ac02c8d1e63dfe6f9461">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html#a8869287d36b3ff143e7f84799ef35dd9">gridfire::policy::TemperatureDependentChainPolicy</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a745b161968f37873b5d40fe6bf9d2118">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a171b690e1abaf23f11a94c39e9f8c944">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a768db057d358240d4825c21869af0792">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#ae5f8078e77a700a8356487fbd69ba387">gridfire::reaction::ReactionSet</a>, <a class="el" href="class_py_reaction_chain_policy.html#a16f289efd1d92eead3a3ca6fcfceba4d">PyReactionChainPolicy</a></li>
+<li>contains_product()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a5a17ca61d069749960e5a83e58c0b8a1">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a4bdf50219d686a6cbc0b3cc5365dc18e">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a957b5bfe70e536290ef677a7c5b6643f">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a4e4811436d09afaa4a14c51d9af71f88">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a2708d2e8f42159df6605a5948b13c4c5">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4bdf50219d686a6cbc0b3cc5365dc18e">gridfire::reaction::ReactionSet</a></li>
+<li>contains_reactant()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#afca3afba45a3db79980c8fe18c87c750">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a256998eddf292f744d51cdc3e178d4c2">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a98095e6536d9a6434c5955f4c169d505">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a65a12e5f6180873866cfaaf130fd1156">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ab28bf4f9417ecabcc8350bae449fedd5">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a256998eddf292f744d51cdc3e178d4c2">gridfire::reaction::ReactionSet</a></li>
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+<li>detailed_step_logging&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a895377662ff062bb83dd77226fa01c69">gridfire::solver::PointSolverContext</a></li>
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+<li>dt0&#160;:&#160;<a class="el" href="structgridfire_1_1_net_in.html#a4e556f7bb18f46654b3445476734076a">gridfire::NetIn</a></li>
+<li>dydt&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html#aad90bec88a31fce600c60c29835410b1">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
+<li>dydt_vector&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html#a4dce937771ebdb26002a79e37f975358">gridfire::engine::GraphEngine::PrecomputationKernelResults</a></li>
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+<li>EveryNthTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a69e5a3061926e1cd36fbd0a5285fa0a7">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a></li>
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+<li>evolve()&#160;:&#160;<a class="el" href="struct_g_f_grid_context.html#a79ccefa304bba5d0c82426f9e2817e16">GFGridContext</a>, <a class="el" href="struct_g_f_point_context.html#ac1ea5f9d1e909636228d66bb52e94889">GFPointContext</a></li>
+<li>excess_energy()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a0b30c49925823c87980b4fca17c8282e">gridfire::reaction::ReaclibReaction</a></li>
+<li>exportToCSV()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#adab81a7a56e2d9fd1ca46c20bf971912">gridfire::engine::GraphEngine</a></li>
+<li>exportToDot()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac5f6bbc54d65a974dce4ad407617779a">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0408236605abd9c1a9fcb3094a8ebf70">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>extend()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222">gridfire::reaction::ReactionSet</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+<li>ADFunRegistrationResult&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af5e973d248aea4af2baedd64a5a396f1">gridfire::engine::scratch::GraphEngineScratchPad</a></li>
+<li>Bounds&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a7002ebbef966f89b2426f5ea0df33329">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
+<li>Error&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a12f7a1fcb8bd6277f91b7ee08f267bd8">gridfire::engine::scratch::StateBlob</a></li>
+<li>JacobianMatrixState&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a19305dc4affde99bb84056c9eeda9f1e">gridfire::engine::GraphEngine</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+<li>FRONT&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a7002ebbef966f89b2426f5ea0df33329aa692ae3131928d57ddcd2408d6b44d71">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
+<li>MIDDLE&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a7002ebbef966f89b2426f5ea0df33329abb276a700ba6a5b912fa0bf0a668d735">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<li>FileDefinedEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a2ac3834f2d8b916db40fe71c0f070a00">gridfire::engine::FileDefinedEngineView</a></li>
+<li>finalizeActiveSet()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a28a8898cdde41290bec11f3a4dfd16ef">gridfire::engine::AdaptiveEngineView</a></li>
+<li>find()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a12058e121981294f447e69a467fd84cd">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
+<li>findReachableSpecies()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a9da9b3d6f02af5a7343d340e0418c642">gridfire::engine::AdaptiveEngineView</a></li>
+<li>flowRate&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html#a66eed32c2126788d9511dfee2404b9f8">gridfire::engine::AdaptiveEngineView::ReactionFlow</a></li>
+<li>flux_coupling_threshold&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a95836c7415ca6598185a612e0677ee89">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>for_sparse_jac()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html#a706c7a9a7c74333bb77a99c1ada8dc65">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html#a976a2ef2e58439429c1a6e94c27f4662">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
+<li>format()&#160;:&#160;<a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1_network_jacobian_01_4.html#a59d2a4484bd158d2242776b75cded831">std::formatter&lt; gridfire::engine::NetworkJacobian &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_01_4.html#a76d68d55b606384472d95bbc96dd0be6">std::formatter&lt; gridfire::engine::scratch::AbstractScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_01_4.html#a094a6e321f3e44a21898bfdd1ba8648b">std::formatter&lt; gridfire::engine::scratch::AdaptiveEngineViewScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.html#a471717c7e7e34060b86b111cf78dff25">std::formatter&lt; gridfire::engine::scratch::DefinedEngineViewScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_01_4.html#a0a1aa2aa1feb7216121b73e61cd6180a">std::formatter&lt; gridfire::engine::scratch::GraphEngineScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_01_4.html#af8c2ffc9e5e827316266cf7fabd45467">std::formatter&lt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_scratch_pad_type_01_4.html#a285526b36757df0a8b77ee07919a9d57">std::formatter&lt; gridfire::engine::scratch::ScratchPadType &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4.html#accacd00c3ee75e02fee48eb7a37cdbcf">std::formatter&lt; gridfire::engine::scratch::StateBlob &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1_net_in_01_4.html#ade68d16fc339d70874c8411ecd47cbb4">std::formatter&lt; gridfire::NetIn &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4.html#a0285b08b463c065477d40c9227770b34">std::formatter&lt; gridfire::NetOut &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1policy_1_1_network_policy_01_4.html#a80e3e81245585871e149d1de0b1718a9">std::formatter&lt; gridfire::policy::NetworkPolicy &gt;</a></li>
+<li>format_error()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1_debug_exception.html#a0eb41e70d1d06e45632e157507aec2c3">gridfire::exceptions::DebugException</a></li>
+<li>forward()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html#a9bd23c85ea5e8ad14a0175931852640d">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html#ab4f12e8da29d4d158fb0adf2db31b4bb">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
+<li>FRONT&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a7002ebbef966f89b2426f5ea0df33329aa692ae3131928d57ddcd2408d6b44d71">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
+<li>func_code&#160;:&#160;<a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html#a7f54bd3e068a61b4e90de8d8f4d7207a">gridfire::io::gen::PyFunctionDef</a></li>
+<li>func_name&#160;:&#160;<a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html#a795d0022f7c645fc443781dc6bf35121">gridfire::io::gen::PyFunctionDef</a></li>
 </ul>
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 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/functions_func.html b/docs/html/functions_func.html
index 714d63df..9be3ae13 100644
--- a/docs/html/functions_func.html
+++ b/docs/html/functions_func.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Members - Functions</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('functions_func.html',''); initResizable(); });
+$(function(){initNavTree('functions_func.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
@@ -95,22 +102,24 @@ $(document).ready(function(){initNavTree('functions_func.html',''); initResizabl
 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
 <h3><a id="index_a" name="index_a"></a>- a -</h3><ul>
-<li>abs_failure()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html#a5ae9ce66d4bbafd83145f8545a32d33a">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></li>
-<li>AdaptiveEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#aea8914f56e34445aacf0a5d0af073897">gridfire::engine::AdaptiveEngineView</a></li>
-<li>add_reaction()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1LogicalReaclibReaction.html#a69508797ca0793f6d3f58de4e0b97667">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#ad9dbc77e93467c95ebda908b53e9a9d1">gridfire::reaction::ReactionSet</a></li>
-<li>all_species()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html#a6e567323ca019eadcbb9dbb814ebeb0b">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#a445777acbbee2032d83a256181a90e3c">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html#aa13cd9097229fcc99128d9286b8f17e6">gridfire::reaction::Reaction</a></li>
-<li>analyzeTimescalePoolConnectivity()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html#a8d4153f520b486dbb262888e22b95896">gridfire::engine::MultiscalePartitioningEngineView</a></li>
-<li>AndTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1AndTrigger.html#a969738baf0bda97664715937d4bc403e">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a></li>
-<li>AtomicReverseRate()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine_1_1AtomicReverseRate.html#a29639c336e8a6786ec2edea98915c0a4">gridfire::engine::GraphEngine::AtomicReverseRate</a></li>
-<li>AtomicWeakRate()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction_1_1AtomicWeakRate.html#a46d76ca50ee00198a9f4a873c6ceb874">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
-<li>available_isotopes()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakRateInterpolator.html#a976f84b6f6e33b5f3dd733a771afd7ba">gridfire::rates::weak::WeakRateInterpolator</a></li>
+<li>abs_failure()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a21a3cc61c5fe0db9e859875b36bd1483">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></li>
+<li>accumulate_flows_serial()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ab5c4f7868ccd28fcf256e1e252c78517">gridfire::engine::GraphEngine</a></li>
+<li>AdaptiveEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aea8914f56e34445aacf0a5d0af073897">gridfire::engine::AdaptiveEngineView</a></li>
+<li>add_reaction()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#ad9dbc77e93467c95ebda908b53e9a9d1">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#a69508797ca0793f6d3f58de4e0b97667">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#ad9dbc77e93467c95ebda908b53e9a9d1">gridfire::reaction::ReactionSet</a></li>
+<li>addReaction()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a0dca83ce5226859b6b605889aca8ecc9">gridfire::engine::GraphEngine</a></li>
+<li>all_species()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#ace0b2bee91702e0ab97b6fc74999d6f0">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a6e567323ca019eadcbb9dbb814ebeb0b">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a445777acbbee2032d83a256181a90e3c">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#aa13cd9097229fcc99128d9286b8f17e6">gridfire::reaction::Reaction</a></li>
+<li>analyzeTimescalePoolConnectivity()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#afbf1e0c56ea1cd9b41aba49c9db692f5">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>AndTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a969738baf0bda97664715937d4bc403e">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a></li>
+<li>AtomicReverseRate()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html#a29639c336e8a6786ec2edea98915c0a4">gridfire::engine::GraphEngine::AtomicReverseRate</a></li>
+<li>AtomicWeakRate()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html#a46d76ca50ee00198a9f4a873c6ceb874">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
+<li>available_isotopes()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html#a976f84b6f6e33b5f3dd733a771afd7ba">gridfire::rates::weak::WeakRateInterpolator</a></li>
 </ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
 </div>
 </body>
diff --git a/docs/html/functions_func_b.html b/docs/html/functions_func_b.html
index 24092e5f..0ad50a1b 100644
--- a/docs/html/functions_func_b.html
+++ b/docs/html/functions_func_b.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Members - Functions</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
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 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
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 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
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+<li>begin()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a228f2a00f46a6ee01be887490a722613">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#a2317c6351bb1fc07ff0a27cd358b4f73">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#a1353d7d2208497b38799bf69f574c275">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a228f2a00f46a6ee01be887490a722613">gridfire::reaction::ReactionSet</a></li>
+<li>BoundaryFluxTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a48e6bada4d408933a29164f4e5258a65">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></li>
+<li>build_partition_function()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a5f38cd1549544854e60c2c7a847c0ea7">gridfire::policy::MainSequencePolicy</a></li>
+<li>buildConnectivityGraph()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a6d0f041d32f00a8bdce97f9400ddf56f">gridfire::engine::MultiscalePartitioningEngineView</a></li>
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-<li>CNOIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1CNOIChainPolicy.html#a7b428233b7cd85bac48c0b4906f990ce">gridfire::policy::CNOIChainPolicy</a></li>
-<li>CNOIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1CNOIIChainPolicy.html#aebcb36cb5cfbde4cf0e5b785c4b8cbd8">gridfire::policy::CNOIIChainPolicy</a></li>
-<li>CNOIIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1CNOIIIChainPolicy.html#af5ba73b9349e97fd1e2876ce9e9fac0b">gridfire::policy::CNOIIIChainPolicy</a></li>
-<li>CNOIVChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1CNOIVChainPolicy.html#a3a73e280dca833ff6517bef9b9193aa1">gridfire::policy::CNOIVChainPolicy</a></li>
-<li>collect()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a38191e2b3b219d348eba0109dce271c3">gridfire::engine::DefinedEngineView</a></li>
-<li>collectAtomicReverseRateAtomicBases()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a5fadd1bb2692e1527ce24295c77cfc72">gridfire::engine::GraphEngine</a></li>
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-<li>ConvergenceFailureTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html#a63010d8ba73689dda0c2228a1462aae2">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></li>
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+<li>calculateRHSAndEnergy()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a4c51bcc65f1bc6afdb9487546775ce79">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a297412202e82ab25b6fc0a8a27a433e7">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_engine.html#a71c9ed5e0810799cd6af1d8ffbc8a918">gridfire::engine::Engine</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a474ba2ca2d24cb90ee73af042993dd14">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#add1058c32fbd02f5583cfda4cc60985c">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a1331900141bb079e634151abdea075dc">PyDynamicEngine</a>, <a class="el" href="class_py_engine.html#a63a2605b8d742d284924db397338da0b">PyEngine</a></li>
+<li>calculateScreeningFactors()&#160;:&#160;<a class="el" href="classgridfire_1_1screening_1_1_bare_screening_model.html#ad252ce1de82401bab24747aabf0c8a3a">gridfire::screening::BareScreeningModel</a>, <a class="el" href="classgridfire_1_1screening_1_1_intermediate_screening_model.html#a86a218ce82306ed582296cbeb3de0250">gridfire::screening::IntermediateScreeningModel</a>, <a class="el" href="classgridfire_1_1screening_1_1_screening_model.html#ab08c4490f9da18254a7c6f29be1f62ce">gridfire::screening::ScreeningModel</a>, <a class="el" href="classgridfire_1_1screening_1_1_weak_screening_model.html#a6a215d082b0d05126fb2b19fd1983446">gridfire::screening::WeakScreeningModel</a>, <a class="el" href="class_py_screening.html#aa67b5f0528006d9c742033b8c5ab3a05">PyScreening</a></li>
+<li>chapter()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#abe189c43e4d509d9d05dd205861ceddc">gridfire::reaction::ReaclibReaction</a></li>
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+<li>check_status()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#ac3263f792de714d5ffed31bfac17d808">gridfire::policy::MainSequencePolicy</a></li>
+<li>clear()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#aa8e0d65aafc6e0320690b4906e1bf300">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aa8e0d65aafc6e0320690b4906e1bf300">gridfire::reaction::ReactionSet</a></li>
+<li>clear_callback()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a2b11556cc7da39e1b1b4b86b77766abb">gridfire::solver::GridSolverContext</a></li>
+<li>clear_context()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a0b28b5c16fe1892c8f5ea14c7d2f153f">gridfire::solver::PointSolverContext</a></li>
+<li>clone()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a25d2fd5dc372c43afb1ffeafe08aa0fa">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a588a8c19970463d97f5aa333fcd312dc">gridfire::engine::Reaction</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">gridfire::engine::scratch::AbstractScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#ae2cd00926412c7ef78dbfb4647cc2495">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#ae6c007066aee6807530c8611e717024d">gridfire::engine::scratch::DefinedEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aa5ececd1fb07a0aabb662c42dcb824b5">gridfire::engine::scratch::GraphEngineScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a7dbce2e9a2f940cbde8888aa67f5f3aa">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a>, <a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#a7b000d55c7d1f489e54a57f7f4e3808a">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#ade2b0f92a3d9b74968166793466a11e4">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#a677a90f992fd56b8718e36655c33ce6d">gridfire::partition::PartitionFunction</a>, <a class="el" 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+<li>CNOIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html#aebcb36cb5cfbde4cf0e5b785c4b8cbd8">gridfire::policy::CNOIIChainPolicy</a></li>
+<li>CNOIIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy.html#af5ba73b9349e97fd1e2876ce9e9fac0b">gridfire::policy::CNOIIIChainPolicy</a></li>
+<li>CNOIVChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html#a3a73e280dca833ff6517bef9b9193aa1">gridfire::policy::CNOIVChainPolicy</a></li>
+<li>collect()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a59680b2c95412edc7d9cda939282f2e1">gridfire::engine::DefinedEngineView</a></li>
+<li>collectAtomicReverseRateAtomicBases()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a5fadd1bb2692e1527ce24295c77cfc72">gridfire::engine::GraphEngine</a></li>
+<li>collectComposition()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a7d4d16693db712b1823377ad460f5144">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a4002e188995b6c203dc391f381432e5b">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a078a16d21f2d7de9636c5bc6a05ddfec">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a1c977a772eedae1cceeb6b50d984fde4">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a5c7669454b986ed20db8387e5724b2b0">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a60445db14a6bfd0eeef7c0a62d458a60">PyDynamicEngine</a></li>
+<li>collectNetworkSpecies()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a8f29c77e777fdc6517f2c7778537ba6f">gridfire::engine::GraphEngine</a></li>
+<li>Column()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1_column.html#a7d7e4f4cf6f8e03725afeb9f664321b8">gridfire::utils::Column&lt; T &gt;</a></li>
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+<li>constructPrimingReactionSet()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ac407e948552378165474f0308d5fcd5f">gridfire::engine::NetworkPrimingEngineView</a></li>
+<li>constructReactionIndexMap()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af058b09a44f30332eece13f0d4ce9d9d">gridfire::engine::DefinedEngineView</a></li>
+<li>constructSpeciesIndexMap()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#a85db72e3c0a4ce59345b6b92695a5d12">gridfire::engine::DefinedEngineView</a></li>
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+<li>contains_species()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a5b872a8519740a6d06cfaed03784826a">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a5b872a8519740a6d06cfaed03784826a">gridfire::reaction::ReactionSet</a></li>
+<li>containsAlgebraic()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#a553a39a2a8e6cea1d6f849cb7097fee6">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
+<li>containsSeed()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#aa65229a4974b74ce4fc3f7c0544fbe91">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
+<li>ConvergenceFailureTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a63010d8ba73689dda0c2228a1462aae2">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></li>
+<li>countProductOccurrences()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#aa786369c0aff9b7c8fffbfb632cdc61f">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#aeba08ed8204fc4999dc0324076d67d2a">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#abe3ab72b2577cbe0f87436b063ce812c">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a62fc82b29bacc10cfbceaa1571b14525">gridfire::reaction::Reaction</a></li>
+<li>countReactantOccurrences()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a3e1e3dbac9fc81799b5284a57e9bd3ec">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#acfc3740ed0aa72986b2c1bc2666974d6">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a79928f9c52822202b3156bd145e35ad8">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a036773e4dc917facbf2308dbbe853633">gridfire::reaction::Reaction</a></li>
+<li>cullReactionsByFlow()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aebb0d838af29b74b86e708e614698074">gridfire::engine::AdaptiveEngineView</a></li>
+<li>current_mean()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a3d8d9eafff17ea6a283afbc7e8b450bb">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></li>
+<li>cvode_error_handler()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a153f72c17a795f220ac6f674d2ad4ab6">gridfire::solver::PointSolver</a></li>
+<li>cvode_jac_wrapper()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#ab0eb347e114510de0dfeb9d86fb40c9d">gridfire::solver::PointSolver</a></li>
+<li>cvode_rhs_wrapper()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#acbfc90a7439f7a8a377d98571bade26b">gridfire::solver::PointSolver</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/functions_func_d.html b/docs/html/functions_func_d.html
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+<meta name="generator" content="Doxygen 1.13.2"/>
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 <title>GridFire: Class Members - Functions</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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 </table>
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+<!-- Generated by Doxygen 1.13.2 -->
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+<li>data()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#adb5643398b6f5fbf0ab8f09580b93402">gridfire::engine::NetworkJacobian</a></li>
+<li>DebugException()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1_debug_exception.html#a4c9767a6ef00a5b185ee121f79775b0c">gridfire::exceptions::DebugException</a></li>
+<li>DefinedEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#ada2f326789dc8ae8305617c8d700ae05">gridfire::engine::DefinedEngineView</a></li>
+<li>describe()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a5307efe7f090f77b17d78a6d789d929b">gridfire::solver::PointSolverTimestepContext</a>, <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html#a58b7962bb4196b5f4999576b151250da">gridfire::solver::TimestepContextBase</a>, <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a2dcd635c6bdbcfe517adca6e2bd5c408">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#aab88715f3c94437ca7f3fcb1698c69de">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ad8166350329db3e1f50954afbb311a35">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#accb56630df2f57400467d315c61dede6">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#ab82a259841ccffe77144b2d82501d43f">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa2bb19e4a1e24f6fd7f86d0c80ebbec3">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#ad0dd92f9da6c291c3bd57c0983940035">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a0f412b8f788ab7990e353d62ab7d9a16">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a8ba5a942bb61347851030d1eb6bbaa74">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a402cdd062e9479abbcca02e3d94e528f">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="class_py_timestep_context_base.html#af2c7a12c4c9244a9e21e88c3d9451c3a">PyTimestepContextBase</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+<li>empty()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a7cfce57192993e71c8437a64030caa2d">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a7cfce57192993e71c8437a64030caa2d">gridfire::reaction::ReactionSet</a></li>
+<li>end()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#abae9fbc4b4306479a6cd3173ac628987">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#aaa71cb8b9c72af7047c4ae54b8c33915">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#aefaf6c4c32ae54a2882da0e031632a74">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#abae9fbc4b4306479a6cd3173ac628987">gridfire::reaction::ReactionSet</a></li>
+<li>enroll()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">gridfire::engine::scratch::StateBlob</a></li>
+<li>error_to_string()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aad299d86d00010692f4b787fc80ae33b">gridfire::engine::scratch::StateBlob</a></li>
+<li>evaluate()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#a8d6d278fcb5b8478b0e27535f877ee2b">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#af16da0015489307eb64639efbafbbdd5">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#a08ee79b7d8723b4e00ee1fc9cdfbe817">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#aebe49d06b50a18ea4484ff15cb301681">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="classgridfire_1_1solver_1_1_grid_solver.html#aba2dba489f9fa8e644606fbf2b913fca">gridfire::solver::GridSolver</a>, <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#ab9f86bfb1e576a2a520bee7b205bf0d1">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a>, <a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a56440c3329be6e245274e612a6048b92">gridfire::solver::PointSolver</a>, <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#abc4e0a88955a1bbac7886132240ca02d">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a>, <a class="el" href="class_py_multi_zone_dynamic_network_solver.html#aad0d16a83dcaee1da199e271f0cf10f0">PyMultiZoneDynamicNetworkSolver</a>, <a class="el" href="class_py_partition_function.html#a83aca0bc261734b7d3df8269f730c69b">PyPartitionFunction</a>, <a class="el" href="class_py_single_zone_dynamic_network_solver.html#a59893f7cf809d922b6d113ed2cf96881">PySingleZoneDynamicNetworkSolver</a></li>
+<li>evaluateDerivative()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#ac8900afaa5edd24fcb8eaf19e7379183">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#a0eff10c7b134d9d4081ad72bbc785c5b">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#a14009bdaca47f3eddf2c6c023845db5a">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#aaa1e11579b44a88c5f18943cc303c4b4">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="class_py_partition_function.html#a260df9689bf698970ebf5104977a3dcf">PyPartitionFunction</a></li>
+<li>EveryNthTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a69e5a3061926e1cd36fbd0a5285fa0a7">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a></li>
+<li>evolve()&#160;:&#160;<a class="el" href="struct_g_f_grid_context.html#a79ccefa304bba5d0c82426f9e2817e16">GFGridContext</a>, <a class="el" href="struct_g_f_point_context.html#ac1ea5f9d1e909636228d66bb52e94889">GFPointContext</a></li>
+<li>excess_energy()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a0b30c49925823c87980b4fca17c8282e">gridfire::reaction::ReaclibReaction</a></li>
+<li>exportToCSV()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#adab81a7a56e2d9fd1ca46c20bf971912">gridfire::engine::GraphEngine</a></li>
+<li>exportToDot()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac5f6bbc54d65a974dce4ad407617779a">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a0408236605abd9c1a9fcb3094a8ebf70">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>extend()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a6a4836776f5dd00158d2336e5bcc3222">gridfire::reaction::ReactionSet</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
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@@ -95,21 +102,21 @@ $(document).ready(function(){initNavTree('functions_func_f.html',''); initResiza
 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
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-<li>finalizeActiveSet()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#aab32396ad3ab20960bfd505bb6128ff0">gridfire::engine::AdaptiveEngineView</a></li>
-<li>find()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1RauscherThielemannPartitionFunction.html#a12058e121981294f447e69a467fd84cd">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
-<li>findReachableSpecies()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#a1bc1c462fe57cc30af5553c353e43db8">gridfire::engine::AdaptiveEngineView</a></li>
-<li>for_sparse_jac()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine_1_1AtomicReverseRate.html#a706c7a9a7c74333bb77a99c1ada8dc65">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction_1_1AtomicWeakRate.html#a976a2ef2e58439429c1a6e94c27f4662">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
-<li>format()&#160;:&#160;<a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1NetworkJacobian_01_4.html#a59d2a4484bd158d2242776b75cded831">std::formatter&lt; gridfire::engine::NetworkJacobian &gt;</a></li>
-<li>format_error()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1DebugException.html#a0eb41e70d1d06e45632e157507aec2c3">gridfire::exceptions::DebugException</a></li>
-<li>forward()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine_1_1AtomicReverseRate.html#a9bd23c85ea5e8ad14a0175931852640d">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction_1_1AtomicWeakRate.html#ab4f12e8da29d4d158fb0adf2db31b4bb">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
+<li>FileDefinedEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_file_defined_engine_view.html#a2ac3834f2d8b916db40fe71c0f070a00">gridfire::engine::FileDefinedEngineView</a></li>
+<li>finalizeActiveSet()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a28a8898cdde41290bec11f3a4dfd16ef">gridfire::engine::AdaptiveEngineView</a></li>
+<li>find()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a12058e121981294f447e69a467fd84cd">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
+<li>findReachableSpecies()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a9da9b3d6f02af5a7343d340e0418c642">gridfire::engine::AdaptiveEngineView</a></li>
+<li>for_sparse_jac()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html#a706c7a9a7c74333bb77a99c1ada8dc65">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html#a976a2ef2e58439429c1a6e94c27f4662">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
+<li>format()&#160;:&#160;<a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1_network_jacobian_01_4.html#a59d2a4484bd158d2242776b75cded831">std::formatter&lt; gridfire::engine::NetworkJacobian &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_01_4.html#a76d68d55b606384472d95bbc96dd0be6">std::formatter&lt; gridfire::engine::scratch::AbstractScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_01_4.html#a094a6e321f3e44a21898bfdd1ba8648b">std::formatter&lt; gridfire::engine::scratch::AdaptiveEngineViewScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.html#a471717c7e7e34060b86b111cf78dff25">std::formatter&lt; gridfire::engine::scratch::DefinedEngineViewScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_01_4.html#a0a1aa2aa1feb7216121b73e61cd6180a">std::formatter&lt; gridfire::engine::scratch::GraphEngineScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_01_4.html#af8c2ffc9e5e827316266cf7fabd45467">std::formatter&lt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_scratch_pad_type_01_4.html#a285526b36757df0a8b77ee07919a9d57">std::formatter&lt; gridfire::engine::scratch::ScratchPadType &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4.html#accacd00c3ee75e02fee48eb7a37cdbcf">std::formatter&lt; gridfire::engine::scratch::StateBlob &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1_net_in_01_4.html#ade68d16fc339d70874c8411ecd47cbb4">std::formatter&lt; gridfire::NetIn &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4.html#a0285b08b463c065477d40c9227770b34">std::formatter&lt; gridfire::NetOut &gt;</a>, <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1policy_1_1_network_policy_01_4.html#a80e3e81245585871e149d1de0b1718a9">std::formatter&lt; gridfire::policy::NetworkPolicy &gt;</a></li>
+<li>format_error()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1_debug_exception.html#a0eb41e70d1d06e45632e157507aec2c3">gridfire::exceptions::DebugException</a></li>
+<li>forward()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html#a9bd23c85ea5e8ad14a0175931852640d">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html#ab4f12e8da29d4d158fb0adf2db31b4bb">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
 </ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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@@ -95,75 +102,91 @@ $(document).ready(function(){initNavTree('functions_func_g.html',''); initResiza
 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
 <h3><a id="index_g" name="index_g"></a>- g -</h3><ul>
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+<li>log_diagnostics()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a616b818685cc51e0c1926a46435cbb68">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
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+<li>log_time()&#160;:&#160;<a class="el" href="class_solver_plugin_interface.html#a493a30c0ae4b2e1a89b7d03c02c0041c">SolverPluginInterface</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<li>MultiZoneNetworkSolver()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html#add7bc564ea0cf2490d856f7e47b4813d">gridfire::solver::MultiZoneNetworkSolver&lt; EngineT &gt;</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<script type="text/javascript">
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@@ -66,7 +73,7 @@ $(function() {
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@@ -95,25 +102,24 @@ $(document).ready(function(){initNavTree('functions_func_n.html',''); initResiza
 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
 <h3><a id="index_n" name="index_n"></a>- n -</h3><ul>
-<li>name()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1CNOChainPolicy.html#a66511726b37f0e114cba2dd15db42440">gridfire::policy::CNOChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1CNOIChainPolicy.html#ad3d4721e3046d792c0aa8e5c6c99aa2d">gridfire::policy::CNOIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1CNOIIChainPolicy.html#a6bf1057d28cb37db4f9ffde9cb3815ed">gridfire::policy::CNOIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1CNOIIIChainPolicy.html#a96abfb16ec2b692c070da139444435e3">gridfire::policy::CNOIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1CNOIVChainPolicy.html#a101a884a8ead5d961fd5d43a0dbffde8">gridfire::policy::CNOIVChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1HotCNOChainPolicy.html#a95e2f3c1a32b3f2dd5d5601c2a81f42f">gridfire::policy::HotCNOChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1HotCNOIChainPolicy.html#a13b2857d96e42f162888dcc294a27b9b">gridfire::policy::HotCNOIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1HotCNOIIChainPolicy.html#a262a18dafbc68db925beefb14c43668f">gridfire::policy::HotCNOIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1HotCNOIIIChainPolicy.html#a59168da23f2d6b4d8667f5118153b514">gridfire::policy::HotCNOIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1MainSequencePolicy.html#a6520ddfead2ba2700e2b1329774b4ff6">gridfire::policy::MainSequencePolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1MainSequenceReactionChainPolicy.html#a7411e9a885d7ebb79590d8e1c5834881">gridfire::policy::MainSequenceReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1MultiReactionChainPolicy.html#ac21f837d0d452d32588451f48d5482e6">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1NetworkPolicy.html#aa59c1baf7077a5d35d45ff753b32a565">gridfire::policy::NetworkPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1ProtonProtonChainPolicy.html#a2e818c9a269bc859b01985fea8423ac0">gridfire::policy::ProtonProtonChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIChainPolicy.html#ab9542fd71e87159216cdd51501b6d1d3">gridfire::policy::ProtonProtonIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIIChainPolicy.html#a2782c6abea3596cf566a246239b96f80">gridfire::policy::ProtonProtonIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIIIChainPolicy.html#a06d103e970b19c9a40cbae8d52ef0d0c">gridfire::policy::ProtonProtonIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1ReactionChainPolicy.html#a41758d921a2d7e83f446aa4fec00d598">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1TripleAlphaChainPolicy.html#a2d6543b9fa7f96b8b21d7e7545f9a22d">gridfire::policy::TripleAlphaChainPolicy</a>, <a class="el" href="classgridfire_1_1trigger_1_1AndTrigger.html#ab78539e5cd88194ab9e98434793eae3f">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1EveryNthTrigger.html#a4a834d24286f9204995bf78fb69f35dc">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1NotTrigger.html#acc3bd2938f7746997fb1d255681d8b20">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html#a062af4f567dc48c088f1fcfb64cc79ec">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html#a92a57cea3b58bd7948c3c3fb4f75619b">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html#a594893c029f044be3119118808470f7a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html#a87fc9fe6bd8762f148c858452ec30043">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1TimestepCollapseTrigger.html#a290e5643eea08726d2fd44a1cd5617d0">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1Trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classPyNetworkPolicy.html#ac2c1ef3897e6491d5ab03e7342075245">PyNetworkPolicy</a>, <a class="el" href="classPyReactionChainPolicy.html#af148bf87fea9ebe61de745913a2fd504">PyReactionChainPolicy</a></li>
-<li>nans()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#a9292384722bcb0245acab9affcdb8c6d">gridfire::engine::NetworkJacobian</a></li>
-<li>ncols()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1Table.html#afd3ddec237e460916d2245b3f52c68ad">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1TableBase.html#af1a64a10395240ae527c33de5555e91b">gridfire::utils::TableBase</a></li>
-<li>NetworkJacobian()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#aee558bd90f26fdb6172a04fb63d2572e">gridfire::engine::NetworkJacobian</a></li>
-<li>NetworkPrimingEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkPrimingEngineView.html#ad4eec8af1ab1f918fd4e92fac47adaf4">gridfire::engine::NetworkPrimingEngineView</a></li>
-<li>NetworkSolverStrategy()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1NetworkSolverStrategy.html#a01cbbec0eb5c3a60f50da38cdaf66505">gridfire::solver::NetworkSolverStrategy&lt; EngineT &gt;</a></li>
-<li>nnz()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#a2016fcfe27363650817b5be1ce6aaa32">gridfire::engine::NetworkJacobian</a></li>
-<li>NotTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1NotTrigger.html#a4828599aae5ff37f4c82e51fe192bed3">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a></li>
-<li>nrows()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1Table.html#adc88ced7876f48aada9bc3cf73163567">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1TableBase.html#a271f10ae6349dc5a6e37f27f1d580752">gridfire::utils::TableBase</a></li>
-<li>num_species()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html#a1210917ca1727ea474bb606cf8279edb">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#a9205126955ad38f56e8aca3112bc150a">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html#ae2a1b0395ac127c792a8049cd0bcc249">gridfire::reaction::Reaction</a></li>
-<li>numMisses()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1AndTrigger.html#addfd61f8cb234881f535fb8f4d618d74">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1EveryNthTrigger.html#ae7776f4a526db3245e64a74a3b0172d3">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1NotTrigger.html#a2f9b0d6a6ac54f6371c5a208c06826ea">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html#a0b3a7f45604dbb27e832d9559dd20997">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html#aa26bf911c73b7f2ec343d473caf13718">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html#a0e1ad148f9f3232992a4b16e440c249a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html#a273eb8a3e80d1235d2b3f252e55c5b50">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1TimestepCollapseTrigger.html#a94bb1de08a5ff55e1874f595f8c8965c">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1Trigger.html#a81848e5af844795d879b6d885a2701d7">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
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+<li>name()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_c_n_o_chain_policy.html#a66511726b37f0e114cba2dd15db42440">gridfire::policy::CNOChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_chain_policy.html#ad3d4721e3046d792c0aa8e5c6c99aa2d">gridfire::policy::CNOIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html#a6bf1057d28cb37db4f9ffde9cb3815ed">gridfire::policy::CNOIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy.html#a96abfb16ec2b692c070da139444435e3">gridfire::policy::CNOIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html#a101a884a8ead5d961fd5d43a0dbffde8">gridfire::policy::CNOIVChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_chain_policy.html#a95e2f3c1a32b3f2dd5d5601c2a81f42f">gridfire::policy::HotCNOChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html#a13b2857d96e42f162888dcc294a27b9b">gridfire::policy::HotCNOIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html#a262a18dafbc68db925beefb14c43668f">gridfire::policy::HotCNOIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html#a59168da23f2d6b4d8667f5118153b514">gridfire::policy::HotCNOIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html#a6520ddfead2ba2700e2b1329774b4ff6">gridfire::policy::MainSequencePolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html#a7411e9a885d7ebb79590d8e1c5834881">gridfire::policy::MainSequenceReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#ac21f837d0d452d32588451f48d5482e6">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html#aa59c1baf7077a5d35d45ff753b32a565">gridfire::policy::NetworkPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_proton_proton_chain_policy.html#a2e818c9a269bc859b01985fea8423ac0">gridfire::policy::ProtonProtonChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html#ab9542fd71e87159216cdd51501b6d1d3">gridfire::policy::ProtonProtonIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html#a2782c6abea3596cf566a246239b96f80">gridfire::policy::ProtonProtonIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html#a06d103e970b19c9a40cbae8d52ef0d0c">gridfire::policy::ProtonProtonIIIChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html#a41758d921a2d7e83f446aa4fec00d598">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html#a2d6543b9fa7f96b8b21d7e7545f9a22d">gridfire::policy::TripleAlphaChainPolicy</a>, <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#ab78539e5cd88194ab9e98434793eae3f">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a4a834d24286f9204995bf78fb69f35dc">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#acc3bd2938f7746997fb1d255681d8b20">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a062af4f567dc48c088f1fcfb64cc79ec">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a581983de89c5609110628bd06bf7fb85">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a92a57cea3b58bd7948c3c3fb4f75619b">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a594893c029f044be3119118808470f7a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a87fc9fe6bd8762f148c858452ec30043">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a290e5643eea08726d2fd44a1cd5617d0">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a3e5b017147f22ca0733733cd39e334b7">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="class_py_network_policy.html#ac2c1ef3897e6491d5ab03e7342075245">PyNetworkPolicy</a>, <a class="el" href="class_py_reaction_chain_policy.html#af148bf87fea9ebe61de745913a2fd504">PyReactionChainPolicy</a></li>
+<li>nans()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a9292384722bcb0245acab9affcdb8c6d">gridfire::engine::NetworkJacobian</a></li>
+<li>ncols()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1_table.html#afd3ddec237e460916d2245b3f52c68ad">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1_table_base.html#af1a64a10395240ae527c33de5555e91b">gridfire::utils::TableBase</a></li>
+<li>NetworkJacobian()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#aee558bd90f26fdb6172a04fb63d2572e">gridfire::engine::NetworkJacobian</a></li>
+<li>NetworkPrimingEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#ab51d5a6071da28ab19a42202a08b7b00">gridfire::engine::NetworkPrimingEngineView</a></li>
+<li>nnz()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a2016fcfe27363650817b5be1ce6aaa32">gridfire::engine::NetworkJacobian</a></li>
+<li>NotTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a4828599aae5ff37f4c82e51fe192bed3">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a></li>
+<li>nrows()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1_table.html#adc88ced7876f48aada9bc3cf73163567">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1_table_base.html#a271f10ae6349dc5a6e37f27f1d580752">gridfire::utils::TableBase</a></li>
+<li>num_species()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a348aae35a6c82194ef5387278419e0e6">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a1210917ca1727ea474bb606cf8279edb">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a9205126955ad38f56e8aca3112bc150a">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ae2a1b0395ac127c792a8049cd0bcc249">gridfire::reaction::Reaction</a></li>
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+<li>numTriggers()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#afffb4281569963183d7db3ed1568eb3a">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a7e5568c9d7799b7f80ad0d3efe2cd143">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#ae2d27d72af9e1fbf711a58e4583b43a3">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#afc7d3eae8306ee383d76997ac3803327">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a098827751aecb05f416c09782910cd91">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#aa7cc311316539b2d348422ba907dc64e">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a32980aaf6d9c7632c024b4b74b1d9e70">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a34d285584ea96f71b99eefad8c738296">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#ad2a7c2567b100f97a024f65818ecefed">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a4ea3abfb76a09c4f55ad05d73a2cf12d">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/functions_func_o.html b/docs/html/functions_func_o.html
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+<meta name="generator" content="Doxygen 1.13.2"/>
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 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -95,22 +102,22 @@ $(document).ready(function(){initNavTree('functions_func_o.html',''); initResiza
 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
 <h3><a id="index_o" name="index_o"></a>- o -</h3><ul>
-<li>OffDiagonalTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html#a6dc334b85ffb822880c6740dc457ea52">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></li>
-<li>operator!=()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSEGroup.html#a5ec476b65fcedc5e4eb603a18037bf25">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a>, <a class="el" href="classgridfire_1_1policy_1_1MultiReactionChainPolicy.html#aa36844fe4417617175d31124e541da50">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1ReactionChainPolicy.html#ac19e354a8bcd28f60783b70d8a761030">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1TemperatureDependentChainPolicy.html#a264dc45c3410ab3ec49a340633aa5950">gridfire::policy::TemperatureDependentChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#a8b6008e0f629329bfc62256f4f081b77">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#a529189f464aebc6b5ac5c717f70e14b8">gridfire::reaction::ReactionSet</a>, <a class="el" href="classPyReactionChainPolicy.html#a8e3c5cdd4c1901bedf93168868a759a9">PyReactionChainPolicy</a></li>
-<li>operator()()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#a6aef41de3c48ac77ae991ca427ce46a9">gridfire::engine::NetworkJacobian</a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1TableAxes_01_4.html#abab92065d884b95cdddcc2f8f6fdd490">std::hash&lt; gridfire::rates::weak::TableAxes &gt;</a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1Reaction_01_4.html#a48224b63a80690e4f0620f1312be5dd9">std::hash&lt; gridfire::reaction::Reaction &gt;</a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1ReactionSet_01_4.html#a32b976b3e3e4e0403c1295f9b467e921">std::hash&lt; gridfire::reaction::ReactionSet &gt;</a></li>
-<li>operator&lt;()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSEGroup.html#ac9f99ea2754b419d030e92c314fba4ed">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
-<li>operator=()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html#a338cd55e34af1286f0f4593b04be7508">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a>, <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#ac5372d721127646e75c0f177661566f9">gridfire::engine::NetworkJacobian</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#aac890bf7fdf689890d765ff67489520a">gridfire::reaction::ReactionSet</a>, <a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#af500df838024c82724eaf7fe1cb9b8e8">gridfire::solver::CVODESolverStrategy</a></li>
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-<li>operator[]()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#a4057f74ae647b691f4f61f150553c52b">gridfire::reaction::ReactionSet</a>, <a class="el" href="classgridfire_1_1utils_1_1Table.html#a405477a1b9ecf0f1dc84ec102cdec7b3">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1TableBase.html#a33d1f279cc02a4edb66e846bb7b10077">gridfire::utils::TableBase</a></li>
-<li>OrTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html#aaf4f8a090bdd10eeba0b7849fa8ed888">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a></li>
+<li>OffDiagonalTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a6dc334b85ffb822880c6740dc457ea52">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a></li>
+<li>operator!=()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#a5ec476b65fcedc5e4eb603a18037bf25">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#aa36844fe4417617175d31124e541da50">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html#ac19e354a8bcd28f60783b70d8a761030">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html#a264dc45c3410ab3ec49a340633aa5950">gridfire::policy::TemperatureDependentChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8b6008e0f629329bfc62256f4f081b77">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8">gridfire::reaction::ReactionSet</a>, <a class="el" href="class_py_reaction_chain_policy.html#a8e3c5cdd4c1901bedf93168868a759a9">PyReactionChainPolicy</a></li>
+<li>operator()()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a6aef41de3c48ac77ae991ca427ce46a9">gridfire::engine::NetworkJacobian</a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1_table_axes_01_4.html#abab92065d884b95cdddcc2f8f6fdd490">std::hash&lt; gridfire::rates::weak::TableAxes &gt;</a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html#a48224b63a80690e4f0620f1312be5dd9">std::hash&lt; gridfire::reaction::Reaction &gt;</a>, <a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html#a32b976b3e3e4e0403c1295f9b467e921">std::hash&lt; gridfire::reaction::ReactionSet &gt;</a></li>
+<li>operator&lt;()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#ac9f99ea2754b419d030e92c314fba4ed">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
+<li>operator=()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a338cd55e34af1286f0f4593b04be7508">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a>, <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#ac5372d721127646e75c0f177661566f9">gridfire::engine::NetworkJacobian</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#aac890bf7fdf689890d765ff67489520a">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aac890bf7fdf689890d765ff67489520a">gridfire::reaction::ReactionSet</a></li>
+<li>operator==()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#a846d372046454aa0ff97a4c83d85b96d">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a4e572e823a80b905e7d002b612123135">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#abc3ed7c255b3e6c06e292aee8ef7f46d">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html#a30420a3881779c822ab06c0405ea7b28">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html#add9c0230ad7c3e6e2cb182bdb4849c52">gridfire::policy::TemperatureDependentChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae7c930525db447e39b4de18fbc1251a8">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4e572e823a80b905e7d002b612123135">gridfire::reaction::ReactionSet</a>, <a class="el" href="class_py_reaction_chain_policy.html#ad6671a30c99ad7a80edd60bd43a8a233">PyReactionChainPolicy</a></li>
+<li>operator&gt;()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#adc1710fde415de7a337dbec664b16e45">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
+<li>operator[]()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">gridfire::reaction::ReactionSet</a>, <a class="el" href="classgridfire_1_1utils_1_1_table.html#a405477a1b9ecf0f1dc84ec102cdec7b3">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1_table_base.html#a33d1f279cc02a4edb66e846bb7b10077">gridfire::utils::TableBase</a></li>
+<li>OrTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#aaf4f8a090bdd10eeba0b7849fa8ed888">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a></li>
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 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<li>peName()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#af775f97f4d5e144e33bc6e0ba58a5851">gridfire::reaction::ReaclibReaction</a></li>
+<li>PointSolver()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_point_solver.html#a2f6ca4d9a525746c4e037bc3df66096c">gridfire::solver::PointSolver</a></li>
+<li>PointSolverContext()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a34c212780f29247b2d18260ed46177d1">gridfire::solver::PointSolverContext</a></li>
+<li>PointSolverTimestepContext()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a0493540df76c61ebb2f58214327d3419">gridfire::solver::PointSolverTimestepContext</a></li>
+<li>populateReactionIDMap()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a6ccfb1813ce5b5c9568434f47e06726a">gridfire::engine::GraphEngine</a></li>
+<li>populateSpeciesToIndexMap()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a7e5c8d9b996e5bc7fc130d34dd196a4b">gridfire::engine::GraphEngine</a></li>
+<li>precomputeNetwork()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac7814b9922c7fee4c5a2649127dcdadc">gridfire::engine::GraphEngine</a></li>
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+<li>product_species()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#ac2306d841bad605b7c9ae104397cec0f">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a5c60feacb0ac48b35323d9f688315316">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a67c8fa4d5929c7a8cbca9b3d9dd2b704">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a0d16572ae2b664374d32ee6c4e22123a">gridfire::reaction::Reaction</a></li>
+<li>products()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#ac2918935929030e8d218dc8d107a78f9">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#aed0ea28ed3ba96a9f86aa9db947ec01c">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a5f563b99bb550d5bafa2a989502de019">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a3d7451045d8df41ea98b5e419e0e5ab0">gridfire::reaction::Reaction</a></li>
+<li>project()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#aa7b6561da6dd8513fef5c8c03737d433">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html#af52e0ce2ce80f08642c9a6dbf0adc929">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html#a260d36cc1e14ca8eda0309745e9134d9">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a58221a92813e13e43de48525980301d4">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a063c097e6afdadabbb79fabd61b21d0b">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#abe31184ce7e63f7428b4a31ab39e7a8d">PyDynamicEngine</a></li>
+<li>ProtonProtonChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_proton_proton_chain_policy.html#a0700dc96acfae24b242e5556a1bcbf26">gridfire::policy::ProtonProtonChainPolicy</a></li>
+<li>ProtonProtonIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html#a2721f00e9edefeb3d4bfc02a37777a47">gridfire::policy::ProtonProtonIChainPolicy</a></li>
+<li>ProtonProtonIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html#a1b8c1ebf376a8ddcafb89d6cda5d5989">gridfire::policy::ProtonProtonIIChainPolicy</a></li>
+<li>ProtonProtonIIIChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html#a80008d679d5084e6990da37b8e5784ac">gridfire::policy::ProtonProtonIIIChainPolicy</a></li>
+<li>pruneValidatedGroups()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a32e4bc6799cc14baccf341f07da0e6b6">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>PyMultiZoneDynamicNetworkSolver()&#160;:&#160;<a class="el" href="class_py_multi_zone_dynamic_network_solver.html#ad8cafdd48eb28f9087363de26b8939de">PyMultiZoneDynamicNetworkSolver</a></li>
+<li>PySingleZoneDynamicNetworkSolver()&#160;:&#160;<a class="el" href="class_py_single_zone_dynamic_network_solver.html#adb107930a92cf0dfd9f5ef08173b4a63">PySingleZoneDynamicNetworkSolver</a></li>
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 </div><!-- contents -->
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/functions_func_q.html b/docs/html/functions_func_q.html
index 4c8fb9ba..43707017 100644
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 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Members - Functions</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
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 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
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+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
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+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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@@ -66,7 +73,7 @@ $(function() {
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+$(function(){initNavTree('functions_func_q.html',''); initResizable(true); });
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-<li>qValue()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html#afedb724bf9f1c8fc91d853f2bedb10cb">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#ae47931948f12816eb890c0db4fff4d68">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html#a7e06936f9e8bb74e68eaa10e708e5d3c">gridfire::reaction::Reaction</a></li>
+<li>QSESolver()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a953520d6b705533fbdea699a50e31d54">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>qValue()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a11c714febaf818f1d4d6c19a064d707e">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#afedb724bf9f1c8fc91d853f2bedb10cb">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae47931948f12816eb890c0db4fff4d68">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a7e06936f9e8bb74e68eaa10e708e5d3c">gridfire::reaction::Reaction</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/functions_func_r.html b/docs/html/functions_func_r.html
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-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Members - Functions</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
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 </table>
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 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
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+$(function(){initNavTree('functions_func_r.html',''); initResizable(true); });
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@@ -95,30 +102,31 @@ $(document).ready(function(){initNavTree('functions_func_r.html',''); initResiza
 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
 <h3><a id="index_r" name="index_r"></a>- r -</h3><ul>
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-<li>RauscherThielemannPartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1RauscherThielemannPartitionFunction.html#ae67464baee3b12cdc0470be74524866c">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
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-<li>ReactionSet()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#a9a63306b92e23e3651c955ab614084de">gridfire::reaction::ReactionSet</a></li>
-<li>rebuild()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a2444b9ed3bc61920ce23c546444269e4">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a6c5245a27da1b45e10fb410518b79d4e">gridfire::engine::GraphEngine</a>, <a class="el" href="classPyDynamicEngine.html#a25e52496b36d731127603c31e9dcaa97">PyDynamicEngine</a></li>
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-<li>remove_reaction()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#a1177193b1e46b4e5be630028883ab8dd">gridfire::reaction::ReactionSet</a></li>
-<li>rescueEdgeSpeciesDestructionChannel()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#a85e70c0ff022c31702472aa39fc64816">gridfire::engine::AdaptiveEngineView</a></li>
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+<li>rank()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#af9544f4cec7b450027fe991614adabfa">gridfire::engine::NetworkJacobian</a></li>
+<li>rateCoefficients()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#adfed51cf788a7ed4770cbd5945ddab2f">gridfire::reaction::ReaclibReaction</a></li>
+<li>RauscherThielemannPartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#ae67464baee3b12cdc0470be74524866c">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
+<li>ReaclibReaction()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a264112a230817a6080c770686e5bcc01">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#a264112a230817a6080c770686e5bcc01">gridfire::reaction::WeakReaclibReaction</a></li>
+<li>reactant_species()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a4be8440aa7e79eab1d44b5d83bcdab79">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#aae06ff559026e3ce242a42cdd888c5a0">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad85ca288289b25d482cbb8e3ff270028">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a82c14096308cdc9126ab6d9667febcd2">gridfire::reaction::Reaction</a></li>
+<li>reactants()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a0c533797f18c2fe4945f1afb3fb06d5d">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a1362d46630f30203027093e35883d1b1">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ad095aba46860fec0e68386bf04f7f142">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ac7b08c61cdc97268b9442afec4d08dad">gridfire::reaction::Reaction</a></li>
+<li>ReactionError()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1_reaction_error.html#a51a26442fb905643a6d871ab733f0ab5">gridfire::exceptions::ReactionError</a>, <a class="el" href="classgridfire_1_1exceptions_1_1_reaction_parsing_error.html#a51a26442fb905643a6d871ab733f0ab5">gridfire::exceptions::ReactionParsingError</a></li>
+<li>ReactionSet()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a9a63306b92e23e3651c955ab614084de">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a9a63306b92e23e3651c955ab614084de">gridfire::reaction::ReactionSet</a></li>
+<li>recordADTape()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#af9cba639f9eeac0b746ef073670292e6">gridfire::engine::GraphEngine</a></li>
+<li>rel_failure()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#af9029eaecd0c7ee738e1a845be69b503">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></li>
+<li>remove_reaction()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a1177193b1e46b4e5be630028883ab8dd">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a1177193b1e46b4e5be630028883ab8dd">gridfire::reaction::ReactionSet</a></li>
+<li>rescueEdgeSpeciesDestructionChannel()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a2739af9799f5b720a154d2f862ab7c30">gridfire::engine::AdaptiveEngineView</a></li>
+<li>reset()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a8cd581b8d3f5c54b4e62536e87134dd9">gridfire::solver::GridSolverContext</a>, <a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a2436d8643911ade907e03fb29531ceaa">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#abf218d255bde157540b51cd6a54f6eb1">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#afe337517b77e5433d92ded3a64565141">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#ab42043e55c81bac5d3f981bc139579de">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#ac2033bf03c23cac4092231de15ea5b72">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a0bcab0247b3db618b76bd6769cf9a2ea">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a9b782cbf033ed2023da6b2d55dcefc4e">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#af4034fa431e6c88fd05c50cce31b2fa0">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a0fe6af73b11b820561bd4e5552890d4e">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#af652af761675736419b961b6946c728d">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
+<li>reset_all()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a3a339c970f45511a22ab8be1bd906a30">gridfire::solver::PointSolverContext</a></li>
+<li>reset_cvode()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a66b1b37b00a5f7c858424d09781d7ebb">gridfire::solver::PointSolverContext</a></li>
+<li>reset_user()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#aac1be4b918a38bfa9c37545510cd0a99">gridfire::solver::PointSolverContext</a></li>
+<li>rev_sparse_jac()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html#af5b5eff42682cf278fa4559e50c47eed">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html#ae9d61bdda761da89733408c232d7220e">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
+<li>reverse()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine_1_1_atomic_reverse_rate.html#a23aed1727ab0cbba996561421e754018">gridfire::engine::GraphEngine::AtomicReverseRate</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1_atomic_weak_rate.html#aad13654ea15547c2c95035c3b7937d58">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></li>
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 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Members - Functions</title>
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@@ -27,7 +29,7 @@
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   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
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@@ -95,43 +102,40 @@ $(document).ready(function(){initNavTree('functions_func_s.html',''); initResiza
 <div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
 
 <h3><a id="index_s" name="index_s"></a>- s -</h3><ul>
-<li>selectPartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1CompositePartitionFunction.html#a32f397abf9e9ace9f0c721e4e14eb60b">gridfire::partition::CompositePartitionFunction</a></li>
-<li>set()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#a6fc63f3c5d3fe7a1fd8b0704f2e71e2c">gridfire::engine::NetworkJacobian</a></li>
-<li>set_absTol()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#aed8907852f77c15bb40d5a8e8f8af9b2">gridfire::solver::CVODESolverStrategy</a></li>
-<li>set_callback()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a77638ef3d2279009e5a57bbd3f0eb63b">gridfire::solver::CVODESolverStrategy</a>, <a class="el" href="classgridfire_1_1solver_1_1NetworkSolverStrategy.html#a4d97ee85933d5e5f90d4194bb021a1dc">gridfire::solver::NetworkSolverStrategy&lt; EngineT &gt;</a>, <a class="el" href="classPyDynamicNetworkSolverStrategy.html#a112a7babc03858a69d6994a7155370d3">PyDynamicNetworkSolverStrategy</a></li>
-<li>set_detailed_step_logging()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a91966d110ca6225af60b633af5521cb4">gridfire::solver::CVODESolverStrategy</a></li>
-<li>set_relTol()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a6444290be523ad9fa91fa57c1dd4b6a2">gridfire::solver::CVODESolverStrategy</a></li>
-<li>set_stdout_logging_enabled()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a9857665a1198e24aac6add02afc6e306">gridfire::solver::CVODESolverStrategy</a></li>
-<li>setNetworkReactions()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#a5dbfcafa606c3242dc4ced62c2494a2d">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#ae89529e13f2b7fd2febcfa5af40d4666">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#ab321170954bffc53b1bedaf54f6976be">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a90251650123d0d8ce0281e18c4476f45">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html#aa378d0e0fa6018b989d83945daa47952">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="classPyDynamicEngine.html#af469cba3be850d53f659ec173f0eb4e4">PyDynamicEngine</a></li>
-<li>setPrecomputation()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a0e0650a14247a7f43623d58de8eedb19">gridfire::engine::GraphEngine</a></li>
-<li>setScreeningModel()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#ab050409db954a3fa593633f9d2cd5d89">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a68bd0e51d3e127e5f9fd74fdb8180fd9">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a50e76977d0dc3cc23d52b51842d35003">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#af842981deaf84a698b6cbfa66abcb715">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html#ad11aa1e168ec03d0c3ed90eeddcefe52">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="classPyDynamicEngine.html#afa3abfd612033336a656f092721c14ac">PyDynamicEngine</a></li>
-<li>setup_policy()&#160;:&#160;<a class="el" href="structgridfire__mod_1_1gridfire.html#a2537a8b237e390fefea02ae2da46f851">gridfire_mod::gridfire</a></li>
-<li>setup_solver()&#160;:&#160;<a class="el" href="structgridfire__mod_1_1gridfire.html#a973855fa1cc81b0afd5a599cec1d6fcf">gridfire_mod::gridfire</a></li>
-<li>setUseReverseReactions()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a959928abbef89fd0a20264ef8b79c111">gridfire::engine::GraphEngine</a></li>
-<li>shape()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#a699933e9f807ec196157f92ffb46b9ba">gridfire::engine::NetworkJacobian</a></li>
-<li>SimpleReactionListFileParser()&#160;:&#160;<a class="el" href="classgridfire_1_1io_1_1SimpleReactionListFileParser.html#afc8ed91e8c98205c505e3d9f0cff1993">gridfire::io::SimpleReactionListFileParser</a></li>
-<li>SimulationTimeTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html#a235f84a37370a1ca2226fb881b4051c7">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></li>
-<li>singular()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#a485321469d84b3cf923ec79957044406">gridfire::engine::NetworkJacobian</a></li>
-<li>size()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1MultiReactionChainPolicy.html#a84fcdc2adab96284d850f8dd43315278">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1LogicalReaclibReaction.html#a4c58951d9f7ab252717c226b0da80a9d">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::reaction::ReactionSet</a></li>
-<li>solve()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html#aa6f28cf2f5759efad7d428f6794cc151">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
-<li>solveQSEAbundances()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html#a6c785a6334e5fd9593d3e279bafee592">gridfire::engine::MultiscalePartitioningEngineView</a></li>
-<li>solves()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html#a420ca8991dd60fac7a9d18fae0eda0c1">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
-<li>sourceLabel()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#a96d4ab87de02e9b0be3c248e2e955b4b">gridfire::reaction::ReaclibReaction</a></li>
-<li>sources()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1LogicalReaclibReaction.html#ad4979f437dc787a5475c3a029804ed99">gridfire::reaction::LogicalReaclibReaction</a></li>
-<li>step()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1AndTrigger.html#a8e743e8ebe71f9ded835177db6fad908">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1EveryNthTrigger.html#a26d0aca39087a1f69e96e0701ca83f81">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1NotTrigger.html#a5096cb7e70ea357f28e1b9fc8301c793">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html#a95a801aafb5aaa9a22566ebf722a1150">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html#aaef2090ed67a7c27967821f75a61e524">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html#a8b882c6ba6e267d7051031140bbb7ad6">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html#aafc7f40bde2c78f4d100b6f9da771831">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1TimestepCollapseTrigger.html#a9723e389aeba05fdb3d4fd1dcc1ba07d">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1Trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
-<li>StepDerivatives()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1StepDerivatives.html#ab6f82eeaf31cdb66fb40267838b19a34">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
-<li>stoichiometry()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html#a1f4acfdb39bb861aaee9f3f28cfc406e">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#a0f629cbfe95dc5643b5e3724be0db2f9">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html#ab7888b57507d6d27de6e5fcaea40fff5">gridfire::reaction::Reaction</a></li>
-<li>supports()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1CompositePartitionFunction.html#ae8908a78f087ea516cdd5a4cdd449a9c">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1GroundStatePartitionFunction.html#a49b18aae58eb6250aaa23d43d55f02bd">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1PartitionFunction.html#a6df4191d10516477371a0384e1e55bf5">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1RauscherThielemannPartitionFunction.html#a588a11c654751765b04d6425c99041f5">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="classPyPartitionFunction.html#a0f288a01a3ed7fb92fff5d9fd7d56aa8">PyPartitionFunction</a></li>
-<li>syncInternalMaps()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a9af928bf8a5327d3cb45254c0e59f914">gridfire::engine::GraphEngine</a></li>
-<li>sys_func()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html#a58b7b2ac01c40084cc839309267e400e">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
-<li>sys_jac()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html#a9a34e36baa074c1b39b230e0b5010a82">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>ScratchPadError()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html#aa1b308d4337acf4748d394ce4d50c5c3">gridfire::exceptions::ScratchPadError</a></li>
+<li>selectPartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#a32f397abf9e9ace9f0c721e4e14eb60b">gridfire::partition::CompositePartitionFunction</a></li>
+<li>set()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a6fc63f3c5d3fe7a1fd8b0704f2e71e2c">gridfire::engine::NetworkJacobian</a></li>
+<li>set_callback()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#aed2cba60fbf2e45c6f5f30051e49460e">gridfire::solver::GridSolverContext</a></li>
+<li>set_detailed_logging()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a02215c68ebc4a488343aabb495791c77">gridfire::solver::GridSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#ad78dbc3cf9da0a5e508f08343f2c6da5">gridfire::solver::PointSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a4b8185f8b9d46d19d0b0c2bfba16391f">gridfire::solver::SolverContextBase</a>, <a class="el" href="class_py_solver_context_base.html#a2400e5ab20fe2e5c31a712cb9b24aebe">PySolverContextBase</a></li>
+<li>set_stdout_logging()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#af90f3a9d7f688b52cd3ee201af6b0b7f">gridfire::solver::GridSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#aa9a3442738429f362a9f10fe92d5a1ea">gridfire::solver::PointSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a693d8ad4649456ff3cf956072614a2e7">gridfire::solver::SolverContextBase</a>, <a class="el" href="class_py_solver_context_base.html#af8f861a94e0a6654a8f9b752a28ad0e7">PySolverContextBase</a></li>
+<li>set_store_intermediate_reaction_contributions()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac1958cc24ff3c69eac7b5b9e7bb6e510">gridfire::engine::GraphEngine</a></li>
+<li>set_zones()&#160;:&#160;<a class="el" href="struct_g_f_grid_context.html#ae6bbc4c400e9afb1d57087a7cdc00d60">GFGridContext</a></li>
+<li>shape()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a699933e9f807ec196157f92ffb46b9ba">gridfire::engine::NetworkJacobian</a></li>
+<li>SimpleReactionListFileParser()&#160;:&#160;<a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#afc8ed91e8c98205c505e3d9f0cff1993">gridfire::io::SimpleReactionListFileParser</a></li>
+<li>SimulationTimeTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a235f84a37370a1ca2226fb881b4051c7">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></li>
+<li>SingleZoneNetworkSolver()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a></li>
+<li>singular()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a485321469d84b3cf923ec79957044406">gridfire::engine::NetworkJacobian</a></li>
+<li>size()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#a84fcdc2adab96284d850f8dd43315278">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#a4c58951d9f7ab252717c226b0da80a9d">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::reaction::ReactionSet</a></li>
+<li>solve()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a2f6b5cedc410cb7b60ca757dc9855426">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>solveQSEAbundances()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#adcc3bd5427974ecc3e1b2af60f948186">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>solves()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a420ca8991dd60fac7a9d18fae0eda0c1">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>sourceLabel()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a96d4ab87de02e9b0be3c248e2e955b4b">gridfire::reaction::ReaclibReaction</a></li>
+<li>sources()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#ad4979f437dc787a5475c3a029804ed99">gridfire::reaction::LogicalReaclibReaction</a></li>
+<li>StateBlob()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a69e65e83e5f3ab48edd12a27c293e074">gridfire::engine::scratch::StateBlob</a></li>
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+<li>StepDerivatives()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html#ab6f82eeaf31cdb66fb40267838b19a34">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
+<li>stoichiometry()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a55b7f61d9bde45f2ca485c1b07a05950">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a8bf7dc26d9f1375625df99bceba08a44">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a57b2695d152360a6ba08776cc760e3a1">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#ad49f4cad024db72c966d949c75f1ce4d">gridfire::reaction::Reaction</a></li>
+<li>supports()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#ae8908a78f087ea516cdd5a4cdd449a9c">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#a49b18aae58eb6250aaa23d43d55f02bd">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#a6df4191d10516477371a0384e1e55bf5">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a588a11c654751765b04d6425c99041f5">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="class_py_partition_function.html#a0f288a01a3ed7fb92fff5d9fd7d56aa8">PyPartitionFunction</a></li>
+<li>syncInternalMaps()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#a9af928bf8a5327d3cb45254c0e59f914">gridfire::engine::GraphEngine</a></li>
+<li>sys_func()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a58b7b2ac01c40084cc839309267e400e">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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 <script type="text/javascript" src="search/search.js"></script>
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  <tbody>
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+/* @license-end */
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+  initMenu('',true,false,'search.php','Search',true);
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 </div>
 <script type="text/javascript">
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+<li>Table()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1_table.html#a7b99d3e53f953afa6bc8eb0233d3c1f3">gridfire::utils::Table&lt; T &gt;</a></li>
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+<li>to_csv()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a8267f02eacb52d238da6daa19dbea764">gridfire::engine::NetworkJacobian</a></li>
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+<li>TripleAlphaChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html#a857760f885820ad7cb0cee2d8512d36d">gridfire::policy::TripleAlphaChainPolicy</a></li>
+<li>type()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a186856dc2ce85d8cc4db43c7164b6afa">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#a66560e21a4a7b08e8da135ce8279ed88">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#af8d0146fc2afedf3785ae9ec932d3250">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#ab0c67985a972707eac0ebc64417dfb97">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a3aa478acf12e09b6dd268f744071b2a0">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#aade329265a26bdc005c0793ba7a36ab2">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#acbfa2d4e23dff6641be21cc1e754be15">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3c0fbdd07f9a837bd031c5bdc58e0e8f">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a7f2590eee9f0dfb7b73cd92170a844b7">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#af191b4afdf41a9916ecf9647e88d8037">gridfire::reaction::WeakReaclibReaction</a>, <a class="el" href="class_py_partition_function.html#a07f4d0ff83822dd2800897161d2a3717">PyPartitionFunction</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+<li>update()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a62f7dbbcf0554caa68e3d778580b3c1d">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a0dd783afab7ef6005f0241f9de7b31f6">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#a846432abf33c7602af0fbb5475c0ad32">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a775dac97d109c5fcd5c0287ca98f308c">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a10060fb599c14ffdd57aceef5f2a6ed8">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#a0569c964fb1a2bc1b162aa76c48f19ce">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a02c83c9e0f6e195cd91cf6f69a37622a">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ae6c1d1cc68b5ac422e0d606e44c45783">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a6042258a7bf4d8bd53fe9ed176a52143">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a048899795704f68668960454d118a6fc">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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 </table>
 </div>
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-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
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 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('functions_func_v.html',''); initResizable(); });
+$(function(){initNavTree('functions_func_v.html',''); initResizable(true); });
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 <div id="doc-content">
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-<li>validateConservation()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a87bf3a33fc21f7da2a26173ebdfa69f7">gridfire::engine::GraphEngine</a></li>
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-<li>validateNetworkState()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a91ea88e43c17f99ff0d95a8f54b09cbf">gridfire::engine::DefinedEngineView</a></li>
-<li>validateState()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#a63837a6a4343a2ac6a61e21576b62655">gridfire::engine::AdaptiveEngineView</a></li>
+<li>validateGroupsWithFluxAnalysis()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#aa449a5eadf14462e4ff270ed62c63fab">gridfire::engine::MultiscalePartitioningEngineView</a></li>
 </ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/functions_func_w.html b/docs/html/functions_func_w.html
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--- a/docs/html/functions_func_w.html
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@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Members - Functions</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('functions_func_w.html',''); initResizable(); });
+$(function(){initNavTree('functions_func_w.html',''); initResizable(true); });
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-<li>WeakReactionMap()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReactionMap.html#aecc8c1b92d63da87827879ad5330c11e">gridfire::rates::weak::WeakReactionMap</a></li>
-<li>what()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1GridFireError.html#a6986522d45e8d94da310d1b37373414c">gridfire::exceptions::GridFireError</a>, <a class="el" href="classgridfire_1_1exceptions_1_1ReactionError.html#a7bc47cdb02c2f8a803306cb9bb75b1af">gridfire::exceptions::ReactionError</a></li>
-<li>why()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1AndTrigger.html#a01033721e8f5d90483d65c904399cf96">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1EveryNthTrigger.html#a3bf0d69122f801deca4b62db47262d9b">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1NotTrigger.html#abfb3eb7befba646ce9f11f36a63750ae">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html#a7bca0da16353f4b04a2f40fb29c07922">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html#aedd397b71cd5b1ad26a0b21a34cf5631">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html#a3af973e466ba62ebf1e41c608355e327">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html#a9dfab0b765d3a4c362cecd860d59f58a">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1TimestepCollapseTrigger.html#a22d8bc7aacbc388108225c26158e918c">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1Trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
+<li>WeakRateInterpolator()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html#a1efafe82d25d36b93a60a6fccbd5ca3d">gridfire::rates::weak::WeakRateInterpolator</a></li>
+<li>WeakReaction()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#a222c0662bf5323037c9fdddfb929d4f7">gridfire::rates::weak::WeakReaction</a></li>
+<li>WeakReactionMap()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html#aecc8c1b92d63da87827879ad5330c11e">gridfire::rates::weak::WeakReactionMap</a></li>
+<li>what()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1_grid_fire_error.html#a6986522d45e8d94da310d1b37373414c">gridfire::exceptions::GridFireError</a>, <a class="el" href="classgridfire_1_1exceptions_1_1_reaction_error.html#a7bc47cdb02c2f8a803306cb9bb75b1af">gridfire::exceptions::ReactionError</a></li>
+<li>why()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html#a01033721e8f5d90483d65c904399cf96">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#a3bf0d69122f801deca4b62db47262d9b">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#abfb3eb7befba646ce9f11f36a63750ae">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#a7bca0da16353f4b04a2f40fb29c07922">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html#a7384d0e3e67ad6e19a1c7e25cec10ac9">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html#af2ac29e690bf7ee3e23dc23991e9a401">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html#a350a34e34543f35a57785a0c42a4689c">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#ad27967c054709ca5ac49998e695731a4">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a47335ede9fe59cc6e76e670bc4e7218d">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a9f020d828ca36a601b780566cc3377ea">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
 </ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
 </div>
 </body>
diff --git a/docs/html/functions_func_~.html b/docs/html/functions_func_~.html
index 012995bc..5bc11dcd 100644
--- a/docs/html/functions_func_~.html
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 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Members - Functions</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
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+<li>~NotTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html#afa4173490171d1251cc1757b92841755">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a></li>
+<li>~OrTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#afe30f95de39c1375557d032b8a8111f9">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a></li>
+<li>~PartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#a197a0663dcfb4ab4be3b0e14b98391db">gridfire::partition::PartitionFunction</a></li>
+<li>~PointSolverContext()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#adc6829dc77b6ef540af93c1b7e2e4f16">gridfire::solver::PointSolverContext</a></li>
+<li>~QSESolver()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a308ee7b77cde2658ea0c1e43827cea49">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>~ReaclibReaction()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae2b9b41a598c5f0dcd050b32985ea44e">gridfire::reaction::ReaclibReaction</a></li>
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+<li>~ScreeningModel()&#160;:&#160;<a class="el" href="classgridfire_1_1screening_1_1_screening_model.html#adef175acdbd911527f56a1f1592579a7">gridfire::screening::ScreeningModel</a></li>
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+<li>~SolverContextBase()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">gridfire::solver::SolverContextBase</a></li>
+<li>~SolverPluginInterface()&#160;:&#160;<a class="el" href="class_solver_plugin_interface.html#a5611d046cd2fd4d4200785725854e39b">SolverPluginInterface</a></li>
+<li>~StateBlob()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a0862bba44ed4b5ec02de440e53930567">gridfire::engine::scratch::StateBlob</a></li>
+<li>~TableBase()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1_table_base.html#a0529d4130643358562e1c1d1f78c924f">gridfire::utils::TableBase</a></li>
+<li>~TemperatureDependentChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html#a74b59b1cb02703834373fb7a3d09614e">gridfire::policy::TemperatureDependentChainPolicy</a></li>
+<li>~TimestepContextBase()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html#a6c82f2104d1b3f7f1926dddf69912251">gridfire::solver::TimestepContextBase</a></li>
+<li>~Trigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_trigger.html#a2c077ccbaf4de9f7068e50144391edda">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
+<li>~WeakReactionMap()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html#a73cc5a9d4a236091bbb40f22ed66b2f1">gridfire::rates::weak::WeakReactionMap</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/functions_g.html b/docs/html/functions_g.html
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+<li>nans()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a9292384722bcb0245acab9affcdb8c6d">gridfire::engine::NetworkJacobian</a></li>
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+<li>operator!=()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#a5ec476b65fcedc5e4eb603a18037bf25">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a>, <a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#aa36844fe4417617175d31124e541da50">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html#ac19e354a8bcd28f60783b70d8a761030">gridfire::policy::ReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html#a264dc45c3410ab3ec49a340633aa5950">gridfire::policy::TemperatureDependentChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a8b6008e0f629329bfc62256f4f081b77">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8">gridfire::reaction::ReactionSet</a>, <a class="el" href="class_py_reaction_chain_policy.html#a8e3c5cdd4c1901bedf93168868a759a9">PyReactionChainPolicy</a></li>
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+<li>operator&gt;()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#adc1710fde415de7a337dbec664b16e45">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
+<li>operator[]()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">gridfire::reaction::ReactionSet</a>, <a class="el" href="classgridfire_1_1utils_1_1_table.html#a405477a1b9ecf0f1dc84ec102cdec7b3">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1_table_base.html#a33d1f279cc02a4edb66e846bb7b10077">gridfire::utils::TableBase</a></li>
+<li>OrTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html#aaf4f8a090bdd10eeba0b7849fa8ed888">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a></li>
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-<li>setScreeningModel()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#ab050409db954a3fa593633f9d2cd5d89">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a68bd0e51d3e127e5f9fd74fdb8180fd9">gridfire::engine::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a50e76977d0dc3cc23d52b51842d35003">gridfire::engine::DynamicEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#af842981deaf84a698b6cbfa66abcb715">gridfire::engine::GraphEngine</a>, <a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html#ad11aa1e168ec03d0c3ed90eeddcefe52">gridfire::engine::MultiscalePartitioningEngineView</a>, <a class="el" href="classPyDynamicEngine.html#afa3abfd612033336a656f092721c14ac">PyDynamicEngine</a></li>
-<li>setup_policy()&#160;:&#160;<a class="el" href="structgridfire__mod_1_1gridfire.html#a2537a8b237e390fefea02ae2da46f851">gridfire_mod::gridfire</a></li>
-<li>setup_solver()&#160;:&#160;<a class="el" href="structgridfire__mod_1_1gridfire.html#a973855fa1cc81b0afd5a599cec1d6fcf">gridfire_mod::gridfire</a></li>
-<li>setUseReverseReactions()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a959928abbef89fd0a20264ef8b79c111">gridfire::engine::GraphEngine</a></li>
-<li>shape()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html#a699933e9f807ec196157f92ffb46b9ba">gridfire::engine::NetworkJacobian</a></li>
-<li>SimpleReactionListFileParser()&#160;:&#160;<a class="el" href="classgridfire_1_1io_1_1SimpleReactionListFileParser.html#afc8ed91e8c98205c505e3d9f0cff1993">gridfire::io::SimpleReactionListFileParser</a></li>
-<li>SimulationTimeTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html#a235f84a37370a1ca2226fb881b4051c7">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></li>
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-<li>size()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1MultiReactionChainPolicy.html#a84fcdc2adab96284d850f8dd43315278">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1LogicalReaclibReaction.html#a4c58951d9f7ab252717c226b0da80a9d">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::reaction::ReactionSet</a></li>
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-<li>solver&#160;:&#160;<a class="el" href="structGridFireContext.html#a958e9c99e8759bf8388df5689fd45baa">GridFireContext</a></li>
-<li>solver_instance&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1CVODEUserData.html#ad7f3eb9caae25ef25357c41c23d6b392">gridfire::solver::CVODESolverStrategy::CVODEUserData</a></li>
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-<li>sources()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1LogicalReaclibReaction.html#ad4979f437dc787a5475c3a029804ed99">gridfire::reaction::LogicalReaclibReaction</a></li>
-<li>speciesList&#160;:&#160;<a class="el" href="structGridFireContext.html#af6c7cfb326dd3540ce615ecb67935959">GridFireContext</a></li>
-<li>specific_neutrino_energy_loss&#160;:&#160;<a class="el" href="structgridfire_1_1NetOut.html#a801b7bf34375fc56cc6e6cdaef77b070">gridfire::NetOut</a></li>
-<li>specific_neutrino_flux&#160;:&#160;<a class="el" href="structgridfire_1_1NetOut.html#a84a4f64f5a6b7ff965c36b4f7f8aa8f6">gridfire::NetOut</a></li>
-<li>speedOfLight&#160;:&#160;<a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakReaction_1_1constants.html#a016c3e02f622e21073f9110707177b76">gridfire::rates::weak::WeakReaction::constants</a></li>
-<li>state&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#aaae3c42b9172be4d501f022e67f5a6f6">gridfire::solver::CVODESolverStrategy::TimestepContext</a></li>
-<li>status&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html#ac3e0c141e56c7bc41dd89d5fc873fa41">gridfire::engine::PrimingReport</a></li>
-<li>step()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1AndTrigger.html#a8e743e8ebe71f9ded835177db6fad908">gridfire::trigger::AndTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1EveryNthTrigger.html#a26d0aca39087a1f69e96e0701ca83f81">gridfire::trigger::EveryNthTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1NotTrigger.html#a5096cb7e70ea357f28e1b9fc8301c793">gridfire::trigger::NotTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html#a95a801aafb5aaa9a22566ebf722a1150">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html#aaef2090ed67a7c27967821f75a61e524">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html#a8b882c6ba6e267d7051031140bbb7ad6">gridfire::trigger::solver::CVODE::OffDiagonalTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html#aafc7f40bde2c78f4d100b6f9da771831">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1TimestepCollapseTrigger.html#a9723e389aeba05fdb3d4fd1dcc1ba07d">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a>, <a class="el" href="classgridfire_1_1trigger_1_1Trigger.html#a4b7ffa4d8d31e2118a8e86172be51041">gridfire::trigger::Trigger&lt; TriggerContextStruct &gt;</a></li>
-<li>StepDerivatives()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1StepDerivatives.html#ab6f82eeaf31cdb66fb40267838b19a34">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
-<li>stoichiometric_coefficients&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1GraphEngine_1_1PrecomputedReaction.html#a333e30364947d83549b20d857641d646">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
-<li>stoichiometry()&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html#a1f4acfdb39bb861aaee9f3f28cfc406e">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1ReaclibReaction.html#a0f629cbfe95dc5643b5e3724be0db2f9">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html#ab7888b57507d6d27de6e5fcaea40fff5">gridfire::reaction::Reaction</a></li>
-<li>success&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html#a68aa5f346f5d9d598bf921e175c49239">gridfire::engine::PrimingReport</a></li>
-<li>supports()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1CompositePartitionFunction.html#ae8908a78f087ea516cdd5a4cdd449a9c">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1GroundStatePartitionFunction.html#a49b18aae58eb6250aaa23d43d55f02bd">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1PartitionFunction.html#a6df4191d10516477371a0384e1e55bf5">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1RauscherThielemannPartitionFunction.html#a588a11c654751765b04d6425c99041f5">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="classPyPartitionFunction.html#a0f288a01a3ed7fb92fff5d9fd7d56aa8">PyPartitionFunction</a></li>
-<li>symmetry_factor&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1GraphEngine_1_1PrecomputedReaction.html#aa4ae79e03a28fd221759ea93bda389d5">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
-<li>syncInternalMaps()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html#a9af928bf8a5327d3cb45254c0e59f914">gridfire::engine::GraphEngine</a></li>
-<li>sys_func()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html#a58b7b2ac01c40084cc839309267e400e">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
-<li>sys_jac()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver.html#a9a34e36baa074c1b39b230e0b5010a82">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>scratch_blob&#160;:&#160;<a class="el" href="structgridfire_1_1policy_1_1_construction_results.html#a1d36074833fb53b63e7967193f1434b4">gridfire::policy::ConstructionResults</a></li>
+<li>scratchpad_enrolled_flags&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a327081a9f42e5ff242adacbc304638b5">gridfire::engine::scratch::StateBlob</a></li>
+<li>ScratchPadError()&#160;:&#160;<a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html#aa1b308d4337acf4748d394ce4d50c5c3">gridfire::exceptions::ScratchPadError</a></li>
+<li>scratchpads&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a386785b28d25459a616812281bb2ced5">gridfire::engine::scratch::StateBlob</a></li>
+<li>ScratchPadStatus&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a8c998621c476665e812be930664286e6">gridfire::engine::scratch::StateBlob</a></li>
+<li>sctx&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html#a1797578ad8bed04e9a7e3f44fa49e532">gridfire::solver::PointSolver::CVODEUserData</a></li>
+<li>seed_species&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#a9434050b990ecfa0459feebff3047ee2">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
+<li>selectPartitionFunction()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#a32f397abf9e9ace9f0c721e4e14eb60b">gridfire::partition::CompositePartitionFunction</a></li>
+<li>set()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a6fc63f3c5d3fe7a1fd8b0704f2e71e2c">gridfire::engine::NetworkJacobian</a></li>
+<li>set_callback()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#aed2cba60fbf2e45c6f5f30051e49460e">gridfire::solver::GridSolverContext</a></li>
+<li>set_detailed_logging()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a02215c68ebc4a488343aabb495791c77">gridfire::solver::GridSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#ad78dbc3cf9da0a5e508f08343f2c6da5">gridfire::solver::PointSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a4b8185f8b9d46d19d0b0c2bfba16391f">gridfire::solver::SolverContextBase</a>, <a class="el" href="class_py_solver_context_base.html#a2400e5ab20fe2e5c31a712cb9b24aebe">PySolverContextBase</a></li>
+<li>set_stdout_logging()&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#af90f3a9d7f688b52cd3ee201af6b0b7f">gridfire::solver::GridSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#aa9a3442738429f362a9f10fe92d5a1ea">gridfire::solver::PointSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a693d8ad4649456ff3cf956072614a2e7">gridfire::solver::SolverContextBase</a>, <a class="el" href="class_py_solver_context_base.html#af8f861a94e0a6654a8f9b752a28ad0e7">PySolverContextBase</a></li>
+<li>set_store_intermediate_reaction_contributions()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html#ac1958cc24ff3c69eac7b5b9e7bb6e510">gridfire::engine::GraphEngine</a></li>
+<li>set_zones()&#160;:&#160;<a class="el" href="struct_g_f_grid_context.html#ae6bbc4c400e9afb1d57087a7cdc00d60">GFGridContext</a></li>
+<li>shape()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a699933e9f807ec196157f92ffb46b9ba">gridfire::engine::NetworkJacobian</a></li>
+<li>SimpleReactionListFileParser()&#160;:&#160;<a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#afc8ed91e8c98205c505e3d9f0cff1993">gridfire::io::SimpleReactionListFileParser</a></li>
+<li>SimulationTimeTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html#a235f84a37370a1ca2226fb881b4051c7">gridfire::trigger::solver::CVODE::SimulationTimeTrigger</a></li>
+<li>SingleZoneNetworkSolver()&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html#a73803c687b93d07f5c148662cc972e70">gridfire::solver::SingleZoneNetworkSolver&lt; EngineT &gt;</a></li>
+<li>singular()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a485321469d84b3cf923ec79957044406">gridfire::engine::NetworkJacobian</a></li>
+<li>size()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::engine::ReactionSet</a>, <a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#a84fcdc2adab96284d850f8dd43315278">gridfire::policy::MultiReactionChainPolicy</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#a4c58951d9f7ab252717c226b0da80a9d">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#af14cf34d7367cb6a6be5191724c2d4cf">gridfire::reaction::ReactionSet</a></li>
+<li>solve()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a2f6b5cedc410cb7b60ca757dc9855426">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>solveQSEAbundances()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#adcc3bd5427974ecc3e1b2af60f948186">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>solver&#160;:&#160;<a class="el" href="struct_g_f_grid_context.html#a92cf3bc0d148eda660cccce86bffedc3">GFGridContext</a>, <a class="el" href="struct_g_f_point_context.html#a05d85e0dc718ba0c8854e831a574f6ac">GFPointContext</a>, <a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html#add0dd0d5de97c55d8077558fdcf7f7b3">gridfire::config::GridFireConfig</a></li>
+<li>solver_ctx&#160;:&#160;<a class="el" href="struct_g_f_grid_context.html#a9e6229b2d28959adb9aae6524ed5f730">GFGridContext</a>, <a class="el" href="struct_g_f_point_context.html#a5158bd7c67f4a0e4395b78ce4009f275">GFPointContext</a></li>
+<li>solver_instance&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html#a6a9e63ce74c9b26309097d8aeeb228ed">gridfire::solver::PointSolver::CVODEUserData</a></li>
+<li>solver_workspaces&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#afe3a8b9630757cbbb4df07de04674e4c">gridfire::solver::GridSolverContext</a></li>
+<li>solves()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html#a420ca8991dd60fac7a9d18fae0eda0c1">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></li>
+<li>sourceLabel()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a96d4ab87de02e9b0be3c248e2e955b4b">gridfire::reaction::ReaclibReaction</a></li>
+<li>sources()&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#ad4979f437dc787a5475c3a029804ed99">gridfire::reaction::LogicalReaclibReaction</a></li>
+<li>Species&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a636e76d1c67cf412d92461590daa7dbe">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>species_index_map&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a05c0fe3d8e07eabff28b719e7565fccb">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></li>
+<li>speciesList&#160;:&#160;<a class="el" href="struct_g_f_context.html#ad65d2f34696aa6368a49768fc5c0ebf7">GFContext</a></li>
+<li>specific_neutrino_energy_loss&#160;:&#160;<a class="el" href="structgridfire_1_1_net_out.html#a801b7bf34375fc56cc6e6cdaef77b070">gridfire::NetOut</a></li>
+<li>specific_neutrino_flux&#160;:&#160;<a class="el" href="structgridfire_1_1_net_out.html#a84a4f64f5a6b7ff965c36b4f7f8aa8f6">gridfire::NetOut</a></li>
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+<li>timestep_callbacks&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a583ef194f336094dda0afdee6379c504">gridfire::solver::GridSolverContext</a></li>
+<li>timestepCollapseRatio&#160;:&#160;<a class="el" href="structgridfire_1_1config_1_1_trigger_config.html#a4f034b918299187594b7074b24ae88ba">gridfire::config::TriggerConfig</a></li>
+<li>TimestepCollapseTrigger()&#160;:&#160;<a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html#a171e6dee7f7d8275b3e8875eaeb0850d">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></li>
+<li>tMax&#160;:&#160;<a class="el" href="structgridfire_1_1_net_in.html#a0a8d820cfeaa92ee31f253795c57e0d1">gridfire::NetIn</a></li>
+<li>to_csv()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html#a8267f02eacb52d238da6daa19dbea764">gridfire::engine::NetworkJacobian</a></li>
+<li>toCSV()&#160;:&#160;<a class="el" href="classgridfire_1_1utils_1_1_table.html#a75503b09c879108faf597a5c93723e4a">gridfire::utils::Table&lt; T &gt;</a>, <a class="el" href="classgridfire_1_1utils_1_1_table_base.html#acd7d5ca97586c58a6b54d54370111597">gridfire::utils::TableBase</a></li>
+<li>toString()&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#aa56ff69de9025ce559202c06f95f8b6b">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></li>
+<li>total_neutrino_energy_loss_rate&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html#a41d711a6f545edb16615d9b6c78d0db2">gridfire::engine::GraphEngine::PrecomputationKernelResults</a></li>
+<li>total_neutrino_flux&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results.html#a38f78327edd6e0cd48df898305d7e080">gridfire::engine::GraphEngine::PrecomputationKernelResults</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_r_h_s_output_data.html#aa33e6ee77df9906a11a35210bb882705">gridfire::solver::PointSolver::CVODERHSOutputData</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html#ab26b161db829d2dc43e644f4388f9749">gridfire::solver::PointSolver::CVODEUserData</a></li>
+<li>totalNeutrinoFlux&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html#a97a3fe3cf9178044bcb57e371063a820">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
+<li>trigger&#160;:&#160;<a class="el" href="structgridfire_1_1config_1_1_point_solver_config.html#a165a6e90b7d05ba6506433b2cb3342e7">gridfire::config::PointSolverConfig</a></li>
+<li>TripleAlphaChainPolicy()&#160;:&#160;<a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html#a857760f885820ad7cb0cee2d8512d36d">gridfire::policy::TripleAlphaChainPolicy</a></li>
+<li>type()&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_reaction.html#a186856dc2ce85d8cc4db43c7164b6afa">gridfire::engine::Reaction</a>, <a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html#a66560e21a4a7b08e8da135ce8279ed88">gridfire::partition::CompositePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#af8d0146fc2afedf3785ae9ec932d3250">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html#ab0c67985a972707eac0ebc64417dfb97">gridfire::partition::PartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#a3aa478acf12e09b6dd268f744071b2a0">gridfire::partition::RauscherThielemannPartitionFunction</a>, <a class="el" href="structgridfire_1_1rates_1_1weak_1_1_interpolation_error.html#a086720ca534bc4c63d9341995e2f87bd">gridfire::rates::weak::InterpolationError</a>, <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#aade329265a26bdc005c0793ba7a36ab2">gridfire::rates::weak::WeakReaction</a>, <a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html#ad0bb77849bda4934472675e196af87c8">gridfire::rates::weak::WeakReactionEntry</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#acbfa2d4e23dff6641be21cc1e754be15">gridfire::reaction::LogicalReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html#a3c0fbdd07f9a837bd031c5bdc58e0e8f">gridfire::reaction::ReaclibReaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a7f2590eee9f0dfb7b73cd92170a844b7">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html#af191b4afdf41a9916ecf9647e88d8037">gridfire::reaction::WeakReaclibReaction</a>, <a class="el" href="class_py_partition_function.html#a07f4d0ff83822dd2800897161d2a3717">PyPartitionFunction</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/functions_type.html b/docs/html/functions_type.html
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+<meta name="generator" content="Doxygen 1.13.2"/>
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 <title>GridFire: Class Members - Typedefs</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
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-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
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 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+  initMenu('',true,false,'search.php','Search',true);
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@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
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+$(function(){initNavTree('functions_type.html',''); initResizable(true); });
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 <div id="doc-content">
@@ -93,20 +100,21 @@ $(document).ready(function(){initNavTree('functions_type.html',''); initResizabl
 
 <div class="contents">
 <div class="textblock">Here is a list of all typedefs with links to the classes they belong to:</div><ul>
-<li>ADDouble&#160;:&#160;<a class="el" href="classgridfire_1_1screening_1_1BareScreeningModel.html#a51119d705267e0b415aae8b4881d8c96">gridfire::screening::BareScreeningModel</a>, <a class="el" href="classgridfire_1_1screening_1_1ScreeningModel.html#a107ff2897f040d6f27f69d56a0bdd28d">gridfire::screening::ScreeningModel</a></li>
-<li>Config&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#a0a49d174e105adb3ffd9cf98ff58db3e">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a8d066e95f4cc201cbda90c2aec5d98c4">gridfire::engine::FileDefinedEngineView</a>, <a class="el" href="classgridfire_1_1io_1_1MESANetworkFileParser.html#af43ad8375abf1cedfdccc296b9958c2b">gridfire::io::MESANetworkFileParser</a>, <a class="el" href="classgridfire_1_1io_1_1SimpleReactionListFileParser.html#ad913155a5a2a36b29e4ce4ca8d71c036">gridfire::io::SimpleReactionListFileParser</a></li>
-<li>LogManager&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#ae8810c067d301b2f620869b0a5c8d5ce">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#af2183aba50db8f91055042425fb84766">gridfire::engine::FileDefinedEngineView</a>, <a class="el" href="classgridfire_1_1io_1_1MESANetworkFileParser.html#a84aa6894a331ad57bdab1e1ab85d4055">gridfire::io::MESANetworkFileParser</a>, <a class="el" href="classgridfire_1_1io_1_1SimpleReactionListFileParser.html#a6f8f9a1f54cd2be5ec66c3181be892de">gridfire::io::SimpleReactionListFileParser</a></li>
-<li>QSEPartition&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html#a892741542388166db4dc55631567ee0a">gridfire::engine::MultiscalePartitioningEngineView</a></li>
-<li>RescueSet&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html#a21367fa61169e6f5185bc91b40cc04be">gridfire::engine::AdaptiveEngineView</a></li>
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-<li>TimestepCallback&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html#a89c537c2f34ba3e202374304b7e5990a">gridfire::solver::CVODESolverStrategy</a></li>
+<li>ADDouble&#160;:&#160;<a class="el" href="classgridfire_1_1screening_1_1_bare_screening_model.html#a51119d705267e0b415aae8b4881d8c96">gridfire::screening::BareScreeningModel</a>, <a class="el" href="classgridfire_1_1screening_1_1_screening_model.html#a107ff2897f040d6f27f69d56a0bdd28d">gridfire::screening::ScreeningModel</a></li>
+<li>LogManager&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#ae8810c067d301b2f620869b0a5c8d5ce">gridfire::engine::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#a84aa6894a331ad57bdab1e1ab85d4055">gridfire::io::MESANetworkFileParser</a>, <a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a6f8f9a1f54cd2be5ec66c3181be892de">gridfire::io::SimpleReactionListFileParser</a></li>
+<li>QSEGroup&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ad81d359207946b3955fc59c78fd7d4f4">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>QSEPartition&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#a892741542388166db4dc55631567ee0a">gridfire::engine::MultiscalePartitioningEngineView</a></li>
+<li>QSESolver&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a3b472db4b4723d3a1c87220144cc9b35">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>RescueSet&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html#a21367fa61169e6f5185bc91b40cc04be">gridfire::engine::AdaptiveEngineView</a></li>
+<li>RowDataTable&#160;:&#160;<a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html#afd3e0e1c5edaf12609b5fc81c379e3e5">gridfire::rates::weak::WeakRateInterpolator</a></li>
+<li>Species&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a636e76d1c67cf412d92461590daa7dbe">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
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 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/functions_u.html b/docs/html/functions_u.html
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 <script type="text/javascript" src="search/search.js"></script>
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  <tbody>
  <tr id="projectrow">
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+<li>ctx_type&#160;:&#160;<a class="el" href="structgridfire__mod_1_1gridfire.html#aaebba95942c6db1d51b201d2fde78615">gridfire_mod::gridfire</a></li>
+<li>culling&#160;:&#160;<a class="el" href="structgridfire_1_1_net_in.html#a6a5e909b46094ffa20da9a3da906e43f">gridfire::NetIn</a></li>
+<li>current_neutrino_energy_loss_rate&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ab7d9e6258c7b11d04be596a248b8943f">gridfire::solver::PointSolverTimestepContext</a></li>
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+<li>description&#160;:&#160;<a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html#aaf99ffdeb73f5e792e61c4cca68aa157">gridfire::trigger::TriggerResult</a></li>
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+<li>dydt&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html#aad90bec88a31fce600c60c29835410b1">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
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+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<li>flux_coupling_threshold&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a95836c7415ca6598185a612e0677ee89">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>func_code&#160;:&#160;<a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html#a7f54bd3e068a61b4e90de8d8f4d7207a">gridfire::io::gen::PyFunctionDef</a></li>
+<li>func_name&#160;:&#160;<a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html#a795d0022f7c645fc443781dc6bf35121">gridfire::io::gen::PyFunctionDef</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+</div>
+</div>
+</div>
+</div>
+
+<div class="contents">
+<div class="textblock">Here is a list of all variables with links to the classes they belong to:</div>
+
+<h3><a id="index_h" name="index_h"></a>- h -</h3><ul>
+<li>has_initialized&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a1e21ec9fcd89cc3af2a93d7105fd95d5">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a27dc58c422ed8613433b8e9377f1a55a">gridfire::engine::scratch::DefinedEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ab1bc25e2aef7ac5a886811db9173f440">gridfire::engine::scratch::GraphEngineScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a3c44438f2b807451a0ac56a2b57900b6">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+<div class="textblock">Here is a list of all variables with links to the classes they belong to:</div>
+
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+<li>pointSolver&#160;:&#160;<a class="el" href="structgridfire_1_1config_1_1_solver_config.html#ae4862216cb51fefa9fbd792ace8cee18">gridfire::config::SolverConfig</a></li>
+<li>policy&#160;:&#160;<a class="el" href="struct_g_f_context.html#a6d053d819a80084fcda10cb00d06f9f8">GFContext</a></li>
+<li>primedComposition&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_priming_report.html#a73acbf3cbec59f5516e4c7aa3f6ca150">gridfire::engine::PrimingReport</a></li>
+<li>product_powers&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html#ae0dce375a45959da6c75fec3ede46fea">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
+<li>products_str&#160;:&#160;<a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html#af1b1d3b0308d965ef0697b247fcf9082">gridfire::reaclib::ReactionRecord</a></li>
+<li>protonMassG&#160;:&#160;<a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1constants.html#abdb3124f6ef5ea294f402d30717fa208">gridfire::rates::weak::WeakReaction::constants</a></li>
+<li>protonMassMeV&#160;:&#160;<a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_1_1constants.html#a8a780d3937e60794f007ec65fe866a56">gridfire::rates::weak::WeakReaction::constants</a></li>
 </ul>
 </div><!-- contents -->
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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@@ -27,7 +29,7 @@
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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 <div id="doc-content">
@@ -95,17 +102,19 @@ $(document).ready(function(){initNavTree('functions_vars_q.html',''); initResiza
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-<li>qValue&#160;:&#160;<a class="el" href="structgridfire_1_1reaclib_1_1ReactionRecord.html#aeeb8a1e078a27420e398663825cce644">gridfire::reaclib::ReactionRecord</a></li>
+<li>qse_groups&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a617d7bcbc77a8004fd75a35bf1bdad45">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>qse_solve_species&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html#aac144e8d23e08c3578b3e36ade594f70">gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData</a></li>
+<li>qse_solve_species_index_map&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html#a1aca1d483f9a0ef647238b79db860f23">gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData</a></li>
+<li>qse_solvers&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ab0a22916cd4f6c18f303558efe077aff">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></li>
+<li>queryValue&#160;:&#160;<a class="el" href="structgridfire_1_1rates_1_1weak_1_1_bounds_error_info.html#a3eb0be2063f7333994a026a569ae5568">gridfire::rates::weak::BoundsErrorInfo</a></li>
+<li>qValue&#160;:&#160;<a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html#aeeb8a1e078a27420e398663825cce644">gridfire::reaclib::ReactionRecord</a></li>
 </ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
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@@ -27,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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 <!-- end header part -->
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+<!-- Generated by Doxygen 1.13.2 -->
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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-<li>reactionContributions&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1StepDerivatives.html#ac269799f25d23045bf60dd27376d4337">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
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+<li>reactant_powers&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html#a4360de7e2c518db798d97dac87bea252">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
+<li>reactants_str&#160;:&#160;<a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html#a67afc513db8dbcc43d79733e22ca8d39">gridfire::reaclib::ReactionRecord</a></li>
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+<li>reaction_index_map&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a95b8528f60ca591bb9d8833e68cd6924">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></li>
+<li>reaction_type&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html#aad61f7b0e307ef79e69833a04a857b30">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
+<li>reactionContributionMap&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ae2c64bfc1ae2ca7eeb59ba42b1d93c16">gridfire::solver::PointSolverTimestepContext</a></li>
+<li>reactionContributions&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html#a6fe60255a07ec56ea4db49cbc3f03c65">gridfire::engine::StepDerivatives&lt; T &gt;</a></li>
+<li>reactionPtr&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html#a10984b31880df00b0d78d76f55c0b143">gridfire::engine::AdaptiveEngineView::ReactionFlow</a></li>
+<li>rel_tol&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#afac00ebe1c8bdea292cebf8b377e8181">gridfire::solver::PointSolverContext</a></li>
+<li>relativeCullingThreshold&#160;:&#160;<a class="el" href="structgridfire_1_1config_1_1_adaptive_engine_view_config.html#af2a3b7cc7a0475853dfcae401702f6fb">gridfire::config::AdaptiveEngineViewConfig</a></li>
+<li>relativeThreshold&#160;:&#160;<a class="el" href="structgridfire_1_1config_1_1_boundary_flux_config.html#a835ab5b530f90a686e273a2933b1007f">gridfire::config::BoundaryFluxConfig</a></li>
+<li>relTol&#160;:&#160;<a class="el" href="structgridfire_1_1config_1_1_point_solver_config.html#ada6489cf79ba825a7870bd84ee99f150">gridfire::config::PointSolverConfig</a></li>
+<li>reverse&#160;:&#160;<a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html#aa1fd4f510d7c00d2e4197e9b9caf29fd">gridfire::reaclib::ReactionRecord</a></li>
+<li>reverse_symmetry_factor&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html#ae70bcf64f86170160d837abd5bdce873">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
+<li>rho&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html#a7ff42828a485eabd21811a9775eb4d3c">gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html#a2eb3a8c09b537971bd6818df3e86ea23">gridfire::solver::PointSolver::CVODEUserData</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a7c4618a9939276f502f18faebd4cbda8">gridfire::solver::PointSolverTimestepContext</a></li>
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+<li>rhsADFun&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af484620a6c7022af3e0775bfa2568f79">gridfire::engine::scratch::GraphEngineScratchPad</a></li>
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+<li>scratchpads&#160;:&#160;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a386785b28d25459a616812281bb2ced5">gridfire::engine::scratch::StateBlob</a></li>
+<li>sctx&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html#a1797578ad8bed04e9a7e3f44fa49e532">gridfire::solver::PointSolver::CVODEUserData</a></li>
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+<li>solver&#160;:&#160;<a class="el" href="struct_g_f_grid_context.html#a92cf3bc0d148eda660cccce86bffedc3">GFGridContext</a>, <a class="el" href="struct_g_f_point_context.html#a05d85e0dc718ba0c8854e831a574f6ac">GFPointContext</a>, <a class="el" href="structgridfire_1_1config_1_1_grid_fire_config.html#add0dd0d5de97c55d8077558fdcf7f7b3">gridfire::config::GridFireConfig</a></li>
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+<li>speciesList&#160;:&#160;<a class="el" href="struct_g_f_context.html#ad65d2f34696aa6368a49768fc5c0ebf7">GFContext</a></li>
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+<li>state&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ae0cc0270ead108365f0345c94f97f175">gridfire::solver::PointSolverTimestepContext</a></li>
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+<li>status&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_priming_report.html#ac3e0c141e56c7bc41dd89d5fc873fa41">gridfire::engine::PrimingReport</a></li>
+<li>stdout_logging&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a3a342362afef5d3075e688ea7d0a68f1">gridfire::solver::PointSolverContext</a></li>
+<li>stepDerivativesCache&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#abcadc5999eabeb91cc45887323da5cc1">gridfire::engine::scratch::GraphEngineScratchPad</a></li>
+<li>stoichiometric_coefficients&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html#a333e30364947d83549b20d857641d646">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
+<li>success&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_priming_report.html#a68aa5f346f5d9d598bf921e175c49239">gridfire::engine::PrimingReport</a></li>
+<li>sun_ctx&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a735335d563bb612f19b531107c89fab6">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a71ae0bd5dc85e83adc602a13fdf6bf3a">gridfire::solver::PointSolverContext</a></li>
+<li>symmetry_factor&#160;:&#160;<a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html#aa4ae79e03a28fd221759ea93bda389d5">gridfire::engine::GraphEngine::PrecomputedReaction</a></li>
 </ul>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+<script type="text/javascript">
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+<code>#include &quot;<a class="el" href="mesa_8h.html">gridfire/io/generative/mesa.h</a>&quot;</code><br />
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 Include dependency graph for generative.h:</div>
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diff --git a/docs/html/generative_8h__incl.map b/docs/html/generative_8h__incl.map
index 44b68265..e49b2eac 100644
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+<li>MULTI_ZONE&#160;:&#160;<a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42dad797211cef0edf4e738cf9e846a5b70d">gridfire_extern.h</a></li>
+</ul>
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+<li>register_rauscher_thielemann_partition_bindings()&#160;:&#160;<a class="el" href="partition_2bindings_8cpp.html#ae1665331725ff38c39d7d3eec551ec97">bindings.cpp</a>, <a class="el" href="partition_2bindings_8h.html#ae1665331725ff38c39d7d3eec551ec97">bindings.h</a></li>
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+<li>register_scratchpad_bindings()&#160;:&#160;<a class="el" href="engine_2scratchpads_2bindings_8cpp.html#a1c0aacdc11f84e83e529570c0d39d7f1">bindings.cpp</a>, <a class="el" href="engine_2scratchpads_2bindings_8h.html#a1c0aacdc11f84e83e529570c0d39d7f1">bindings.h</a></li>
+<li>register_scratchpad_types_bindings()&#160;:&#160;<a class="el" href="engine_2scratchpads_2bindings_8cpp.html#aadffe4d320abb855f40bc794e865f074">bindings.cpp</a>, <a class="el" href="engine_2scratchpads_2bindings_8h.html#a8239b869218ca4dbd02ea6bcdbdec866">bindings.h</a></li>
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+<li>register_state_blob_bindings()&#160;:&#160;<a class="el" href="engine_2scratchpads_2bindings_8cpp.html#a72817faf7d4c35548257bf50463d0a69">bindings.cpp</a>, <a class="el" href="engine_2scratchpads_2bindings_8h.html#a72817faf7d4c35548257bf50463d0a69">bindings.h</a></li>
 <li>register_type_bindings()&#160;:&#160;<a class="el" href="types_2bindings_8cpp.html#aa0589677938fad59ffce3f6981f53ff0">bindings.cpp</a>, <a class="el" href="types_2bindings_8h.html#aa0589677938fad59ffce3f6981f53ff0">bindings.h</a></li>
 <li>register_utils_bindings()&#160;:&#160;<a class="el" href="utils_2bindings_8cpp.html#a7af842f50ca4a721518e716d0229697c">bindings.cpp</a>, <a class="el" href="utils_2bindings_8h.html#a9eefca377142320755a869fafc6311c7">bindings.h</a></li>
 </ul>
+
+
+<h3><a id="index_s" name="index_s"></a>- s -</h3><ul>
+<li>SINGLE_ZONE&#160;:&#160;<a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42da458c9dcd06d6bf0c8d6e3764725cad5e">gridfire_extern.h</a></li>
+</ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/globals_defs.html b/docs/html/globals_defs.html
index 4c313407..9d74017d 100644
--- a/docs/html/globals_defs.html
+++ b/docs/html/globals_defs.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: File Members</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('globals_defs.html',''); initResizable(); });
+$(function(){initNavTree('globals_defs.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
@@ -93,6 +100,10 @@ $(document).ready(function(){initNavTree('globals_defs.html',''); initResizable(
 
 <div class="contents">
 <div class="textblock">Here is a list of all macros with links to the files they belong to:</div><ul>
+<li>GF_OMP&#160;:&#160;<a class="el" href="macros_8h.html#a8ae8e37e04e8e83bd093ac1e20a791d8">macros.h</a></li>
+<li>GF_OMP_MAX_THREADS&#160;:&#160;<a class="el" href="macros_8h.html#a999b39e46bbc1806fb58d1ce069f378f">macros.h</a></li>
+<li>GF_OMP_THREAD_NUM&#160;:&#160;<a class="el" href="macros_8h.html#a7841b2d58d83626b304a6836a7b669fd">macros.h</a></li>
+<li>GF_PAR_INIT&#160;:&#160;<a class="el" href="gf__omp_8h.html#aeed3089bf5385678acce5c49c672102c">gf_omp.h</a></li>
 <li>GRIDFIRE_WEAK_REACTION_LIB_SENTINEL&#160;:&#160;<a class="el" href="weak_8h.html#a56d76d6c9aef1e09f707c836a157ff27">weak.h</a></li>
 </ul>
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@@ -100,7 +111,7 @@ $(document).ready(function(){initNavTree('globals_defs.html',''); initResizable(
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
 </div>
 </body>
diff --git a/docs/html/globals_enum.html b/docs/html/globals_enum.html
index bde7a5b0..4c0a44b9 100644
--- a/docs/html/globals_enum.html
+++ b/docs/html/globals_enum.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: File Members</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
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-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
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-$(document).ready(function(){initNavTree('globals_enum.html',''); initResizable(); });
+$(function(){initNavTree('globals_enum.html',''); initResizable(true); });
 /* @license-end */
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 <div id="doc-content">
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+<li>GF_TYPE&#160;:&#160;<a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42d">gridfire_extern.h</a></li>
+<li>GFContextType&#160;:&#160;<a class="el" href="gridfire__context_8h.html#a6ea78d58fa871fd32d9a111e8ea81feb">gridfire_context.h</a></li>
 </ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/globals_eval.html b/docs/html/globals_eval.html
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--- a/docs/html/globals_eval.html
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 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: File Members</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
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 <li>register_reaction_bindings()&#160;:&#160;<a class="el" href="reaction_2bindings_8cpp.html#ae174b115814ec42920a799881cef1efa">bindings.cpp</a>, <a class="el" href="reaction_2bindings_8h.html#a221d509fd54278898e2cbb73663f53d0">bindings.h</a></li>
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+<li>register_scratchpad_bindings()&#160;:&#160;<a class="el" href="engine_2scratchpads_2bindings_8cpp.html#a1c0aacdc11f84e83e529570c0d39d7f1">bindings.cpp</a>, <a class="el" href="engine_2scratchpads_2bindings_8h.html#a1c0aacdc11f84e83e529570c0d39d7f1">bindings.h</a></li>
+<li>register_scratchpad_types_bindings()&#160;:&#160;<a class="el" href="engine_2scratchpads_2bindings_8cpp.html#aadffe4d320abb855f40bc794e865f074">bindings.cpp</a>, <a class="el" href="engine_2scratchpads_2bindings_8h.html#a8239b869218ca4dbd02ea6bcdbdec866">bindings.h</a></li>
 <li>register_screening_bindings()&#160;:&#160;<a class="el" href="screening_2bindings_8cpp.html#a4fcef69d9382bfbc315cb061038627f4">bindings.cpp</a>, <a class="el" href="screening_2bindings_8h.html#a9e1a938ffee0a1b9d913fa4968865b1b">bindings.h</a></li>
 <li>register_solver_bindings()&#160;:&#160;<a class="el" href="solver_2bindings_8cpp.html#a722d28831d82cd075081fcf4b403479d">bindings.cpp</a>, <a class="el" href="solver_2bindings_8h.html#a7ff40d9e08fcb5028e914045447d46d3">bindings.h</a></li>
+<li>register_state_blob_bindings()&#160;:&#160;<a class="el" href="engine_2scratchpads_2bindings_8cpp.html#a72817faf7d4c35548257bf50463d0a69">bindings.cpp</a>, <a class="el" href="engine_2scratchpads_2bindings_8h.html#a72817faf7d4c35548257bf50463d0a69">bindings.h</a></li>
 <li>register_type_bindings()&#160;:&#160;<a class="el" href="types_2bindings_8cpp.html#aa0589677938fad59ffce3f6981f53ff0">bindings.cpp</a>, <a class="el" href="types_2bindings_8h.html#aa0589677938fad59ffce3f6981f53ff0">bindings.h</a></li>
 <li>register_utils_bindings()&#160;:&#160;<a class="el" href="utils_2bindings_8cpp.html#a7af842f50ca4a721518e716d0229697c">bindings.cpp</a>, <a class="el" href="utils_2bindings_8h.html#a9eefca377142320755a869fafc6311c7">bindings.h</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/globals_type.html b/docs/html/globals_type.html
index 8d150415..203a786d 100644
--- a/docs/html/globals_type.html
+++ b/docs/html/globals_type.html
@@ -3,16 +3,18 @@
 <head>
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 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
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 <title>GridFire: File Members</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('globals_type.html',''); initResizable(); });
+$(function(){initNavTree('globals_type.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
@@ -100,7 +107,7 @@ $(document).ready(function(){initNavTree('globals_type.html',''); initResizable(
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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 </body>
diff --git a/docs/html/globals_vars.html b/docs/html/globals_vars.html
index fde6e034..37112f94 100644
--- a/docs/html/globals_vars.html
+++ b/docs/html/globals_vars.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: File Members</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('globals_vars.html',''); initResizable(); });
+$(function(){initNavTree('globals_vars.html',''); initResizable(true); });
 /* @license-end */
 </script>
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@@ -103,7 +110,7 @@ $(document).ready(function(){initNavTree('globals_vars.html',''); initResizable(
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 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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 </body>
diff --git a/docs/html/graph_legend.html b/docs/html/graph_legend.html
index 14a58d11..d30bf6cd 100644
--- a/docs/html/graph_legend.html
+++ b/docs/html/graph_legend.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Graph Legend</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
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+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('graph_legend.html',''); initResizable(); });
+$(function(){initNavTree('graph_legend.html',''); initResizable(true); });
 /* @license-end */
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 <div id="doc-content">
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+A purple dashed arrow is used if a class is contained or used by another class. The arrow is labeled with the variable(s) through which the pointed class or struct is accessible. </li>
 <li>
-A yellow dashed arrow denotes a relation between a template instance and the template class it was instantiated from. The arrow is labelled with the template parameters of the instance. </li>
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 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/gridfire_8h.html b/docs/html/gridfire_8h.html
index 55316402..dc948069 100644
--- a/docs/html/gridfire_8h.html
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@@ -3,16 +3,18 @@
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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+<!-- Generated by Doxygen 1.13.2 -->
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 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
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-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
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 <script type="text/javascript">
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-$(document).ready(function(){initNavTree('gridfire_8h.html',''); initResizable(); });
+$(function(){initNavTree('gridfire_8h.html',''); initResizable(true); });
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-<code>#include &quot;<a class="el" href="types_8h.html">types/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="utils_2utils_8h.html">gridfire/utils/utils.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="types_2types_8h.html">gridfire/types/types.h</a>&quot;</code><br />
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   <div class="headertitle"><div class="title">gridfire_context.cpp File Reference</div></div>
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 <div class="textblock"><code>#include &quot;<a class="el" href="gridfire__context_8h.html">gridfire/extern/gridfire_context.h</a>&quot;</code><br />
 <code>#include &quot;fourdst/atomic/species.h&quot;</code><br />
 <code>#include &quot;fourdst/composition/exceptions/exceptions_composition.h&quot;</code><br />
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+          <td class="paramtype">const <a class="el" href="gridfire__context_8h.html#a6ea78d58fa871fd32d9a111e8ea81feb">GFContextType</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>type</em></span></td><td>)</td>
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+<title>Node62&#45;&gt;Node12</title>
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+<title>Node96&#45;&gt;Node44</title>
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+<text xml:space="preserve" text-anchor="middle" x="1303" y="-61" font-family="Helvetica,sans-Serif" font-size="10.00">/partition_types.h</text>
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+<g id="edge67_Node000096_Node000098" class="edge">
+<title>Node96&#45;&gt;Node98</title>
+<g id="a_edge67_Node000096_Node000098"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1279.59,-200.55C1311.46,-190.43 1356.51,-176.11 1396,-163.5 1397.81,-162.92 1399.66,-162.33 1401.52,-161.74"/>
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+<!-- Node99 -->
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+<text xml:space="preserve" text-anchor="start" x="1007.88" y="-138.75" font-family="Helvetica,sans-Serif" font-size="10.00">/partition_rauscher</text>
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+</g>
+<!-- Node96&#45;&gt;Node99 -->
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+<title>Node96&#45;&gt;Node99</title>
+<g id="a_edge73_Node000096_Node000099"><a xlink:title=" ">
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+<!-- Node100 -->
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+<!-- Node96&#45;&gt;Node100 -->
+<g id="edge78_Node000096_Node000100" class="edge">
+<title>Node96&#45;&gt;Node100</title>
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+<!-- Node101 -->
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+<!-- Node96&#45;&gt;Node101 -->
+<g id="edge79_Node000096_Node000101" class="edge">
+<title>Node96&#45;&gt;Node101</title>
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+<!-- Node97&#45;&gt;Node11 -->
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+<!-- Node98&#45;&gt;Node9 -->
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+<!-- Node98&#45;&gt;Node10 -->
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+<title>Node98&#45;&gt;Node10</title>
+<g id="a_edge72_Node000098_Node000010"><a xlink:title=" ">
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+<!-- Node98&#45;&gt;Node11 -->
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+<!-- Node98&#45;&gt;Node44 -->
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+<!-- Node98&#45;&gt;Node19 -->
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 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
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 <h2 class="groupheader">Function Documentation</h2>
@@ -136,39 +151,30 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">int gf_construct_engine_from_policy </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const char *&#160;</td>
-          <td class="paramname"><em>policy_name</em>, </td>
+          <td class="paramtype">const char *</td>          <td class="paramname"><span class="paramname"><em>policy_name</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double *&#160;</td>
-          <td class="paramname"><em>abundances</em>, </td>
+          <td class="paramtype">const double *</td>          <td class="paramname"><span class="paramname"><em>abundances</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const size_t&#160;</td>
-          <td class="paramname"><em>num_species</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>&#160;)</td>
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+<a id="aed17ad088b2c25c0c2bf5549527e53fd" name="aed17ad088b2c25c0c2bf5549527e53fd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aed17ad088b2c25c0c2bf5549527e53fd">&#9670;&#160;</a></span>gf_construct_solver_from_engine()</h2>
 
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           <td class="memname">int gf_construct_solver_from_engine </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span></td><td>)</td>
           <td></td>
-          <td class="paramtype">const char *&#160;</td>
-          <td class="paramname"><em>solver_name</em>&#160;</td>
-        </tr>
-        <tr>
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@@ -204,8 +199,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">char * gf_error_code_to_string </td>
           <td>(</td>
-          <td class="paramtype">const int&#160;</td>
-          <td class="paramname"><em>error_code</em></td><td>)</td>
+          <td class="paramtype">const int</td>          <td class="paramname"><span class="paramname"><em>error_code</em></span></td><td>)</td>
           <td></td>
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 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#a931b9433b2d99c12753bf65bd7332f19">&#9670;&#160;</a></span>gf_evolve()</h2>
+<a id="a9b8f950c57fe06a352002f1b52b0f59f" name="a9b8f950c57fe06a352002f1b52b0f59f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9b8f950c57fe06a352002f1b52b0f59f">&#9670;&#160;</a></span>gf_evolve()</h2>
 
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@@ -222,109 +216,98 @@ Functions</h2></td></tr>
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           <td class="memname">int gf_evolve </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
+          <td class="paramtype">const enum <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double *&#160;</td>
-          <td class="paramname"><em>Y_in</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const size_t&#160;</td>
-          <td class="paramname"><em>num_species</em>, </td>
+          <td class="paramtype">const void *</td>          <td class="paramname"><span class="paramname"><em>Y_in</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double&#160;</td>
-          <td class="paramname"><em>T</em>, </td>
+          <td class="paramtype">const size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double&#160;</td>
-          <td class="paramname"><em>rho</em>, </td>
+          <td class="paramtype">const void *</td>          <td class="paramname"><span class="paramname"><em>T</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double&#160;</td>
-          <td class="paramname"><em>tMax</em>, </td>
+          <td class="paramtype">const void *</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double&#160;</td>
-          <td class="paramname"><em>dt0</em>, </td>
+          <td class="paramtype">const double</td>          <td class="paramname"><span class="paramname"><em>tMax</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>Y_out</em>, </td>
+          <td class="paramtype">const double</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>energy_out</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>Y_out</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>dEps_dT</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>energy_out</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>dEps_dRho</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>dEps_dT</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>specific_neutrino_energy_loss</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>dEps_dRho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>specific_neutrino_flux</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>specific_neutrino_energy_loss</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>mass_lost</em>&#160;</td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>specific_neutrino_flux</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>&#160;)</td>
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-<h2 class="memtitle"><span class="permalink"><a href="#a5ddf1a13fef574a435fd76a7fb1bb374">&#9670;&#160;</a></span>gf_free()</h2>
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 <div class="memitem">
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       <table class="memname">
         <tr>
-          <td class="memname">void gf_free </td>
+          <td class="memname">int gf_free </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ctx</em></td><td>)</td>
+          <td class="paramtype">const enum <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;)</td>
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@@ -340,8 +323,7 @@ Functions</h2></td></tr>
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           <td>(</td>
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-, <a class="el" href="gridfire__extern_8h.html#a94348e7f89768e5dbe4b60018a4af040a6d4b28ab0fea21400884aa3b92094274">FDSSE_COMPOSITION_ERROR</a> = 103
+&#160;&#160;<a class="el" href="#a94348e7f89768e5dbe4b60018a4af040a66249e99adfe5b4cddfb37f6541d9dd6">FDSSE_SPECIES_ERROR</a> = 101
+, <a class="el" href="#a94348e7f89768e5dbe4b60018a4af040a48fd73b0abbfb72296db39fb4f70f5ec">FDSSE_INVALID_COMPOSITION_ERROR</a> = 102
+, <a class="el" href="#a94348e7f89768e5dbe4b60018a4af040a6d4b28ab0fea21400884aa3b92094274">FDSSE_COMPOSITION_ERROR</a> = 103
 <br />
  }</td></tr>
 <tr class="separator:a94348e7f89768e5dbe4b60018a4af040"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a356f381bb83c032241c5cdab44a5d828" id="r_a356f381bb83c032241c5cdab44a5d828"><td class="memItemLeft" align="right" valign="top">enum &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828">GF_ERROR_CODES</a> { <br />
-&#160;&#160;<a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a5acdc23f4b748dfc1579bb74ba8e3119">GF_NON_GRIDFIRE_ERROR</a> = -2
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828aad2b78135fd3cef8251128c37f7e5c40">GF_UNKNOWN_ERROR</a> = -1
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a966ff3fc3c67deead4ad1e7b249e46f9">GF_SUCCESS</a> = 0
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828ab4647efcd565a691e9029d8bf0b47046">GF_INVALID_QSE_SOLUTION_ERROR</a> = 5
+<tr class="memitem:a356f381bb83c032241c5cdab44a5d828" id="r_a356f381bb83c032241c5cdab44a5d828"><td class="memItemLeft" align="right" valign="top">enum &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a356f381bb83c032241c5cdab44a5d828">GF_ERROR_CODES</a> { <br />
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828a5acdc23f4b748dfc1579bb74ba8e3119">GF_NON_GRIDFIRE_ERROR</a> = -2
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828aad2b78135fd3cef8251128c37f7e5c40">GF_UNKNOWN_ERROR</a> = -1
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a966ff3fc3c67deead4ad1e7b249e46f9">GF_SUCCESS</a> = 0
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828ab4647efcd565a691e9029d8bf0b47046">GF_INVALID_QSE_SOLUTION_ERROR</a> = 5
 , <br />
-&#160;&#160;<a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a35e79ae122cbd41c7042749ec7c027e2">GF_FAILED_TO_PARTITION_ENGINE_ERROR</a> = 6
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a76e59391de30bf8afa8c654bb12feb69">GF_NETWORK_RESIZED_ERROR</a> = 7
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a28ff670a229bb4d879552801f9015758">GF_UNABLE_TO_SET_NETWORK_REACTIONS_ERROR</a> = 8
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a2377d6d81096937ed4fc02fd3b547f45">GF_BAD_COLLECTION_ERROR</a> = 9
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828a35e79ae122cbd41c7042749ec7c027e2">GF_FAILED_TO_PARTITION_ENGINE_ERROR</a> = 6
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a76e59391de30bf8afa8c654bb12feb69">GF_NETWORK_RESIZED_ERROR</a> = 7
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a28ff670a229bb4d879552801f9015758">GF_UNABLE_TO_SET_NETWORK_REACTIONS_ERROR</a> = 8
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a2377d6d81096937ed4fc02fd3b547f45">GF_BAD_COLLECTION_ERROR</a> = 9
 , <br />
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-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a7b0e6c03c7dbbb7e9470563aeb0db842">GF_STALE_JACOBIAN_ERROR</a> = 11
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a998d65fc71a92f377498ef7537ac0212">GF_UNINITIALIZED_JACOBIAN_ERROR</a> = 12
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a48dbc7f62dc60d8cd4bfb925c039f028">GF_UNKNOWN_JACOBIAN_ERROR</a> = 13
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828ad389966bfffb34408ed2e2f8e506d567">GF_BAD_RHS_ENGINE_ERROR</a> = 10
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a7b0e6c03c7dbbb7e9470563aeb0db842">GF_STALE_JACOBIAN_ERROR</a> = 11
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a998d65fc71a92f377498ef7537ac0212">GF_UNINITIALIZED_JACOBIAN_ERROR</a> = 12
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a48dbc7f62dc60d8cd4bfb925c039f028">GF_UNKNOWN_JACOBIAN_ERROR</a> = 13
 , <br />
-&#160;&#160;<a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a35ddf5ec93ac14ae4bb6c15136958af0">GF_JACOBIAN_ERROR</a> = 14
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828ac8b987908b121b282b6a970493c53d9a">GF_ENGINE_ERROR</a> = 15
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a2b0b126d30f2504f2f3aeb101b7856aa">GF_MISSING_BASE_REACTION_ERROR</a> = 16
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a4c64ce0edc9df9a12b7eb3e86842acb4">GF_MISSING_SEED_SPECIES_ERROR</a> = 17
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828a35ddf5ec93ac14ae4bb6c15136958af0">GF_JACOBIAN_ERROR</a> = 14
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828ac8b987908b121b282b6a970493c53d9a">GF_ENGINE_ERROR</a> = 15
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a2b0b126d30f2504f2f3aeb101b7856aa">GF_MISSING_BASE_REACTION_ERROR</a> = 16
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a4c64ce0edc9df9a12b7eb3e86842acb4">GF_MISSING_SEED_SPECIES_ERROR</a> = 17
 , <br />
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-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a2200c512266154c94cb12e535043a4d4">GF_POLICY_ERROR</a> = 19
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a2a58eeed96e3b31a23733a43bc96aace">GF_REACTION_PARSING_ERROR</a> = 20
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a1a5ad34aeb15eaf4dca51f81bc7a4fed">GF_REACTION_ERROR</a> = 21
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828ae47f8bc2eb22a77ac95993b2baa37c35">GF_MISSING_KEY_REACTION_ERROR</a> = 18
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a2200c512266154c94cb12e535043a4d4">GF_POLICY_ERROR</a> = 19
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a2a58eeed96e3b31a23733a43bc96aace">GF_REACTION_PARSING_ERROR</a> = 20
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a1a5ad34aeb15eaf4dca51f81bc7a4fed">GF_REACTION_ERROR</a> = 21
 , <br />
-&#160;&#160;<a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a7188c09db61a3f8dc1824363b7b30708">GF_SINGULAR_JACOBIAN_ERROR</a> = 22
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a96bc6c2c47cfdc396eb2f6bde285943b">GF_ILL_CONDITIONED_JACOBIAN_ERROR</a> = 23
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a9d671ac538c996be0202e6525ad1c2ca">GF_CVODE_SOLVER_FAILURE_ERROR</a> = 24
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a8e1a8eb541be83ef7071fcbca3a144ca">GF_KINSOL_SOLVER_FAILURE_ERROR</a> = 25
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828a7188c09db61a3f8dc1824363b7b30708">GF_SINGULAR_JACOBIAN_ERROR</a> = 22
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a96bc6c2c47cfdc396eb2f6bde285943b">GF_ILL_CONDITIONED_JACOBIAN_ERROR</a> = 23
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a9d671ac538c996be0202e6525ad1c2ca">GF_CVODE_SOLVER_FAILURE_ERROR</a> = 24
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a8e1a8eb541be83ef7071fcbca3a144ca">GF_KINSOL_SOLVER_FAILURE_ERROR</a> = 25
 , <br />
-&#160;&#160;<a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828ac21a70b23fa7c60b866d11b6c60ba366">GF_SUNDIALS_ERROR</a> = 26
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828ac42076a26785008b8618ec715976ff35">GF_SOLVER_ERROR</a> = 27
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a9a57ef6d36fcf8961b5a113673cf9087">GF_HASHING_ERROR</a> = 28
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828aed54d3f628971ab1bc7713a82bc834c3">GF_UTILITY_ERROR</a> = 29
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828ac21a70b23fa7c60b866d11b6c60ba366">GF_SUNDIALS_ERROR</a> = 26
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828ac42076a26785008b8618ec715976ff35">GF_SOLVER_ERROR</a> = 27
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a9a57ef6d36fcf8961b5a113673cf9087">GF_HASHING_ERROR</a> = 28
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828aed54d3f628971ab1bc7713a82bc834c3">GF_UTILITY_ERROR</a> = 29
 , <br />
-&#160;&#160;<a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a6ad462fe6e7b47aa4d77eda129dbe799">GF_DEBUG_ERROR</a> = 30
-, <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828a63ccd4c867da53dd7b01673b295f8523">GF_GRIDFIRE_ERROR</a> = 31
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828a6ad462fe6e7b47aa4d77eda129dbe799">GF_DEBUG_ERROR</a> = 30
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a63ccd4c867da53dd7b01673b295f8523">GF_GRIDFIRE_ERROR</a> = 31
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a325ae15214e3cfa068b67e39343619bf">GF_UNINITIALIZED_INPUT_MEMORY_ERROR</a> = 32
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a24c2791f490c26fc6c56fc54d4fb659a">GF_UNINITIALIZED_OUTPUT_MEMORY_ERROR</a> = 33
+, <br />
+&#160;&#160;<a class="el" href="#a356f381bb83c032241c5cdab44a5d828a2ea660d6f401acd8d088d0f1eec3009d">GF_INVALID_NUM_SPECIES</a> = 34
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828a370a59544c9149a2cb8e68d2ef0a6704">GF_INVALID_TIMESTEPS</a> = 35
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828aab79067da1d23257067b79d683a9e5e0">GF_UNKNOWN_FREE_TYPE</a> = 36
+, <a class="el" href="#a356f381bb83c032241c5cdab44a5d828ad4b502b385ec0751273cb37b0604b031">GF_INVALID_TYPE</a> = 37
 <br />
  }</td></tr>
 <tr class="separator:a356f381bb83c032241c5cdab44a5d828"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
-<tr class="memitem:a851d8c23bdc73852988b870c5f409639" id="r_a851d8c23bdc73852988b870c5f409639"><td class="memItemLeft" align="right" valign="top">char *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="gridfire__extern_8h.html#a851d8c23bdc73852988b870c5f409639">gf_get_last_error_message</a> (void *ptr)</td></tr>
+<tr class="memitem:a851d8c23bdc73852988b870c5f409639" id="r_a851d8c23bdc73852988b870c5f409639"><td class="memItemLeft" align="right" valign="top">char *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a851d8c23bdc73852988b870c5f409639">gf_get_last_error_message</a> (void *ptr)</td></tr>
 <tr class="separator:a851d8c23bdc73852988b870c5f409639"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:ac7089c7bad97d0ffe7c9445dcd0258f2" id="r_ac7089c7bad97d0ffe7c9445dcd0258f2"><td class="memItemLeft" align="right" valign="top">char *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac7089c7bad97d0ffe7c9445dcd0258f2">gf_error_code_to_string</a> (int error_code)</td></tr>
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-<tr class="separator:aa06d49e737afd147061f4f15e6e5afcc"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="separator:a5ddf1a13fef574a435fd76a7fb1bb374"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:af7e09bf5cf979211260e715faaa3a680" id="r_af7e09bf5cf979211260e715faaa3a680"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="gridfire__extern_8h.html#af7e09bf5cf979211260e715faaa3a680">gf_register_species</a> (void *ptr, const int num_species, const char **species_names)</td></tr>
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+<tr class="separator:a0d42f6060caa8e73b2ef36f591a12034"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a1a963d1279164f2a870be4e9e1dba1d5" id="r_a1a963d1279164f2a870be4e9e1dba1d5"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1a963d1279164f2a870be4e9e1dba1d5">gf_free</a> (const enum <a class="el" href="#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a> type, void *ctx)</td></tr>
+<tr class="separator:a1a963d1279164f2a870be4e9e1dba1d5"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a541a743ca349b42f627a357dff5a7d18"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af7e09bf5cf979211260e715faaa3a680" id="r_af7e09bf5cf979211260e715faaa3a680"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af7e09bf5cf979211260e715faaa3a680">gf_register_species</a> (void *ptr, const int num_species, const char **species_names)</td></tr>
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-<tr class="separator:abde0ca38a62727d2f76f0bcd920bf124"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aed17ad088b2c25c0c2bf5549527e53fd" id="r_aed17ad088b2c25c0c2bf5549527e53fd"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aed17ad088b2c25c0c2bf5549527e53fd">gf_construct_solver_from_engine</a> (void *ptr)</td></tr>
+<tr class="separator:aed17ad088b2c25c0c2bf5549527e53fd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a807dc807fea7c92f328849aea7572af4" id="r_a807dc807fea7c92f328849aea7572af4"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a807dc807fea7c92f328849aea7572af4">gf_evolve</a> (enum <a class="el" href="#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a> type, void *ptr, const void *Y_in, size_t num_species, const void *T, const void *rho, double tMax, double dt0, void *Y_out, void *energy_out, void *dEps_dT, void *dEps_dRho, void *specific_neutrino_energy_loss, void *specific_neutrino_flux, void *mass_lost)</td></tr>
+<tr class="separator:a807dc807fea7c92f328849aea7572af4"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Enumeration Type Documentation</h2>
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-          <td class="memname">enum <a class="el" href="gridfire__extern_8h.html#a94348e7f89768e5dbe4b60018a4af040">FDSSE_ERROR_CODES</a></td>
+          <td class="memname">enum <a class="el" href="#a94348e7f89768e5dbe4b60018a4af040">FDSSE_ERROR_CODES</a></td>
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-          <td class="memname">enum <a class="el" href="gridfire__extern_8h.html#a356f381bb83c032241c5cdab44a5d828">GF_ERROR_CODES</a></td>
+          <td class="memname">enum <a class="el" href="#a356f381bb83c032241c5cdab44a5d828">GF_ERROR_CODES</a></td>
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+<tr><td class="fieldname"><a id="a356f381bb83c032241c5cdab44a5d828a325ae15214e3cfa068b67e39343619bf" name="a356f381bb83c032241c5cdab44a5d828a325ae15214e3cfa068b67e39343619bf"></a>GF_UNINITIALIZED_INPUT_MEMORY_ERROR&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a356f381bb83c032241c5cdab44a5d828a24c2791f490c26fc6c56fc54d4fb659a" name="a356f381bb83c032241c5cdab44a5d828a24c2791f490c26fc6c56fc54d4fb659a"></a>GF_UNINITIALIZED_OUTPUT_MEMORY_ERROR&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a356f381bb83c032241c5cdab44a5d828a2ea660d6f401acd8d088d0f1eec3009d" name="a356f381bb83c032241c5cdab44a5d828a2ea660d6f401acd8d088d0f1eec3009d"></a>GF_INVALID_NUM_SPECIES&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a356f381bb83c032241c5cdab44a5d828a370a59544c9149a2cb8e68d2ef0a6704" name="a356f381bb83c032241c5cdab44a5d828a370a59544c9149a2cb8e68d2ef0a6704"></a>GF_INVALID_TIMESTEPS&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a356f381bb83c032241c5cdab44a5d828aab79067da1d23257067b79d683a9e5e0" name="a356f381bb83c032241c5cdab44a5d828aab79067da1d23257067b79d683a9e5e0"></a>GF_UNKNOWN_FREE_TYPE&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a356f381bb83c032241c5cdab44a5d828ad4b502b385ec0751273cb37b0604b031" name="a356f381bb83c032241c5cdab44a5d828ad4b502b385ec0751273cb37b0604b031"></a>GF_INVALID_TYPE&#160;</td><td class="fielddoc"></td></tr>
+</table>
+
+</div>
+</div>
+<a id="aef130f2ece7c95a5d172559febbbd42d" name="aef130f2ece7c95a5d172559febbbd42d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aef130f2ece7c95a5d172559febbbd42d">&#9670;&#160;</a></span>GF_TYPE</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">enum <a class="el" href="#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<table class="fieldtable">
+<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="aef130f2ece7c95a5d172559febbbd42da458c9dcd06d6bf0c8d6e3764725cad5e" name="aef130f2ece7c95a5d172559febbbd42da458c9dcd06d6bf0c8d6e3764725cad5e"></a>SINGLE_ZONE&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="aef130f2ece7c95a5d172559febbbd42dad797211cef0edf4e738cf9e846a5b70d" name="aef130f2ece7c95a5d172559febbbd42dad797211cef0edf4e738cf9e846a5b70d"></a>MULTI_ZONE&#160;</td><td class="fielddoc"></td></tr>
 </table>
 
 </div>
@@ -265,39 +309,30 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">int gf_construct_engine_from_policy </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const char *&#160;</td>
-          <td class="paramname"><em>policy_name</em>, </td>
+          <td class="paramtype">const char *</td>          <td class="paramname"><span class="paramname"><em>policy_name</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double *&#160;</td>
-          <td class="paramname"><em>abundances</em>, </td>
+          <td class="paramtype">const double *</td>          <td class="paramname"><span class="paramname"><em>abundances</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">size_t&#160;</td>
-          <td class="paramname"><em>num_species</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>&#160;)</td>
         </tr>
       </table>
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 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#a57d58696555e3402eddd043cea125f5e">&#9670;&#160;</a></span>gf_construct_solver_from_engine()</h2>
+<a id="aed17ad088b2c25c0c2bf5549527e53fd" name="aed17ad088b2c25c0c2bf5549527e53fd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aed17ad088b2c25c0c2bf5549527e53fd">&#9670;&#160;</a></span>gf_construct_solver_from_engine()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -305,19 +340,8 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">int gf_construct_solver_from_engine </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span></td><td>)</td>
           <td></td>
-          <td class="paramtype">const char *&#160;</td>
-          <td class="paramname"><em>solver_name</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -333,8 +357,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">char * gf_error_code_to_string </td>
           <td>(</td>
-          <td class="paramtype">int&#160;</td>
-          <td class="paramname"><em>error_code</em></td><td>)</td>
+          <td class="paramtype">int</td>          <td class="paramname"><span class="paramname"><em>error_code</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -342,8 +365,8 @@ Functions</h2></td></tr>
 
 </div>
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-<a id="abde0ca38a62727d2f76f0bcd920bf124" name="abde0ca38a62727d2f76f0bcd920bf124"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#abde0ca38a62727d2f76f0bcd920bf124">&#9670;&#160;</a></span>gf_evolve()</h2>
+<a id="a807dc807fea7c92f328849aea7572af4" name="a807dc807fea7c92f328849aea7572af4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a807dc807fea7c92f328849aea7572af4">&#9670;&#160;</a></span>gf_evolve()</h2>
 
 <div class="memitem">
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@@ -351,109 +374,98 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">int gf_evolve </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
+          <td class="paramtype">enum <a class="el" href="#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const double *&#160;</td>
-          <td class="paramname"><em>Y_in</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">size_t&#160;</td>
-          <td class="paramname"><em>num_species</em>, </td>
+          <td class="paramtype">const void *</td>          <td class="paramname"><span class="paramname"><em>Y_in</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>T</em>, </td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>rho</em>, </td>
+          <td class="paramtype">const void *</td>          <td class="paramname"><span class="paramname"><em>T</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>tMax</em>, </td>
+          <td class="paramtype">const void *</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>dt0</em>, </td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>tMax</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>Y_out</em>, </td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>energy_out</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>Y_out</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>dEps_dT</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>energy_out</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>dEps_dRho</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>dEps_dT</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>specific_neutrino_energy_loss</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>dEps_dRho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>specific_neutrino_flux</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>specific_neutrino_energy_loss</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double *&#160;</td>
-          <td class="paramname"><em>mass_lost</em>&#160;</td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>specific_neutrino_flux</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>&#160;)</td>
         </tr>
       </table>
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-<h2 class="memtitle"><span class="permalink"><a href="#a5ddf1a13fef574a435fd76a7fb1bb374">&#9670;&#160;</a></span>gf_free()</h2>
+<a id="a1a963d1279164f2a870be4e9e1dba1d5" name="a1a963d1279164f2a870be4e9e1dba1d5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1a963d1279164f2a870be4e9e1dba1d5">&#9670;&#160;</a></span>gf_free()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">void gf_free </td>
+          <td class="memname">int gf_free </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ctx</em></td><td>)</td>
+          <td class="paramtype">const enum <a class="el" href="#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -469,8 +481,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">char * gf_get_last_error_message </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em></td><td>)</td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -478,8 +489,8 @@ Functions</h2></td></tr>
 
 </div>
 </div>
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-<h2 class="memtitle"><span class="permalink"><a href="#aa06d49e737afd147061f4f15e6e5afcc">&#9670;&#160;</a></span>gf_init()</h2>
+<a id="a0d42f6060caa8e73b2ef36f591a12034" name="a0d42f6060caa8e73b2ef36f591a12034"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0d42f6060caa8e73b2ef36f591a12034">&#9670;&#160;</a></span>gf_init()</h2>
 
 <div class="memitem">
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@@ -487,7 +498,7 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void * gf_init </td>
           <td>(</td>
-          <td class="paramname"></td><td>)</td>
+          <td class="paramtype">const enum <a class="el" href="#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span></td><td>)</td>
           <td></td>
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       </table>
@@ -504,25 +515,43 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">int gf_register_species </td>
           <td>(</td>
-          <td class="paramtype">void *&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
+          <td class="paramtype">void *</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const int&#160;</td>
-          <td class="paramname"><em>num_species</em>, </td>
+          <td class="paramtype">const int</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const char **&#160;</td>
-          <td class="paramname"><em>species_names</em>&#160;</td>
+          <td class="paramtype">const char **</td>          <td class="paramname"><span class="paramname"><em>species_names</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
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-    [ "gf_free", "gridfire__extern_8h.html#a5ddf1a13fef574a435fd76a7fb1bb374", null ],
+    [ "gf_evolve", "gridfire__extern_8h.html#a807dc807fea7c92f328849aea7572af4", null ],
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-    [ "setup_solver", "gridfire__mod_8f90.html#a6ef21ebd4c28993a28ef2745cbeae022", null ]
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+    [ "gridfire_mod::gff_evolve_single", "namespacegridfire__mod.html#a0efe918be492a18d8ed355bd5dc5d8de", null ],
+    [ "gridfire_mod::gff_free", "namespacegridfire__mod.html#a64b4012b59c5ddf025073c6a8bf467c3", null ],
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+    [ "gridfire_mod::gff_setup_solver", "namespacegridfire__mod.html#abb95b0aa3e2446b2ea94c7f0e67887a3", null ],
+    [ "gridfire_mod::multi_zone", "namespacegridfire__mod.html#a9f5a047acbb12c43ca8c6ce46daf42f3", null ],
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 <div class="textblock"><code>#include &lt;cstdint&gt;</code><br />
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 <p><a href="inherits.html">Go to the graphical class hierarchy</a></p>
 This inheritance list is sorted roughly, but not completely, alphabetically:</div><div class="directory">
-<div class="levels">[detail level <span onclick="javascript:toggleLevel(1);">1</span><span onclick="javascript:toggleLevel(2);">2</span><span onclick="javascript:toggleLevel(3);">3</span><span onclick="javascript:toggleLevel(4);">4</span><span onclick="javascript:toggleLevel(5);">5</span>]</div><table class="directory">
-<tr id="row_0_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1policy_1_1TemperatureDependentChainPolicy_1_1ActiveTempRange.html" target="_self">gridfire::policy::TemperatureDependentChainPolicy::ActiveTempRange</a></td><td class="desc">Struct to hold the active temperature range for the reaction chain </td></tr>
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-<tr id="row_1_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1GraphEngine_1_1AtomicReverseRate.html" target="_self">gridfire::engine::GraphEngine::AtomicReverseRate</a></td><td class="desc"></td></tr>
-<tr id="row_1_1_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction_1_1AtomicWeakRate.html" target="_self">gridfire::rates::weak::WeakReaction::AtomicWeakRate</a></td><td class="desc">CppAD atomic that wraps weak-rate interpolation for AD evaluation </td></tr>
-<tr id="row_2_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1BoundsErrorInfo.html" target="_self">gridfire::rates::weak::BoundsErrorInfo</a></td><td class="desc">Detailed bounds information for a BOUNDS_ERROR </td></tr>
-<tr id="row_3_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_3_" class="arrow" onclick="toggleFolder('3_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1utils_1_1ColumnBase.html" target="_self">gridfire::utils::ColumnBase</a></td><td class="desc"></td></tr>
-<tr id="row_3_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1utils_1_1Column.html" target="_self">gridfire::utils::Column&lt; T &gt;</a></td><td class="desc"></td></tr>
-<tr id="row_4_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1GraphEngine_1_1constants.html" target="_self">gridfire::engine::GraphEngine::constants</a></td><td class="desc"></td></tr>
-<tr id="row_5_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakReaction_1_1constants.html" target="_self">gridfire::rates::weak::WeakReaction::constants</a></td><td class="desc"></td></tr>
-<tr id="row_6_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1CVODERHSOutputData.html" target="_self">gridfire::solver::CVODESolverStrategy::CVODERHSOutputData</a></td><td class="desc"></td></tr>
-<tr id="row_7_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1CVODEUserData.html" target="_self">gridfire::solver::CVODESolverStrategy::CVODEUserData</a></td><td class="desc">A helper struct to pass C++ context to C-style CVODE callbacks </td></tr>
-<tr id="row_8_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1EnergyDerivatives.html" target="_self">gridfire::engine::EnergyDerivatives</a></td><td class="desc">Structure holding derivatives of energy generation rate with respect to T and rho </td></tr>
-<tr id="row_9_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_9_" class="arrow" onclick="toggleFolder('9_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1Engine.html" target="_self">gridfire::engine::Engine</a></td><td class="desc">Abstract base class for a reaction network engine </td></tr>
-<tr id="row_9_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classPyEngine.html" target="_self">PyEngine</a></td><td class="desc"></td></tr>
-<tr id="row_9_1_" class="even" style="display:none;"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_9_1_" class="arrow" onclick="toggleFolder('9_1_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" target="_self">gridfire::engine::DynamicEngine</a></td><td class="desc">Abstract class for engines supporting Jacobian and stoichiometry operations </td></tr>
-<tr id="row_9_1_0_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classPyDynamicEngine.html" target="_self">PyDynamicEngine</a></td><td class="desc"></td></tr>
-<tr id="row_9_1_1_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html" target="_self">gridfire::engine::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
-<tr id="row_9_1_2_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_9_1_2_" class="arrow" onclick="toggleFolder('9_1_2_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html" target="_self">gridfire::engine::DefinedEngineView</a></td><td class="desc"></td></tr>
-<tr id="row_9_1_2_0_" class="even" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html" target="_self">gridfire::engine::FileDefinedEngineView</a></td><td class="desc"></td></tr>
-<tr id="row_9_1_2_1_" class="even" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1NetworkPrimingEngineView.html" target="_self">gridfire::engine::NetworkPrimingEngineView</a></td><td class="desc">Provides a view of a <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> filtered to reactions involving a specified priming species </td></tr>
-<tr id="row_9_1_3_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html" target="_self">gridfire::engine::GraphEngine</a></td><td class="desc">A reaction network engine that uses a graph-based representation </td></tr>
-<tr id="row_9_1_4_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html" target="_self">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="desc">An engine view that partitions the reaction network into multiple groups based on timescales </td></tr>
-<tr id="row_10_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1EngineView.html" target="_self">gridfire::engine::EngineView&lt; EngineT &gt;</a></td><td class="desc">Abstract base class for a "view" of a reaction network engine </td></tr>
-<tr id="row_11_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_11_" class="arrow" onclick="toggleFolder('11_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1EngineView.html" target="_self">gridfire::engine::EngineView&lt; DynamicEngine &gt;</a></td><td class="desc"></td></tr>
-<tr id="row_11_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1AdaptiveEngineView.html" target="_self">gridfire::engine::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
-<tr id="row_11_1_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html" target="_self">gridfire::engine::DefinedEngineView</a></td><td class="desc"></td></tr>
-<tr id="row_11_2_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html" target="_self">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="desc">An engine view that partitions the reaction network into multiple groups based on timescales </td></tr>
-<tr id="row_12_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_12_" class="arrow" onclick="toggleFolder('12_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1EngineView.html" target="_self">gridfire::engine::EngineView&lt; gridfire::engine::DynamicEngine &gt;</a></td><td class="desc"></td></tr>
-<tr id="row_12_0_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classPyDynamicEngineView.html" target="_self">PyDynamicEngineView</a></td><td class="desc"></td></tr>
-<tr id="row_13_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_13_" class="arrow" onclick="toggleFolder('13_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1EngineView.html" target="_self">gridfire::engine::EngineView&lt; gridfire::engine::Engine &gt;</a></td><td class="desc"></td></tr>
-<tr id="row_13_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classPyEngineView.html" target="_self">PyEngineView</a></td><td class="desc"></td></tr>
-<tr id="row_14_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_14_" class="arrow" onclick="toggleFolder('14_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><b>std::exception</b></td><td class="desc">STL class </td></tr>
-<tr id="row_14_0_" class="odd" style="display:none;"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_14_0_" class="arrow" onclick="toggleFolder('14_0_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1GridFireError.html" target="_self">gridfire::exceptions::GridFireError</a></td><td class="desc">Base class for GridFire exceptions </td></tr>
-<tr id="row_14_0_0_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1DebugException.html" target="_self">gridfire::exceptions::DebugException</a></td><td class="desc">Exception class for debug-only errors </td></tr>
-<tr id="row_14_0_1_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_14_0_1_" class="arrow" onclick="toggleFolder('14_0_1_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1EngineError.html" target="_self">gridfire::exceptions::EngineError</a></td><td class="desc">Base class for engine-related exceptions </td></tr>
-<tr id="row_14_0_1_0_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1BadCollectionError.html" target="_self">gridfire::exceptions::BadCollectionError</a></td><td class="desc">Exception for invalid composition collection in the engine </td></tr>
-<tr id="row_14_0_1_1_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1BadRHSEngineError.html" target="_self">gridfire::exceptions::BadRHSEngineError</a></td><td class="desc">Exception for errors in calculating the right-hand side (RHS) </td></tr>
-<tr id="row_14_0_1_2_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1FailedToPartitionEngineError.html" target="_self">gridfire::exceptions::FailedToPartitionEngineError</a></td><td class="desc">Exception for failures in partitioning the engine </td></tr>
-<tr id="row_14_0_1_3_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1InvalidQSESolutionError.html" target="_self">gridfire::exceptions::InvalidQSESolutionError</a></td><td class="desc">Exception for invalid QSE solution in the engine </td></tr>
-<tr id="row_14_0_1_4_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span id="arr_14_0_1_4_" class="arrow" onclick="toggleFolder('14_0_1_4_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1JacobianError.html" target="_self">gridfire::exceptions::JacobianError</a></td><td class="desc">Base class for Jacobian-related exceptions </td></tr>
-<tr id="row_14_0_1_4_0_" class="odd" style="display:none;"><td class="entry"><span style="width:80px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1StaleJacobianError.html" target="_self">gridfire::exceptions::StaleJacobianError</a></td><td class="desc">Exception for stale Jacobian matrix access </td></tr>
-<tr id="row_14_0_1_4_1_" class="odd" style="display:none;"><td class="entry"><span style="width:80px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1UninitializedJacobianError.html" target="_self">gridfire::exceptions::UninitializedJacobianError</a></td><td class="desc">Exception for uninitialized Jacobian matrix access </td></tr>
-<tr id="row_14_0_1_4_2_" class="odd" style="display:none;"><td class="entry"><span style="width:80px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1UnknownJacobianError.html" target="_self">gridfire::exceptions::UnknownJacobianError</a></td><td class="desc">Exception for unknown Jacobian matrix access </td></tr>
-<tr id="row_14_0_1_5_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1NetworkResizedError.html" target="_self">gridfire::exceptions::NetworkResizedError</a></td><td class="desc">Exception for errors during network resizing </td></tr>
-<tr id="row_14_0_1_6_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1UnableToSetNetworkReactionsError.html" target="_self">gridfire::exceptions::UnableToSetNetworkReactionsError</a></td><td class="desc">Exception for failures in setting network reactions </td></tr>
-<tr id="row_14_0_2_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_14_0_2_" class="arrow" onclick="toggleFolder('14_0_2_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1PolicyError.html" target="_self">gridfire::exceptions::PolicyError</a></td><td class="desc">Base class for all exceptions related to network policy operations </td></tr>
-<tr id="row_14_0_2_0_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1MissingBaseReactionError.html" target="_self">gridfire::exceptions::MissingBaseReactionError</a></td><td class="desc">Exception thrown when a required reaction is missing from the underlying database (e.g., REACLIB) </td></tr>
-<tr id="row_14_0_2_1_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1MissingKeyReactionError.html" target="_self">gridfire::exceptions::MissingKeyReactionError</a></td><td class="desc">Exception thrown when a constructed network fails to include a key reaction required by the policy </td></tr>
-<tr id="row_14_0_2_2_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1MissingSeedSpeciesError.html" target="_self">gridfire::exceptions::MissingSeedSpeciesError</a></td><td class="desc">Exception thrown when a required seed species is not found in the initial composition </td></tr>
-<tr id="row_14_0_3_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_14_0_3_" class="arrow" onclick="toggleFolder('14_0_3_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1ReactionError.html" target="_self">gridfire::exceptions::ReactionError</a></td><td class="desc">Base class for all exceptions related to reaction operations </td></tr>
-<tr id="row_14_0_3_0_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1ReactionParsingError.html" target="_self">gridfire::exceptions::ReactionParsingError</a></td><td class="desc"></td></tr>
-<tr id="row_14_0_4_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_14_0_4_" class="arrow" onclick="toggleFolder('14_0_4_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1SolverError.html" target="_self">gridfire::exceptions::SolverError</a></td><td class="desc">Base class for all exceptions related to solver operations </td></tr>
-<tr id="row_14_0_4_0_" class="odd" style="display:none;"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1IllConditionedJacobianError.html" target="_self">gridfire::exceptions::IllConditionedJacobianError</a></td><td class="desc">Exception thrown when the Jacobian matrix is ill-conditioned </td></tr>
-<tr id="row_14_0_4_1_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span id="arr_14_0_4_1_" class="arrow" onclick="toggleFolder('14_0_4_1_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1SUNDIALSError.html" target="_self">gridfire::exceptions::SUNDIALSError</a></td><td class="desc">Base class for exceptions related to SUNDIALS solver operations </td></tr>
-<tr id="row_14_0_4_1_0_" class="odd" style="display:none;"><td class="entry"><span style="width:80px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1CVODESolverFailureError.html" target="_self">gridfire::exceptions::CVODESolverFailureError</a></td><td class="desc">Exception for failures in the CVODE solver </td></tr>
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+<tr id="row_16_1_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_defined_engine_view.html" target="_self">gridfire::engine::DefinedEngineView</a></td><td class="desc"></td></tr>
+<tr id="row_16_2_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html" target="_self">gridfire::engine::MultiscalePartitioningEngineView</a></td><td class="desc">An engine view that partitions the reaction network into multiple groups based on timescales </td></tr>
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+<tr id="row_17_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="class_py_dynamic_engine_view.html" target="_self">PyDynamicEngineView</a></td><td class="desc"></td></tr>
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+<tr id="row_20_0_0_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_debug_exception.html" target="_self">gridfire::exceptions::DebugException</a></td><td class="desc">Exception class for debug-only errors </td></tr>
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+<tr id="row_57_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputed_reaction.html" target="_self">gridfire::engine::GraphEngine::PrecomputedReaction</a></td><td class="desc"></td></tr>
+<tr id="row_58_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" target="_self">gridfire::engine::PrimingReport</a></td><td class="desc">Captures the result of a network priming operation </td></tr>
+<tr id="row_59_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html" target="_self">gridfire::io::gen::PyFunctionDef</a></td><td class="desc">Structure representing a Python function definition </td></tr>
+<tr id="row_60_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html" target="_self">gridfire::engine::MultiscalePartitioningEngineView::QSEGroup</a></td><td class="desc">Struct representing a QSE group </td></tr>
+<tr id="row_61_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html" target="_self">gridfire::engine::MultiscalePartitioningEngineView::QSESolver</a></td><td class="desc"></td></tr>
+<tr id="row_62_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html" target="_self">gridfire::reaction::RateCoefficientSet</a></td><td class="desc">Holds the seven coefficients for the REACLIB rate equation </td></tr>
+<tr id="row_63_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_rate_data_row.html" target="_self">gridfire::rates::weak::RateDataRow</a></td><td class="desc">One row of the unified weak-rate data table for a specific isotope and state </td></tr>
+<tr id="row_64_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1partition_1_1record_1_1_rauscher_thielemann_partition_data_record.html" target="_self">gridfire::partition::record::RauscherThielemannPartitionDataRecord</a></td><td class="desc">Packed binary record of Rauscher-Thielemann partition function data for an isotope </td></tr>
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+<tr id="row_65_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html" target="_self">gridfire::rates::weak::WeakReaction</a></td><td class="desc">Concrete Reaction representing a single weak process (beta±, e−/e+ capture) </td></tr>
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+<tr id="row_65_1_0_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html" target="_self">gridfire::reaction::LogicalReaclibReaction</a></td><td class="desc">Represents a "logical" reaction that aggregates rates from multiple sources </td></tr>
+<tr id="row_65_1_1_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html" target="_self">gridfire::reaction::WeakReaclibReaction</a></td><td class="desc"></td></tr>
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+<tr id="row_66_0_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html" target="_self">gridfire::rates::weak::WeakReaction</a></td><td class="desc">Concrete Reaction representing a single weak process (beta±, e−/e+ capture) </td></tr>
+<tr id="row_66_1_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_reaclib_reaction.html" target="_self">gridfire::reaction::ReaclibReaction</a></td><td class="desc"></td></tr>
+<tr id="row_67_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_67_" class="arrow" onclick="dynsection.toggleFolder('67_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html" target="_self">gridfire::policy::ReactionChainPolicy</a></td><td class="desc">Abstract interface encapsulating a set of reactions representing a single chain or pathway </td></tr>
+<tr id="row_67_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="class_py_reaction_chain_policy.html" target="_self">PyReactionChainPolicy</a></td><td class="desc"></td></tr>
+<tr id="row_67_1_" class="even" style="display:none;"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_67_1_" class="arrow" onclick="dynsection.toggleFolder('67_1_')">&#9658;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html" target="_self">gridfire::policy::MultiReactionChainPolicy</a></td><td class="desc">A <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html" title="Abstract interface encapsulating a set of reactions representing a single chain or pathway.">ReactionChainPolicy</a> composed of multiple child <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html" title="Abstract interface encapsulating a set of reactions representing a single chain or pathway.">ReactionChainPolicy</a> instances </td></tr>
+<tr id="row_67_1_0_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_chain_policy.html" target="_self">gridfire::policy::CNOChainPolicy</a></td><td class="desc">CNO Chain Policy </td></tr>
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+<tr id="row_67_1_2_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html" target="_self">gridfire::policy::MainSequenceReactionChainPolicy</a></td><td class="desc">Main Sequence Reaction Chain Policy </td></tr>
+<tr id="row_67_1_3_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_chain_policy.html" target="_self">gridfire::policy::ProtonProtonChainPolicy</a></td><td class="desc">Proton-Proton Chain Policy </td></tr>
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+<tr id="row_67_2_0_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_chain_policy.html" target="_self">gridfire::policy::CNOIChainPolicy</a></td><td class="desc">CNO I Chain Policy </td></tr>
+<tr id="row_67_2_1_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html" target="_self">gridfire::policy::CNOIIChainPolicy</a></td><td class="desc">CNO II Chain Policy </td></tr>
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+<tr id="row_67_2_3_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html" target="_self">gridfire::policy::CNOIVChainPolicy</a></td><td class="desc">CNO IV Chain Policy </td></tr>
+<tr id="row_67_2_4_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html" target="_self">gridfire::policy::HotCNOIChainPolicy</a></td><td class="desc">Hot CNO I Chain Policy </td></tr>
+<tr id="row_67_2_5_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html" target="_self">gridfire::policy::HotCNOIIChainPolicy</a></td><td class="desc">Hot CNO II Chain Policy </td></tr>
+<tr id="row_67_2_6_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html" target="_self">gridfire::policy::HotCNOIIIChainPolicy</a></td><td class="desc">Hot CNO III Chain Policy </td></tr>
+<tr id="row_67_2_7_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html" target="_self">gridfire::policy::ProtonProtonIChainPolicy</a></td><td class="desc">Proton-Proton I Chain Policy </td></tr>
+<tr id="row_67_2_8_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html" target="_self">gridfire::policy::ProtonProtonIIChainPolicy</a></td><td class="desc">Proton-Proton II Chain Policy </td></tr>
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+<tr id="row_68_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html" target="_self">gridfire::engine::AdaptiveEngineView::ReactionFlow</a></td><td class="desc">A struct to hold a reaction and its flow rate </td></tr>
+<tr id="row_69_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html" target="_self">gridfire::reaclib::ReactionRecord</a></td><td class="desc"></td></tr>
+<tr id="row_70_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html" target="_self">gridfire::engine::ReactionSet</a></td><td class="desc"></td></tr>
+<tr id="row_71_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html" target="_self">gridfire::reaction::ReactionSet</a></td><td class="desc"></td></tr>
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+<tr id="row_81_0_3_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html" target="_self">gridfire::trigger::OrTrigger&lt; TriggerContextStruct &gt;</a></td><td class="desc">Logical disjunction of two triggers with short-circuit evaluation </td></tr>
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+<tr id="row_82_0_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html" target="_self">gridfire::trigger::solver::CVODE::BoundaryFluxTrigger</a></td><td class="desc"></td></tr>
+<tr id="row_82_1_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html" target="_self">gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger</a></td><td class="desc"></td></tr>
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+<tr id="row_82_4_" class="odd" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html" target="_self">gridfire::trigger::solver::CVODE::TimestepCollapseTrigger</a></td><td class="desc">Triggers when the timestep deviates from its recent average beyond a threshold </td></tr>
+<tr id="row_83_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1config_1_1_trigger_config.html" target="_self">gridfire::config::TriggerConfig</a></td><td class="desc"></td></tr>
+<tr id="row_84_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html" target="_self">gridfire::trigger::TriggerResult</a></td><td class="desc"></td></tr>
+<tr id="row_85_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html" target="_self">gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData</a></td><td class="desc"></td></tr>
+<tr id="row_86_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_derivatives.html" target="_self">gridfire::rates::weak::WeakRateDerivatives</a></td><td class="desc">Partial derivatives of the log10() fields w.r.t. (T9, log10(rho*Ye)) </td></tr>
+<tr id="row_87_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html" target="_self">gridfire::rates::weak::WeakRateInterpolator</a></td><td class="desc">3D table interpolator for tabulated weak reaction data by isotope </td></tr>
+<tr id="row_88_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_payload.html" target="_self">gridfire::rates::weak::WeakRatePayload</a></td><td class="desc">Interpolated weak-rate payload at a single state </td></tr>
+<tr id="row_89_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html" target="_self">gridfire::rates::weak::WeakReactionEntry</a></td><td class="desc">A single weak-reaction data point (type, state, and log values) </td></tr>
+<tr id="row_90_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html" target="_self">gridfire::rates::weak::WeakReactionMap</a></td><td class="desc">Index of available weak reactions keyed by species </td></tr>
 </table>
 </div><!-- directory -->
 </div><!-- contents -->
@@ -268,7 +323,7 @@ This inheritance list is sorted roughly, but not completely, alphabetically:</di
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+            [ "gridfire::exceptions::UninitializedJacobianError", "classgridfire_1_1exceptions_1_1_uninitialized_jacobian_error.html", null ],
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-          [ "gridfire::exceptions::MissingSeedSpeciesError", "classgridfire_1_1exceptions_1_1MissingSeedSpeciesError.html", null ]
+        [ "gridfire::exceptions::PolicyError", "classgridfire_1_1exceptions_1_1_policy_error.html", [
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+    [ "gridfire::engine::AdaptiveEngineView::ReactionFlow", "structgridfire_1_1engine_1_1_adaptive_engine_view_1_1_reaction_flow.html", null ],
+    [ "gridfire::reaclib::ReactionRecord", "structgridfire_1_1reaclib_1_1_reaction_record.html", null ],
+    [ "gridfire::engine::ReactionSet", "classgridfire_1_1engine_1_1_reaction_set.html", null ],
+    [ "gridfire::reaction::ReactionSet", "classgridfire_1_1reaction_1_1_reaction_set.html", null ],
+    [ "gridfire::screening::ScreeningModel", "classgridfire_1_1screening_1_1_screening_model.html", [
+      [ "PyScreening", "class_py_screening.html", null ],
+      [ "gridfire::screening::BareScreeningModel", "classgridfire_1_1screening_1_1_bare_screening_model.html", null ],
+      [ "gridfire::screening::IntermediateScreeningModel", "classgridfire_1_1screening_1_1_intermediate_screening_model.html", null ],
+      [ "gridfire::screening::WeakScreeningModel", "classgridfire_1_1screening_1_1_weak_screening_model.html", null ]
     ] ],
-    [ "gridfire::solver::SolverContextBase", "classgridfire_1_1solver_1_1SolverContextBase.html", [
-      [ "PySolverContextBase", "classPySolverContextBase.html", null ],
-      [ "gridfire::solver::CVODESolverStrategy::TimestepContext", "structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html", null ]
+    [ "gridfire::solver::SingleZoneNetworkSolver< EngineT >", "classgridfire_1_1solver_1_1_single_zone_network_solver.html", null ],
+    [ "gridfire::solver::SingleZoneNetworkSolver< engine::DynamicEngine >", "classgridfire_1_1solver_1_1_single_zone_network_solver.html", [
+      [ "PySingleZoneDynamicNetworkSolver", "class_py_single_zone_dynamic_network_solver.html", null ],
+      [ "gridfire::solver::PointSolver", "classgridfire_1_1solver_1_1_point_solver.html", null ]
     ] ],
-    [ "gridfire::engine::StepDerivatives< T >", "structgridfire_1_1engine_1_1StepDerivatives.html", null ],
-    [ "gridfire::utils::TableBase", "classgridfire_1_1utils_1_1TableBase.html", [
-      [ "gridfire::utils::Table< T >", "classgridfire_1_1utils_1_1Table.html", null ]
+    [ "gridfire::config::SolverConfig", "structgridfire_1_1config_1_1_solver_config.html", null ],
+    [ "gridfire::solver::SolverContextBase", "structgridfire_1_1solver_1_1_solver_context_base.html", [
+      [ "PySolverContextBase", "class_py_solver_context_base.html", null ],
+      [ "gridfire::solver::GridSolverContext", "structgridfire_1_1solver_1_1_grid_solver_context.html", null ],
+      [ "gridfire::solver::PointSolverContext", "structgridfire_1_1solver_1_1_point_solver_context.html", null ]
     ] ],
-    [ "gridfire::trigger::Trigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1Trigger.html", [
-      [ "gridfire::trigger::LogicalTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1LogicalTrigger.html", [
-        [ "gridfire::trigger::AndTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1AndTrigger.html", null ],
-        [ "gridfire::trigger::EveryNthTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1EveryNthTrigger.html", null ],
-        [ "gridfire::trigger::NotTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1NotTrigger.html", null ],
-        [ "gridfire::trigger::OrTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1OrTrigger.html", null ]
+    [ "gridfire::engine::scratch::StateBlob", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html", null ],
+    [ "gridfire::engine::StepDerivatives< T >", "structgridfire_1_1engine_1_1_step_derivatives.html", null ],
+    [ "gridfire::utils::TableBase", "classgridfire_1_1utils_1_1_table_base.html", [
+      [ "gridfire::utils::Table< T >", "classgridfire_1_1utils_1_1_table.html", null ]
+    ] ],
+    [ "gridfire::solver::TimestepContextBase", "classgridfire_1_1solver_1_1_timestep_context_base.html", [
+      [ "PyTimestepContextBase", "class_py_timestep_context_base.html", null ],
+      [ "gridfire::solver::PointSolverTimestepContext", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html", null ]
+    ] ],
+    [ "gridfire::trigger::Trigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_trigger.html", [
+      [ "gridfire::trigger::LogicalTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_logical_trigger.html", [
+        [ "gridfire::trigger::AndTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_and_trigger.html", null ],
+        [ "gridfire::trigger::EveryNthTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_every_nth_trigger.html", null ],
+        [ "gridfire::trigger::NotTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_not_trigger.html", null ],
+        [ "gridfire::trigger::OrTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_or_trigger.html", null ]
       ] ]
     ] ],
-    [ "gridfire::trigger::Trigger< gridfire::solver::CVODESolverStrategy::TimestepContext >", "classgridfire_1_1trigger_1_1Trigger.html", [
-      [ "gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger", "classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1ConvergenceFailureTrigger.html", null ],
-      [ "gridfire::trigger::solver::CVODE::OffDiagonalTrigger", "classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1OffDiagonalTrigger.html", null ],
-      [ "gridfire::trigger::solver::CVODE::SimulationTimeTrigger", "classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1SimulationTimeTrigger.html", null ],
-      [ "gridfire::trigger::solver::CVODE::TimestepCollapseTrigger", "classgridfire_1_1trigger_1_1solver_1_1CVODE_1_1TimestepCollapseTrigger.html", null ]
+    [ "gridfire::trigger::Trigger< gridfire::solver::PointSolverTimestepContext >", "classgridfire_1_1trigger_1_1_trigger.html", [
+      [ "gridfire::trigger::solver::CVODE::BoundaryFluxTrigger", "classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_boundary_flux_trigger.html", null ],
+      [ "gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger", "classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_convergence_failure_trigger.html", null ],
+      [ "gridfire::trigger::solver::CVODE::OffDiagonalTrigger", "classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_off_diagonal_trigger.html", null ],
+      [ "gridfire::trigger::solver::CVODE::SimulationTimeTrigger", "classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html", null ],
+      [ "gridfire::trigger::solver::CVODE::TimestepCollapseTrigger", "classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_timestep_collapse_trigger.html", null ]
     ] ],
-    [ "gridfire::trigger::TriggerResult", "structgridfire_1_1trigger_1_1TriggerResult.html", null ],
-    [ "gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData", "structgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver_1_1UserData.html", null ],
-    [ "gridfire::rates::weak::WeakRateDerivatives", "structgridfire_1_1rates_1_1weak_1_1WeakRateDerivatives.html", null ],
-    [ "gridfire::rates::weak::WeakRateInterpolator", "classgridfire_1_1rates_1_1weak_1_1WeakRateInterpolator.html", null ],
-    [ "gridfire::rates::weak::WeakRatePayload", "structgridfire_1_1rates_1_1weak_1_1WeakRatePayload.html", null ],
-    [ "gridfire::rates::weak::WeakReactionEntry", "structgridfire_1_1rates_1_1weak_1_1WeakReactionEntry.html", null ],
-    [ "gridfire::rates::weak::WeakReactionMap", "classgridfire_1_1rates_1_1weak_1_1WeakReactionMap.html", null ]
+    [ "gridfire::config::TriggerConfig", "structgridfire_1_1config_1_1_trigger_config.html", null ],
+    [ "gridfire::trigger::TriggerResult", "structgridfire_1_1trigger_1_1_trigger_result.html", null ],
+    [ "gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData", "structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html", null ],
+    [ "gridfire::rates::weak::WeakRateDerivatives", "structgridfire_1_1rates_1_1weak_1_1_weak_rate_derivatives.html", null ],
+    [ "gridfire::rates::weak::WeakRateInterpolator", "classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html", null ],
+    [ "gridfire::rates::weak::WeakRatePayload", "structgridfire_1_1rates_1_1weak_1_1_weak_rate_payload.html", null ],
+    [ "gridfire::rates::weak::WeakReactionEntry", "structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html", null ],
+    [ "gridfire::rates::weak::WeakReactionMap", "classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html", null ]
 ];
\ No newline at end of file
diff --git a/docs/html/index.html b/docs/html/index.html
index 0d5f1b2d..03140157 100644
--- a/docs/html/index.html
+++ b/docs/html/index.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: GridFire</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('index.html',''); initResizable(); });
+$(function(){initNavTree('index.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
@@ -138,16 +145,16 @@ pypi</h3>
 <td class="markdownTableBodyNone">0.5.0   </td><td class="markdownTableBodyNone">Linux   </td><td class="markdownTableBodyNone">x86_64   </td><td class="markdownTableBodyNone">3.8, 3.9, 3.10, 3.11, 3.12, 3.13 (std &amp; t), 3.14 (std &amp; t)   </td><td class="markdownTableBodyNone">3.10, 3.11   </td></tr>
 </table>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note</b>: Currently macOS x86_64 does <b>not</b> have a precompiled wheel. Due to that platform being phased out it is likely that there will never be precompiled wheels or releases for it. </p>
+<p><b>Note</b>: Currently macOS x86_64 does <b>not</b> have a precompiled wheel. Due to that platform being phased out it is likely that there will never be precompiled wheels or releases for it. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> macOS wheels were targeted to macOS 12 Monterey and should work on any version more recent than that (at least as of August 2025). </p>
+<p><b>Note:</b> macOS wheels were targeted to macOS 12 Monterey and should work on any version more recent than that (at least as of August 2025). </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> Linux wheels were compiled using manylinux_2_28 and are expected to work on Debian 10+, Ubuntu 18.10+, Fedora 29+, or CentOS/RHEL 8+ </p>
+<p><b>Note:</b> Linux wheels were compiled using manylinux_2_28 and are expected to work on Debian 10+, Ubuntu 18.10+, Fedora 29+, or CentOS/RHEL 8+ </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> If your system does not have a prebuilt wheel the source distribution will download from pypi and try to build. This may simply not work if you do not have the correct system dependencies installed. If it fails the best bet is to try to build boost &gt;= 1.83.0 from source and install (<a href="https://www.boost.org/">https://www.boost.org/</a>) as that is the most common broken dependency. </p>
+<p><b>Note:</b> If your system does not have a prebuilt wheel the source distribution will download from pypi and try to build. This may simply not work if you do not have the correct system dependencies installed. If it fails the best bet is to try to build boost &gt;= 1.83.0 from source and install (<a href="https://www.boost.org/">https://www.boost.org/</a>) as that is the most common broken dependency. </p>
 </blockquote>
 <h3><a class="anchor" id="autotoc_md8"></a>
 source</h3>
@@ -156,10 +163,10 @@ source</h3>
 <div class="line">cd GridFire</div>
 <div class="line">pip install .</div>
 </div><!-- fragment --><blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> that if you do not have all system dependencies installed this will fail, the steps in further sections address these in more detail. </p>
+<p><b>Note:</b> that if you do not have all system dependencies installed this will fail, the steps in further sections address these in more detail. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> If you are using macos you should use the included <code>pip_install_mac_patch.sh</code> script instead of <code>pip install .</code> as this will automatically patch the build shared object libraries such that they can be loaded by the macos dynamic loader. </p>
+<p><b>Note:</b> If you are using macos you should use the included <code>pip_install_mac_patch.sh</code> script instead of <code>pip install .</code> as this will automatically patch the build shared object libraries such that they can be loaded by the macos dynamic loader. </p>
 </blockquote>
 <h3><a class="anchor" id="autotoc_md9"></a>
 source for developers</h3>
@@ -201,7 +208,7 @@ Currently, known good platforms</h3>
 <li>Ubuntu 22.04 (X86_64)</li>
 </ul>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> On Ubuntu 22.04 the user needs to install boost libraries manually as the versions in the Ubuntu repositories are too old. The installer automatically detects this and will instruct the user in how to do this. </p>
+<p><b>Note:</b> On Ubuntu 22.04 the user needs to install boost libraries manually as the versions in the Ubuntu repositories are too old. The installer automatically detects this and will instruct the user in how to do this. </p>
 </blockquote>
 <h2><a class="anchor" id="autotoc_md14"></a>
 Manual Build Instructions</h2>
@@ -226,13 +233,13 @@ Optional</h4>
 <li>pip (used by the <code>install.sh</code> script or by calling pip directly, not needed if using meson directly)</li>
 </ul>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> Boost is the only external library dependency used by GridFire directly. </p>
+<p><b>Note:</b> Boost is the only external library dependency used by GridFire directly. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> Windows is not supported at this time and <em>there are no plans to support it in the future</em>. Windows users are encouraged to use WSL2 or a Linux VM. </p>
+<p><b>Note:</b> Windows is not supported at this time and <em>there are no plans to support it in the future</em>. Windows users are encouraged to use WSL2 or a Linux VM. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> If <code>install-tui.sh</code> is not able to find a usable version of boost it will provide directions to fetch, compile, and install a usable version. </p>
+<p><b>Note:</b> If <code>install-tui.sh</code> is not able to find a usable version of boost it will provide directions to fetch, compile, and install a usable version. </p>
 </blockquote>
 <h3><a class="anchor" id="autotoc_md18"></a>
 Install Scripts</h3>
@@ -245,20 +252,23 @@ Reproducibility</h4>
 <p>The TUI mode provides easy modification of meson build system and compiler settings which can then be saved to a config file. This config file can then be loaded by either tui mode or cli mode (with the <code>--config</code>) flag meaning that build configurations can be made and reused. Note that this is <b>not</b> a deterministically reproducible build system as it does not interact with any system dependencies or settings, only meson and compiler settings.</p>
 <h4><a class="anchor" id="autotoc_md21"></a>
 Examples</h4>
-<p><a class="anchor" id="autotoc_md22"></a> </p><h5>TUI config and saving</h5>
+<h5><a class="anchor" id="autotoc_md22"></a>
+TUI config and saving</h5>
 <p><a href="https://asciinema.org/a/ahIrQPL71ErZv5EKKujfO1ZEW"><img src="https://asciinema.org/a/ahIrQPL71ErZv5EKKujfO1ZEW.svg" alt="asciicast" style="pointer-events: none;" class="inline"/></a></p>
-<p><a class="anchor" id="autotoc_md23"></a> </p><h5>TUI config loading and meson setup</h5>
+<h5><a class="anchor" id="autotoc_md23"></a>
+TUI config loading and meson setup</h5>
 <p><a href="https://asciinema.org/a/zGdzt9kYsETltG0TJKC50g3BK"><img src="https://asciinema.org/a/zGdzt9kYsETltG0TJKC50g3BK.svg" alt="asciicast" style="pointer-events: none;" class="inline"/></a></p>
-<p><a class="anchor" id="autotoc_md24"></a> </p><h5>CLI config loading, setup, and build</h5>
+<h5><a class="anchor" id="autotoc_md24"></a>
+CLI config loading, setup, and build</h5>
 <p><a href="https://asciinema.org/a/GYaWTXZbDJRD4ohde0s3DkFMC"><img src="https://asciinema.org/a/GYaWTXZbDJRD4ohde0s3DkFMC.svg" alt="asciicast" style="pointer-events: none;" class="inline"/></a></p>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> <code>install-tui.sh</code> is simply a script which calls <code>install.sh</code> with the <code>--tui</code> flag. You can get the exact same results by running <code>install.sh --tui</code>. </p>
+<p><b>Note:</b> <code>install-tui.sh</code> is simply a script which calls <code>install.sh</code> with the <code>--tui</code> flag. You can get the exact same results by running <code>install.sh --tui</code>. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> Call <code>install.sh</code> with the <code>--help</code> or <code>--h</code> flag to see command line options </p>
+<p><b>Note:</b> Call <code>install.sh</code> with the <code>--help</code> or <code>--h</code> flag to see command line options </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> <code>clang</code> tends to compile GridFire much faster than <code>gcc</code> thus why I select it in the above asciinema recording. </p>
+<p><b>Note:</b> <code>clang</code> tends to compile GridFire much faster than <code>gcc</code> thus why I select it in the above asciinema recording. </p>
 </blockquote>
 <h3><a class="anchor" id="autotoc_md25"></a>
 Dependency Installation on Common Platforms</h3>
@@ -268,10 +278,10 @@ Dependency Installation on Common Platforms</h3>
 </div><!-- fragment --></li>
 </ul>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> Depending on the ubuntu version you have the libboost-all-dev libraries may be too old. If this is the case refer to the boost documentation for how to download and install a version <code>&gt;=1.83.0</code> </p>
+<p><b>Note:</b> Depending on the ubuntu version you have the libboost-all-dev libraries may be too old. If this is the case refer to the boost documentation for how to download and install a version <code>&gt;=1.83.0</code> </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> On recent versions of ubuntu python has switched to being externally managed by the system. We <b>strongly</b> recommend that if you install manually all python packages are installed inside some kind of virtual environment (e.g. <code>pyenv</code>, <code>conda</code>, <code>python-venv</code>, etc...). When using the installer script this is handled automatically using <code>python-venv</code>. </p>
+<p><b>Note:</b> On recent versions of ubuntu python has switched to being externally managed by the system. We <b>strongly</b> recommend that if you install manually all python packages are installed inside some kind of virtual environment (e.g. <code>pyenv</code>, <code>conda</code>, <code>python-venv</code>, etc...). When using the installer script this is handled automatically using <code>python-venv</code>. </p>
 </blockquote>
 <ul>
 <li><b>Fedora/CentOS/RHEL:</b> <div class="fragment"><div class="line">sudo dnf install -y gcc-c++ meson python3 python3-pip boost-devel</div>
@@ -443,8 +453,7 @@ Usage Examples</h1>
 C++</h2>
 <h3><a class="anchor" id="autotoc_md48"></a>
 GraphEngine Initialization</h3>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__graph_8h.html">gridfire/engine/engine_graph.h</a>&quot;</span></div>
+<div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__graph_8h.html">gridfire/engine/engine_graph.h</a>&quot;</span></div>
 <div class="line"><span class="preprocessor">#include &quot;fourdst/composition/composition.h&quot;</span></div>
 <div class="line"> </div>
 <div class="line"><span class="keywordtype">int</span> main(){</div>
@@ -455,8 +464,7 @@ GraphEngine Initialization</h3>
 <div class="ttc" id="aengine__graph_8h_html"><div class="ttname"><a href="engine__graph_8h.html">engine_graph.h</a></div></div>
 </div><!-- fragment --><h3><a class="anchor" id="autotoc_md49"></a>
 Adaptive Network View</h3>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__adaptive_8h.html">gridfire/engine/views/engine_adaptive.h</a>&quot;</span></div>
+<div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__adaptive_8h.html">gridfire/engine/views/engine_adaptive.h</a>&quot;</span></div>
 <div class="line"><span class="preprocessor">#include &quot;<a class="code" href="engine__graph_8h.html">gridfire/engine/engine_graph.h</a>&quot;</span></div>
 <div class="line"> </div>
 <div class="line"><span class="keywordtype">int</span> main(){</div>
@@ -468,8 +476,7 @@ Adaptive Network View</h3>
 <div class="ttc" id="aengine__adaptive_8h_html"><div class="ttname"><a href="engine__adaptive_8h.html">engine_adaptive.h</a></div></div>
 </div><!-- fragment --><h3><a class="anchor" id="autotoc_md50"></a>
 Composition Initialization</h3>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line"><span class="preprocessor">#include &quot;fourdst/composition/composition.h&quot;</span></div>
+<div class="fragment"><div class="line"><span class="preprocessor">#include &quot;fourdst/composition/composition.h&quot;</span></div>
 <div class="line"><span class="preprocessor">#include &quot;fourdst/composition/utils.h&quot;</span> <span class="comment">// for buildCompositionFromMassFractions</span></div>
 <div class="line"><span class="preprocessor">#include &lt;vector&gt;</span></div>
 <div class="line"><span class="preprocessor">#include &lt;string&gt;</span></div>
@@ -488,8 +495,7 @@ Composition Initialization</h3>
 </div><!-- fragment --><h3><a class="anchor" id="autotoc_md51"></a>
 Common Workflow Example</h3>
 <p>A representative workflow often composes multiple engine views to balance accuracy, stability, and performance when integrating stiff nuclear networks:</p>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="gridfire_8h.html">gridfire/gridfire.h</a>&quot;</span> <span class="comment">// Unified header for real usage</span></div>
+<div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="gridfire_8h.html">gridfire/gridfire.h</a>&quot;</span> <span class="comment">// Unified header for real usage</span></div>
 <div class="line"> </div>
 <div class="line"><span class="preprocessor">#include &quot;fourdst/composition/composition.h&quot;</span></div>
 <div class="line"><span class="preprocessor">#include &quot;fourdst/composition/utils.h&quot;</span> <span class="comment">// for buildCompositionFromMassFractions</span></div>
@@ -536,8 +542,7 @@ Common Workflow Example</h3>
 </div><!-- fragment --><h3><a class="anchor" id="autotoc_md52"></a>
 Callback and Policy Example</h3>
 <p>Custom callback functions can be registered with any solver. Because it might make sense for each solver to provide different context to the callback function, you should use the struct <code><a class="el" href="namespacegridfire_1_1solver.html">gridfire::solver</a>::&lt;SolverName&gt;::TimestepContext</code> as the argument type for the callback function. This struct contains all the information provided by that solver to the callback function.</p>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="gridfire_8h.html">gridfire/gridfire.h</a>&quot;</span> <span class="comment">// Unified header for real usage</span></div>
+<div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="gridfire_8h.html">gridfire/gridfire.h</a>&quot;</span> <span class="comment">// Unified header for real usage</span></div>
 <div class="line"> </div>
 <div class="line"><span class="preprocessor">#include &quot;fourdst/composition/composition.h&quot;</span> <span class="comment">// for Composition</span></div>
 <div class="line"><span class="preprocessor">#include &quot;fourdst/composition/utils.h&quot;</span> <span class="comment">// for buildCompositionFromMassFractions</span></div>
@@ -545,11 +550,11 @@ Callback and Policy Example</h3>
 <div class="line"> </div>
 <div class="line"><span class="preprocessor">#include &lt;iostream&gt;</span></div>
 <div class="line"> </div>
-<div class="line"><span class="keywordtype">void</span> callback(<span class="keyword">const</span> <a class="code hl_struct" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a>&amp; context) {</div>
-<div class="line">    <span class="keywordtype">int</span> H1Index = context.<a class="code hl_variable" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#a5a457651dcb9d4a66ed219ddf7095313">engine</a>.<a class="code hl_function" href="classgridfire_1_1engine_1_1DynamicEngine.html#ac0f40017603e8e6887b75dc7360d7c5e">getSpeciesIndex</a>(fourdst::atomic::H_1);</div>
-<div class="line">    <span class="keywordtype">int</span> He4Index = context.<a class="code hl_variable" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#a5a457651dcb9d4a66ed219ddf7095313">engine</a>.<a class="code hl_function" href="classgridfire_1_1engine_1_1DynamicEngine.html#ac0f40017603e8e6887b75dc7360d7c5e">getSpeciesIndex</a>(fourdst::atomic::He_4);</div>
+<div class="line"><span class="keywordtype">void</span> callback(<span class="keyword">const</span> gridfire::solver::CVODESolverStrategy::TimestepContext&amp; context) {</div>
+<div class="line">    <span class="keywordtype">int</span> H1Index = context.engine.getSpeciesIndex(fourdst::atomic::H_1);</div>
+<div class="line">    <span class="keywordtype">int</span> He4Index = context.engine.getSpeciesIndex(fourdst::atomic::He_4);</div>
 <div class="line"> </div>
-<div class="line">    std::cout &lt;&lt; context.<a class="code hl_variable" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#a0b39f0d207181840efacb64417b492ae">t</a> &lt;&lt; <span class="stringliteral">&quot;,&quot;</span> &lt;&lt; context.<a class="code hl_variable" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#aaae3c42b9172be4d501f022e67f5a6f6">state</a>(H1Index) &lt;&lt; <span class="stringliteral">&quot;,&quot;</span> &lt;&lt; context.<a class="code hl_variable" href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#aaae3c42b9172be4d501f022e67f5a6f6">state</a>(He4Index) &lt;&lt; <span class="stringliteral">&quot;\n&quot;</span>;</div>
+<div class="line">    std::cout &lt;&lt; context.t &lt;&lt; <span class="stringliteral">&quot;,&quot;</span> &lt;&lt; context.state(H1Index) &lt;&lt; <span class="stringliteral">&quot;,&quot;</span> &lt;&lt; context.state(He4Index) &lt;&lt; <span class="stringliteral">&quot;\n&quot;</span>;</div>
 <div class="line">}</div>
 <div class="line"> </div>
 <div class="line"><span class="keywordtype">int</span> main(){</div>
@@ -558,14 +563,14 @@ Callback and Policy Example</h3>
 <div class="line"> </div>
 <div class="line"> </div>
 <div class="line">    <span class="keyword">const</span> fourdst::composition::Composition composition = fourdst::composition::buildCompositionFromMassFractions(symbols, X);</div>
-<div class="line">    <a class="code hl_class" href="classgridfire_1_1policy_1_1MainSequencePolicy.html">gridfire::policy::MainSequencePolicy</a> stellarPolicy(netIn.composition);</div>
-<div class="line">    <a class="code hl_class" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a>&amp; engine = stellarPolicy.construct();</div>
+<div class="line">    <a class="code hl_class" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a> stellarPolicy(netIn.composition);</div>
+<div class="line">    <a class="code hl_class" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a>&amp; engine = stellarPolicy.construct();</div>
 <div class="line">    </div>
-<div class="line">    <a class="code hl_class" href="classgridfire_1_1solver_1_1CVODESolverStrategy.html">gridfire::solver::CVODESolverStrategy</a> solver(adaptView);</div>
+<div class="line">    gridfire::solver::CVODESolverStrategy solver(adaptView);</div>
 <div class="line">    solver.set_callback(callback);</div>
 <div class="line"> </div>
 <div class="line">    <span class="comment">// 6. Prepare input conditions</span></div>
-<div class="line">    <a class="code hl_struct" href="structgridfire_1_1NetIn.html">gridfire::NetIn</a> input{</div>
+<div class="line">    <a class="code hl_struct" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> input{</div>
 <div class="line">        comp,     <span class="comment">// composition</span></div>
 <div class="line">        1.5e7,      <span class="comment">// temperature [K]</span></div>
 <div class="line">        1.5e2,      <span class="comment">// density [g/cm^3]</span></div>
@@ -574,45 +579,37 @@ Callback and Policy Example</h3>
 <div class="line">    };</div>
 <div class="line"> </div>
 <div class="line">    <span class="comment">// 7. Execute integration</span></div>
-<div class="line">    <a class="code hl_struct" href="structgridfire_1_1NetOut.html">gridfire::NetOut</a> output = solver.evaluate(input);</div>
+<div class="line">    <a class="code hl_struct" href="structgridfire_1_1_net_out.html">gridfire::NetOut</a> output = solver.evaluate(input);</div>
 <div class="line">    std::cout &lt;&lt; <span class="stringliteral">&quot;Final results are: &quot;</span> &lt;&lt; output &lt;&lt; std::endl;</div>
 <div class="line">}</div>
-<div class="ttc" id="aclassgridfire_1_1engine_1_1DynamicEngine_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></div><div class="ttdoc">Abstract class for engines supporting Jacobian and stoichiometry operations.</div><div class="ttdef"><b>Definition</b> engine_abstract.h:175</div></div>
-<div class="ttc" id="aclassgridfire_1_1engine_1_1DynamicEngine_html_ac0f40017603e8e6887b75dc7360d7c5e"><div class="ttname"><a href="classgridfire_1_1engine_1_1DynamicEngine.html#ac0f40017603e8e6887b75dc7360d7c5e">gridfire::engine::DynamicEngine::getSpeciesIndex</a></div><div class="ttdeci">virtual size_t getSpeciesIndex(const fourdst::atomic::Species &amp;species) const =0</div><div class="ttdoc">Get the index of a species in the network.</div></div>
-<div class="ttc" id="aclassgridfire_1_1policy_1_1MainSequencePolicy_html"><div class="ttname"><a href="classgridfire_1_1policy_1_1MainSequencePolicy.html">gridfire::policy::MainSequencePolicy</a></div><div class="ttdoc">A NetworkPolicy for building reaction networks suitable for low-mass main-sequence stars.</div><div class="ttdef"><b>Definition</b> stellar_policy.h:60</div></div>
-<div class="ttc" id="aclassgridfire_1_1solver_1_1CVODESolverStrategy_html"><div class="ttname"><a href="classgridfire_1_1solver_1_1CVODESolverStrategy.html">gridfire::solver::CVODESolverStrategy</a></div><div class="ttdoc">Stiff ODE integrator backed by SUNDIALS CVODE (BDF) for network + energy.</div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:81</div></div>
-<div class="ttc" id="astructgridfire_1_1NetIn_html"><div class="ttname"><a href="structgridfire_1_1NetIn.html">gridfire::NetIn</a></div><div class="ttdef"><b>Definition</b> types.h:27</div></div>
-<div class="ttc" id="astructgridfire_1_1NetOut_html"><div class="ttname"><a href="structgridfire_1_1NetOut.html">gridfire::NetOut</a></div><div class="ttdef"><b>Definition</b> types.h:37</div></div>
-<div class="ttc" id="astructgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext_html"><div class="ttname"><a href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html">gridfire::solver::CVODESolverStrategy::TimestepContext</a></div><div class="ttdoc">Immutable view of the current integration state passed to callbacks.</div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:173</div></div>
-<div class="ttc" id="astructgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext_html_a0b39f0d207181840efacb64417b492ae"><div class="ttname"><a href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#a0b39f0d207181840efacb64417b492ae">gridfire::solver::CVODESolverStrategy::TimestepContext::t</a></div><div class="ttdeci">const double t</div><div class="ttdoc">Current integration time [s].</div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:175</div></div>
-<div class="ttc" id="astructgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext_html_a5a457651dcb9d4a66ed219ddf7095313"><div class="ttname"><a href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#a5a457651dcb9d4a66ed219ddf7095313">gridfire::solver::CVODESolverStrategy::TimestepContext::engine</a></div><div class="ttdeci">const engine::DynamicEngine &amp; engine</div><div class="ttdoc">Reference to the engine.</div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:182</div></div>
-<div class="ttc" id="astructgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext_html_aaae3c42b9172be4d501f022e67f5a6f6"><div class="ttname"><a href="structgridfire_1_1solver_1_1CVODESolverStrategy_1_1TimestepContext.html#aaae3c42b9172be4d501f022e67f5a6f6">gridfire::solver::CVODESolverStrategy::TimestepContext::state</a></div><div class="ttdeci">const N_Vector &amp; state</div><div class="ttdoc">Current CVODE state vector (N_Vector).</div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:176</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_dynamic_engine_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a></div><div class="ttdoc">Abstract class for engines supporting Jacobian and stoichiometry operations.</div><div class="ttdef"><b>Definition</b> engine_abstract.h:183</div></div>
+<div class="ttc" id="aclassgridfire_1_1policy_1_1_main_sequence_policy_html"><div class="ttname"><a href="classgridfire_1_1policy_1_1_main_sequence_policy.html">gridfire::policy::MainSequencePolicy</a></div><div class="ttdoc">A NetworkPolicy for building reaction networks suitable for low-mass main-sequence stars.</div><div class="ttdef"><b>Definition</b> stellar_policy.h:59</div></div>
+<div class="ttc" id="astructgridfire_1_1_net_in_html"><div class="ttname"><a href="structgridfire_1_1_net_in.html">gridfire::NetIn</a></div><div class="ttdef"><b>Definition</b> types.h:27</div></div>
+<div class="ttc" id="astructgridfire_1_1_net_out_html"><div class="ttname"><a href="structgridfire_1_1_net_out.html">gridfire::NetOut</a></div><div class="ttdef"><b>Definition</b> types.h:37</div></div>
 </div><!-- fragment --><p> &gt;<b>Note:</b> If you want to see exactly why each repartitioning stage was triggered in a human readable manner add the flag True to <code>solver.evaluate</code> (<code>solver.evaluate(input, true)</code>).</p>
 <p>&gt;<b>Note:</b> A fully detailed list of all available information in the TimestepContext struct is available in the API documentation.</p>
 <p>&gt;<b>Note:</b> The order of species in the boost state vector (<code>ctx.state</code>) is <b>not guaranteed</b> to be any particular order run over run. Therefore, in order to reliably extract </p><blockquote class="doxtable">
-<p>&zwj;values from it, you <b>must</b> use the <code>getSpeciesIndex</code> method of the engine to get the index of the species you are interested in (these will always be in the same order). </p>
+<p>values from it, you <b>must</b> use the <code>getSpeciesIndex</code> method of the engine to get the index of the species you are interested in (these will always be in the same order). </p>
 </blockquote>
 <p>If you wish to know what is provided by a solver context without investigating the code you can simply do</p>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line"><span class="keywordtype">void</span> callback(<span class="keyword">const</span> <a class="code hl_struct" href="classgridfire_1_1solver_1_1SolverContextBase.html">gridfire::solver::SolverContextBase</a>&amp; context) {</div>
+<div class="fragment"><div class="line"><span class="keywordtype">void</span> callback(<span class="keyword">const</span> <a class="code hl_struct" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a>&amp; context) {</div>
 <div class="line">    <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>&amp; [parameterName, description] : context.describe()) {</div>
 <div class="line">        std::cout &lt;&lt; parameterName &lt;&lt; <span class="stringliteral">&quot;: &quot;</span> &lt;&lt; description &lt;&lt; <span class="stringliteral">&quot;\n&quot;</span>;</div>
 <div class="line">    }</div>
 <div class="line">    std::cout &lt;&lt; std::flush();</div>
 <div class="line">    exit(0);</div>
 <div class="line">}</div>
-<div class="ttc" id="aclassgridfire_1_1solver_1_1SolverContextBase_html"><div class="ttname"><a href="classgridfire_1_1solver_1_1SolverContextBase.html">gridfire::solver::SolverContextBase</a></div><div class="ttdoc">Base class for solver callback contexts.</div><div class="ttdef"><b>Definition</b> strategy_abstract.h:21</div></div>
+<div class="ttc" id="astructgridfire_1_1solver_1_1_solver_context_base_html"><div class="ttname"><a href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></div><div class="ttdef"><b>Definition</b> strategy_abstract.h:16</div></div>
 </div><!-- fragment --><p>If you set this as the callback (to any solver strategy) it will print out the available parameters and what they are and then close the code. This is useful when writing new callbacks.</p>
 <h4><a class="anchor" id="autotoc_md53"></a>
 Callback Context</h4>
 <p>Since each solver may provide different context to the callback function, and it may be frustrating to refer to the documentation every time, we also enforce that all solvers must implement a <code>descripe_callback_context</code> method which returns a vector of tuples&lt;string, string&gt; where the first element is the name of the field and the second is its datatype. It is on the developer to ensure that this information is accurate.</p>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line">...</div>
+<div class="fragment"><div class="line">...</div>
 <div class="line">std::cout &lt;&lt; solver.describe_callback_context() &lt;&lt; std::endl;</div>
 </div><!-- fragment --><h2><a class="anchor" id="autotoc_md54"></a>
 Python</h2>
 <p>The python bindings intentionally look <b>very</b> similar to the C++ code. Generally all examples can be adapted to python by replacing includes of paths with imports of modules such that</p>
-<p><code>#include "gridfire/engine/GraphEngine.h"</code> becomes <code>import <a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html" title="A reaction network engine that uses a graph-based representation.">gridfire.engine.GraphEngine</a></code></p>
+<p><code>#include "gridfire/engine/GraphEngine.h"</code> becomes <code>import <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">gridfire.engine.GraphEngine</a></code></p>
 <p>All GridFire C++ types have been bound and can be passed around as one would expect.</p>
 <h3><a class="anchor" id="autotoc_md55"></a>
 Python Example for End Users</h3>
@@ -715,22 +712,24 @@ Python Example for End Users</h3>
 <div class="line">  args = parser.parse_args()</div>
 <div class="line">  main(args.temp, args.rho, args.tMax)</div>
 <div class="ttc" id="anamespacegridfire_1_1policy_html"><div class="ttname"><a href="namespacegridfire_1_1policy.html">gridfire::policy</a></div><div class="ttdef"><b>Definition</b> chains.h:25</div></div>
-<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:46</div></div>
+<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> GridSolver.h:7</div></div>
 </div><!-- fragment --></li>
 </ol>
 <h1><a class="anchor" id="autotoc_md56"></a>
 External Usage</h1>
 <p>C++ does not have a stable ABI nor does it make any strong guarantees about stl container layouts between compiler versions. Therefore, GridFire includes a set of stable C bindings which can be used to interface with a limited subset of GridFire functionality from other languages.</p>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> These bindings are not intended to allow GridFire to be extended from other languages; rather, they are intended to allow GridFire to be used as a black-box library from other languages. </p>
+<p><b>Note:</b> These bindings are not intended to allow GridFire to be extended from other languages; rather, they are intended to allow GridFire to be used as a black-box library from other languages. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> One assumption for external usage is that the ordering of the species list will not change. That is to say that whatever order the array used to register the species is will be assumed to always be the order used when passing abundance arrays to and from GridFire. </p>
+<p><b>Note:</b> One assumption for external usage is that the ordering of the species list will not change. That is to say that whatever order the array used to register the species is will be assumed to always be the order used when passing abundance arrays to and from GridFire. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> Because the C API does not pass the general Composition object a <code>mass_lost</code> output parameter has been added to the evolve calls, this tracks the total mass in species which have not been registered with the C API GridFire by the caller </p>
+<p><b>Note:</b> Because the C API does not pass the general Composition object a <code>mass_lost</code> output parameter has been added to the evolve calls, this tracks the total mass in species which have not been registered with the C API GridFire by the caller </p>
 </blockquote>
-<p>## C API Overview In general when using the C API the workflow is to</p>
+<h2><a class="anchor" id="autotoc_md57"></a>
+C API Overview</h2>
+<p>In general when using the C API the workflow is to </p>
 <ol type="1">
 <li>create a <code>gf_context</code> pointer. This object holds the state of GridFire so that it does not need to be re-initialized for each call.</li>
 <li>call initialization routines on the context to set up the engine and solver you wish to use.</li>
@@ -738,10 +737,9 @@ External Usage</h1>
 <li>At each state check the ret code of the function to ensure that no errors occurred. Valid ret-codes are 0 and 1. All other ret codes indicate an error.</li>
 <li>Finally, call <code>gf_free</code> to free the context and all associated memory.</li>
 </ol>
-<h3><a class="anchor" id="autotoc_md57"></a>
+<h3><a class="anchor" id="autotoc_md58"></a>
 C Example</h3>
-<div class="fragment"><div class="line"> ++</div>
-<div class="line"><span class="preprocessor">#include &quot;<a class="code" href="gridfire__extern_8h.html">gridfire/extern/gridfire_extern.h</a>&quot;</span></div>
+<div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="gridfire__extern_8h.html">gridfire/extern/gridfire_extern.h</a>&quot;</span></div>
 <div class="line"><span class="preprocessor">#include &lt;stdio.h&gt;</span></div>
 <div class="line"> </div>
 <div class="line"><span class="preprocessor">#define NUM_SPECIES 8</span></div>
@@ -755,7 +753,7 @@ C Example</h3>
 <div class="line"><span class="preprocessor">    }</span></div>
 <div class="line"> </div>
 <div class="line"><span class="keywordtype">int</span> main() {</div>
-<div class="line">    <span class="keywordtype">void</span>* gf_context = <a class="code hl_function" href="gridfire__extern_8h.html#aa06d49e737afd147061f4f15e6e5afcc">gf_init</a>();</div>
+<div class="line">    <span class="keywordtype">void</span>* gf_context = <a class="code hl_function" href="gridfire__extern_8h.html#a0d42f6060caa8e73b2ef36f591a12034">gf_init</a>();</div>
 <div class="line"> </div>
 <div class="line">    <span class="keyword">const</span> <span class="keywordtype">char</span>* species_names[NUM_SPECIES];</div>
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@@ -774,7 +772,7 @@ C Example</h3>
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-<div class="line">    ret = <a class="code hl_function" href="gridfire__extern_8h.html#a57d58696555e3402eddd043cea125f5e">gf_construct_solver_from_engine</a>(gf_context, <span class="stringliteral">&quot;CVODE&quot;</span>);</div>
+<div class="line">    ret = <a class="code hl_function" href="gridfire__extern_8h.html#aed17ad088b2c25c0c2bf5549527e53fd">gf_construct_solver_from_engine</a>(gf_context, <span class="stringliteral">&quot;CVODE&quot;</span>);</div>
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 <div class="line">    <span class="comment">// When using the C API it is assumed that the caller will ensure that the output arrays are large enough to hold the results.</span></div>
@@ -786,7 +784,7 @@ C Example</h3>
 <div class="line">    <span class="keywordtype">double</span> neutrino_flux;</div>
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-<div class="line">    ret = <a class="code hl_function" href="gridfire__extern_8h.html#abde0ca38a62727d2f76f0bcd920bf124">gf_evolve</a>(</div>
+<div class="line">    ret = <a class="code hl_function" href="gridfire__extern_8h.html#a807dc807fea7c92f328849aea7572af4">gf_evolve</a>(</div>
 <div class="line">        gf_context,</div>
 <div class="line">        abundances,</div>
 <div class="line">        NUM_SPECIES,</div>
@@ -815,18 +813,18 @@ C Example</h3>
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-<div class="line">    <a class="code hl_function" href="gridfire__extern_8h.html#a5ddf1a13fef574a435fd76a7fb1bb374">gf_free</a>(gf_context);</div>
+<div class="line">    <a class="code hl_function" href="gridfire__extern_8h.html#a1a963d1279164f2a870be4e9e1dba1d5">gf_free</a>(gf_context);</div>
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 <div class="ttc" id="agridfire__extern_8h_html"><div class="ttname"><a href="gridfire__extern_8h.html">gridfire_extern.h</a></div></div>
-<div class="ttc" id="agridfire__extern_8h_html_a57d58696555e3402eddd043cea125f5e"><div class="ttname"><a href="gridfire__extern_8h.html#a57d58696555e3402eddd043cea125f5e">gf_construct_solver_from_engine</a></div><div class="ttdeci">int gf_construct_solver_from_engine(void *ptr, const char *solver_name)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:70</div></div>
-<div class="ttc" id="agridfire__extern_8h_html_a5ddf1a13fef574a435fd76a7fb1bb374"><div class="ttname"><a href="gridfire__extern_8h.html#a5ddf1a13fef574a435fd76a7fb1bb374">gf_free</a></div><div class="ttdeci">void gf_free(void *ctx)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:11</div></div>
-<div class="ttc" id="agridfire__extern_8h_html_aa06d49e737afd147061f4f15e6e5afcc"><div class="ttname"><a href="gridfire__extern_8h.html#aa06d49e737afd147061f4f15e6e5afcc">gf_init</a></div><div class="ttdeci">void * gf_init()</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:7</div></div>
-<div class="ttc" id="agridfire__extern_8h_html_abde0ca38a62727d2f76f0bcd920bf124"><div class="ttname"><a href="gridfire__extern_8h.html#abde0ca38a62727d2f76f0bcd920bf124">gf_evolve</a></div><div class="ttdeci">int gf_evolve(void *ptr, const double *Y_in, size_t num_species, double T, double rho, double tMax, double dt0, double *Y_out, double *energy_out, double *dEps_dT, double *dEps_dRho, double *specific_neutrino_energy_loss, double *specific_neutrino_flux, double *mass_lost)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:87</div></div>
-<div class="ttc" id="agridfire__extern_8h_html_ae70b23310adcce0925900ca00a18a4a6"><div class="ttname"><a href="gridfire__extern_8h.html#ae70b23310adcce0925900ca00a18a4a6">gf_construct_engine_from_policy</a></div><div class="ttdeci">int gf_construct_engine_from_policy(void *ptr, const char *policy_name, const double *abundances, size_t num_species)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:39</div></div>
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-</div><!-- fragment --><h2><a class="anchor" id="autotoc_md58"></a>
+<div class="ttc" id="agridfire__extern_8h_html_a0d42f6060caa8e73b2ef36f591a12034"><div class="ttname"><a href="gridfire__extern_8h.html#a0d42f6060caa8e73b2ef36f591a12034">gf_init</a></div><div class="ttdeci">void * gf_init(const enum GF_TYPE type)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:117</div></div>
+<div class="ttc" id="agridfire__extern_8h_html_a1a963d1279164f2a870be4e9e1dba1d5"><div class="ttname"><a href="gridfire__extern_8h.html#a1a963d1279164f2a870be4e9e1dba1d5">gf_free</a></div><div class="ttdeci">int gf_free(const enum GF_TYPE type, void *ctx)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:127</div></div>
+<div class="ttc" id="agridfire__extern_8h_html_a807dc807fea7c92f328849aea7572af4"><div class="ttname"><a href="gridfire__extern_8h.html#a807dc807fea7c92f328849aea7572af4">gf_evolve</a></div><div class="ttdeci">int gf_evolve(enum GF_TYPE type, void *ptr, const void *Y_in, size_t num_species, const void *T, const void *rho, double tMax, double dt0, void *Y_out, void *energy_out, void *dEps_dT, void *dEps_dRho, void *specific_neutrino_energy_loss, void *specific_neutrino_flux, void *mass_lost)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:207</div></div>
+<div class="ttc" id="agridfire__extern_8h_html_ae70b23310adcce0925900ca00a18a4a6"><div class="ttname"><a href="gridfire__extern_8h.html#ae70b23310adcce0925900ca00a18a4a6">gf_construct_engine_from_policy</a></div><div class="ttdeci">int gf_construct_engine_from_policy(void *ptr, const char *policy_name, const double *abundances, size_t num_species)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:184</div></div>
+<div class="ttc" id="agridfire__extern_8h_html_aed17ad088b2c25c0c2bf5549527e53fd"><div class="ttname"><a href="gridfire__extern_8h.html#aed17ad088b2c25c0c2bf5549527e53fd">gf_construct_solver_from_engine</a></div><div class="ttdeci">int gf_construct_solver_from_engine(void *ptr)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:197</div></div>
+<div class="ttc" id="agridfire__extern_8h_html_af7e09bf5cf979211260e715faaa3a680"><div class="ttname"><a href="gridfire__extern_8h.html#af7e09bf5cf979211260e715faaa3a680">gf_register_species</a></div><div class="ttdeci">int gf_register_species(void *ptr, const int num_species, const char **species_names)</div><div class="ttdef"><b>Definition</b> gridfire_extern.cpp:158</div></div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md59"></a>
 Fortran API Overview</h2>
 <p>GridFire makes use of the stable C API and Fortran 2003's <code>iso_c_bindings</code> to provide a Fortran interface for legacy code. The fortran interface is designed to be very similar to the C API and exposes the same functionality.</p>
 <ol type="1">
@@ -839,13 +837,13 @@ Fortran API Overview</h2>
 <li><code>GridFiregff_free</code>: Frees the GridFire context and associated resources.</li>
 </ol>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> You must instantiate a <code>GridFire</code> type object to access these methods. </p>
+<p><b>Note:</b> You must instantiate a <code>GridFire</code> type object to access these methods. </p>
 </blockquote>
 <blockquote class="doxtable">
-<p>&zwj;<b>Note:</b> free and init have had the <code>gff_</code> prefix (GridFire Fortran) to avoid name clashes with common Fortran functions. </p>
+<p><b>Note:</b> free and init have had the <code>gff_</code> prefix (GridFire Fortran) to avoid name clashes with common Fortran functions. </p>
 </blockquote>
 <p>When building GridFire a fortran module file <code>gridfire_mod.mod</code> is generated which contains all the necessary bindings to use GridFire from Fortran. You must also link your code against the C API library <code>libgridfire_extern</code>.</p>
-<h3><a class="anchor" id="autotoc_md59"></a>
+<h3><a class="anchor" id="autotoc_md60"></a>
 Fortran Example</h3>
 <div class="fragment"><div class="line"><span class="keyword">program</span> main</div>
 <div class="line">    <span class="keywordtype">use </span>iso_c_binding</div>
@@ -937,7 +935,7 @@ Fortran Example</h3>
 <div class="line"> </div>
 <div class="line"><span class="keyword">end program </span>main</div>
 <div class="ttc" id="anamespacegridfire__mod_html"><div class="ttname"><a href="namespacegridfire__mod.html">gridfire_mod</a></div><div class="ttdef"><b>Definition</b> gridfire_mod.f90:1</div></div>
-</div><!-- fragment --><h1><a class="anchor" id="autotoc_md60"></a>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md61"></a>
 Related Projects</h1>
 <p>GridFire integrates with and builds upon several key 4D-STAR libraries:</p>
 <ul>
@@ -949,12 +947,13 @@ Related Projects</h1>
 <li><a href="https://github.com/4D-STAR/libplugin">libplugin</a>: Dynamically loadable plugin framework. </li>
 </ul>
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+<title>Node1</title>
+<g id="a_Node000001"><a xlink:href="structstd_1_1formatter_3_01gridfire_1_1policy_1_1_main_sequence_policy_01_4.html" target="_top" xlink:title=" ">
+<polygon fill="white" stroke="#666666" points="316.25,-30.5 162.25,-30.5 162.25,0 316.25,0 316.25,-30.5"/>
+<text xml:space="preserve" text-anchor="start" x="170.25" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">std::formatter&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="239.25" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">::policy::MainSequencePolicy &gt;</text>
+</a>
+</g>
+</g>
+<!-- Node0&#45;&gt;Node1 -->
+<g id="edge119_Node000000_Node000001" class="edge">
+<title>Node0&#45;&gt;Node1</title>
+<g id="a_edge119_Node000000_Node000001"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M138,-15.25C145.95,-15.25 154.05,-15.25 162.02,-15.25"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="138.01,-11.75 128.01,-15.25 138.01,-18.75 138.01,-11.75"/>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs/html/inherit_graph_86.map b/docs/html/inherit_graph_86.map
new file mode 100644
index 00000000..583b310a
--- /dev/null
+++ b/docs/html/inherit_graph_86.map
@@ -0,0 +1,3 @@
+<map id="Graphical Class Hierarchy" name="Graphical Class Hierarchy">
+<area shape="rect" id="Node000000" href="$structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1_table_axes_01_4.html" title=" " alt="" coords="5,5,184,46"/>
+</map>
diff --git a/docs/html/inherit_graph_86.md5 b/docs/html/inherit_graph_86.md5
new file mode 100644
index 00000000..4e5e9890
--- /dev/null
+++ b/docs/html/inherit_graph_86.md5
@@ -0,0 +1 @@
+20239d17376a4d0bb7a9ea37c444a7b9
\ No newline at end of file
diff --git a/docs/html/inherit_graph_86.svg b/docs/html/inherit_graph_86.svg
new file mode 100644
index 00000000..adb206e6
--- /dev/null
+++ b/docs/html/inherit_graph_86.svg
@@ -0,0 +1,22 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 14.1.2 (20260124.0452)
+ -->
+<!-- Title: Graphical Class Hierarchy Pages: 1 -->
+<svg width="142pt" height="39pt"
+ viewBox="0.00 0.00 142.00 39.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 34.5)">
+<title>Graphical Class Hierarchy</title>
+<!-- Node0 -->
+<g id="Node000000" class="node">
+<title>Node0</title>
+<g id="a_Node000000"><a xlink:href="structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1_table_axes_01_4.html" target="_top" xlink:title=" ">
+<polygon fill="white" stroke="#666666" points="133.75,-30.5 0,-30.5 0,0 133.75,0 133.75,-30.5"/>
+<text xml:space="preserve" text-anchor="start" x="8" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">std::hash&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="66.88" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">::rates::weak::TableAxes &gt;</text>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs/html/inherit_graph_87.map b/docs/html/inherit_graph_87.map
new file mode 100644
index 00000000..c7c5e3e1
--- /dev/null
+++ b/docs/html/inherit_graph_87.map
@@ -0,0 +1,3 @@
+<map id="Graphical Class Hierarchy" name="Graphical Class Hierarchy">
+<area shape="rect" id="Node000000" href="$structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html" title=" " alt="" coords="5,5,153,46"/>
+</map>
diff --git a/docs/html/inherit_graph_87.md5 b/docs/html/inherit_graph_87.md5
new file mode 100644
index 00000000..d30ab59d
--- /dev/null
+++ b/docs/html/inherit_graph_87.md5
@@ -0,0 +1 @@
+bde4fa15f2aa21d2a66b0a09a529fdf9
\ No newline at end of file
diff --git a/docs/html/inherit_graph_87.svg b/docs/html/inherit_graph_87.svg
new file mode 100644
index 00000000..371be47a
--- /dev/null
+++ b/docs/html/inherit_graph_87.svg
@@ -0,0 +1,22 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 14.1.2 (20260124.0452)
+ -->
+<!-- Title: Graphical Class Hierarchy Pages: 1 -->
+<svg width="119pt" height="39pt"
+ viewBox="0.00 0.00 119.00 39.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 34.5)">
+<title>Graphical Class Hierarchy</title>
+<!-- Node0 -->
+<g id="Node000000" class="node">
+<title>Node0</title>
+<g id="a_Node000000"><a xlink:href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html" target="_top" xlink:title=" ">
+<polygon fill="white" stroke="#666666" points="110.5,-30.5 0,-30.5 0,0 110.5,0 110.5,-30.5"/>
+<text xml:space="preserve" text-anchor="start" x="8" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">std::hash&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="55.25" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::Reaction &gt;</text>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs/html/inherit_graph_88.map b/docs/html/inherit_graph_88.map
new file mode 100644
index 00000000..978deb2c
--- /dev/null
+++ b/docs/html/inherit_graph_88.map
@@ -0,0 +1,3 @@
+<map id="Graphical Class Hierarchy" name="Graphical Class Hierarchy">
+<area shape="rect" id="Node000000" href="$structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html" title=" " alt="" coords="5,5,173,46"/>
+</map>
diff --git a/docs/html/inherit_graph_88.md5 b/docs/html/inherit_graph_88.md5
new file mode 100644
index 00000000..02d1e1dc
--- /dev/null
+++ b/docs/html/inherit_graph_88.md5
@@ -0,0 +1 @@
+cdc9321e472986420a89ebe56fce36de
\ No newline at end of file
diff --git a/docs/html/inherit_graph_88.svg b/docs/html/inherit_graph_88.svg
new file mode 100644
index 00000000..807795b1
--- /dev/null
+++ b/docs/html/inherit_graph_88.svg
@@ -0,0 +1,22 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 14.1.2 (20260124.0452)
+ -->
+<!-- Title: Graphical Class Hierarchy Pages: 1 -->
+<svg width="134pt" height="39pt"
+ viewBox="0.00 0.00 134.00 39.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 34.5)">
+<title>Graphical Class Hierarchy</title>
+<!-- Node0 -->
+<g id="Node000000" class="node">
+<title>Node0</title>
+<g id="a_Node000000"><a xlink:href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html" target="_top" xlink:title=" ">
+<polygon fill="white" stroke="#666666" points="125.5,-30.5 0,-30.5 0,0 125.5,0 125.5,-30.5"/>
+<text xml:space="preserve" text-anchor="start" x="8" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">std::hash&lt; gridfire</text>
+<text xml:space="preserve" text-anchor="middle" x="62.75" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">::reaction::ReactionSet &gt;</text>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs/html/inherit_graph_9.map b/docs/html/inherit_graph_9.map
index d1ef44e3..4d8c4f80 100644
--- a/docs/html/inherit_graph_9.map
+++ b/docs/html/inherit_graph_9.map
@@ -1,3 +1,3 @@
 <map id="Graphical Class Hierarchy" name="Graphical Class Hierarchy">
-<area shape="rect" id="Node000000" href="$structgridfire_1_1engine_1_1GraphEngine_1_1PrecomputedReaction.html" title=" " alt="" coords="5,5,216,45"/>
+<area shape="rect" id="Node000000" href="$structgridfire_1_1config_1_1_solver_config.html" title=" " alt="" coords="5,5,154,46"/>
 </map>
diff --git a/docs/html/inherit_graph_9.md5 b/docs/html/inherit_graph_9.md5
index 8ae6763e..e63d801f 100644
--- a/docs/html/inherit_graph_9.md5
+++ b/docs/html/inherit_graph_9.md5
@@ -1 +1 @@
-4c5f6e307958dff1e4e241ed4ba6c385
\ No newline at end of file
+9c2cd174dc391d3b1d526ef19db92518
\ No newline at end of file
diff --git a/docs/html/inherit_graph_9.svg b/docs/html/inherit_graph_9.svg
index 0bd48722..87be7cb5 100644
--- a/docs/html/inherit_graph_9.svg
+++ b/docs/html/inherit_graph_9.svg
@@ -1,20 +1,20 @@
 <?xml version="1.0" encoding="UTF-8" standalone="no"?>
 <!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
  "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
-<!-- Generated by graphviz version 2.43.0 (0)
+<!-- Generated by graphviz version 14.1.2 (20260124.0452)
  -->
 <!-- Title: Graphical Class Hierarchy Pages: 1 -->
-<svg width="166pt" height="38pt"
- viewBox="0.00 0.00 166.00 38.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
-<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 34)">
+<svg width="119pt" height="39pt"
+ viewBox="0.00 0.00 119.00 39.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 34.5)">
 <title>Graphical Class Hierarchy</title>
 <!-- Node0 -->
 <g id="Node000000" class="node">
 <title>Node0</title>
-<g id="a_Node000000"><a xlink:href="structgridfire_1_1engine_1_1GraphEngine_1_1PrecomputedReaction.html" target="_top" xlink:title=" ">
-<polygon fill="white" stroke="#666666" points="158,-30 0,-30 0,0 158,0 158,-30"/>
-<text text-anchor="start" x="8" y="-18" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::engine::GraphEngine</text>
-<text text-anchor="middle" x="79" y="-7" font-family="Helvetica,sans-Serif" font-size="10.00">::PrecomputedReaction</text>
+<g id="a_Node000000"><a xlink:href="structgridfire_1_1config_1_1_solver_config.html" target="_top" xlink:title=" ">
+<polygon fill="white" stroke="#666666" points="111.25,-30.5 0,-30.5 0,0 111.25,0 111.25,-30.5"/>
+<text xml:space="preserve" text-anchor="start" x="8" y="-17" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire::config::Solver</text>
+<text xml:space="preserve" text-anchor="middle" x="55.62" y="-5.75" font-family="Helvetica,sans-Serif" font-size="10.00">Config</text>
 </a>
 </g>
 </g>
diff --git a/docs/html/inherits.html b/docs/html/inherits.html
index 2afcf2f2..e1044e01 100644
--- a/docs/html/inherits.html
+++ b/docs/html/inherits.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Class Hierarchy</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('hierarchy.html',''); initResizable(); });
+$(function(){initNavTree('hierarchy.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
@@ -98,80 +105,102 @@ $(document).ready(function(){initNavTree('hierarchy.html',''); initResizable();
 <div class="textblock">
 <p><a href="hierarchy.html">Go to the textual class hierarchy</a></p>
 </div><table border="0" cellspacing="10" cellpadding="0">
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_0.svg" width="459" height="115"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_1.svg" width="416" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_2.svg" width="204" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_3.svg" width="184" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_4.svg" width="926" height="279"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_5.svg" width="183" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_6.svg" width="403" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_7.svg" width="346" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_8.svg" width="222" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_9.svg" width="222" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_10.svg" width="206" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_11.svg" width="206" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_12.svg" width="206" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_13.svg" width="206" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_14.svg" width="194" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_15.svg" width="190" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_16.svg" width="282" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_17.svg" width="139" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_18.svg" width="432" height="166"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_19.svg" width="122" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_20.svg" width="134" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_21.svg" width="419" height="244"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_22.svg" width="232" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_23.svg" width="232" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_24.svg" width="232" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_25.svg" width="227" height="66"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_26.svg" width="454" height="102"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_27.svg" width="720" height="947"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_28.svg" width="304" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_29.svg" width="163" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_30.svg" width="163" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_31.svg" width="163" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_32.svg" width="163" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_33.svg" width="182" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_34.svg" width="183" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_35.svg" width="163" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_36.svg" width="206" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_37.svg" width="168" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_38.svg" width="163" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_39.svg" width="139" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_40.svg" width="162" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_41.svg" width="570" height="147"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_42.svg" width="140" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_43.svg" width="416" height="230"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_44.svg" width="243" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_45.svg" width="222" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_46.svg" width="506" height="102"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_47.svg" width="435" height="102"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_48.svg" width="540" height="302"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_49.svg" width="803" height="288"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_50.svg" width="138" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_51.svg" width="454" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_52.svg" width="422" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_53.svg" width="203" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_54.svg" width="203" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_55.svg" width="187" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_56.svg" width="170" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_57.svg" width="168" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_58.svg" width="164" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_59.svg" width="194" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_60.svg" width="170" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_61.svg" width="135" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_62.svg" width="1040" height="963"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_63.svg" width="218" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_64.svg" width="206" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_65.svg" width="174" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
-<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_66.svg" width="195" height="51"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_0.svg" width="430" height="118"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_1.svg" width="382" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_2.svg" width="260" height="86"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_3.svg" width="174" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_4.svg" width="178" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_5.svg" width="163" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_6.svg" width="163" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_7.svg" width="168" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_8.svg" width="190" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_9.svg" width="159" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_10.svg" width="163" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_11.svg" width="190" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_12.svg" width="167" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_13.svg" width="846" height="282"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_14.svg" width="166" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_15.svg" width="372" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_16.svg" width="320" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_17.svg" width="200" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_18.svg" width="214" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_19.svg" width="200" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_20.svg" width="184" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_21.svg" width="184" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_22.svg" width="184" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_23.svg" width="184" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_24.svg" width="175" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_25.svg" width="170" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_26.svg" width="576" height="150"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_27.svg" width="198" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_28.svg" width="434" height="262"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_29.svg" width="168" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_30.svg" width="251" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_31.svg" width="127" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_32.svg" width="394" height="167"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_33.svg" width="111" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_34.svg" width="122" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_35.svg" width="387" height="247"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_36.svg" width="211" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_37.svg" width="211" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_38.svg" width="211" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_39.svg" width="207" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_40.svg" width="195" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_41.svg" width="415" height="102"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_42.svg" width="667" height="967"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_43.svg" width="280" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_44.svg" width="147" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_45.svg" width="147" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_46.svg" width="147" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_47.svg" width="147" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_48.svg" width="167" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_49.svg" width="167" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_50.svg" width="148" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_51.svg" width="191" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_52.svg" width="156" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_53.svg" width="151" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_54.svg" width="127" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_55.svg" width="151" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_56.svg" width="126" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_57.svg" width="378" height="232"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_58.svg" width="524" height="102"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_59.svg" width="191" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_60.svg" width="190" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_61.svg" width="190" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_62.svg" width="448" height="102"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_63.svg" width="219" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_64.svg" width="386" height="167"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_65.svg" width="403" height="102"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_66.svg" width="492" height="387"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_67.svg" width="734" height="291"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_68.svg" width="123" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_69.svg" width="412" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_70.svg" width="384" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_71.svg" width="183" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_72.svg" width="183" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_73.svg" width="167" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_74.svg" width="167" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_75.svg" width="151" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_76.svg" width="154" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_77.svg" width="147" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_78.svg" width="172" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_79.svg" width="147" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
+<tr><td><iframe scrolling="no" frameborder="0" src="inherit_graph_80.svg" width="155" height="36"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></td></tr>
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+<tr class="memitem:aeaf76c43b8cc6ad20ab264bc9c1cc7e2" id="r_aeaf76c43b8cc6ad20ab264bc9c1cc7e2"><td class="memItemLeft" align="right" valign="top">integer(c_int) function&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aeaf76c43b8cc6ad20ab264bc9c1cc7e2">gf_construct_solver_from_engine</a> (ptr, solver_name)</td></tr>
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 </table>
 <h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
@@ -114,19 +121,12 @@ Public Member Functions</h2></td></tr>
         <tr>
           <td class="memname">integer(c_int) function gridfire_mod::gf_construct_solver_from_engine::gf_construct_solver_from_engine </td>
           <td>(</td>
-          <td class="paramtype">type(c_ptr), value&#160;</td>
-          <td class="paramname"><em>ptr</em>, </td>
+          <td class="paramtype">type(c_ptr), value</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">character(kind=c_char), dimension(*), intent(in)&#160;</td>
-          <td class="paramname"><em>solver_name</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">character(kind=c_char), dimension(*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>solver_name</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -142,7 +142,7 @@ Public Member Functions</h2></td></tr>
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire_mod::gf_evolve_c_array Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__array.html">gridfire_mod::gf_evolve_c_array</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__array.html#a3685f82bf2007c73cead610d502c077e">gf_evolve_c_array</a>(ctx_type, ptr, y_in, num_species, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nue_loss, nu_flux, mass_lost)</td><td class="entry"><a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__array.html">gridfire_mod::gf_evolve_c_array</a></td><td class="entry"></td></tr>
+</table></div><!-- contents -->
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diff --git a/docs/html/interfacegridfire__mod_1_1gf__evolve__c__array.html b/docs/html/interfacegridfire__mod_1_1gf__evolve__c__array.html
new file mode 100644
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: gridfire_mod::gf_evolve_c_array Interface Reference</title>
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="interfacegridfire__mod_1_1gf__evolve__c__array-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire_mod::gf_evolve_c_array Interface Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
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+<tr class="separator:a3685f82bf2007c73cead610d502c077e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a3685f82bf2007c73cead610d502c077e">&#9670;&#160;</a></span>gf_evolve_c_array()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">integer(c_int) function gridfire_mod::gf_evolve_c_array::gf_evolve_c_array </td>
+          <td>(</td>
+          <td class="paramtype">integer(c_int), value</td>          <td class="paramname"><span class="paramname"><em>ctx_type</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">type(c_ptr), value</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer(c_size_t), value</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
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+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nue_loss</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this interface was generated from the following file:<ul>
+<li>src/extern/fortran/<a class="el" href="gridfire__mod_8f90.html">gridfire_mod.f90</a></li>
+</ul>
+</div><!-- contents -->
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+<!-- start footer part -->
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+    <li class="navelem"><a class="el" href="namespacegridfire__mod.html">gridfire_mod</a></li><li class="navelem"><a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__array.html">gf_evolve_c_array</a></li>
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+  </ul>
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+</body>
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+</div><!--header-->
+<div class="contents">
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+<p>This is the complete list of members for <a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__scalar.html">gridfire_mod::gf_evolve_c_scalar</a>, including all inherited members.</p>
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+</table></div><!-- contents -->
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: gridfire_mod::gf_evolve_c_scalar Interface Reference</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<link href="doxygen.css" rel="stylesheet" type="text/css" />
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+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<script type="text/javascript">
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+</div>
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+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="interfacegridfire__mod_1_1gf__evolve__c__scalar-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire_mod::gf_evolve_c_scalar Interface Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a83fb2200772097ff0e653afc6701f0df" id="r_a83fb2200772097ff0e653afc6701f0df"><td class="memItemLeft" align="right" valign="top">integer(c_int) function&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a83fb2200772097ff0e653afc6701f0df">gf_evolve_c_scalar</a> (ctx_type, ptr, y_in, num_species, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nue_loss, nu_flux, mass_lost)</td></tr>
+<tr class="separator:a83fb2200772097ff0e653afc6701f0df"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a83fb2200772097ff0e653afc6701f0df" name="a83fb2200772097ff0e653afc6701f0df"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a83fb2200772097ff0e653afc6701f0df">&#9670;&#160;</a></span>gf_evolve_c_scalar()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">integer(c_int) function gridfire_mod::gf_evolve_c_scalar::gf_evolve_c_scalar </td>
+          <td>(</td>
+          <td class="paramtype">integer(c_int), value</td>          <td class="paramname"><span class="paramname"><em>ctx_type</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">type(c_ptr), value</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer(c_size_t), value</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(*), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nue_loss</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this interface was generated from the following file:<ul>
+<li>src/extern/fortran/<a class="el" href="gridfire__mod_8f90.html">gridfire_mod.f90</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire__mod.html">gridfire_mod</a></li><li class="navelem"><a class="el" href="interfacegridfire__mod_1_1gf__evolve__c__scalar.html">gf_evolve_c_scalar</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
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+</body>
+</html>
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+[
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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@@ -36,19 +38,24 @@
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 /* @license-end */
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
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+  <tr class="even"><td class="entry"><a class="el" href="interfacegridfire__mod_1_1gf__free.html#a20869217473db9ea465475d451010dee">gf_free</a>(ctx_type, ptr)</td><td class="entry"><a class="el" href="interfacegridfire__mod_1_1gf__free.html">gridfire_mod::gf_free</a></td><td class="entry"></td></tr>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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-          <td class="paramtype">type(c_ptr), value&#160;</td>
-          <td class="paramname"><em>gf</em></td><td>)</td>
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 /* @license-end */
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <title>GridFire: gridfire_mod::gf_get_last_error_message Interface Reference</title>
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
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 </table>
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+<!-- Generated by Doxygen 1.13.2 -->
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 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
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+  initMenu('',true,false,'search.php','Search',true);
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 <script type="text/javascript">
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+$(function(){initNavTree('interfacegridfire__mod_1_1gf__get__last__error__message.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
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           <td>(</td>
-          <td class="paramtype">type(c_ptr), value&#160;</td>
-          <td class="paramname"><em>ptr</em></td><td>)</td>
+          <td class="paramtype">type(c_ptr), value</td>          <td class="paramname"><span class="paramname"><em>ptr</em></span></td><td>)</td>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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index cb7798ee..0dcc546c 100644
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
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+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
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 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('interfacegridfire__mod_1_1gf__init.html',''); initResizable(); });
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+  <tr class="even"><td class="entry"><a class="el" href="interfacegridfire__mod_1_1gf__init.html#a52116e90ffd7e2748b8b7c731e703200">gf_init</a>(ctx_type)</td><td class="entry"><a class="el" href="interfacegridfire__mod_1_1gf__init.html">gridfire_mod::gf_init</a></td><td class="entry"></td></tr>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <script type="text/javascript" src="jquery.js"></script>
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+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<div class="contents">
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--- a/docs/html/jacobian_8h__dep__incl.map
+++ b/docs/html/jacobian_8h__dep__incl.map
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+/**
  * Copyright (c) 2007 Ariel Flesler - aflesler ○ gmail • com | https://github.com/flesler
  * Licensed under MIT
  * @author Ariel Flesler
  * @version 2.1.2
- */
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  PowerTip v1.3.1 (2018-04-15)
  https://stevenbenner.github.io/jquery-powertip/
@@ -19,7 +145,26 @@
  Released under MIT license.
  https://raw.github.com/stevenbenner/jquery-powertip/master/LICENSE.txt
 */
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tipMouseEnter(){if(session.activeHover){session.activeHover.data(DATA_DISPLAYCONTROLLER).cancel()}});tipElement.on("mouseleave"+EVENT_NAMESPACE,function tipMouseLeave(){if(session.activeHover){session.activeHover.data(DATA_DISPLAYCONTROLLER).hide()}})}tipElement.fadeIn(options.fadeInTime,function fadeInCallback(){if(!session.desyncTimeout){session.desyncTimeout=setInterval(closeDesyncedTip,500)}element.trigger("powerTipOpen")})}function hideTip(element){session.isClosing=true;session.isTipOpen=false;session.desyncTimeout=clearInterval(session.desyncTimeout);element.data(DATA_HASACTIVEHOVER,false);element.data(DATA_FORCEDOPEN,false);$document.off("click"+EVENT_NAMESPACE);tipElement.off(EVENT_NAMESPACE);tipElement.fadeOut(options.fadeOutTime,function fadeOutCallback(){var coords=new CSSCoordinates;session.activeHover=null;session.isClosing=false;session.isFixedTipOpen=false;tipElement.removeClass();coords.set("top",session.currentY+options.offset);coords.set("left",session.currentX+options.offset);tipElement.css(coords);element.trigger("powerTipClose")})}function positionTipOnCursor(){var tipWidth,tipHeight,coords,collisions,collisionCount;if(!session.isFixedTipOpen&&(session.isTipOpen||session.tipOpenImminent&&tipElement.data(DATA_HASMOUSEMOVE))){tipWidth=tipElement.outerWidth();tipHeight=tipElement.outerHeight();coords=new CSSCoordinates;coords.set("top",session.currentY+options.offset);coords.set("left",session.currentX+options.offset);collisions=getViewportCollisions(coords,tipWidth,tipHeight);if(collisions!==Collision.none){collisionCount=countFlags(collisions);if(collisionCount===1){if(collisions===Collision.right){coords.set("left",session.scrollLeft+session.windowWidth-tipWidth)}else if(collisions===Collision.bottom){coords.set("top",session.scrollTop+session.windowHeight-tipHeight)}}else{coords.set("left",session.currentX-tipWidth-options.offset);coords.set("top",session.currentY-tipHeight-options.offset)}}tipElement.css(coords)}}function positionTipOnElement(element){var priorityList,finalPlacement;if(options.smartPlacement||options.followMouse&&element.data(DATA_FORCEDOPEN)){priorityList=$.fn.powerTip.smartPlacementLists[options.placement];$.each(priorityList,function(idx,pos){var collisions=getViewportCollisions(placeTooltip(element,pos),tipElement.outerWidth(),tipElement.outerHeight());finalPlacement=pos;return collisions!==Collision.none})}else{placeTooltip(element,options.placement);finalPlacement=options.placement}tipElement.removeClass("w nw sw e ne se n s w se-alt sw-alt ne-alt nw-alt");tipElement.addClass(finalPlacement)}function placeTooltip(element,placement){var iterationCount=0,tipWidth,tipHeight,coords=new CSSCoordinates;coords.set("top",0);coords.set("left",0);tipElement.css(coords);do{tipWidth=tipElement.outerWidth();tipHeight=tipElement.outerHeight();coords=placementCalculator.compute(element,placement,tipWidth,tipHeight,options.offset);tipElement.css(coords)}while(++iterationCount<=5&&(tipWidth!==tipElement.outerWidth()||tipHeight!==tipElement.outerHeight()));return coords}function closeDesyncedTip(){var isDesynced=false,hasDesyncableCloseEvent=$.grep(["mouseleave","mouseout","blur","focusout"],function(eventType){return $.inArray(eventType,options.closeEvents)!==-1}).length>0;if(session.isTipOpen&&!session.isClosing&&!session.delayInProgress&&hasDesyncableCloseEvent){if(session.activeHover.data(DATA_HASACTIVEHOVER)===false||session.activeHover.is(":disabled")){isDesynced=true}else if(!isMouseOver(session.activeHover)&&!session.activeHover.is(":focus")&&!session.activeHover.data(DATA_FORCEDOPEN)){if(tipElement.data(DATA_MOUSEONTOTIP)){if(!isMouseOver(tipElement)){isDesynced=true}}else{isDesynced=true}}if(isDesynced){hideTip(session.activeHover)}}}this.showTip=beginShowTip;this.hideTip=hideTip;this.resetPosition=positionTipOnElement}function isSvgElement(element){return Boolean(window.SVGElement&&element[0]instanceof SVGElement)}function isMouseEvent(event){return Boolean(event&&$.inArray(event.type,MOUSE_EVENTS)>-1&&typeof event.pageX==="number")}function initTracking(){if(!session.mouseTrackingActive){session.mouseTrackingActive=true;getViewportDimensions();$(getViewportDimensions);$document.on("mousemove"+EVENT_NAMESPACE,trackMouse);$window.on("resize"+EVENT_NAMESPACE,trackResize);$window.on("scroll"+EVENT_NAMESPACE,trackScroll)}}function getViewportDimensions(){session.scrollLeft=$window.scrollLeft();session.scrollTop=$window.scrollTop();session.windowWidth=$window.width();session.windowHeight=$window.height()}function trackResize(){session.windowWidth=$window.width();session.windowHeight=$window.height()}function trackScroll(){var x=$window.scrollLeft(),y=$window.scrollTop();if(x!==session.scrollLeft){session.currentX+=x-session.scrollLeft;session.scrollLeft=x}if(y!==session.scrollTop){session.currentY+=y-session.scrollTop;session.scrollTop=y}}function trackMouse(event){session.currentX=event.pageX;session.currentY=event.pageY}function isMouseOver(element){var elementPosition=element.offset(),elementBox=element[0].getBoundingClientRect(),elementWidth=elementBox.right-elementBox.left,elementHeight=elementBox.bottom-elementBox.top;return session.currentX>=elementPosition.left&&session.currentX<=elementPosition.left+elementWidth&&session.currentY>=elementPosition.top&&session.currentY<=elementPosition.top+elementHeight}function getTooltipContent(element){var tipText=element.data(DATA_POWERTIP),tipObject=element.data(DATA_POWERTIPJQ),tipTarget=element.data(DATA_POWERTIPTARGET),targetElement,content;if(tipText){if($.isFunction(tipText)){tipText=tipText.call(element[0])}content=tipText}else if(tipObject){if($.isFunction(tipObject)){tipObject=tipObject.call(element[0])}if(tipObject.length>0){content=tipObject.clone(true,true)}}else if(tipTarget){targetElement=$("#"+tipTarget);if(targetElement.length>0){content=targetElement.html()}}return content}function getViewportCollisions(coords,elementWidth,elementHeight){var viewportTop=session.scrollTop,viewportLeft=session.scrollLeft,viewportBottom=viewportTop+session.windowHeight,viewportRight=viewportLeft+session.windowWidth,collisions=Collision.none;if(coords.top<viewportTop||Math.abs(coords.bottom-session.windowHeight)-elementHeight<viewportTop){collisions|=Collision.top}if(coords.top+elementHeight>viewportBottom||Math.abs(coords.bottom-session.windowHeight)>viewportBottom){collisions|=Collision.bottom}if(coords.left<viewportLeft||coords.right+elementWidth>viewportRight){collisions|=Collision.left}if(coords.left+elementWidth>viewportRight||coords.right<viewportLeft){collisions|=Collision.right}return collisions}function countFlags(value){var count=0;while(value){value&=value-1;count++}return count}return $.powerTip});/*!
+(function(root,factory){if(typeof define==="function"&&define.amd){define(["jquery"],factory)}else if(typeof module==="object"&&module.exports){module.exports=factory(require("jquery"))}else{factory(root.jQuery)}})(this,function($){var $document=$(document),$window=$(window),$body=$("body");var DATA_DISPLAYCONTROLLER="displayController",DATA_HASACTIVEHOVER="hasActiveHover",DATA_FORCEDOPEN="forcedOpen",DATA_HASMOUSEMOVE="hasMouseMove",DATA_MOUSEONTOTIP="mouseOnToPopup",DATA_ORIGINALTITLE="originalTitle",DATA_POWERTIP="powertip",DATA_POWERTIPJQ="powertipjq",DATA_POWERTIPTARGET="powertiptarget",EVENT_NAMESPACE=".powertip",RAD2DEG=180/Math.PI,MOUSE_EVENTS=["click","dblclick","mousedown","mouseup","mousemove","mouseover","mouseout","mouseenter","mouseleave","contextmenu"];var session={tooltips:null,isTipOpen:false,isFixedTipOpen:false,isClosing:false,tipOpenImminent:false,activeHover:null,currentX:0,currentY:0,previousX:0,previousY:0,desyncTimeout:null,closeDelayTimeout:null,mouseTrackingActive:false,
+delayInProgress:false,windowWidth:0,windowHeight:0,scrollTop:0,scrollLeft:0};var Collision={none:0,top:1,bottom:2,left:4,right:8};$.fn.powerTip=function(opts,arg){var targetElements=this,options,tipController;if(!targetElements.length){return targetElements}if($.type(opts)==="string"&&$.powerTip[opts]){return $.powerTip[opts].call(targetElements,targetElements,arg)}options=$.extend({},$.fn.powerTip.defaults,opts);tipController=new TooltipController(options);initTracking();targetElements.each(function elementSetup(){var $this=$(this),dataPowertip=$this.data(DATA_POWERTIP),dataElem=$this.data(DATA_POWERTIPJQ),dataTarget=$this.data(DATA_POWERTIPTARGET),title=$this.attr("title");if(!dataPowertip&&!dataTarget&&!dataElem&&title){$this.data(DATA_POWERTIP,title);$this.data(DATA_ORIGINALTITLE,title);$this.removeAttr("title")}$this.data(DATA_DISPLAYCONTROLLER,new DisplayController($this,options,tipController))});if(!options.manual){$.each(options.openEvents,function(idx,evt){if($.inArray(evt,options.closeEvents)>-1){
+targetElements.on(evt+EVENT_NAMESPACE,function elementToggle(event){$.powerTip.toggle(this,event)})}else{targetElements.on(evt+EVENT_NAMESPACE,function elementOpen(event){$.powerTip.show(this,event)})}});$.each(options.closeEvents,function(idx,evt){if($.inArray(evt,options.openEvents)<0){targetElements.on(evt+EVENT_NAMESPACE,function elementClose(event){$.powerTip.hide(this,!isMouseEvent(event))})}});targetElements.on("keydown"+EVENT_NAMESPACE,function elementKeyDown(event){if(event.keyCode===27){$.powerTip.hide(this,true)}})}return targetElements};$.fn.powerTip.defaults={fadeInTime:200,fadeOutTime:100,followMouse:false,popupId:"powerTip",popupClass:null,intentSensitivity:7,intentPollInterval:100,closeDelay:100,placement:"n",smartPlacement:false,offset:10,mouseOnToPopup:false,manual:false,openEvents:["mouseenter","focus"],closeEvents:["mouseleave","blur"]};$.fn.powerTip.smartPlacementLists={n:["n","ne","nw","s"],e:["e","ne","se","w","nw","sw","n","s","e"],s:["s","se","sw","n"],w:["w","nw","sw","e","ne","se",
+"n","s","w"],nw:["nw","w","sw","n","s","se","nw"],ne:["ne","e","se","n","s","sw","ne"],sw:["sw","w","nw","s","n","ne","sw"],se:["se","e","ne","s","n","nw","se"],"nw-alt":["nw-alt","n","ne-alt","sw-alt","s","se-alt","w","e"],"ne-alt":["ne-alt","n","nw-alt","se-alt","s","sw-alt","e","w"],"sw-alt":["sw-alt","s","se-alt","nw-alt","n","ne-alt","w","e"],"se-alt":["se-alt","s","sw-alt","ne-alt","n","nw-alt","e","w"]};$.powerTip={show:function apiShowTip(element,event){if(isMouseEvent(event)){trackMouse(event);session.previousX=event.pageX;session.previousY=event.pageY;$(element).data(DATA_DISPLAYCONTROLLER).show()}else{$(element).first().data(DATA_DISPLAYCONTROLLER).show(true,true)}return element},reposition:function apiResetPosition(element){$(element).first().data(DATA_DISPLAYCONTROLLER).resetPosition();return element},hide:function apiCloseTip(element,immediate){var displayController;immediate=element?immediate:true;if(element){displayController=$(element).first().data(DATA_DISPLAYCONTROLLER)}else if(
+session.activeHover){displayController=session.activeHover.data(DATA_DISPLAYCONTROLLER)}if(displayController){displayController.hide(immediate)}return element},toggle:function apiToggle(element,event){if(session.activeHover&&session.activeHover.is(element)){$.powerTip.hide(element,!isMouseEvent(event))}else{$.powerTip.show(element,event)}return element}};$.powerTip.showTip=$.powerTip.show;$.powerTip.closeTip=$.powerTip.hide;function CSSCoordinates(){var me=this;me.top="auto";me.left="auto";me.right="auto";me.bottom="auto";me.set=function(property,value){if($.isNumeric(value)){me[property]=Math.round(value)}}}function DisplayController(element,options,tipController){var hoverTimer=null,myCloseDelay=null;function openTooltip(immediate,forceOpen){cancelTimer();if(!element.data(DATA_HASACTIVEHOVER)){if(!immediate){session.tipOpenImminent=true;hoverTimer=setTimeout(function intentDelay(){hoverTimer=null;checkForIntent()},options.intentPollInterval)}else{if(forceOpen){element.data(DATA_FORCEDOPEN,true)}
+closeAnyDelayed();tipController.showTip(element)}}else{cancelClose()}}function closeTooltip(disableDelay){if(myCloseDelay){myCloseDelay=session.closeDelayTimeout=clearTimeout(myCloseDelay);session.delayInProgress=false}cancelTimer();session.tipOpenImminent=false;if(element.data(DATA_HASACTIVEHOVER)){element.data(DATA_FORCEDOPEN,false);if(!disableDelay){session.delayInProgress=true;session.closeDelayTimeout=setTimeout(function closeDelay(){session.closeDelayTimeout=null;tipController.hideTip(element);session.delayInProgress=false;myCloseDelay=null},options.closeDelay);myCloseDelay=session.closeDelayTimeout}else{tipController.hideTip(element)}}}function checkForIntent(){var xDifference=Math.abs(session.previousX-session.currentX),yDifference=Math.abs(session.previousY-session.currentY),totalDifference=xDifference+yDifference;if(totalDifference<options.intentSensitivity){cancelClose();closeAnyDelayed();tipController.showTip(element)}else{session.previousX=session.currentX;session.previousY=session.currentY;
+openTooltip()}}function cancelTimer(stopClose){hoverTimer=clearTimeout(hoverTimer);if(session.closeDelayTimeout&&myCloseDelay===session.closeDelayTimeout||stopClose){cancelClose()}}function cancelClose(){session.closeDelayTimeout=clearTimeout(session.closeDelayTimeout);session.delayInProgress=false}function closeAnyDelayed(){if(session.delayInProgress&&session.activeHover&&!session.activeHover.is(element)){session.activeHover.data(DATA_DISPLAYCONTROLLER).hide(true)}}function repositionTooltip(){tipController.resetPosition(element)}this.show=openTooltip;this.hide=closeTooltip;this.cancel=cancelTimer;this.resetPosition=repositionTooltip}function PlacementCalculator(){function computePlacementCoords(element,placement,tipWidth,tipHeight,offset){var placementBase=placement.split("-")[0],coords=new CSSCoordinates,position;if(isSvgElement(element)){position=getSvgPlacement(element,placementBase)}else{position=getHtmlPlacement(element,placementBase)}switch(placement){case"n":coords.set("left",position.left-tipWidth/2
+);coords.set("bottom",session.windowHeight-position.top+offset);break;case"e":coords.set("left",position.left+offset);coords.set("top",position.top-tipHeight/2);break;case"s":coords.set("left",position.left-tipWidth/2);coords.set("top",position.top+offset);break;case"w":coords.set("top",position.top-tipHeight/2);coords.set("right",session.windowWidth-position.left+offset);break;case"nw":coords.set("bottom",session.windowHeight-position.top+offset);coords.set("right",session.windowWidth-position.left-20);break;case"nw-alt":coords.set("left",position.left);coords.set("bottom",session.windowHeight-position.top+offset);break;case"ne":coords.set("left",position.left-20);coords.set("bottom",session.windowHeight-position.top+offset);break;case"ne-alt":coords.set("bottom",session.windowHeight-position.top+offset);coords.set("right",session.windowWidth-position.left);break;case"sw":coords.set("top",position.top+offset);coords.set("right",session.windowWidth-position.left-20);break;case"sw-alt":coords.set("left",
+position.left);coords.set("top",position.top+offset);break;case"se":coords.set("left",position.left-20);coords.set("top",position.top+offset);break;case"se-alt":coords.set("top",position.top+offset);coords.set("right",session.windowWidth-position.left);break}return coords}function getHtmlPlacement(element,placement){var objectOffset=element.offset(),objectWidth=element.outerWidth(),objectHeight=element.outerHeight(),left,top;switch(placement){case"n":left=objectOffset.left+objectWidth/2;top=objectOffset.top;break;case"e":left=objectOffset.left+objectWidth;top=objectOffset.top+objectHeight/2;break;case"s":left=objectOffset.left+objectWidth/2;top=objectOffset.top+objectHeight;break;case"w":left=objectOffset.left;top=objectOffset.top+objectHeight/2;break;case"nw":left=objectOffset.left;top=objectOffset.top;break;case"ne":left=objectOffset.left+objectWidth;top=objectOffset.top;break;case"sw":left=objectOffset.left;top=objectOffset.top+objectHeight;break;case"se":left=objectOffset.left+objectWidth;
+top=objectOffset.top+objectHeight;break}return{top:top,left:left}}function getSvgPlacement(element,placement){var svgElement=element.closest("svg")[0],domElement=element[0],point=svgElement.createSVGPoint(),boundingBox=domElement.getBBox(),matrix=domElement.getScreenCTM(),halfWidth=boundingBox.width/2,halfHeight=boundingBox.height/2,placements=[],placementKeys=["nw","n","ne","e","se","s","sw","w"],coords,rotation,steps,x;function pushPlacement(){placements.push(point.matrixTransform(matrix))}point.x=boundingBox.x;point.y=boundingBox.y;pushPlacement();point.x+=halfWidth;pushPlacement();point.x+=halfWidth;pushPlacement();point.y+=halfHeight;pushPlacement();point.y+=halfHeight;pushPlacement();point.x-=halfWidth;pushPlacement();point.x-=halfWidth;pushPlacement();point.y-=halfHeight;pushPlacement();if(placements[0].y!==placements[1].y||placements[0].x!==placements[7].x){rotation=Math.atan2(matrix.b,matrix.a)*RAD2DEG;steps=Math.ceil((rotation%360-22.5)/45);if(steps<1){steps+=8}while(steps--){placementKeys.push(
+placementKeys.shift())}}for(x=0;x<placements.length;x++){if(placementKeys[x]===placement){coords=placements[x];break}}return{top:coords.y+session.scrollTop,left:coords.x+session.scrollLeft}}this.compute=computePlacementCoords}function TooltipController(options){var placementCalculator=new PlacementCalculator,tipElement=$("#"+options.popupId);if(tipElement.length===0){tipElement=$("<div/>",{id:options.popupId});if($body.length===0){$body=$("body")}$body.append(tipElement);session.tooltips=session.tooltips?session.tooltips.add(tipElement):tipElement}if(options.followMouse){if(!tipElement.data(DATA_HASMOUSEMOVE)){$document.on("mousemove"+EVENT_NAMESPACE,positionTipOnCursor);$window.on("scroll"+EVENT_NAMESPACE,positionTipOnCursor);tipElement.data(DATA_HASMOUSEMOVE,true)}}function beginShowTip(element){element.data(DATA_HASACTIVEHOVER,true);tipElement.queue(function queueTipInit(next){showTip(element);next()})}function showTip(element){var tipContent;if(!element.data(DATA_HASACTIVEHOVER)){return}if(
+session.isTipOpen){if(!session.isClosing){hideTip(session.activeHover)}tipElement.delay(100).queue(function queueTipAgain(next){showTip(element);next()});return}element.trigger("powerTipPreRender");tipContent=getTooltipContent(element);if(tipContent){tipElement.empty().append(tipContent)}else{return}element.trigger("powerTipRender");session.activeHover=element;session.isTipOpen=true;tipElement.data(DATA_MOUSEONTOTIP,options.mouseOnToPopup);tipElement.addClass(options.popupClass);if(!options.followMouse||element.data(DATA_FORCEDOPEN)){positionTipOnElement(element);session.isFixedTipOpen=true}else{positionTipOnCursor()}if(!element.data(DATA_FORCEDOPEN)&&!options.followMouse){$document.on("click"+EVENT_NAMESPACE,function documentClick(event){var target=event.target;if(target!==element[0]){if(options.mouseOnToPopup){if(target!==tipElement[0]&&!$.contains(tipElement[0],target)){$.powerTip.hide()}}else{$.powerTip.hide()}}})}if(options.mouseOnToPopup&&!options.manual){tipElement.on("mouseenter"+EVENT_NAMESPACE,
+function tipMouseEnter(){if(session.activeHover){session.activeHover.data(DATA_DISPLAYCONTROLLER).cancel()}});tipElement.on("mouseleave"+EVENT_NAMESPACE,function tipMouseLeave(){if(session.activeHover){session.activeHover.data(DATA_DISPLAYCONTROLLER).hide()}})}tipElement.fadeIn(options.fadeInTime,function fadeInCallback(){if(!session.desyncTimeout){session.desyncTimeout=setInterval(closeDesyncedTip,500)}element.trigger("powerTipOpen")})}function hideTip(element){session.isClosing=true;session.isTipOpen=false;session.desyncTimeout=clearInterval(session.desyncTimeout);element.data(DATA_HASACTIVEHOVER,false);element.data(DATA_FORCEDOPEN,false);$document.off("click"+EVENT_NAMESPACE);tipElement.off(EVENT_NAMESPACE);tipElement.fadeOut(options.fadeOutTime,function fadeOutCallback(){var coords=new CSSCoordinates;session.activeHover=null;session.isClosing=false;session.isFixedTipOpen=false;tipElement.removeClass();coords.set("top",session.currentY+options.offset);coords.set("left",session.currentX+options.offset);
+tipElement.css(coords);element.trigger("powerTipClose")})}function positionTipOnCursor(){var tipWidth,tipHeight,coords,collisions,collisionCount;if(!session.isFixedTipOpen&&(session.isTipOpen||session.tipOpenImminent&&tipElement.data(DATA_HASMOUSEMOVE))){tipWidth=tipElement.outerWidth();tipHeight=tipElement.outerHeight();coords=new CSSCoordinates;coords.set("top",session.currentY+options.offset);coords.set("left",session.currentX+options.offset);collisions=getViewportCollisions(coords,tipWidth,tipHeight);if(collisions!==Collision.none){collisionCount=countFlags(collisions);if(collisionCount===1){if(collisions===Collision.right){coords.set("left",session.scrollLeft+session.windowWidth-tipWidth)}else if(collisions===Collision.bottom){coords.set("top",session.scrollTop+session.windowHeight-tipHeight)}}else{coords.set("left",session.currentX-tipWidth-options.offset);coords.set("top",session.currentY-tipHeight-options.offset)}}tipElement.css(coords)}}function positionTipOnElement(element){var priorityList,
+finalPlacement;if(options.smartPlacement||options.followMouse&&element.data(DATA_FORCEDOPEN)){priorityList=$.fn.powerTip.smartPlacementLists[options.placement];$.each(priorityList,function(idx,pos){var collisions=getViewportCollisions(placeTooltip(element,pos),tipElement.outerWidth(),tipElement.outerHeight());finalPlacement=pos;return collisions!==Collision.none})}else{placeTooltip(element,options.placement);finalPlacement=options.placement}tipElement.removeClass("w nw sw e ne se n s w se-alt sw-alt ne-alt nw-alt");tipElement.addClass(finalPlacement)}function placeTooltip(element,placement){var iterationCount=0,tipWidth,tipHeight,coords=new CSSCoordinates;coords.set("top",0);coords.set("left",0);tipElement.css(coords);do{tipWidth=tipElement.outerWidth();tipHeight=tipElement.outerHeight();coords=placementCalculator.compute(element,placement,tipWidth,tipHeight,options.offset);tipElement.css(coords)}while(++iterationCount<=5&&(tipWidth!==tipElement.outerWidth()||tipHeight!==tipElement.outerHeight()));
+return coords}function closeDesyncedTip(){var isDesynced=false,hasDesyncableCloseEvent=$.grep(["mouseleave","mouseout","blur","focusout"],function(eventType){return $.inArray(eventType,options.closeEvents)!==-1}).length>0;if(session.isTipOpen&&!session.isClosing&&!session.delayInProgress&&hasDesyncableCloseEvent){if(session.activeHover.data(DATA_HASACTIVEHOVER)===false||session.activeHover.is(":disabled")){isDesynced=true}else if(!isMouseOver(session.activeHover)&&!session.activeHover.is(":focus")&&!session.activeHover.data(DATA_FORCEDOPEN)){if(tipElement.data(DATA_MOUSEONTOTIP)){if(!isMouseOver(tipElement)){isDesynced=true}}else{isDesynced=true}}if(isDesynced){hideTip(session.activeHover)}}}this.showTip=beginShowTip;this.hideTip=hideTip;this.resetPosition=positionTipOnElement}function isSvgElement(element){return Boolean(window.SVGElement&&element[0]instanceof SVGElement)}function isMouseEvent(event){return Boolean(event&&$.inArray(event.type,MOUSE_EVENTS)>-1&&typeof event.pageX==="number")}
+function initTracking(){if(!session.mouseTrackingActive){session.mouseTrackingActive=true;getViewportDimensions();$(getViewportDimensions);$document.on("mousemove"+EVENT_NAMESPACE,trackMouse);$window.on("resize"+EVENT_NAMESPACE,trackResize);$window.on("scroll"+EVENT_NAMESPACE,trackScroll)}}function getViewportDimensions(){session.scrollLeft=$window.scrollLeft();session.scrollTop=$window.scrollTop();session.windowWidth=$window.width();session.windowHeight=$window.height()}function trackResize(){session.windowWidth=$window.width();session.windowHeight=$window.height()}function trackScroll(){var x=$window.scrollLeft(),y=$window.scrollTop();if(x!==session.scrollLeft){session.currentX+=x-session.scrollLeft;session.scrollLeft=x}if(y!==session.scrollTop){session.currentY+=y-session.scrollTop;session.scrollTop=y}}function trackMouse(event){session.currentX=event.pageX;session.currentY=event.pageY}function isMouseOver(element){var elementPosition=element.offset(),elementBox=element[0].getBoundingClientRect(),
+elementWidth=elementBox.right-elementBox.left,elementHeight=elementBox.bottom-elementBox.top;return session.currentX>=elementPosition.left&&session.currentX<=elementPosition.left+elementWidth&&session.currentY>=elementPosition.top&&session.currentY<=elementPosition.top+elementHeight}function getTooltipContent(element){var tipText=element.data(DATA_POWERTIP),tipObject=element.data(DATA_POWERTIPJQ),tipTarget=element.data(DATA_POWERTIPTARGET),targetElement,content;if(tipText){if($.isFunction(tipText)){tipText=tipText.call(element[0])}content=tipText}else if(tipObject){if($.isFunction(tipObject)){tipObject=tipObject.call(element[0])}if(tipObject.length>0){content=tipObject.clone(true,true)}}else if(tipTarget){targetElement=$("#"+tipTarget);if(targetElement.length>0){content=targetElement.html()}}return content}function getViewportCollisions(coords,elementWidth,elementHeight){var viewportTop=session.scrollTop,viewportLeft=session.scrollLeft,viewportBottom=viewportTop+session.windowHeight,
+viewportRight=viewportLeft+session.windowWidth,collisions=Collision.none;if(coords.top<viewportTop||Math.abs(coords.bottom-session.windowHeight)-elementHeight<viewportTop){collisions|=Collision.top}if(coords.top+elementHeight>viewportBottom||Math.abs(coords.bottom-session.windowHeight)>viewportBottom){collisions|=Collision.bottom}if(coords.left<viewportLeft||coords.right+elementWidth>viewportRight){collisions|=Collision.left}if(coords.left+elementWidth>viewportRight||coords.right<viewportLeft){collisions|=Collision.right}return collisions}function countFlags(value){var count=0;while(value){value&=value-1;count++}return count}return $.powerTip});
+/*!
  * jQuery UI Touch Punch 0.2.3
  *
  * Copyright 2011–2014, Dave Furfero
@@ -28,7 +173,32 @@
  * Depends:
  *  jquery.ui.widget.js
  *  jquery.ui.mouse.js
- */
-!function(a){function f(a,b){if(!(a.originalEvent.touches.length>1)){a.preventDefault();var c=a.originalEvent.changedTouches[0],d=document.createEvent("MouseEvents");d.initMouseEvent(b,!0,!0,window,1,c.screenX,c.screenY,c.clientX,c.clientY,!1,!1,!1,!1,0,null),a.target.dispatchEvent(d)}}if(a.support.touch="ontouchend"in document,a.support.touch){var e,b=a.ui.mouse.prototype,c=b._mouseInit,d=b._mouseDestroy;b._touchStart=function(a){var b=this;!e&&b._mouseCapture(a.originalEvent.changedTouches[0])&&(e=!0,b._touchMoved=!1,f(a,"mouseover"),f(a,"mousemove"),f(a,"mousedown"))},b._touchMove=function(a){e&&(this._touchMoved=!0,f(a,"mousemove"))},b._touchEnd=function(a){e&&(f(a,"mouseup"),f(a,"mouseout"),this._touchMoved||f(a,"click"),e=!1)},b._mouseInit=function(){var b=this;b.element.bind({touchstart:a.proxy(b,"_touchStart"),touchmove:a.proxy(b,"_touchMove"),touchend:a.proxy(b,"_touchEnd")}),c.call(b)},b._mouseDestroy=function(){var b=this;b.element.unbind({touchstart:a.proxy(b,"_touchStart"),touchmove:a.proxy(b,"_touchMove"),touchend:a.proxy(b,"_touchEnd")}),d.call(b)}}}(jQuery);/*! SmartMenus jQuery Plugin - v1.1.0 - September 17, 2017
+ */!function(a){function f(a,b){if(!(a.originalEvent.touches.length>1)){a.preventDefault();var c=a.originalEvent.changedTouches[0],d=document.createEvent("MouseEvents");d.initMouseEvent(b,!0,!0,window,1,c.screenX,c.screenY,c.clientX,c.clientY,!1,!1,!1,!1,0,null),a.target.dispatchEvent(d)}}if(a.support.touch="ontouchend"in document,a.support.touch){var e,b=a.ui.mouse.prototype,c=b._mouseInit,d=b._mouseDestroy;b._touchStart=function(a){var b=this;!e&&b._mouseCapture(a.originalEvent.changedTouches[0])&&(e=!0,b._touchMoved=!1,f(a,"mouseover"),f(a,"mousemove"),f(a,"mousedown"))},b._touchMove=function(a){e&&(this._touchMoved=!0,f(a,"mousemove"))},b._touchEnd=function(a){e&&(f(a,"mouseup"),f(a,"mouseout"),this._touchMoved||f(a,"click"),e=!1)},b._mouseInit=function(){var b=this;b.element.bind({touchstart:a.proxy(b,"_touchStart"),touchmove:a.proxy(b,"_touchMove"),touchend:a.proxy(b,"_touchEnd")}),c.call(b)},b._mouseDestroy=function(){var b=this;b.element.unbind({touchstart:a.proxy(b,"_touchStart"),touchmove:a.proxy(b,
+"_touchMove"),touchend:a.proxy(b,"_touchEnd")}),d.call(b)}}}(jQuery);
+/*! SmartMenus jQuery Plugin - v1.1.0 - September 17, 2017
  * http://www.smartmenus.org/
- * Copyright Vasil Dinkov, Vadikom Web Ltd. http://vadikom.com; Licensed MIT */(function(t){"function"==typeof define&&define.amd?define(["jquery"],t):"object"==typeof module&&"object"==typeof module.exports?module.exports=t(require("jquery")):t(jQuery)})(function($){function initMouseDetection(t){var e=".smartmenus_mouse";if(mouseDetectionEnabled||t)mouseDetectionEnabled&&t&&($(document).off(e),mouseDetectionEnabled=!1);else{var i=!0,s=null,o={mousemove:function(t){var e={x:t.pageX,y:t.pageY,timeStamp:(new Date).getTime()};if(s){var o=Math.abs(s.x-e.x),a=Math.abs(s.y-e.y);if((o>0||a>0)&&2>=o&&2>=a&&300>=e.timeStamp-s.timeStamp&&(mouse=!0,i)){var n=$(t.target).closest("a");n.is("a")&&$.each(menuTrees,function(){return $.contains(this.$root[0],n[0])?(this.itemEnter({currentTarget:n[0]}),!1):void 0}),i=!1}}s=e}};o[touchEvents?"touchstart":"pointerover pointermove pointerout MSPointerOver MSPointerMove 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i=".smartmenus";this.$root.data("smartmenus",this).attr("data-smartmenus-id",this.rootId).dataSM("level",1).on(getEventsNS({"mouseover focusin":$.proxy(this.rootOver,this),"mouseout focusout":$.proxy(this.rootOut,this),keydown:$.proxy(this.rootKeyDown,this)},i)).on(getEventsNS({mouseenter:$.proxy(this.itemEnter,this),mouseleave:$.proxy(this.itemLeave,this),mousedown:$.proxy(this.itemDown,this),focus:$.proxy(this.itemFocus,this),blur:$.proxy(this.itemBlur,this),click:$.proxy(this.itemClick,this)},i),"a"),i+=this.rootId,this.opts.hideOnClick&&$(document).on(getEventsNS({touchstart:$.proxy(this.docTouchStart,this),touchmove:$.proxy(this.docTouchMove,this),touchend:$.proxy(this.docTouchEnd,this),click:$.proxy(this.docClick,this)},i)),$(window).on(getEventsNS({"resize 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e=".smartmenus";this.$root.removeData("smartmenus").removeAttr("data-smartmenus-id").removeDataSM("level").off(e),e+=this.rootId,$(document).off(e),$(window).off(e),this.opts.subIndicators&&(this.$subArrow=null)}this.menuHideAll();var i=this;this.$root.find("ul").each(function(){var t=$(this);t.dataSM("scroll-arrows")&&t.dataSM("scroll-arrows").remove(),t.dataSM("shown-before")&&((i.opts.subMenusMinWidth||i.opts.subMenusMaxWidth)&&t.css({width:"",minWidth:"",maxWidth:""}).removeClass("sm-nowrap"),t.dataSM("scroll-arrows")&&t.dataSM("scroll-arrows").remove(),t.css({zIndex:"",top:"",left:"",marginLeft:"",marginTop:"",display:""})),0==(t.attr("id")||"").indexOf(i.accessIdPrefix)&&t.removeAttr("id")}).removeDataSM("in-mega").removeDataSM("shown-before").removeDataSM("scroll-arrows").removeDataSM("parent-a").removeDataSM("level").removeDataSM("beforefirstshowfired").removeAttr("role").removeAttr("aria-hidden").removeAttr("aria-labelledby").removeAttr("aria-expanded"),this.$root.find("a.has-submenu").each(function(){var t=$(this);0==t.attr("id").indexOf(i.accessIdPrefix)&&t.removeAttr("id")}).removeClass("has-submenu").removeDataSM("sub").removeAttr("aria-haspopup").removeAttr("aria-controls").removeAttr("aria-expanded").closest("li").removeDataSM("sub"),this.opts.subIndicators&&this.$root.find("span.sub-arrow").remove(),this.opts.markCurrentItem&&this.$root.find("a.current").removeClass("current"),t||(this.$root=null,this.$firstLink=null,this.$firstSub=null,this.$disableOverlay&&(this.$disableOverlay.remove(),this.$disableOverlay=null),menuTrees.splice($.inArray(this,menuTrees),1))},disable:function(t){if(!this.disabled){if(this.menuHideAll(),!t&&!this.opts.isPopup&&this.$root.is(":visible")){var e=this.$root.offset();this.$disableOverlay=$('<div class="sm-jquery-disable-overlay"/>').css({position:"absolute",top:e.top,left:e.left,width:this.$root.outerWidth(),height:this.$root.outerHeight(),zIndex:this.getStartZIndex(!0),opacity:0}).appendTo(document.body)}this.disabled=!0}},docClick:function(t){return this.$touchScrollingSub?(this.$touchScrollingSub=null,void 0):((this.visibleSubMenus.length&&!$.contains(this.$root[0],t.target)||$(t.target).closest("a").length)&&this.menuHideAll(),void 0)},docTouchEnd:function(){if(this.lastTouch){if(!(!this.visibleSubMenus.length||void 0!==this.lastTouch.x2&&this.lastTouch.x1!=this.lastTouch.x2||void 0!==this.lastTouch.y2&&this.lastTouch.y1!=this.lastTouch.y2||this.lastTouch.target&&$.contains(this.$root[0],this.lastTouch.target))){this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0);var t=this;this.hideTimeout=setTimeout(function(){t.menuHideAll()},350)}this.lastTouch=null}},docTouchMove:function(t){if(this.lastTouch){var e=t.originalEvent.touches[0];this.lastTouch.x2=e.pageX,this.lastTouch.y2=e.pageY}},docTouchStart:function(t){var e=t.originalEvent.touches[0];this.lastTouch={x1:e.pageX,y1:e.pageY,target:e.target}},enable:function(){this.disabled&&(this.$disableOverlay&&(this.$disableOverlay.remove(),this.$disableOverlay=null),this.disabled=!1)},getClosestMenu:function(t){for(var e=$(t).closest("ul");e.dataSM("in-mega");)e=e.parent().closest("ul");return e[0]||null},getHeight:function(t){return this.getOffset(t,!0)},getOffset:function(t,e){var i;"none"==t.css("display")&&(i={position:t[0].style.position,visibility:t[0].style.visibility},t.css({position:"absolute",visibility:"hidden"}).show());var s=t[0].getBoundingClientRect&&t[0].getBoundingClientRect(),o=s&&(e?s.height||s.bottom-s.top:s.width||s.right-s.left);return o||0===o||(o=e?t[0].offsetHeight:t[0].offsetWidth),i&&t.hide().css(i),o},getStartZIndex:function(t){var e=parseInt(this[t?"$root":"$firstSub"].css("z-index"));return!t&&isNaN(e)&&(e=parseInt(this.$root.css("z-index"))),isNaN(e)?1:e},getTouchPoint:function(t){return t.touches&&t.touches[0]||t.changedTouches&&t.changedTouches[0]||t},getViewport:function(t){var e=t?"Height":"Width",i=document.documentElement["client"+e],s=window["inner"+e];return s&&(i=Math.min(i,s)),i},getViewportHeight:function(){return this.getViewport(!0)},getViewportWidth:function(){return this.getViewport()},getWidth:function(t){return this.getOffset(t)},handleEvents:function(){return!this.disabled&&this.isCSSOn()},handleItemEvents:function(t){return this.handleEvents()&&!this.isLinkInMegaMenu(t)},isCollapsible:function(){return"static"==this.$firstSub.css("position")},isCSSOn:function(){return"inline"!=this.$firstLink.css("display")},isFixed:function(){var t="fixed"==this.$root.css("position");return t||this.$root.parentsUntil("body").each(function(){return"fixed"==$(this).css("position")?(t=!0,!1):void 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e=$(t.currentTarget);if(this.handleItemEvents(e)){if(this.$touchScrollingSub&&this.$touchScrollingSub[0]==e.closest("ul")[0])return this.$touchScrollingSub=null,t.stopPropagation(),!1;if(this.$root.triggerHandler("click.smapi",e[0])===!1)return!1;var i=$(t.target).is(".sub-arrow"),s=e.dataSM("sub"),o=s?2==s.dataSM("level"):!1,a=this.isCollapsible(),n=/toggle$/.test(this.opts.collapsibleBehavior),r=/link$/.test(this.opts.collapsibleBehavior),h=/^accordion/.test(this.opts.collapsibleBehavior);if(s&&!s.is(":visible")){if((!r||!a||i)&&(this.opts.showOnClick&&o&&(this.clickActivated=!0),this.itemActivate(e,h),s.is(":visible")))return this.focusActivated=!0,!1}else if(a&&(n||i))return this.itemActivate(e,h),this.menuHide(s),n&&(this.focusActivated=!1),!1;return this.opts.showOnClick&&o||e.hasClass("disabled")||this.$root.triggerHandler("select.smapi",e[0])===!1?!1:void 0}},itemDown:function(t){var e=$(t.currentTarget);this.handleItemEvents(e)&&e.dataSM("mousedown",!0)},itemEnter:function(t){var e=$(t.currentTarget);if(this.handleItemEvents(e)){if(!this.isTouchMode()){this.showTimeout&&(clearTimeout(this.showTimeout),this.showTimeout=0);var i=this;this.showTimeout=setTimeout(function(){i.itemActivate(e)},this.opts.showOnClick&&1==e.closest("ul").dataSM("level")?1:this.opts.showTimeout)}this.$root.triggerHandler("mouseenter.smapi",e[0])}},itemFocus:function(t){var e=$(t.currentTarget);this.handleItemEvents(e)&&(!this.focusActivated||this.isTouchMode()&&e.dataSM("mousedown")||this.activatedItems.length&&this.activatedItems[this.activatedItems.length-1][0]==e[0]||this.itemActivate(e,!0),this.$root.triggerHandler("focus.smapi",e[0]))},itemLeave:function(t){var e=$(t.currentTarget);this.handleItemEvents(e)&&(this.isTouchMode()||(e[0].blur(),this.showTimeout&&(clearTimeout(this.showTimeout),this.showTimeout=0)),e.removeDataSM("mousedown"),this.$root.triggerHandler("mouseleave.smapi",e[0]))},menuHide:function(t){if(this.$root.triggerHandler("beforehide.smapi",t[0])!==!1&&(canAnimate&&t.stop(!0,!0),"none"!=t.css("display"))){var e=function(){t.css("z-index","")};this.isCollapsible()?canAnimate&&this.opts.collapsibleHideFunction?this.opts.collapsibleHideFunction.call(this,t,e):t.hide(this.opts.collapsibleHideDuration,e):canAnimate&&this.opts.hideFunction?this.opts.hideFunction.call(this,t,e):t.hide(this.opts.hideDuration,e),t.dataSM("scroll")&&(this.menuScrollStop(t),t.css({"touch-action":"","-ms-touch-action":"","-webkit-transform":"",transform:""}).off(".smartmenus_scroll").removeDataSM("scroll").dataSM("scroll-arrows").hide()),t.dataSM("parent-a").removeClass("highlighted").attr("aria-expanded","false"),t.attr({"aria-expanded":"false","aria-hidden":"true"});var i=t.dataSM("level");this.activatedItems.splice(i-1,1),this.visibleSubMenus.splice($.inArray(t,this.visibleSubMenus),1),this.$root.triggerHandler("hide.smapi",t[0])}},menuHideAll:function(){this.showTimeout&&(clearTimeout(this.showTimeout),this.showTimeout=0);for(var 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e,i,s=t.dataSM("parent-a"),o=s.closest("li"),a=o.parent(),n=t.dataSM("level"),r=this.getWidth(t),h=this.getHeight(t),u=s.offset(),l=u.left,c=u.top,d=this.getWidth(s),m=this.getHeight(s),p=$(window),f=p.scrollLeft(),v=p.scrollTop(),b=this.getViewportWidth(),S=this.getViewportHeight(),g=a.parent().is("[data-sm-horizontal-sub]")||2==n&&!a.hasClass("sm-vertical"),M=this.opts.rightToLeftSubMenus&&!o.is("[data-sm-reverse]")||!this.opts.rightToLeftSubMenus&&o.is("[data-sm-reverse]"),w=2==n?this.opts.mainMenuSubOffsetX:this.opts.subMenusSubOffsetX,T=2==n?this.opts.mainMenuSubOffsetY:this.opts.subMenusSubOffsetY;if(g?(e=M?d-r-w:w,i=this.opts.bottomToTopSubMenus?-h-T:m+T):(e=M?w-r:d-w,i=this.opts.bottomToTopSubMenus?m-T-h:T),this.opts.keepInViewport){var y=l+e,I=c+i;if(M&&f>y?e=g?f-y+e:d-w:!M&&y+r>f+b&&(e=g?f+b-r-y+e:w-r),g||(S>h&&I+h>v+S?i+=v+S-h-I:(h>=S||v>I)&&(i+=v-I)),g&&(I+h>v+S+.49||v>I)||!g&&h>S+.49){var x=this;t.dataSM("scroll-arrows")||t.dataSM("scroll-arrows",$([$('<span 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r=t.dataSM("level");if(this.activatedItems[r-1]&&this.activatedItems[r-1].dataSM("sub")&&this.activatedItems[r-1].dataSM("sub").is(":visible")&&this.menuHideSubMenus(r-1),o.y=o.up&&o.y>=n||!o.up&&n>=o.y?o.y:Math.abs(n-o.y)>s?o.y+(o.up?s:-s):n,t.css(this.cssTransforms3d?{"-webkit-transform":"translate3d(0, "+o.y+"px, 0)",transform:"translate3d(0, "+o.y+"px, 0)"}:{marginTop:o.y}),mouse&&(o.up&&o.y>o.downEnd||!o.up&&o.y<o.upEnd)&&a.eq(o.up?1:0).show(),o.y==n)mouse&&a.eq(o.up?0:1).hide(),this.menuScrollStop(t);else if(!e){this.opts.scrollAccelerate&&o.step<this.opts.scrollStep&&(o.step+=.2);var h=this;this.scrollTimeout=requestAnimationFrame(function(){h.menuScroll(t)})}},menuScrollMousewheel:function(t,e){if(this.getClosestMenu(e.target)==t[0]){e=e.originalEvent;var i=(e.wheelDelta||-e.detail)>0;t.dataSM("scroll-arrows").eq(i?0:1).is(":visible")&&(t.dataSM("scroll").up=i,this.menuScroll(t,!0))}e.preventDefault()},menuScrollOut:function(t,e){mouse&&(/^scroll-(up|down)/.test((e.relatedTarget||"").className)||(t[0]==e.relatedTarget||$.contains(t[0],e.relatedTarget))&&this.getClosestMenu(e.relatedTarget)==t[0]||t.dataSM("scroll-arrows").css("visibility","hidden"))},menuScrollOver:function(t,e){if(mouse&&!/^scroll-(up|down)/.test(e.target.className)&&this.getClosestMenu(e.target)==t[0]){this.menuScrollRefreshData(t);var i=t.dataSM("scroll"),s=$(window).scrollTop()-t.dataSM("parent-a").offset().top-i.itemH;t.dataSM("scroll-arrows").eq(0).css("margin-top",s).end().eq(1).css("margin-top",s+this.getViewportHeight()-i.arrowDownH).end().css("visibility","visible")}},menuScrollRefreshData:function(t){var e=t.dataSM("scroll"),i=$(window).scrollTop()-t.dataSM("parent-a").offset().top-e.itemH;this.cssTransforms3d&&(i=-(parseFloat(t.css("margin-top"))-i)),$.extend(e,{upEnd:i,downEnd:i+this.getViewportHeight()-e.subH})},menuScrollStop:function(t){return this.scrollTimeout?(cancelAnimationFrame(this.scrollTimeout),this.scrollTimeout=0,t.dataSM("scroll").step=1,!0):void 0},menuScrollTouch:function(t,e){if(e=e.originalEvent,isTouchEvent(e)){var i=this.getTouchPoint(e);if(this.getClosestMenu(i.target)==t[0]){var s=t.dataSM("scroll");if(/(start|down)$/i.test(e.type))this.menuScrollStop(t)?(e.preventDefault(),this.$touchScrollingSub=t):this.$touchScrollingSub=null,this.menuScrollRefreshData(t),$.extend(s,{touchStartY:i.pageY,touchStartTime:e.timeStamp});else if(/move$/i.test(e.type)){var o=void 0!==s.touchY?s.touchY:s.touchStartY;if(void 0!==o&&o!=i.pageY){this.$touchScrollingSub=t;var a=i.pageY>o;void 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e=t.dataSM("parent-a"),i=this.isCollapsible();if((this.opts.keepHighlighted||i)&&e.addClass("highlighted"),i)t.removeClass("sm-nowrap").css({zIndex:"",width:"auto",minWidth:"",maxWidth:"",top:"",left:"",marginLeft:"",marginTop:""});else{if(t.css("z-index",this.zIndexInc=(this.zIndexInc||this.getStartZIndex())+1),(this.opts.subMenusMinWidth||this.opts.subMenusMaxWidth)&&(t.css({width:"auto",minWidth:"",maxWidth:""}).addClass("sm-nowrap"),this.opts.subMenusMinWidth&&t.css("min-width",this.opts.subMenusMinWidth),this.opts.subMenusMaxWidth)){var s=this.getWidth(t);t.css("max-width",this.opts.subMenusMaxWidth),s>this.getWidth(t)&&t.removeClass("sm-nowrap").css("width",this.opts.subMenusMaxWidth)}this.menuPosition(t)}var o=function(){t.css("overflow","")};i?canAnimate&&this.opts.collapsibleShowFunction?this.opts.collapsibleShowFunction.call(this,t,o):t.show(this.opts.collapsibleShowDuration,o):canAnimate&&this.opts.showFunction?this.opts.showFunction.call(this,t,o):t.show(this.opts.showDuration,o),e.attr("aria-expanded","true"),t.attr({"aria-expanded":"true","aria-hidden":"false"}),this.visibleSubMenus.push(t),this.$root.triggerHandler("show.smapi",t[0])}},popupHide:function(t){this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0);var e=this;this.hideTimeout=setTimeout(function(){e.menuHideAll()},t?1:this.opts.hideTimeout)},popupShow:function(t,e){if(!this.opts.isPopup)return alert('SmartMenus jQuery Error:\n\nIf you want to show this menu via the "popupShow" method, set the isPopup:true option.'),void 0;if(this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0),this.$root.dataSM("shown-before",!0),canAnimate&&this.$root.stop(!0,!0),!this.$root.is(":visible")){this.$root.css({left:t,top:e});var i=this,s=function(){i.$root.css("overflow","")};canAnimate&&this.opts.showFunction?this.opts.showFunction.call(this,this.$root,s):this.$root.show(this.opts.showDuration,s),this.visibleSubMenus[0]=this.$root}},refresh:function(){this.destroy(!0),this.init(!0)},rootKeyDown:function(t){if(this.handleEvents())switch(t.keyCode){case 27:var e=this.activatedItems[0];if(e){this.menuHideAll(),e[0].focus();var i=e.dataSM("sub");i&&this.menuHide(i)}break;case 32:var s=$(t.target);if(s.is("a")&&this.handleItemEvents(s)){var i=s.dataSM("sub");i&&!i.is(":visible")&&(this.itemClick({currentTarget:t.target}),t.preventDefault())}}},rootOut:function(t){if(this.handleEvents()&&!this.isTouchMode()&&t.target!=this.$root[0]&&(this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0),!this.opts.showOnClick||!this.opts.hideOnClick)){var e=this;this.hideTimeout=setTimeout(function(){e.menuHideAll()},this.opts.hideTimeout)}},rootOver:function(t){this.handleEvents()&&!this.isTouchMode()&&t.target!=this.$root[0]&&this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0)},winResize:function(t){if(this.handleEvents()){if(!("onorientationchange"in window)||"orientationchange"==t.type){var e=this.isCollapsible();this.wasCollapsible&&e||(this.activatedItems.length&&this.activatedItems[this.activatedItems.length-1][0].blur(),this.menuHideAll()),this.wasCollapsible=e}}else if(this.$disableOverlay){var i=this.$root.offset();this.$disableOverlay.css({top:i.top,left:i.left,width:this.$root.outerWidth(),height:this.$root.outerHeight()})}}}}),$.fn.dataSM=function(t,e){return e?this.data(t+"_smartmenus",e):this.data(t+"_smartmenus")},$.fn.removeDataSM=function(t){return this.removeData(t+"_smartmenus")},$.fn.smartmenus=function(options){if("string"==typeof options){var args=arguments,method=options;return Array.prototype.shift.call(args),this.each(function(){var t=$(this).data("smartmenus");t&&t[method]&&t[method].apply(t,args)})}return this.each(function(){var dataOpts=$(this).data("sm-options")||null;if(dataOpts)try{dataOpts=eval("("+dataOpts+")")}catch(e){dataOpts=null,alert('ERROR\n\nSmartMenus jQuery init:\nInvalid "data-sm-options" attribute value syntax.')}new $.SmartMenus(this,$.extend({},$.fn.smartmenus.defaults,options,dataOpts))})},$.fn.smartmenus.defaults={isPopup:!1,mainMenuSubOffsetX:0,mainMenuSubOffsetY:0,subMenusSubOffsetX:0,subMenusSubOffsetY:0,subMenusMinWidth:"10em",subMenusMaxWidth:"20em",subIndicators:!0,subIndicatorsPos:"append",subIndicatorsText:"",scrollStep:30,scrollAccelerate:!0,showTimeout:250,hideTimeout:500,showDuration:0,showFunction:null,hideDuration:0,hideFunction:function(t,e){t.fadeOut(200,e)},collapsibleShowDuration:0,collapsibleShowFunction:function(t,e){t.slideDown(200,e)},collapsibleHideDuration:0,collapsibleHideFunction:function(t,e){t.slideUp(200,e)},showOnClick:!1,hideOnClick:!0,noMouseOver:!1,keepInViewport:!0,keepHighlighted:!0,markCurrentItem:!1,markCurrentTree:!0,rightToLeftSubMenus:!1,bottomToTopSubMenus:!1,collapsibleBehavior:"default"},$});
\ No newline at end of file
+ * Copyright Vasil Dinkov, Vadikom Web Ltd. http://vadikom.com; Licensed MIT */(function(t){"function"==typeof define&&define.amd?define(["jquery"],t):"object"==typeof module&&"object"==typeof module.exports?module.exports=t(require("jquery")):t(jQuery)})(function($){function initMouseDetection(t){var e=".smartmenus_mouse";if(mouseDetectionEnabled||t)mouseDetectionEnabled&&t&&($(document).off(e),mouseDetectionEnabled=!1);else{var i=!0,s=null,o={mousemove:function(t){var e={x:t.pageX,y:t.pageY,timeStamp:(new Date).getTime()};if(s){var o=Math.abs(s.x-e.x),a=Math.abs(s.y-e.y);if((o>0||a>0)&&2>=o&&2>=a&&300>=e.timeStamp-s.timeStamp&&(mouse=!0,i)){var n=$(t.target).closest("a");n.is("a")&&$.each(menuTrees,function(){return $.contains(this.$root[0],n[0])?(this.itemEnter({currentTarget:n[0]}),!1):void 0}),i=!1}}s=e}};o[touchEvents?"touchstart":"pointerover pointermove pointerout MSPointerOver MSPointerMove MSPointerOut"]=function(t){isTouchEvent(t.originalEvent)&&(mouse=!1)},$(document).on(getEventsNS(o,e)),
+mouseDetectionEnabled=!0}}function isTouchEvent(t){return!/^(4|mouse)$/.test(t.pointerType)}function getEventsNS(t,e){e||(e="");var i={};for(var s in t)i[s.split(" ").join(e+" ")+e]=t[s];return i}var menuTrees=[],mouse=!1,touchEvents="ontouchstart"in window,mouseDetectionEnabled=!1,requestAnimationFrame=window.requestAnimationFrame||function(t){return setTimeout(t,1e3/60)},cancelAnimationFrame=window.cancelAnimationFrame||function(t){clearTimeout(t)},canAnimate=!!$.fn.animate;return $.SmartMenus=function(t,e){this.$root=$(t),this.opts=e,this.rootId="",this.accessIdPrefix="",this.$subArrow=null,this.activatedItems=[],this.visibleSubMenus=[],this.showTimeout=0,this.hideTimeout=0,this.scrollTimeout=0,this.clickActivated=!1,this.focusActivated=!1,this.zIndexInc=0,this.idInc=0,this.$firstLink=null,this.$firstSub=null,this.disabled=!1,this.$disableOverlay=null,this.$touchScrollingSub=null,this.cssTransforms3d="perspective"in t.style||"webkitPerspective"in t.style,this.wasCollapsible=!1,this.init()},$.extend(
+$.SmartMenus,{hideAll:function(){$.each(menuTrees,function(){this.menuHideAll()})},destroy:function(){for(;menuTrees.length;)menuTrees[0].destroy();initMouseDetection(!0)},prototype:{init:function(t){var e=this;if(!t){menuTrees.push(this),this.rootId=((new Date).getTime()+Math.random()+"").replace(/\D/g,""),this.accessIdPrefix="sm-"+this.rootId+"-",this.$root.hasClass("sm-rtl")&&(this.opts.rightToLeftSubMenus=!0);var i=".smartmenus";this.$root.data("smartmenus",this).attr("data-smartmenus-id",this.rootId).dataSM("level",1).on(getEventsNS({"mouseover focusin":$.proxy(this.rootOver,this),"mouseout focusout":$.proxy(this.rootOut,this),keydown:$.proxy(this.rootKeyDown,this)},i)).on(getEventsNS({mouseenter:$.proxy(this.itemEnter,this),mouseleave:$.proxy(this.itemLeave,this),mousedown:$.proxy(this.itemDown,this),focus:$.proxy(this.itemFocus,this),blur:$.proxy(this.itemBlur,this),click:$.proxy(this.itemClick,this)},i),"a"),i+=this.rootId,this.opts.hideOnClick&&$(document).on(getEventsNS({touchstart:$.proxy(
+this.docTouchStart,this),touchmove:$.proxy(this.docTouchMove,this),touchend:$.proxy(this.docTouchEnd,this),click:$.proxy(this.docClick,this)},i)),$(window).on(getEventsNS({"resize orientationchange":$.proxy(this.winResize,this)},i)),this.opts.subIndicators&&(this.$subArrow=$("<span/>").addClass("sub-arrow"),this.opts.subIndicatorsText&&this.$subArrow.html(this.opts.subIndicatorsText)),initMouseDetection()}if(this.$firstSub=this.$root.find("ul").each(function(){e.menuInit($(this))}).eq(0),this.$firstLink=this.$root.find("a").eq(0),this.opts.markCurrentItem){var s=/(index|default)\.[^#\?\/]*/i,o=/#.*/,a=window.location.href.replace(s,""),n=a.replace(o,"");this.$root.find("a").each(function(){var t=this.href.replace(s,""),i=$(this);(t==a||t==n)&&(i.addClass("current"),e.opts.markCurrentTree&&i.parentsUntil("[data-smartmenus-id]","ul").each(function(){$(this).dataSM("parent-a").addClass("current")}))})}this.wasCollapsible=this.isCollapsible()},destroy:function(t){if(!t){var e=".smartmenus";this.$root.removeData(
+"smartmenus").removeAttr("data-smartmenus-id").removeDataSM("level").off(e),e+=this.rootId,$(document).off(e),$(window).off(e),this.opts.subIndicators&&(this.$subArrow=null)}this.menuHideAll();var i=this;this.$root.find("ul").each(function(){var t=$(this);t.dataSM("scroll-arrows")&&t.dataSM("scroll-arrows").remove(),t.dataSM("shown-before")&&((i.opts.subMenusMinWidth||i.opts.subMenusMaxWidth)&&t.css({width:"",minWidth:"",maxWidth:""}).removeClass("sm-nowrap"),t.dataSM("scroll-arrows")&&t.dataSM("scroll-arrows").remove(),t.css({zIndex:"",top:"",left:"",marginLeft:"",marginTop:"",display:""})),0==(t.attr("id")||"").indexOf(i.accessIdPrefix)&&t.removeAttr("id")}).removeDataSM("in-mega").removeDataSM("shown-before").removeDataSM("scroll-arrows").removeDataSM("parent-a").removeDataSM("level").removeDataSM("beforefirstshowfired").removeAttr("role").removeAttr("aria-hidden").removeAttr("aria-labelledby").removeAttr("aria-expanded"),this.$root.find("a.has-submenu").each(function(){var t=$(this);0==t.attr("id"
+).indexOf(i.accessIdPrefix)&&t.removeAttr("id")}).removeClass("has-submenu").removeDataSM("sub").removeAttr("aria-haspopup").removeAttr("aria-controls").removeAttr("aria-expanded").closest("li").removeDataSM("sub"),this.opts.subIndicators&&this.$root.find("span.sub-arrow").remove(),this.opts.markCurrentItem&&this.$root.find("a.current").removeClass("current"),t||(this.$root=null,this.$firstLink=null,this.$firstSub=null,this.$disableOverlay&&(this.$disableOverlay.remove(),this.$disableOverlay=null),menuTrees.splice($.inArray(this,menuTrees),1))},disable:function(t){if(!this.disabled){if(this.menuHideAll(),!t&&!this.opts.isPopup&&this.$root.is(":visible")){var e=this.$root.offset();this.$disableOverlay=$('<div class="sm-jquery-disable-overlay"/>').css({position:"absolute",top:e.top,left:e.left,width:this.$root.outerWidth(),height:this.$root.outerHeight(),zIndex:this.getStartZIndex(!0),opacity:0}).appendTo(document.body)}this.disabled=!0}},docClick:function(t){return this.$touchScrollingSub?(
+this.$touchScrollingSub=null,void 0):((this.visibleSubMenus.length&&!$.contains(this.$root[0],t.target)||$(t.target).closest("a").length)&&this.menuHideAll(),void 0)},docTouchEnd:function(){if(this.lastTouch){if(!(!this.visibleSubMenus.length||void 0!==this.lastTouch.x2&&this.lastTouch.x1!=this.lastTouch.x2||void 0!==this.lastTouch.y2&&this.lastTouch.y1!=this.lastTouch.y2||this.lastTouch.target&&$.contains(this.$root[0],this.lastTouch.target))){this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0);var t=this;this.hideTimeout=setTimeout(function(){t.menuHideAll()},350)}this.lastTouch=null}},docTouchMove:function(t){if(this.lastTouch){var e=t.originalEvent.touches[0];this.lastTouch.x2=e.pageX,this.lastTouch.y2=e.pageY}},docTouchStart:function(t){var e=t.originalEvent.touches[0];this.lastTouch={x1:e.pageX,y1:e.pageY,target:e.target}},enable:function(){this.disabled&&(this.$disableOverlay&&(this.$disableOverlay.remove(),this.$disableOverlay=null),this.disabled=!1)},getClosestMenu:function(t){for(
+var e=$(t).closest("ul");e.dataSM("in-mega");)e=e.parent().closest("ul");return e[0]||null},getHeight:function(t){return this.getOffset(t,!0)},getOffset:function(t,e){var i;"none"==t.css("display")&&(i={position:t[0].style.position,visibility:t[0].style.visibility},t.css({position:"absolute",visibility:"hidden"}).show());var s=t[0].getBoundingClientRect&&t[0].getBoundingClientRect(),o=s&&(e?s.height||s.bottom-s.top:s.width||s.right-s.left);return o||0===o||(o=e?t[0].offsetHeight:t[0].offsetWidth),i&&t.hide().css(i),o},getStartZIndex:function(t){var e=parseInt(this[t?"$root":"$firstSub"].css("z-index"));return!t&&isNaN(e)&&(e=parseInt(this.$root.css("z-index"))),isNaN(e)?1:e},getTouchPoint:function(t){return t.touches&&t.touches[0]||t.changedTouches&&t.changedTouches[0]||t},getViewport:function(t){var e=t?"Height":"Width",i=document.documentElement["client"+e],s=window["inner"+e];return s&&(i=Math.min(i,s)),i},getViewportHeight:function(){return this.getViewport(!0)},getViewportWidth:function(){
+return this.getViewport()},getWidth:function(t){return this.getOffset(t)},handleEvents:function(){return!this.disabled&&this.isCSSOn()},handleItemEvents:function(t){return this.handleEvents()&&!this.isLinkInMegaMenu(t)},isCollapsible:function(){return"static"==this.$firstSub.css("position")},isCSSOn:function(){return"inline"!=this.$firstLink.css("display")},isFixed:function(){var t="fixed"==this.$root.css("position");return t||this.$root.parentsUntil("body").each(function(){return"fixed"==$(this).css("position")?(t=!0,!1):void 0}),t},isLinkInMegaMenu:function(t){return $(this.getClosestMenu(t[0])).hasClass("mega-menu")},isTouchMode:function(){return!mouse||this.opts.noMouseOver||this.isCollapsible()},itemActivate:function(t,e){var i=t.closest("ul"),s=i.dataSM("level");if(s>1&&(!this.activatedItems[s-2]||this.activatedItems[s-2][0]!=i.dataSM("parent-a")[0])){var o=this;$(i.parentsUntil("[data-smartmenus-id]","ul").get().reverse()).add(i).each(function(){o.itemActivate($(this).dataSM("parent-a"))})}if((
+!this.isCollapsible()||e)&&this.menuHideSubMenus(this.activatedItems[s-1]&&this.activatedItems[s-1][0]==t[0]?s:s-1),this.activatedItems[s-1]=t,this.$root.triggerHandler("activate.smapi",t[0])!==!1){var a=t.dataSM("sub");a&&(this.isTouchMode()||!this.opts.showOnClick||this.clickActivated)&&this.menuShow(a)}},itemBlur:function(t){var e=$(t.currentTarget);this.handleItemEvents(e)&&this.$root.triggerHandler("blur.smapi",e[0])},itemClick:function(t){var e=$(t.currentTarget);if(this.handleItemEvents(e)){if(this.$touchScrollingSub&&this.$touchScrollingSub[0]==e.closest("ul")[0])return this.$touchScrollingSub=null,t.stopPropagation(),!1;if(this.$root.triggerHandler("click.smapi",e[0])===!1)return!1;var i=$(t.target).is(".sub-arrow"),s=e.dataSM("sub"),o=s?2==s.dataSM("level"):!1,a=this.isCollapsible(),n=/toggle$/.test(this.opts.collapsibleBehavior),r=/link$/.test(this.opts.collapsibleBehavior),h=/^accordion/.test(this.opts.collapsibleBehavior);if(s&&!s.is(":visible")){if((!r||!a||i)&&(this.opts.showOnClick&&o&&(
+this.clickActivated=!0),this.itemActivate(e,h),s.is(":visible")))return this.focusActivated=!0,!1}else if(a&&(n||i))return this.itemActivate(e,h),this.menuHide(s),n&&(this.focusActivated=!1),!1;return this.opts.showOnClick&&o||e.hasClass("disabled")||this.$root.triggerHandler("select.smapi",e[0])===!1?!1:void 0}},itemDown:function(t){var e=$(t.currentTarget);this.handleItemEvents(e)&&e.dataSM("mousedown",!0)},itemEnter:function(t){var e=$(t.currentTarget);if(this.handleItemEvents(e)){if(!this.isTouchMode()){this.showTimeout&&(clearTimeout(this.showTimeout),this.showTimeout=0);var i=this;this.showTimeout=setTimeout(function(){i.itemActivate(e)},this.opts.showOnClick&&1==e.closest("ul").dataSM("level")?1:this.opts.showTimeout)}this.$root.triggerHandler("mouseenter.smapi",e[0])}},itemFocus:function(t){var e=$(t.currentTarget);this.handleItemEvents(e)&&(!this.focusActivated||this.isTouchMode()&&e.dataSM("mousedown")||this.activatedItems.length&&this.activatedItems[this.activatedItems.length-1][0]==e[0
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index 949116b8..58335fc6 100644
--- a/docs/html/mainpage_8md.html
+++ b/docs/html/mainpage_8md.html
@@ -3,16 +3,18 @@
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 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: docs/static/mainpage.md File Reference</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
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@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
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+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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@@ -66,7 +73,7 @@ $(function() {
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 <script type="text/javascript">
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-$(document).ready(function(){initNavTree('mainpage_8md.html',''); initResizable(); });
+$(function(){initNavTree('mainpage_8md.html',''); initResizable(true); });
 /* @license-end */
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/md_docs_2static_2usage.html b/docs/html/md_docs_2static_2usage.html
index ffc6d5e5..c79424bb 100644
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+++ b/docs/html/md_docs_2static_2usage.html
@@ -3,16 +3,18 @@
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-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: GridFire Python Usage Guide</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
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+<!-- Generated by Doxygen 1.13.2 -->
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 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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@@ -66,7 +73,7 @@ $(function() {
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+$(function(){initNavTree('md_docs_2static_2usage.html',''); initResizable(true); });
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 <div id="doc-content">
@@ -95,14 +102,15 @@ $(document).ready(function(){initNavTree('md_docs_2static_2usage.html',''); init
   <div class="headertitle"><div class="title">GridFire Python Usage Guide</div></div>
 </div><!--header-->
 <div class="contents">
-<div class="textblock"><p><a class="anchor" id="autotoc_md61"></a> This tutorial walks you through installing GridFire’s Python bindings, choosing engines and views thoughtfully, running a simulation, and visualizing your results.</p>
+<div class="textblock"><p><a class="anchor" id="autotoc_md62"></a></p>
+<p>This tutorial walks you through installing GridFire’s Python bindings, choosing engines and views thoughtfully, running a simulation, and visualizing your results.</p>
 <hr  />
- <h1><a class="anchor" id="autotoc_md63"></a>
+ <h1><a class="anchor" id="autotoc_md64"></a>
 1. Installation</h1>
-<h2><a class="anchor" id="autotoc_md64"></a>
+<h2><a class="anchor" id="autotoc_md65"></a>
 1.1 PyPI Release</h2>
 <p>The quickest way to get started is: </p><div class="fragment"><div class="line">pip install gridfire</div>
-</div><!-- fragment --><h2><a class="anchor" id="autotoc_md65"></a>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md66"></a>
 1.2 Development from Source</h2>
 <p>If you want the cutting-edge features or need to hack the C++ backend: </p><div class="fragment"><div class="line">git clone https://github.com/4DSTAR/GridFire.git</div>
 <div class="line">cd GridFire</div>
@@ -114,7 +122,7 @@ $(document).ready(function(){initNavTree('md_docs_2static_2usage.html',''); init
 </div><!-- fragment --><p>You can also build manually with Meson (generally end users will not need to do this): </p><div class="fragment"><div class="line">meson setup build-python</div>
 <div class="line">meson compile -C build_gridfire</div>
 </div><!-- fragment --><hr  />
- <h1><a class="anchor" id="autotoc_md67"></a>
+ <h1><a class="anchor" id="autotoc_md68"></a>
 2. Why These Engines and Views?</h1>
 <p>GridFire’s design balances physical fidelity and performance. Here’s why we pick each component:</p>
 <ol type="1">
@@ -154,7 +162,7 @@ $(document).ready(function(){initNavTree('md_docs_2static_2usage.html',''); init
 </ol>
 <p>By composing these views in sequence, you can tailor accuracy vs performance for your scientific question. Commonly one might use a flow like <b>GraphEngine → Partitioning → Adaptive</b> to capture both full-network physics and manageable stiffness.</p>
 <hr  />
- <h1><a class="anchor" id="autotoc_md69"></a>
+ <h1><a class="anchor" id="autotoc_md70"></a>
 3. Step-by-Step Example</h1>
 <p>Adapted from <a href="../../tests/python/test.py"><code>tests/python/test.py</code></a>. Comments explain each choice.</p>
 <div class="fragment"><div class="line"><span class="keyword">import</span> matplotlib.pyplot <span class="keyword">as</span> plt</div>
@@ -199,8 +207,8 @@ $(document).ready(function(){initNavTree('md_docs_2static_2usage.html',''); init
 <div class="line"> </div>
 <div class="line"><span class="comment"># 8. Final result:</span></div>
 <div class="line">print(f<span class="stringliteral">&quot;Final H-1 fraction: {netOut.composition.getMassFraction(&#39;H-1&#39;)}&quot;</span>)</div>
-<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:38</div></div>
-<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> CVODE_solver_strategy.h:46</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="anamespacegridfire_1_1solver_html"><div class="ttname"><a href="namespacegridfire_1_1solver.html">gridfire::solver</a></div><div class="ttdef"><b>Definition</b> GridSolver.h:7</div></div>
 </div><!-- fragment --><p><b>Why these choices?</b> <br  />
 </p><ul>
 <li><b>buildDepth=2</b>: In Emily’s preliminary tests, depth=2 captures key reaction loops without the overhead of a full network. <br  />
@@ -210,7 +218,7 @@ $(document).ready(function(){initNavTree('md_docs_2static_2usage.html',''); init
 <li><b>Implicit solver</b>: Rosenbrock4 handles stiff systems robustly, letting you push to longer <code>tMax</code>.</li>
 </ul>
 <hr  />
- <h1><a class="anchor" id="autotoc_md71"></a>
+ <h1><a class="anchor" id="autotoc_md72"></a>
 4. Visualizing Reaction Networks</h1>
 <p>GridFire engines and views provide built-in export methods for Graphviz DOT and CSV formats:</p>
 <div class="fragment"><div class="line"><span class="comment"># Export the base network to DOT for Graphviz</span></div>
@@ -237,10 +245,10 @@ $(document).ready(function(){initNavTree('md_docs_2static_2usage.html',''); init
 <div class="line">df.to_csv(<span class="stringliteral">&#39;H1_evolution.csv&#39;</span>, index=<span class="keyword">False</span>)</div>
 </div><!-- fragment --><p> Then plot in pandas or Excel for custom figures.</p>
 <hr  />
- <h1><a class="anchor" id="autotoc_md73"></a>
+ <h1><a class="anchor" id="autotoc_md74"></a>
 5. Beyond the Basics</h1>
 <ul>
-<li><b>Custom Partition Functions</b>: In Python, subclass <code><a class="el" href="classgridfire_1_1partition_1_1PartitionFunction.html" title="Abstract interface for evaluating nuclear partition functions.">gridfire.partition.PartitionFunction</a></code>, override <code>evaluate</code>, <code>supports</code>, and <code>clone</code> to implement new weighting schemes. <br  />
+<li><b>Custom Partition Functions</b>: In Python, subclass <code><a class="el" href="classgridfire_1_1partition_1_1_partition_function.html" title="Abstract interface for evaluating nuclear partition functions.">gridfire.partition.PartitionFunction</a></code>, override <code>evaluate</code>, <code>supports</code>, and <code>clone</code> to implement new weighting schemes. <br  />
 </li>
 <li><b>Parameter Studies</b>: Loop over <code>buildDepth</code>, solver tolerances, or initial compositions to get a sense of the sensitity of the network to input conditions or build a monte carlo grid. <br  />
 </li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/menu.js b/docs/html/menu.js
index b0b26936..0fd1e990 100644
--- a/docs/html/menu.js
+++ b/docs/html/menu.js
@@ -22,15 +22,14 @@
 
  @licend  The above is the entire license notice for the JavaScript code in this file
  */
-function initMenu(relPath,searchEnabled,serverSide,searchPage,search) {
+function initMenu(relPath,searchEnabled,serverSide,searchPage,search,treeview) {
   function makeTree(data,relPath) {
-    var result='';
+    let result='';
     if ('children' in data) {
       result+='<ul>';
-      for (var i in data.children) {
-        var url;
-        var link;
-        link = data.children[i].url;
+      for (let i in data.children) {
+        let url;
+        const link = data.children[i].url;
         if (link.substring(0,1)=='^') {
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         } else {
@@ -44,7 +43,7 @@ function initMenu(relPath,searchEnabled,serverSide,searchPage,search) {
     }
     return result;
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-  var searchBoxHtml;
+  let searchBoxHtml;
   if (searchEnabled) {
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       searchBoxHtml='<div id="MSearchBox" class="MSearchBoxInactive">'+
@@ -88,29 +87,28 @@ function initMenu(relPath,searchEnabled,serverSide,searchPage,search) {
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     $('#main-menu').append('<li id="searchBoxPos2" style="float:right"></li>');
   }
-  var $mainMenuState = $('#main-menu-state');
-  var prevWidth = 0;
+  const $mainMenuState = $('#main-menu-state');
+  let prevWidth = 0;
   if ($mainMenuState.length) {
-    function initResizableIfExists() {
-      if (typeof initResizable==='function') initResizable();
+    const initResizableIfExists = function() {
+      if (typeof initResizable==='function') initResizable(treeview);
     }
     // animate mobile menu
-    $mainMenuState.change(function(e) {
-      var $menu = $('#main-menu');
-      var options = { duration: 250, step: initResizableIfExists };
+    $mainMenuState.change(function() {
+      const $menu = $('#main-menu');
+      let options = { duration: 250, step: initResizableIfExists };
       if (this.checked) {
-        options['complete'] = function() { $menu.css('display', 'block') };
+        options['complete'] = () => $menu.css('display', 'block');
         $menu.hide().slideDown(options);
       } else {
-        options['complete'] = function() { $menu.css('display', 'none') };
+        options['complete'] = () => $menu.css('display', 'none');
         $menu.show().slideUp(options);
       }
     });
     // set default menu visibility
-    function resetState() {
-      var $menu = $('#main-menu');
-      var $mainMenuState = $('#main-menu-state');
-      var newWidth = $(window).outerWidth();
+    const resetState = function() {
+      const $menu = $('#main-menu');
+      const newWidth = $(window).outerWidth();
       if (newWidth!=prevWidth) {
         if ($(window).outerWidth()<768) {
           $mainMenuState.prop('checked',false); $menu.hide();
diff --git a/docs/html/menudata.js b/docs/html/menudata.js
index 5ab57999..221bc050 100644
--- a/docs/html/menudata.js
+++ b/docs/html/menudata.js
@@ -33,7 +33,6 @@ var menudata={children:[
 {text:"a",url:"namespacemembers.html#index_a"},
 {text:"b",url:"namespacemembers.html#index_b"},
 {text:"c",url:"namespacemembers.html#index_c"},
-{text:"d",url:"namespacemembers.html#index_d"},
 {text:"e",url:"namespacemembers.html#index_e"},
 {text:"f",url:"namespacemembers.html#index_f"},
 {text:"g",url:"namespacemembers.html#index_g"},
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 {text:"i",url:"namespacemembers.html#index_i"},
 {text:"j",url:"namespacemembers.html#index_j"},
 {text:"k",url:"namespacemembers.html#index_k"},
+{text:"l",url:"namespacemembers.html#index_l"},
 {text:"m",url:"namespacemembers.html#index_m"},
 {text:"n",url:"namespacemembers.html#index_n"},
 {text:"o",url:"namespacemembers.html#index_o"},
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 {text:"h",url:"namespacemembers_func.html#index_h"},
 {text:"i",url:"namespacemembers_func.html#index_i"},
+{text:"l",url:"namespacemembers_func.html#index_l"},
 {text:"m",url:"namespacemembers_func.html#index_m"},
 {text:"n",url:"namespacemembers_func.html#index_n"},
 {text:"o",url:"namespacemembers_func.html#index_o"},
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 {text:"u",url:"functions_u.html#index_u"},
 {text:"v",url:"functions_v.html#index_v"},
 {text:"w",url:"functions_w.html#index_w"},
+{text:"y",url:"functions_y.html#index_y"},
 {text:"z",url:"functions_z.html#index_z"},
 {text:"~",url:"functions_~.html#index__7E"}]},
 {text:"Functions",url:"functions_func.html",children:[
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 {text:"e",url:"functions_vars_e.html#index_e"},
 {text:"f",url:"functions_vars_f.html#index_f"},
 {text:"g",url:"functions_vars_g.html#index_g"},
+{text:"h",url:"functions_vars_h.html#index_h"},
 {text:"i",url:"functions_vars_i.html#index_i"},
+{text:"j",url:"functions_vars_j.html#index_j"},
 {text:"k",url:"functions_vars_k.html#index_k"},
 {text:"l",url:"functions_vars_l.html#index_l"},
 {text:"m",url:"functions_vars_m.html#index_m"},
 {text:"n",url:"functions_vars_n.html#index_n"},
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 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
 Variables</h2></td></tr>
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 <tr class="separator:a14116c4fbbb07c2fa95826dc543771a2"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a62cc4eb0aa62cc209ee4583b8cc0df52"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
+<h2 class="groupheader">Function Documentation</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a1de3db5e65a2e834c55f458307cab68e">&#9670;&#160;</a></span>gf_author()</h2>
+
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+        <tr>
+          <td class="memname">gridfire.gf_author </td>
+          <td>(</td>
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+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a454366ce631749963d3c6b387bcbc3e7">&#9670;&#160;</a></span>gf_collaboration()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_collaboration </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a787f9de5930793c2976d22426ae971b5" name="a787f9de5930793c2976d22426ae971b5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a787f9de5930793c2976d22426ae971b5">&#9670;&#160;</a></span>gf_credits()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_credits </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="afa60407432a1e563b9731ce298cf42bc" name="afa60407432a1e563b9731ce298cf42bc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afa60407432a1e563b9731ce298cf42bc">&#9670;&#160;</a></span>gf_description()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_description </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ae6f8e40e5233e5c98c9c4290f518b72d" name="ae6f8e40e5233e5c98c9c4290f518b72d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae6f8e40e5233e5c98c9c4290f518b72d">&#9670;&#160;</a></span>gf_email()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_email </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a081c76fc9fbac9b5b380c8e4fa0e7be0" name="a081c76fc9fbac9b5b380c8e4fa0e7be0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a081c76fc9fbac9b5b380c8e4fa0e7be0">&#9670;&#160;</a></span>gf_license()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_license </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a0ee5ace587287cdba8f9755a0ef0b498" name="a0ee5ace587287cdba8f9755a0ef0b498"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0ee5ace587287cdba8f9755a0ef0b498">&#9670;&#160;</a></span>gf_metadata()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_metadata </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ae5ade7b2d801af88a79382441ec68277" name="ae5ade7b2d801af88a79382441ec68277"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae5ade7b2d801af88a79382441ec68277">&#9670;&#160;</a></span>gf_url()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_url </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a45c5e5933ef14301b6f7ec2fff6a0966" name="a45c5e5933ef14301b6f7ec2fff6a0966"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a45c5e5933ef14301b6f7ec2fff6a0966">&#9670;&#160;</a></span>gf_version()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.gf_version </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
 <h2 class="groupheader">Variable Documentation</h2>
 <a id="a2adfc910bd5466746bd71490d2cbdf1d" name="a2adfc910bd5466746bd71490d2cbdf1d"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#a2adfc910bd5466746bd71490d2cbdf1d">&#9670;&#160;</a></span>__all__</h2>
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   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">list gridfire.__all__ = ['type', 'utils', 'engine', 'solver', 'exceptions', 'partition', 'reaction', 'screening', 'io', 'policy']</td>
+          <td class="memname">list gridfire.__all__ = ['type', 'utils', 'engine', 'solver', 'exceptions', 'partition', 'reaction', 'screening', 'io', 'policy', 'config']</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">private</span></span>  </td>
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a3535aedf8a24266670197a715d91229c" name="a3535aedf8a24266670197a715d91229c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3535aedf8a24266670197a715d91229c">&#9670;&#160;</a></span>__author__</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">str gridfire.__author__ = <a class="el" href="#acb6c9c1b2920f0d1744a8e7198d2cf5b">_meta</a>['Author']</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a62cc4eb0aa62cc209ee4583b8cc0df52" name="a62cc4eb0aa62cc209ee4583b8cc0df52"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a62cc4eb0aa62cc209ee4583b8cc0df52">&#9670;&#160;</a></span>__description__</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire.__description__ = <a class="el" href="#acb6c9c1b2920f0d1744a8e7198d2cf5b">_meta</a>['Summary']</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a2aa7da424bb571416c8cfa93147b27ed" name="a2aa7da424bb571416c8cfa93147b27ed"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2aa7da424bb571416c8cfa93147b27ed">&#9670;&#160;</a></span>__email__</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">str gridfire.__email__ = <a class="el" href="#acb6c9c1b2920f0d1744a8e7198d2cf5b">_meta</a>['Author-email']</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a23f04b652e06ef7660bed6ce2f36def8" name="a23f04b652e06ef7660bed6ce2f36def8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a23f04b652e06ef7660bed6ce2f36def8">&#9670;&#160;</a></span>__license__</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">str gridfire.__license__ = <a class="el" href="#acb6c9c1b2920f0d1744a8e7198d2cf5b">_meta</a>['License']</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a75069cd30950ced7af0da9454e4cc921" name="a75069cd30950ced7af0da9454e4cc921"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a75069cd30950ced7af0da9454e4cc921">&#9670;&#160;</a></span>__url__</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">str gridfire.__url__ = <a class="el" href="#acb6c9c1b2920f0d1744a8e7198d2cf5b">_meta</a>['Home-page'] or _meta.get('Project-URL', '').split(',')[0].split(' ')[-1].strip()</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -182,12 +491,34 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
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         <tr>
-          <td class="memname">str gridfire.__version__ = &quot;v0.7.1_rc2&quot;</td>
+          <td class="memname">str gridfire.__version__ = <a class="el" href="#acb6c9c1b2920f0d1744a8e7198d2cf5b">_meta</a>['Version']</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">private</span></span>  </td>
+<span class="mlabels"><span class="mlabel private">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="acb6c9c1b2920f0d1744a8e7198d2cf5b" name="acb6c9c1b2920f0d1744a8e7198d2cf5b"></a>
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+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire._meta = importlib.metadata.metadata('gridfire')</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel protected">protected</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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--- a/docs/html/namespacegridfire.js
+++ b/docs/html/namespacegridfire.js
@@ -1,8 +1,12 @@
 var namespacegridfire =
 [
+    [ "config", "namespacegridfire_1_1config.html", "namespacegridfire_1_1config" ],
     [ "engine", "namespacegridfire_1_1engine.html", "namespacegridfire_1_1engine" ],
     [ "exceptions", "namespacegridfire_1_1exceptions.html", "namespacegridfire_1_1exceptions" ],
     [ "io", "namespacegridfire_1_1io.html", "namespacegridfire_1_1io" ],
+    [ "omp", "namespacegridfire_1_1omp.html", [
+      [ "log_not_in_parallel_mode", "namespacegridfire_1_1omp.html#a6f67f48327b81e229d6d1e0dea68e12b", null ]
+    ] ],
     [ "partition", "namespacegridfire_1_1partition.html", "namespacegridfire_1_1partition" ],
     [ "policy", "namespacegridfire_1_1policy.html", "namespacegridfire_1_1policy" ],
     [ "rates", "namespacegridfire_1_1rates.html", "namespacegridfire_1_1rates" ],
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     [ "trigger", "namespacegridfire_1_1trigger.html", "namespacegridfire_1_1trigger" ],
     [ "utils", "namespacegridfire_1_1utils.html", "namespacegridfire_1_1utils" ],
-    [ "NetIn", "structgridfire_1_1NetIn.html", "structgridfire_1_1NetIn" ],
-    [ "NetOut", "structgridfire_1_1NetOut.html", "structgridfire_1_1NetOut" ],
-    [ "IsArithmeticOrAD", "conceptgridfire_1_1IsArithmeticOrAD.html", null ],
+    [ "NetIn", "structgridfire_1_1_net_in.html", "structgridfire_1_1_net_in" ],
+    [ "NetOut", "structgridfire_1_1_net_out.html", "structgridfire_1_1_net_out" ],
+    [ "IsArithmeticOrAD", "conceptgridfire_1_1_is_arithmetic_or_a_d.html", null ],
+    [ "gf_author", "namespacegridfire.html#a1de3db5e65a2e834c55f458307cab68e", null ],
+    [ "gf_collaboration", "namespacegridfire.html#a454366ce631749963d3c6b387bcbc3e7", null ],
+    [ "gf_credits", "namespacegridfire.html#a787f9de5930793c2976d22426ae971b5", null ],
+    [ "gf_description", "namespacegridfire.html#afa60407432a1e563b9731ce298cf42bc", null ],
+    [ "gf_email", "namespacegridfire.html#ae6f8e40e5233e5c98c9c4290f518b72d", null ],
+    [ "gf_license", "namespacegridfire.html#a081c76fc9fbac9b5b380c8e4fa0e7be0", null ],
+    [ "gf_metadata", "namespacegridfire.html#a0ee5ace587287cdba8f9755a0ef0b498", null ],
+    [ "gf_url", "namespacegridfire.html#ae5ade7b2d801af88a79382441ec68277", null ],
+    [ "gf_version", "namespacegridfire.html#a45c5e5933ef14301b6f7ec2fff6a0966", null ],
     [ "__all__", "namespacegridfire.html#a2adfc910bd5466746bd71490d2cbdf1d", null ],
-    [ "__version__", "namespacegridfire.html#a14116c4fbbb07c2fa95826dc543771a2", null ]
+    [ "__author__", "namespacegridfire.html#a3535aedf8a24266670197a715d91229c", null ],
+    [ "__description__", "namespacegridfire.html#a62cc4eb0aa62cc209ee4583b8cc0df52", null ],
+    [ "__email__", "namespacegridfire.html#a2aa7da424bb571416c8cfa93147b27ed", null ],
+    [ "__license__", "namespacegridfire.html#a23f04b652e06ef7660bed6ce2f36def8", null ],
+    [ "__url__", "namespacegridfire.html#a75069cd30950ced7af0da9454e4cc921", null ],
+    [ "__version__", "namespacegridfire.html#a14116c4fbbb07c2fa95826dc543771a2", null ],
+    [ "_meta", "namespacegridfire.html#acb6c9c1b2920f0d1744a8e7198d2cf5b", null ]
 ];
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diff --git a/docs/html/namespacegridfire_1_1config.html b/docs/html/namespacegridfire_1_1config.html
new file mode 100644
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@@ -0,0 +1,137 @@
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+<html xmlns="http://www.w3.org/1999/xhtml" lang="en-US">
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+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=11"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: gridfire::config Namespace Reference</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
+<link href="search/search.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="search/searchdata.js"></script>
+<script type="text/javascript" src="search/search.js"></script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
+<link href="doxygen-awesome.css" rel="stylesheet" type="text/css"/>
+<link href="doxygen-awesome-sidebar-only.css" rel="stylesheet" type="text/css"/>
+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
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+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
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+/* @license-end */
+</script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
+<script type="text/javascript" src="menudata.js"></script>
+<script type="text/javascript" src="menu.js"></script>
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+  $(function() { init_search(); });
+});
+/* @license-end */
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+<div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
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+       class="ui-resizable-handle">
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
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+     onmouseout="return searchBox.OnSearchSelectHide()"
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#nested-classes">Classes</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::config Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
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+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1config_1_1_engine_view_config.html">EngineViewConfig</a></td></tr>
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+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1config_1_1_solver_config.html">SolverConfig</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1config_1_1_trigger_config.html">TriggerConfig</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1config.html">config</a></li>
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new file mode 100644
index 00000000..f1e5e860
--- /dev/null
+++ b/docs/html/namespacegridfire_1_1config.js
@@ -0,0 +1,11 @@
+var namespacegridfire_1_1config =
+[
+    [ "AdaptiveEngineViewConfig", "structgridfire_1_1config_1_1_adaptive_engine_view_config.html", "structgridfire_1_1config_1_1_adaptive_engine_view_config" ],
+    [ "BoundaryFluxConfig", "structgridfire_1_1config_1_1_boundary_flux_config.html", "structgridfire_1_1config_1_1_boundary_flux_config" ],
+    [ "EngineConfig", "structgridfire_1_1config_1_1_engine_config.html", "structgridfire_1_1config_1_1_engine_config" ],
+    [ "EngineViewConfig", "structgridfire_1_1config_1_1_engine_view_config.html", "structgridfire_1_1config_1_1_engine_view_config" ],
+    [ "GridFireConfig", "structgridfire_1_1config_1_1_grid_fire_config.html", "structgridfire_1_1config_1_1_grid_fire_config" ],
+    [ "PointSolverConfig", "structgridfire_1_1config_1_1_point_solver_config.html", "structgridfire_1_1config_1_1_point_solver_config" ],
+    [ "SolverConfig", "structgridfire_1_1config_1_1_solver_config.html", "structgridfire_1_1config_1_1_solver_config" ],
+    [ "TriggerConfig", "structgridfire_1_1config_1_1_trigger_config.html", "structgridfire_1_1config_1_1_trigger_config" ]
+];
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+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract class for engines supporting Jacobian and stoichiometry operations.  <a href="classgridfire_1_1engine_1_1_dynamic_engine.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1EnergyDerivatives.html">EnergyDerivatives</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1_energy_derivatives.html">EnergyDerivatives</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structure holding derivatives of energy generation rate with respect to T and rho.  <a href="structgridfire_1_1engine_1_1_energy_derivatives.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1Engine.html">Engine</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract base class for a reaction network engine.  <a href="classgridfire_1_1engine_1_1Engine.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine.html">Engine</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract base class for a reaction network engine.  <a href="classgridfire_1_1engine_1_1_engine.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1EngineView.html">EngineView</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_engine_view.html">EngineView</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract base class for a "view" of a reaction network engine.  <a href="classgridfire_1_1engine_1_1_engine_view.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A reaction network engine that uses a graph-based representation.  <a href="classgridfire_1_1engine_1_1_graph_engine.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html">MultiscalePartitioningEngineView</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">An engine view that partitions the reaction network into multiple groups based on timescales.  <a href="classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html">MultiscalePartitioningEngineView</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">An engine view that partitions the reaction network into multiple groups based on timescales.  <a href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A wrapper class for handling the network Jacobian matrix.  <a href="classgridfire_1_1engine_1_1NetworkJacobian.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A wrapper class for handling the network Jacobian matrix.  <a href="classgridfire_1_1engine_1_1_network_jacobian.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1NetworkPrimingEngineView.html">NetworkPrimingEngineView</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Provides a view of a <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> filtered to reactions involving a specified priming species.  <a href="classgridfire_1_1engine_1_1NetworkPrimingEngineView.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_network_priming_engine_view.html">NetworkPrimingEngineView</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Provides a view of a <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> filtered to reactions involving a specified priming species.  <a href="classgridfire_1_1engine_1_1_network_priming_engine_view.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html">PrimingReport</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Captures the result of a network priming operation.  <a href="structgridfire_1_1engine_1_1PrimingReport.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Captures the result of a network priming operation.  <a href="structgridfire_1_1engine_1_1_priming_report.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1StepDerivatives.html">StepDerivatives</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structure holding derivatives and energy generation for a network step.  <a href="structgridfire_1_1engine_1_1StepDerivatives.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_reaction.html">Reaction</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Represents a single nuclear reaction from a specific data source.  <a href="classgridfire_1_1engine_1_1_reaction.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1_reaction_set.html">ReactionSet</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structure holding derivatives and energy generation for a network step.  <a href="structgridfire_1_1engine_1_1_step_derivatives.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="concepts" name="concepts"></a>
 Concepts</h2></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">concept &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="conceptgridfire_1_1engine_1_1_engine_type.html">EngineType</a></td></tr>
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 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="typedef-members" name="typedef-members"></a>
 Typedefs</h2></td></tr>
-<tr class="memitem:af5175018d2d1e78a8826dd33ec6d675f" id="r_af5175018d2d1e78a8826dd33ec6d675f"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#af5175018d2d1e78a8826dd33ec6d675f">SparsityPattern</a> = std::vector&lt; std::pair&lt; size_t, size_t &gt; &gt;</td></tr>
-<tr class="memdesc:af5175018d2d1e78a8826dd33ec6d675f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Type alias for sparsity pattern representation.  <br /></td></tr>
-<tr class="separator:af5175018d2d1e78a8826dd33ec6d675f"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a4562b782e8096986a9b0cc95aa8c1c02" id="r_a4562b782e8096986a9b0cc95aa8c1c02"><td class="memItemLeft" align="right" valign="top">typedef CppAD::AD&lt; double &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a4562b782e8096986a9b0cc95aa8c1c02">ADDouble</a></td></tr>
+<tr class="memitem:a9de1791ec719c0a9b76b835703336870" id="r_a9de1791ec719c0a9b76b835703336870"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a9de1791ec719c0a9b76b835703336870">SparsityPattern</a> = std::vector&lt;std::pair&lt;size_t, size_t&gt;&gt;</td></tr>
+<tr class="memdesc:a9de1791ec719c0a9b76b835703336870"><td class="mdescLeft">&#160;</td><td class="mdescRight">Type alias for sparsity pattern representation.  <br /></td></tr>
+<tr class="separator:a9de1791ec719c0a9b76b835703336870"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4562b782e8096986a9b0cc95aa8c1c02" id="r_a4562b782e8096986a9b0cc95aa8c1c02"><td class="memItemLeft" align="right" valign="top">typedef CppAD::AD&lt; double &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4562b782e8096986a9b0cc95aa8c1c02">ADDouble</a></td></tr>
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-<tr class="memitem:a540b6420c7b6271717ec9b640140f6c0" id="r_a540b6420c7b6271717ec9b640140f6c0"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a540b6420c7b6271717ec9b640140f6c0">BuildDepthType</a> = std::variant&lt; <a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7">NetworkBuildDepth</a>, int &gt;</td></tr>
-<tr class="memdesc:a540b6420c7b6271717ec9b640140f6c0"><td class="mdescLeft">&#160;</td><td class="mdescRight">Variant specifying either a predefined NetworkBuildDepth or a custom integer depth.  <br /></td></tr>
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-<tr class="memitem:ac7974616b5fd465c4a42e3d882cdde6e" id="r_ac7974616b5fd465c4a42e3d882cdde6e"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#ac7974616b5fd465c4a42e3d882cdde6e">JacobianEntry</a> = std::pair&lt; std::pair&lt; fourdst::atomic::Species, fourdst::atomic::Species &gt;, double &gt;</td></tr>
-<tr class="memdesc:ac7974616b5fd465c4a42e3d882cdde6e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Represents an entry in the Jacobian matrix.  <br /></td></tr>
-<tr class="separator:ac7974616b5fd465c4a42e3d882cdde6e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a55cd7c313bbfafd5b6a1bcd6329ed99b" id="r_a55cd7c313bbfafd5b6a1bcd6329ed99b"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a55cd7c313bbfafd5b6a1bcd6329ed99b">BuildDepthType</a> = std::variant&lt;<a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7">NetworkBuildDepth</a>, int&gt;</td></tr>
+<tr class="memdesc:a55cd7c313bbfafd5b6a1bcd6329ed99b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Variant specifying either a predefined <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7" title="Specifies supported depths for building the reaction network.">NetworkBuildDepth</a> or a custom integer depth.  <br /></td></tr>
+<tr class="separator:a55cd7c313bbfafd5b6a1bcd6329ed99b"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:aa7b127f4fe99188e3d94ff11608d54f0"><td class="mdescLeft">&#160;</td><td class="mdescRight">Represents an entry in the Jacobian matrix.  <br /></td></tr>
+<tr class="separator:aa7b127f4fe99188e3d94ff11608d54f0"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="enum-members" name="enum-members"></a>
 Enumerations</h2></td></tr>
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-, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5aa4d855a061b3066dc14a3b12ed26b5456">STALE</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5aabb1ca97ec761fc37101737ba0aa2e7c5">ERROR</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5aa4905ac9d6a22bdfc1ae096094ce6248d">COUNT</a>
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+, <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5aa4d855a061b3066dc14a3b12ed26b5456">STALE</a>
+, <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5aabb1ca97ec761fc37101737ba0aa2e7c5">ERROR</a>
+, <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5aa4905ac9d6a22bdfc1ae096094ce6248d">COUNT</a>
  }</td></tr>
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+<tr class="memdesc:a4d057e41b489bf20744dfa8d2958ad5a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumeration of possible engine statuses.  <a href="#a4d057e41b489bf20744dfa8d2958ad5a">More...</a><br /></td></tr>
 <tr class="separator:a4d057e41b489bf20744dfa8d2958ad5a"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a775506bb881280f73264db27cb8388f9" id="r_a775506bb881280f73264db27cb8388f9"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> : uint32_t { <br />
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-, <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9a8211eaf8b0f0de1a6b0bf199da5975e1">REACLIB_STRONG</a> = 1 &lt;&lt; 0
-, <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9a08b95f789a0c024936e08b95c41865c4">WRL_BETA_MINUS</a> = 1 &lt;&lt; 1
-, <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9a49e3e12f2ea5b0d29df72a8a36f18d4a">WRL_BETA_PLUS</a> = 1 &lt;&lt; 2
+<tr class="memitem:a775506bb881280f73264db27cb8388f9" id="r_a775506bb881280f73264db27cb8388f9"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> : uint32_t { <br />
+&#160;&#160;<a class="el" href="#a775506bb881280f73264db27cb8388f9ab50339a10e1de285ac99d4c3990b8693">NONE</a> = 0
+, <a class="el" href="#a775506bb881280f73264db27cb8388f9a8211eaf8b0f0de1a6b0bf199da5975e1">REACLIB_STRONG</a> = 1 &lt;&lt; 0
+, <a class="el" href="#a775506bb881280f73264db27cb8388f9a08b95f789a0c024936e08b95c41865c4">WRL_BETA_MINUS</a> = 1 &lt;&lt; 1
+, <a class="el" href="#a775506bb881280f73264db27cb8388f9a49e3e12f2ea5b0d29df72a8a36f18d4a">WRL_BETA_PLUS</a> = 1 &lt;&lt; 2
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9af3d03bd75d332304afee1ab36498223e">WRL_ELECTRON_CAPTURE</a> = 1 &lt;&lt; 3
-, <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9a0712c13f98dca85d8d8bb9606283b955">WRL_POSITRON_CAPTURE</a> = 1 &lt;&lt; 4
-, <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9ab736eb13fff62c962f63232ec57f2692">REACLIB_WEAK</a> = 1 &lt;&lt; 5
-, <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9afc9a7c10ff86192133ca7a280783bfe4">WRL_WEAK</a> = WRL_BETA_MINUS | WRL_BETA_PLUS | WRL_ELECTRON_CAPTURE | WRL_POSITRON_CAPTURE
+&#160;&#160;<a class="el" href="#a775506bb881280f73264db27cb8388f9af3d03bd75d332304afee1ab36498223e">WRL_ELECTRON_CAPTURE</a> = 1 &lt;&lt; 3
+, <a class="el" href="#a775506bb881280f73264db27cb8388f9a0712c13f98dca85d8d8bb9606283b955">WRL_POSITRON_CAPTURE</a> = 1 &lt;&lt; 4
+, <a class="el" href="#a775506bb881280f73264db27cb8388f9ab736eb13fff62c962f63232ec57f2692">REACLIB_WEAK</a> = 1 &lt;&lt; 5
+, <a class="el" href="#a775506bb881280f73264db27cb8388f9afc9a7c10ff86192133ca7a280783bfe4">WRL_WEAK</a> = WRL_BETA_MINUS | WRL_BETA_PLUS | WRL_ELECTRON_CAPTURE | WRL_POSITRON_CAPTURE
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9af9885ed04411bef7b70f78b643c6a220">REACLIB</a> = REACLIB_STRONG | REACLIB_WEAK
-, <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9a5b39c8b553c821e7cddc6da64b5bd2ee">DEFAULT</a> = REACLIB
+&#160;&#160;<a class="el" href="#a775506bb881280f73264db27cb8388f9af9885ed04411bef7b70f78b643c6a220">REACLIB</a> = REACLIB_STRONG | REACLIB_WEAK
+, <a class="el" href="#a775506bb881280f73264db27cb8388f9a5b39c8b553c821e7cddc6da64b5bd2ee">DEFAULT</a> = REACLIB
 <br />
  }</td></tr>
-<tr class="memdesc:a775506bb881280f73264db27cb8388f9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Flags to specify which types of nuclear reactions to include when constructing a reaction network.  <a href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">More...</a><br /></td></tr>
+<tr class="memdesc:a775506bb881280f73264db27cb8388f9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Flags to specify which types of nuclear reactions to include when constructing a reaction network.  <a href="#a775506bb881280f73264db27cb8388f9">More...</a><br /></td></tr>
 <tr class="separator:a775506bb881280f73264db27cb8388f9"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a782fbc9eca00df10e4a204ae6da733e7" id="r_a782fbc9eca00df10e4a204ae6da733e7"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7">NetworkBuildDepth</a> { <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7abbd47109890259c0127154db1af26c75">Full</a> = -1
-, <a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7a928d0f1285ee7d36c1c2fa1b1b7a164c">Shallow</a> = 1
-, <a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7a264572d66aed5373d19dc80c7cde1f46">SecondOrder</a> = 2
-, <a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7a3fc719e07f9f63e7f11a3d4fb74b476f">ThirdOrder</a> = 3
+<tr class="memitem:a782fbc9eca00df10e4a204ae6da733e7" id="r_a782fbc9eca00df10e4a204ae6da733e7"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7">NetworkBuildDepth</a> { <br />
+&#160;&#160;<a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7abbd47109890259c0127154db1af26c75">Full</a> = -1
+, <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7a928d0f1285ee7d36c1c2fa1b1b7a164c">Shallow</a> = 1
+, <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7a264572d66aed5373d19dc80c7cde1f46">SecondOrder</a> = 2
+, <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7a3fc719e07f9f63e7f11a3d4fb74b476f">ThirdOrder</a> = 3
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7a100e3bf0197221c19b222badf42aa964">FourthOrder</a> = 4
-, <a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7a5105376c2b90747e00bed5bf2953dd56">FifthOrder</a> = 5
+&#160;&#160;<a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7a100e3bf0197221c19b222badf42aa964">FourthOrder</a> = 4
+, <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7a5105376c2b90747e00bed5bf2953dd56">FifthOrder</a> = 5
 <br />
  }</td></tr>
-<tr class="memdesc:a782fbc9eca00df10e4a204ae6da733e7"><td class="mdescLeft">&#160;</td><td class="mdescRight">Specifies supported depths for building the reaction network.  <a href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7">More...</a><br /></td></tr>
+<tr class="memdesc:a782fbc9eca00df10e4a204ae6da733e7"><td class="mdescLeft">&#160;</td><td class="mdescRight">Specifies supported depths for building the reaction network.  <a href="#a782fbc9eca00df10e4a204ae6da733e7">More...</a><br /></td></tr>
 <tr class="separator:a782fbc9eca00df10e4a204ae6da733e7"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a5387db1ec0b039955487fbc4c0034854" id="r_a5387db1ec0b039955487fbc4c0034854"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854">EngineTypes</a> { <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854a08ce7b1073452fc91801f941f131079f">GRAPH_ENGINE</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854aa07330e833c4faee6f5977cd87c733b6">ADAPTIVE_ENGINE_VIEW</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854a8bb7d6e738dfde400a8d022a3626c6d5">MULTISCALE_PARTITIONING_ENGINE_VIEW</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854a23901438f732b89f022567965207ad92">PRIMING_ENGINE_VIEW</a>
+<tr class="memitem:a5387db1ec0b039955487fbc4c0034854" id="r_a5387db1ec0b039955487fbc4c0034854"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5387db1ec0b039955487fbc4c0034854">EngineTypes</a> { <br />
+&#160;&#160;<a class="el" href="#a5387db1ec0b039955487fbc4c0034854a08ce7b1073452fc91801f941f131079f">GRAPH_ENGINE</a>
+, <a class="el" href="#a5387db1ec0b039955487fbc4c0034854aa07330e833c4faee6f5977cd87c733b6">ADAPTIVE_ENGINE_VIEW</a>
+, <a class="el" href="#a5387db1ec0b039955487fbc4c0034854a8bb7d6e738dfde400a8d022a3626c6d5">MULTISCALE_PARTITIONING_ENGINE_VIEW</a>
+, <a class="el" href="#a5387db1ec0b039955487fbc4c0034854a23901438f732b89f022567965207ad92">PRIMING_ENGINE_VIEW</a>
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854a33b468ddf562923b7641ab60bb6aa708">DEFINED_ENGINE_VIEW</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854a048f6da02134ba0aedf95f8171611bf3">FILE_DEFINED_ENGINE_VIEW</a>
+&#160;&#160;<a class="el" href="#a5387db1ec0b039955487fbc4c0034854a33b468ddf562923b7641ab60bb6aa708">DEFINED_ENGINE_VIEW</a>
+, <a class="el" href="#a5387db1ec0b039955487fbc4c0034854a048f6da02134ba0aedf95f8171611bf3">FILE_DEFINED_ENGINE_VIEW</a>
 <br />
  }</td></tr>
-<tr class="memdesc:a5387db1ec0b039955487fbc4c0034854"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumeration of different engine types available in GridFire.  <a href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854">More...</a><br /></td></tr>
+<tr class="memdesc:a5387db1ec0b039955487fbc4c0034854"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumeration of different engine types available in GridFire.  <a href="#a5387db1ec0b039955487fbc4c0034854">More...</a><br /></td></tr>
 <tr class="separator:a5387db1ec0b039955487fbc4c0034854"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ada706e6a92b733f6be85aa4425b135c1" id="r_ada706e6a92b733f6be85aa4425b135c1"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1">PrimingReportStatus</a> { <a class="el" href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1ad0749aaba8b833466dfcbb0428e4f89c">SUCCESS</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1aa79c9fd21a71b9db74af815d8fed8397">ALREADY_PRIMED</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1afae3583994fb36fc9a5efcfe0a9b35c9">SOLVER_FAILURE</a>
+<tr class="memitem:ada706e6a92b733f6be85aa4425b135c1" id="r_ada706e6a92b733f6be85aa4425b135c1"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ada706e6a92b733f6be85aa4425b135c1">PrimingReportStatus</a> { <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1ad0749aaba8b833466dfcbb0428e4f89c">SUCCESS</a>
+, <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1aa79c9fd21a71b9db74af815d8fed8397">ALREADY_PRIMED</a>
+, <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1afae3583994fb36fc9a5efcfe0a9b35c9">SOLVER_FAILURE</a>
  }</td></tr>
-<tr class="memdesc:ada706e6a92b733f6be85aa4425b135c1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumerates outcome codes for a network priming operation.  <a href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1">More...</a><br /></td></tr>
+<tr class="memdesc:ada706e6a92b733f6be85aa4425b135c1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumerates outcome codes for a network priming operation.  <a href="#ada706e6a92b733f6be85aa4425b135c1">More...</a><br /></td></tr>
 <tr class="separator:ada706e6a92b733f6be85aa4425b135c1"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a83c9d755597668bba3cf00cd0ea10ee3" id="r_a83c9d755597668bba3cf00cd0ea10ee3"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a> { <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3a18ff74f43da410c5529f7d6fca84f115">ACTIVE</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3a07516dd4b4fea20466b56654d553549f">EQUILIBRIUM</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3a898112b589038d0a221e6a3eae3ba64f">INACTIVE_FLOW</a>
-, <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3a4b8e04af593e6ce16901570c52fe5607">NOT_PRESENT</a>
+<tr class="memitem:a83c9d755597668bba3cf00cd0ea10ee3" id="r_a83c9d755597668bba3cf00cd0ea10ee3"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a> { <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3a18ff74f43da410c5529f7d6fca84f115">ACTIVE</a>
+, <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3a07516dd4b4fea20466b56654d553549f">EQUILIBRIUM</a>
+, <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3a898112b589038d0a221e6a3eae3ba64f">INACTIVE_FLOW</a>
+, <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3a4b8e04af593e6ce16901570c52fe5607">NOT_PRESENT</a>
  }</td></tr>
-<tr class="memdesc:a83c9d755597668bba3cf00cd0ea10ee3"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumerates the status of a species in the simulation.  <a href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">More...</a><br /></td></tr>
+<tr class="memdesc:a83c9d755597668bba3cf00cd0ea10ee3"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumerates the status of a species in the simulation.  <a href="#a83c9d755597668bba3cf00cd0ea10ee3">More...</a><br /></td></tr>
 <tr class="separator:a83c9d755597668bba3cf00cd0ea10ee3"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
-<tr class="memitem:a006018e8e5f80ddb857009dbad962753" id="r_a006018e8e5f80ddb857009dbad962753"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a006018e8e5f80ddb857009dbad962753">EngineStatus_to_string</a> (const <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> status)</td></tr>
-<tr class="memdesc:a006018e8e5f80ddb857009dbad962753"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert EngineStatus enum to string representation.  <br /></td></tr>
+<tr class="memitem:a006018e8e5f80ddb857009dbad962753" id="r_a006018e8e5f80ddb857009dbad962753"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a006018e8e5f80ddb857009dbad962753">EngineStatus_to_string</a> (const <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a> status)</td></tr>
+<tr class="memdesc:a006018e8e5f80ddb857009dbad962753"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5a" title="Enumeration of possible engine statuses.">EngineStatus</a> enum to string representation.  <br /></td></tr>
 <tr class="separator:a006018e8e5f80ddb857009dbad962753"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a956ff12cef0dda2b9209ceab68199090" id="r_a956ff12cef0dda2b9209ceab68199090"><td class="memItemLeft" align="right" valign="top">constexpr auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a956ff12cef0dda2b9209ceab68199090">to_underlying</a> (<a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> f) noexcept</td></tr>
-<tr class="memdesc:a956ff12cef0dda2b9209ceab68199090"><td class="mdescLeft">&#160;</td><td class="mdescRight">Helper function to convert NetworkConstructionFlags to their underlying integer type.  <br /></td></tr>
+<tr class="memitem:a956ff12cef0dda2b9209ceab68199090" id="r_a956ff12cef0dda2b9209ceab68199090"><td class="memItemLeft" align="right" valign="top">constexpr auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a956ff12cef0dda2b9209ceab68199090">to_underlying</a> (<a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> f) noexcept</td></tr>
+<tr class="memdesc:a956ff12cef0dda2b9209ceab68199090"><td class="mdescLeft">&#160;</td><td class="mdescRight">Helper function to convert <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> to their underlying integer type.  <br /></td></tr>
 <tr class="separator:a956ff12cef0dda2b9209ceab68199090"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a69216b717d99f53cf2d1419e23b69119" id="r_a69216b717d99f53cf2d1419e23b69119"><td class="memItemLeft" align="right" valign="top"><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a69216b717d99f53cf2d1419e23b69119">operator|</a> (const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> lhs, const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> rhs)</td></tr>
-<tr class="memdesc:a69216b717d99f53cf2d1419e23b69119"><td class="mdescLeft">&#160;</td><td class="mdescRight">Bitwise OR operator for NetworkConstructionFlags.  <br /></td></tr>
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 <tr class="separator:a69216b717d99f53cf2d1419e23b69119"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:ace3a790fb57920fd12328fa9c5a3a1de"><td class="mdescLeft">&#160;</td><td class="mdescRight">Bitwise AND operator for NetworkConstructionFlags.  <br /></td></tr>
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+<tr class="memdesc:ace3a790fb57920fd12328fa9c5a3a1de"><td class="mdescLeft">&#160;</td><td class="mdescRight">Bitwise AND operator for <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a>.  <br /></td></tr>
 <tr class="separator:ace3a790fb57920fd12328fa9c5a3a1de"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a7377e1152d165cfb9eadc16c5dc2f492"><td class="mdescLeft">&#160;</td><td class="mdescRight">Checks if a specific flag is set within a NetworkConstructionFlags value.  <br /></td></tr>
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+<tr class="memdesc:a7377e1152d165cfb9eadc16c5dc2f492"><td class="mdescLeft">&#160;</td><td class="mdescRight">Checks if a specific flag is set within a <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value.  <br /></td></tr>
 <tr class="separator:a7377e1152d165cfb9eadc16c5dc2f492"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:aea27cb9ed6d613ae9e4b7fa89767861a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Converts NetworkConstructionFlags to a human-readable string.  <br /></td></tr>
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+<tr class="memdesc:aea27cb9ed6d613ae9e4b7fa89767861a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Converts <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> to a human-readable string.  <br /></td></tr>
 <tr class="separator:aea27cb9ed6d613ae9e4b7fa89767861a"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 <tr class="memdesc:a7b64607db49cfc042cbee63be5351549"><td class="mdescLeft">&#160;</td><td class="mdescRight">Builds a nuclear reaction network from the Reaclib library based on an initial composition.  <br /></td></tr>
 <tr class="separator:a7b64607db49cfc042cbee63be5351549"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:aa6552165b4b36ea227479567880d8402"><td class="mdescLeft">&#160;</td><td class="mdescRight">Primes absent species in the network to their equilibrium abundances.  <br /></td></tr>
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-<tr class="memitem:a589015f6509c051c16b3e4ebc7550dd2" id="r_a589015f6509c051c16b3e4ebc7550dd2"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a589015f6509c051c16b3e4ebc7550dd2">engine_type_to_string</a> (const <a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854">EngineTypes</a> type)</td></tr>
-<tr class="memdesc:a589015f6509c051c16b3e4ebc7550dd2"><td class="mdescLeft">&#160;</td><td class="mdescRight">Converts an EngineTypes enum value to its corresponding string representation.  <br /></td></tr>
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+<tr class="memdesc:a59778f067222e7c5e8932a7101b25807"><td class="mdescLeft">&#160;</td><td class="mdescRight">Primes absent species in the network to their equilibrium abundances.  <br /></td></tr>
+<tr class="separator:a59778f067222e7c5e8932a7101b25807"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a589015f6509c051c16b3e4ebc7550dd2" id="r_a589015f6509c051c16b3e4ebc7550dd2"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a589015f6509c051c16b3e4ebc7550dd2">engine_type_to_string</a> (const <a class="el" href="#a5387db1ec0b039955487fbc4c0034854">EngineTypes</a> type)</td></tr>
+<tr class="memdesc:a589015f6509c051c16b3e4ebc7550dd2"><td class="mdescLeft">&#160;</td><td class="mdescRight">Converts an <a class="el" href="#a5387db1ec0b039955487fbc4c0034854" title="Enumeration of different engine types available in GridFire.">EngineTypes</a> enum value to its corresponding string representation.  <br /></td></tr>
 <tr class="separator:a589015f6509c051c16b3e4ebc7550dd2"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:afacda3b01618f041a81fa516547564fa" id="r_afacda3b01618f041a81fa516547564fa"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#afacda3b01618f041a81fa516547564fa">regularize_jacobian</a> (const <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> &amp;jacobian, const fourdst::composition::CompositionAbstract &amp;comp, std::optional&lt; quill::Logger * &gt; logger=std::nullopt)</td></tr>
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 <tr class="separator:afacda3b01618f041a81fa516547564fa"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a6d1bd8b2b8161b50a260bf012c3f058f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert a SpeciesStatus enum value to its string representation.  <br /></td></tr>
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+<tr class="memdesc:a6d1bd8b2b8161b50a260bf012c3f058f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert a <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a> enum value to its string representation.  <br /></td></tr>
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 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
 Variables</h2></td></tr>
-<tr class="memitem:acbe76badc77637ba89e4017130d110b1" id="r_acbe76badc77637ba89e4017130d110b1"><td class="memItemLeft" align="right" valign="top">static constexpr double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#acbe76badc77637ba89e4017130d110b1">MIN_DENSITY_THRESHOLD</a> = 1e-18</td></tr>
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 <tr class="memdesc:acbe76badc77637ba89e4017130d110b1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Minimum density threshold below which reactions are ignored.  <br /></td></tr>
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 <tr class="memdesc:a35ed65ea4d304098e4de3e0f0191304f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Minimum abundance threshold below which species are ignored.  <br /></td></tr>
 <tr class="separator:a35ed65ea4d304098e4de3e0f0191304f"><td class="memSeparator" colspan="2">&#160;</td></tr>
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 <tr class="memdesc:ad84c68dc3c04ab08a9dc8cee5fde28dd"><td class="mdescLeft">&#160;</td><td class="mdescRight">Minimum value for Jacobian matrix entries.  <br /></td></tr>
 <tr class="separator:ad84c68dc3c04ab08a9dc8cee5fde28dd"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ae769a7e049c0b79e58675103b21f918f" id="r_ae769a7e049c0b79e58675103b21f918f"><td class="memItemLeft" align="right" valign="top">constexpr double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#ae769a7e049c0b79e58675103b21f918f">MIN_ABUNDANCE_TO_CONTRIBUTE_TO_JACOBIAN</a> = 1e-100</td></tr>
+<tr class="memitem:ae769a7e049c0b79e58675103b21f918f" id="r_ae769a7e049c0b79e58675103b21f918f"><td class="memItemLeft" align="right" valign="top">constexpr double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae769a7e049c0b79e58675103b21f918f">MIN_ABUNDANCE_TO_CONTRIBUTE_TO_JACOBIAN</a> = 1e-100</td></tr>
 <tr class="memdesc:ae769a7e049c0b79e58675103b21f918f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Minimum abundance for a species to contribute to the Jacobian.  <br /></td></tr>
 <tr class="separator:ae769a7e049c0b79e58675103b21f918f"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a1ec7640033e9b4418220e91f17bde16b" id="r_a1ec7640033e9b4418220e91f17bde16b"><td class="memItemLeft" align="right" valign="top">std::map&lt; <a class="el" href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1">PrimingReportStatus</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html#a1ec7640033e9b4418220e91f17bde16b">PrimingReportStatusStrings</a></td></tr>
-<tr class="memdesc:a1ec7640033e9b4418220e91f17bde16b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mapping from PrimingReportStatus codes to human-readable strings.  <br /></td></tr>
+<tr class="memitem:a1ec7640033e9b4418220e91f17bde16b" id="r_a1ec7640033e9b4418220e91f17bde16b"><td class="memItemLeft" align="right" valign="top">std::map&lt; <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1">PrimingReportStatus</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1ec7640033e9b4418220e91f17bde16b">PrimingReportStatusStrings</a></td></tr>
+<tr class="memdesc:a1ec7640033e9b4418220e91f17bde16b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mapping from <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1" title="Enumerates outcome codes for a network priming operation.">PrimingReportStatus</a> codes to human-readable strings.  <br /></td></tr>
 <tr class="separator:a1ec7640033e9b4418220e91f17bde16b"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Typedef Documentation</h2>
@@ -298,7 +313,7 @@ Variables</h2></td></tr>
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">typedef CppAD::AD&lt;double&gt; <a class="el" href="namespacegridfire_1_1engine.html#a4562b782e8096986a9b0cc95aa8c1c02">gridfire::engine::ADDouble</a></td>
+          <td class="memname">typedef CppAD::AD&lt;double&gt; <a class="el" href="#a4562b782e8096986a9b0cc95aa8c1c02">gridfire::engine::ADDouble</a></td>
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@@ -308,32 +323,32 @@ Variables</h2></td></tr>
 
 </div>
 </div>
-<a id="a540b6420c7b6271717ec9b640140f6c0" name="a540b6420c7b6271717ec9b640140f6c0"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a540b6420c7b6271717ec9b640140f6c0">&#9670;&#160;</a></span>BuildDepthType</h2>
+<a id="a55cd7c313bbfafd5b6a1bcd6329ed99b" name="a55cd7c313bbfafd5b6a1bcd6329ed99b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a55cd7c313bbfafd5b6a1bcd6329ed99b">&#9670;&#160;</a></span>BuildDepthType</h2>
 
 <div class="memitem">
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       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a540b6420c7b6271717ec9b640140f6c0">gridfire::engine::BuildDepthType</a></td>
+          <td class="memname">using <a class="el" href="#a55cd7c313bbfafd5b6a1bcd6329ed99b">gridfire::engine::BuildDepthType</a> = std::variant&lt;<a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7">NetworkBuildDepth</a>, int&gt;</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
-<p>Variant specifying either a predefined NetworkBuildDepth or a custom integer depth. </p>
+<p>Variant specifying either a predefined <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7" title="Specifies supported depths for building the reaction network.">NetworkBuildDepth</a> or a custom integer depth. </p>
 <dl class="section pre"><dt>Precondition</dt><dd>If using the integer alternative, the value must be &gt;= 0 or -1 to indicate a full build. </dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>The network builder will interpret and apply the specified depth to control reaction expansion. </dd></dl>
 
 </div>
 </div>
-<a id="ac7974616b5fd465c4a42e3d882cdde6e" name="ac7974616b5fd465c4a42e3d882cdde6e"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac7974616b5fd465c4a42e3d882cdde6e">&#9670;&#160;</a></span>JacobianEntry</h2>
+<a id="aa7b127f4fe99188e3d94ff11608d54f0" name="aa7b127f4fe99188e3d94ff11608d54f0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa7b127f4fe99188e3d94ff11608d54f0">&#9670;&#160;</a></span>JacobianEntry</h2>
 
 <div class="memitem">
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       <table class="memname">
         <tr>
-          <td class="memname">using <a class="el" href="namespacegridfire_1_1engine.html#ac7974616b5fd465c4a42e3d882cdde6e">gridfire::engine::JacobianEntry</a> = typedef std::pair&lt;std::pair&lt;fourdst::atomic::Species, fourdst::atomic::Species&gt;, double&gt;</td>
+          <td class="memname">using <a class="el" href="#aa7b127f4fe99188e3d94ff11608d54f0">gridfire::engine::JacobianEntry</a> = std::pair&lt;std::pair&lt;fourdst::atomic::Species, fourdst::atomic::Species&gt;, double&gt;</td>
         </tr>
       </table>
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@@ -342,14 +357,14 @@ Variables</h2></td></tr>
 
 </div>
 </div>
-<a id="af5175018d2d1e78a8826dd33ec6d675f" name="af5175018d2d1e78a8826dd33ec6d675f"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#af5175018d2d1e78a8826dd33ec6d675f">&#9670;&#160;</a></span>SparsityPattern</h2>
+<a id="a9de1791ec719c0a9b76b835703336870" name="a9de1791ec719c0a9b76b835703336870"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9de1791ec719c0a9b76b835703336870">&#9670;&#160;</a></span>SparsityPattern</h2>
 
 <div class="memitem">
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       <table class="memname">
         <tr>
-          <td class="memname">using <a class="el" href="namespacegridfire_1_1engine.html#af5175018d2d1e78a8826dd33ec6d675f">gridfire::engine::SparsityPattern</a> = typedef std::vector&lt;std::pair&lt;size_t, size_t&gt; &gt;</td>
+          <td class="memname">using <a class="el" href="#a9de1791ec719c0a9b76b835703336870">gridfire::engine::SparsityPattern</a> = std::vector&lt;std::pair&lt;size_t, size_t&gt;&gt;</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -369,12 +384,12 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a></td>
+          <td class="memname">enum class <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5a">gridfire::engine::EngineStatus</a></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -400,12 +415,12 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854">gridfire::engine::EngineTypes</a></td>
+          <td class="memname">enum class <a class="el" href="#a5387db1ec0b039955487fbc4c0034854">gridfire::engine::EngineTypes</a></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -440,12 +455,12 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7">gridfire::engine::NetworkBuildDepth</a></td>
+          <td class="memname">enum class <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7">gridfire::engine::NetworkBuildDepth</a></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -459,7 +474,7 @@ Variables</h2></td></tr>
 <li>FourthOrder: Include reactions up to fourth order (depth = 4).</li>
 <li>FifthOrder: Include reactions up to fifth order (depth = 5).</li>
 </ul>
-<dl class="section note"><dt>Note</dt><dd>For custom build depths, see BuildDepthType. </dd></dl>
+<dl class="section note"><dt>Note</dt><dd>For custom build depths, see <a class="el" href="#a55cd7c313bbfafd5b6a1bcd6329ed99b" title="Variant specifying either a predefined NetworkBuildDepth or a custom integer depth.">BuildDepthType</a>. </dd></dl>
 <table class="fieldtable">
 <tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="a782fbc9eca00df10e4a204ae6da733e7abbd47109890259c0127154db1af26c75" name="a782fbc9eca00df10e4a204ae6da733e7abbd47109890259c0127154db1af26c75"></a>Full&#160;</td><td class="fielddoc"></td></tr>
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   <td class="mlabels-left">
       <table class="memname">
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-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">gridfire::engine::NetworkConstructionFlags</a> : uint32_t</td>
+          <td class="memname">enum class <a class="el" href="#a775506bb881280f73264db27cb8388f9">gridfire::engine::NetworkConstructionFlags</a> : uint32_t</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -518,12 +533,12 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1">gridfire::engine::PrimingReportStatus</a></td>
+          <td class="memname">enum class <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1">gridfire::engine::PrimingReportStatus</a></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -538,7 +553,7 @@ Variables</h2></td></tr>
 <li>FAILED_TO_FIND_PRIMING_REACTIONS: No reactions containing the priming species were found.</li>
 <li>BASE_NETWORK_TOO_SHALLOW: The provided base network depth was insufficient for priming.</li>
 </ul>
-<dl class="section see"><dt>See also</dt><dd><a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html" title="Captures the result of a network priming operation.">PrimingReport</a> for data associated with each status. </dd></dl>
+<dl class="section see"><dt>See also</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" title="Captures the result of a network priming operation.">PrimingReport</a> for data associated with each status. </dd></dl>
 <table class="fieldtable">
 <tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="ada706e6a92b733f6be85aa4425b135c1ad0749aaba8b833466dfcbb0428e4f89c" name="ada706e6a92b733f6be85aa4425b135c1ad0749aaba8b833466dfcbb0428e4f89c"></a>SUCCESS&#160;</td><td class="fielddoc"></td></tr>
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@@ -557,12 +572,12 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">gridfire::engine::SpeciesStatus</a></td>
+          <td class="memname">enum class <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3">gridfire::engine::SpeciesStatus</a></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -591,33 +606,24 @@ Variables</h2></td></tr>
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       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html">ReactionSet</a> gridfire::engine::build_nuclear_network </td>
+          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> gridfire::engine::build_nuclear_network </td>
           <td>(</td>
-          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;&#160;</td>
-          <td class="paramname"><em>composition</em>, </td>
+          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>composition</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakRateInterpolator.html">rates::weak::WeakRateInterpolator</a> &amp;&#160;</td>
-          <td class="paramname"><em>weakInterpolator</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html">rates::weak::WeakRateInterpolator</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>weakInterpolator</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine.html#a540b6420c7b6271717ec9b640140f6c0">BuildDepthType</a>&#160;</td>
-          <td class="paramname"><em>maxLayers</em> = <code><a class="el" href="namespacegridfire_1_1engine.html#a782fbc9eca00df10e4a204ae6da733e7abbd47109890259c0127154db1af26c75">NetworkBuildDepth::Full</a></code>, </td>
+          <td class="paramtype"><a class="el" href="#a55cd7c313bbfafd5b6a1bcd6329ed99b">BuildDepthType</a></td>          <td class="paramname"><span class="paramname"><em>maxLayers</em></span><span class="paramdefsep"> = </span><span class="paramdefval"><a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7abbd47109890259c0127154db1af26c75">NetworkBuildDepth::Full</a></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>ReactionTypes</em> = <code><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9a5b39c8b553c821e7cddc6da64b5bd2ee">NetworkConstructionFlags::DEFAULT</a></code>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype"><a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>ReactionTypes</em></span><span class="paramdefsep"> = </span><span class="paramdefval"><a class="el" href="#a775506bb881280f73264db27cb8388f9a5b39c8b553c821e7cddc6da64b5bd2ee">NetworkConstructionFlags::DEFAULT</a></span>&#160;)</td>
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@@ -629,7 +635,7 @@ Variables</h2></td></tr>
   <table class="params">
     <tr><td class="paramname">composition</td><td>Mapping of isotopic species to their mass fractions; species with positive mass fraction seed the network. </td></tr>
     <tr><td class="paramname">weakInterpolator</td><td>Interpolator to build weak rates from. Must be constructed and owned by the caller. </td></tr>
-    <tr><td class="paramname">maxLayers</td><td>Variant specifying either a predefined NetworkBuildDepth or a custom integer depth; negative depth (Full) collects all reactions, zero is invalid. </td></tr>
+    <tr><td class="paramname">maxLayers</td><td>Variant specifying either a predefined <a class="el" href="#a782fbc9eca00df10e4a204ae6da733e7" title="Specifies supported depths for building the reaction network.">NetworkBuildDepth</a> or a custom integer depth; negative depth (Full) collects all reactions, zero is invalid. </td></tr>
     <tr><td class="paramname">ReactionTypes</td><td></td></tr>
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   </dd>
@@ -658,24 +664,23 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr std::string_view gridfire::engine::engine_type_to_string </td>
+          <td class="memname">std::string_view gridfire::engine::engine_type_to_string </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a5387db1ec0b039955487fbc4c0034854">EngineTypes</a>&#160;</td>
-          <td class="paramname"><em>type</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="#a5387db1ec0b039955487fbc4c0034854">EngineTypes</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">constexpr</span></span>  </td>
+<span class="mlabels"><span class="mlabel constexpr">constexpr</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Converts an EngineTypes enum value to its corresponding string representation. </p>
+<p>Converts an <a class="el" href="#a5387db1ec0b039955487fbc4c0034854" title="Enumeration of different engine types available in GridFire.">EngineTypes</a> enum value to its corresponding string representation. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">type</td><td>The EngineTypes enum value to convert. </td></tr>
+    <tr><td class="paramname">type</td><td>The <a class="el" href="#a5387db1ec0b039955487fbc4c0034854" title="Enumeration of different engine types available in GridFire.">EngineTypes</a> enum value to convert. </td></tr>
   </table>
   </dd>
 </dl>
@@ -693,28 +698,27 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr std::string_view gridfire::engine::EngineStatus_to_string </td>
+          <td class="memname">std::string_view gridfire::engine::EngineStatus_to_string </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a>&#160;</td>
-          <td class="paramname"><em>status</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5a">EngineStatus</a></td>          <td class="paramname"><span class="paramname"><em>status</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">constexpr</span></span>  </td>
+<span class="mlabels"><span class="mlabel constexpr">constexpr</span></span>  </td>
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 </table>
 </div><div class="memdoc">
 
-<p>Convert EngineStatus enum to string representation. </p>
+<p>Convert <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5a" title="Enumeration of possible engine statuses.">EngineStatus</a> enum to string representation. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">status</td><td>The EngineStatus value to convert. </td></tr>
+    <tr><td class="paramname">status</td><td>The <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5a" title="Enumeration of possible engine statuses.">EngineStatus</a> value to convert. </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd>A string_view representing the name of the EngineStatus. </dd></dl>
+<dl class="section return"><dt>Returns</dt><dd>A string_view representing the name of the <a class="el" href="#a4d057e41b489bf20744dfa8d2958ad5a" title="Enumeration of possible engine statuses.">EngineStatus</a>. </dd></dl>
 
 </div>
 </div>
@@ -730,33 +734,26 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
         <tr>
           <td class="memname">bool gridfire::engine::has_flag </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>flags</em>, </td>
+          <td class="paramtype">const <a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>flags</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>flag_to_check</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const <a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>flag_to_check</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Checks if a specific flag is set within a NetworkConstructionFlags value. </p>
-<p>This function determines whether a particular flag is present in a given NetworkConstructionFlags value.</p>
+<p>Checks if a specific flag is set within a <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value. </p>
+<p>This function determines whether a particular flag is present in a given <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">flags</td><td>The NetworkConstructionFlags value to check. </td></tr>
+    <tr><td class="paramname">flags</td><td>The <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value to check. </td></tr>
     <tr><td class="paramname">flag_to_check</td><td>The specific flag to look for. </td></tr>
   </table>
   </dd>
@@ -777,23 +774,22 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
         <tr>
           <td class="memname">std::string gridfire::engine::NetworkConstructionFlagsToString </td>
           <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>flags</em></td><td>)</td>
+          <td class="paramtype"><a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>flags</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Converts NetworkConstructionFlags to a human-readable string. </p>
-<p>This function generates a comma-separated string representation of the set flags within a NetworkConstructionFlags value. If no flags are set, it returns "No reactions".</p>
+<p>Converts <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> to a human-readable string. </p>
+<p>This function generates a comma-separated string representation of the set flags within a <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value. If no flags are set, it returns "No reactions".</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">flags</td><td>The NetworkConstructionFlags value to convert. </td></tr>
+    <tr><td class="paramname">flags</td><td>The <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value to convert. </td></tr>
   </table>
   </dd>
 </dl>
@@ -811,40 +807,33 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> gridfire::engine::operator&amp; </td>
+          <td class="memname"><a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> gridfire::engine::operator&amp; </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>lhs</em>, </td>
+          <td class="paramtype">const <a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>lhs</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>rhs</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const <a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>rhs</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Bitwise AND operator for NetworkConstructionFlags. </p>
-<p>This operator allows checking for common flags between two NetworkConstructionFlags values using the bitwise AND operation.</p>
+<p>Bitwise AND operator for <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a>. </p>
+<p>This operator allows checking for common flags between two <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> values using the bitwise AND operation.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">lhs</td><td>The left-hand side NetworkConstructionFlags value. </td></tr>
-    <tr><td class="paramname">rhs</td><td>The right-hand side NetworkConstructionFlags value. </td></tr>
+    <tr><td class="paramname">lhs</td><td>The left-hand side <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value. </td></tr>
+    <tr><td class="paramname">rhs</td><td>The right-hand side <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value. </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd>A new NetworkConstructionFlags value representing the intersection of the two inputs. </dd></dl>
+<dl class="section return"><dt>Returns</dt><dd>A new <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value representing the intersection of the two inputs. </dd></dl>
 
 </div>
 </div>
@@ -858,71 +847,61 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> gridfire::engine::operator| </td>
+          <td class="memname"><a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a> gridfire::engine::operator| </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>lhs</em>, </td>
+          <td class="paramtype">const <a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>lhs</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>rhs</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const <a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>rhs</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Bitwise OR operator for NetworkConstructionFlags. </p>
-<p>This operator allows combining two NetworkConstructionFlags values using the bitwise OR operation.</p>
+<p>Bitwise OR operator for <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a>. </p>
+<p>This operator allows combining two <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> values using the bitwise OR operation.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">lhs</td><td>The left-hand side NetworkConstructionFlags value. </td></tr>
-    <tr><td class="paramname">rhs</td><td>The right-hand side NetworkConstructionFlags value. </td></tr>
+    <tr><td class="paramname">lhs</td><td>The left-hand side <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value. </td></tr>
+    <tr><td class="paramname">rhs</td><td>The right-hand side <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value. </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd>A new NetworkConstructionFlags value representing the combination of the two inputs. </dd></dl>
+<dl class="section return"><dt>Returns</dt><dd>A new <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value representing the combination of the two inputs. </dd></dl>
 
 </div>
 </div>
-<a id="aa6552165b4b36ea227479567880d8402" name="aa6552165b4b36ea227479567880d8402"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa6552165b4b36ea227479567880d8402">&#9670;&#160;</a></span>primeNetwork()</h2>
+<a id="a59778f067222e7c5e8932a7101b25807" name="a59778f067222e7c5e8932a7101b25807"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a59778f067222e7c5e8932a7101b25807">&#9670;&#160;</a></span>primeNetwork()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html">PrimingReport</a> gridfire::engine::primeNetwork </td>
+          <td class="memname"><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html">PrimingReport</a> gridfire::engine::primeNetwork </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="structgridfire_1_1NetIn.html">NetIn</a> &amp;&#160;</td>
-          <td class="paramname"><em>netIn</em>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1GraphEngine.html">GraphEngine</a> &amp;&#160;</td>
-          <td class="paramname"><em>engine</em>, </td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::optional&lt; std::vector&lt; <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">reaction::ReactionType</a> &gt; &gt; &amp;&#160;</td>
-          <td class="paramname"><em>ignoredReactionTypes</em>&#160;</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::optional&lt; std::vector&lt; <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">reaction::ReactionType</a> &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>ignoredReactionTypes</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -932,15 +911,16 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
 <p>Refer to <a class="el" href="priming_8cpp.html">priming.cpp</a> for implementation details on logging, algorithmic steps, and error handling.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td></td></tr>
     <tr><td class="paramname">netIn</td><td>Input network data containing initial composition, temperature, and density. </td></tr>
-    <tr><td class="paramname">engine</td><td><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> used to build and evaluate the reaction network. </td></tr>
+    <tr><td class="paramname">engine</td><td><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> used to build and evaluate the reaction network. </td></tr>
     <tr><td class="paramname">ignoredReactionTypes</td><td>Types of reactions to ignore during priming (e.g., weak reactions). </td></tr>
   </table>
   </dd>
 </dl>
 <dl class="section pre"><dt>Precondition</dt><dd>netIn.composition defines species and their mass fractions; engine is constructed with a valid network. </dd></dl>
 <dl class="section post"><dt>Postcondition</dt><dd>engine.networkReactions restored to its initial state; returned report contains primedComposition, massFractionChanges for each species, success flag, and status code. </dd></dl>
-<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html" title="Captures the result of a network priming operation.">PrimingReport</a> encapsulating the results of the priming operation. </dd></dl>
+<dl class="section return"><dt>Returns</dt><dd><a class="el" href="structgridfire_1_1engine_1_1_priming_report.html" title="Captures the result of a network priming operation.">PrimingReport</a> encapsulating the results of the priming operation. </dd></dl>
 
 </div>
 </div>
@@ -951,27 +931,19 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a> gridfire::engine::regularize_jacobian </td>
+          <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::regularize_jacobian </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a> &amp;&#160;</td>
-          <td class="paramname"><em>jacobian</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>jacobian</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;&#160;</td>
-          <td class="paramname"><em>comp</em>, </td>
+          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::optional&lt; quill::Logger * &gt;&#160;</td>
-          <td class="paramname"><em>logger</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::optional&lt; quill::Logger * &gt;</td>          <td class="paramname"><span class="paramname"><em>logger</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -985,27 +957,19 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a> gridfire::engine::regularize_jacobian </td>
+          <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> gridfire::engine::regularize_jacobian </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a> &amp;&#160;</td>
-          <td class="paramname"><em>jacobian</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>jacobian</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;&#160;</td>
-          <td class="paramname"><em>comp</em>, </td>
+          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">std::optional&lt; quill::Logger * &gt;&#160;</td>
-          <td class="paramname"><em>logger</em> = <code>std::nullopt</code>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">std::optional&lt; quill::Logger * &gt;</td>          <td class="paramname"><span class="paramname"><em>logger</em></span><span class="paramdefsep"> = </span><span class="paramdefval">std::nullopt</span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -1014,13 +978,13 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
 <p>This function applies regularization techniques to the Jacobian matrix to improve its numerical stability. Specifically any (row, column) entries corresponding to species who's abundance is below a threshold of MIN_ABUNDANCE_TO_CONTRIBUTE_TO_JACOBIAN in the provided composition will be set to zero if those entries were either infinite or NaN.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">jacobian</td><td>The <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html" title="A wrapper class for handling the network Jacobian matrix.">NetworkJacobian</a> to be regularized. </td></tr>
+    <tr><td class="paramname">jacobian</td><td>The <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html" title="A wrapper class for handling the network Jacobian matrix.">NetworkJacobian</a> to be regularized. </td></tr>
     <tr><td class="paramname">comp</td><td>The composition used for regularization. </td></tr>
     <tr><td class="paramname">logger</td><td>Optional logger for logging regularization steps and information. </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd>A new <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html" title="A wrapper class for handling the network Jacobian matrix.">NetworkJacobian</a> instance representing the regularized Jacobian matrix. </dd></dl>
+<dl class="section return"><dt>Returns</dt><dd>A new <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html" title="A wrapper class for handling the network Jacobian matrix.">NetworkJacobian</a> instance representing the regularized Jacobian matrix. </dd></dl>
 
 </div>
 </div>
@@ -1036,26 +1000,25 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
         <tr>
           <td class="memname">std::string gridfire::engine::SpeciesStatus_to_string </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1engine.html#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a>&#160;</td>
-          <td class="paramname"><em>status</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3">SpeciesStatus</a></td>          <td class="paramname"><span class="paramname"><em>status</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Convert a SpeciesStatus enum value to its string representation. </p>
+<p>Convert a <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a> enum value to its string representation. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">status</td><td>The SpeciesStatus value to convert. </td></tr>
+    <tr><td class="paramname">status</td><td>The <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a> value to convert. </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd>A string representing the SpeciesStatus. </dd></dl>
+<dl class="section return"><dt>Returns</dt><dd>A string representing the <a class="el" href="#a83c9d755597668bba3cf00cd0ea10ee3" title="Enumerates the status of a species in the simulation.">SpeciesStatus</a>. </dd></dl>
 
 </div>
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@@ -1069,25 +1032,24 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr auto gridfire::engine::to_underlying </td>
+          <td class="memname">auto gridfire::engine::to_underlying </td>
           <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine.html#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a>&#160;</td>
-          <td class="paramname"><em>f</em></td><td>)</td>
+          <td class="paramtype"><a class="el" href="#a775506bb881280f73264db27cb8388f9">NetworkConstructionFlags</a></td>          <td class="paramname"><span class="paramname"><em>f</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">constexpr</span><span class="mlabel">noexcept</span></span>  </td>
+<span class="mlabels"><span class="mlabel constexpr">constexpr</span><span class="mlabel noexcept">noexcept</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Helper function to convert NetworkConstructionFlags to their underlying integer type. </p>
-<p>This function facilitates bitwise operations on NetworkConstructionFlags by converting them to their underlying integer representation.</p>
+<p>Helper function to convert <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> to their underlying integer type. </p>
+<p>This function facilitates bitwise operations on <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> by converting them to their underlying integer representation.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">f</td><td>The NetworkConstructionFlags value to convert. </td></tr>
+    <tr><td class="paramname">f</td><td>The <a class="el" href="#a775506bb881280f73264db27cb8388f9" title="Flags to specify which types of nuclear reactions to include when constructing a reaction network.">NetworkConstructionFlags</a> value to convert. </td></tr>
   </table>
   </dd>
 </dl>
@@ -1106,12 +1068,12 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr double gridfire::engine::MIN_ABUNDANCE_THRESHOLD = 1e-18</td>
+          <td class="memname">double gridfire::engine::MIN_ABUNDANCE_THRESHOLD = 1e-18</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">static</span><span class="mlabel">constexpr</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -1131,12 +1093,12 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr double gridfire::engine::MIN_ABUNDANCE_TO_CONTRIBUTE_TO_JACOBIAN = 1e-100</td>
+          <td class="memname">double gridfire::engine::MIN_ABUNDANCE_TO_CONTRIBUTE_TO_JACOBIAN = 1e-100</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">constexpr</span></span>  </td>
+<span class="mlabels"><span class="mlabel constexpr">constexpr</span></span>  </td>
   </tr>
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@@ -1155,12 +1117,12 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr double gridfire::engine::MIN_DENSITY_THRESHOLD = 1e-18</td>
+          <td class="memname">double gridfire::engine::MIN_DENSITY_THRESHOLD = 1e-18</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">static</span><span class="mlabel">constexpr</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -1180,12 +1142,12 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr double gridfire::engine::MIN_JACOBIAN_THRESHOLD = 1e-24</td>
+          <td class="memname">double gridfire::engine::MIN_JACOBIAN_THRESHOLD = 1e-24</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">static</span><span class="mlabel">constexpr</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -1205,23 +1167,26 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">std::map&lt;<a class="el" href="namespacegridfire_1_1engine.html#ada706e6a92b733f6be85aa4425b135c1">PrimingReportStatus</a>, std::string&gt; gridfire::engine::PrimingReportStatusStrings</td>
+          <td class="memname">std::map&lt;<a class="el" href="#ada706e6a92b733f6be85aa4425b135c1">PrimingReportStatus</a>, std::string&gt; gridfire::engine::PrimingReportStatusStrings</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 <b>Initial value:</b><div class="fragment"><div class="line">= {</div>
-<div class="line">        {PrimingReportStatus::SUCCESS, <span class="stringliteral">&quot;SUCCESS&quot;</span>},</div>
-<div class="line">        {PrimingReportStatus::SOLVER_FAILURE, <span class="stringliteral">&quot;SOLVER_FAILURE&quot;</span>},</div>
-<div class="line">        {PrimingReportStatus::ALREADY_PRIMED, <span class="stringliteral">&quot;ALREADY_PRIMED&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#ada706e6a92b733f6be85aa4425b135c1ad0749aaba8b833466dfcbb0428e4f89c">PrimingReportStatus::SUCCESS</a>, <span class="stringliteral">&quot;SUCCESS&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#ada706e6a92b733f6be85aa4425b135c1afae3583994fb36fc9a5efcfe0a9b35c9">PrimingReportStatus::SOLVER_FAILURE</a>, <span class="stringliteral">&quot;SOLVER_FAILURE&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#ada706e6a92b733f6be85aa4425b135c1aa79c9fd21a71b9db74af815d8fed8397">PrimingReportStatus::ALREADY_PRIMED</a>, <span class="stringliteral">&quot;ALREADY_PRIMED&quot;</span>},</div>
 <div class="line">    }</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html_ada706e6a92b733f6be85aa4425b135c1aa79c9fd21a71b9db74af815d8fed8397"><div class="ttname"><a href="#ada706e6a92b733f6be85aa4425b135c1aa79c9fd21a71b9db74af815d8fed8397">gridfire::engine::PrimingReportStatus::ALREADY_PRIMED</a></div><div class="ttdeci">@ ALREADY_PRIMED</div><div class="ttdef"><b>Definition</b> reporting.h:28</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html_ada706e6a92b733f6be85aa4425b135c1ad0749aaba8b833466dfcbb0428e4f89c"><div class="ttname"><a href="#ada706e6a92b733f6be85aa4425b135c1ad0749aaba8b833466dfcbb0428e4f89c">gridfire::engine::PrimingReportStatus::SUCCESS</a></div><div class="ttdeci">@ SUCCESS</div><div class="ttdef"><b>Definition</b> reporting.h:27</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html_ada706e6a92b733f6be85aa4425b135c1afae3583994fb36fc9a5efcfe0a9b35c9"><div class="ttname"><a href="#ada706e6a92b733f6be85aa4425b135c1afae3583994fb36fc9a5efcfe0a9b35c9">gridfire::engine::PrimingReportStatus::SOLVER_FAILURE</a></div><div class="ttdeci">@ SOLVER_FAILURE</div><div class="ttdef"><b>Definition</b> reporting.h:29</div></div>
 </div><!-- fragment -->
-<p>Mapping from PrimingReportStatus codes to human-readable strings. </p>
-<p>Used when formatting or logging the priming status. No preconditions. The map contains entries for all PrimingReportStatus values. </p>
+<p>Mapping from <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1" title="Enumerates outcome codes for a network priming operation.">PrimingReportStatus</a> codes to human-readable strings. </p>
+<p>Used when formatting or logging the priming status. No preconditions. The map contains entries for all <a class="el" href="#ada706e6a92b733f6be85aa4425b135c1" title="Enumerates outcome codes for a network priming operation.">PrimingReportStatus</a> values. </p>
 
 </div>
 </div>
@@ -1231,7 +1196,7 @@ Resolved integer depth from maxLayers must not be zero. </dd></dl>
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
     <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine.html">engine</a></li>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/namespacegridfire_1_1engine.js b/docs/html/namespacegridfire_1_1engine.js
index c6beffde..ab159f95 100644
--- a/docs/html/namespacegridfire_1_1engine.js
+++ b/docs/html/namespacegridfire_1_1engine.js
@@ -1,29 +1,32 @@
 var namespacegridfire_1_1engine =
 [
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-      [ "inspect_jacobian_stiffness", "namespacegridfire_1_1engine_1_1diagnostics.html#a8a42702b787f12988ae8fc7e1e6d8186", null ],
-      [ "inspect_species_balance", "namespacegridfire_1_1engine_1_1diagnostics.html#aac2570f6bc58b8825674f60f1634149b", null ],
-      [ "report_limiting_species", "namespacegridfire_1_1engine_1_1diagnostics.html#ad792baf3c6720fce34a5161c0ade3fc4", null ],
+      [ "inspect_jacobian_stiffness", "namespacegridfire_1_1engine_1_1diagnostics.html#a08e04c4687a664fe359bb23a927cdd08", null ],
+      [ "inspect_species_balance", "namespacegridfire_1_1engine_1_1diagnostics.html#a2cfc177bd9ce02c82ca74e7157920a9f", null ],
+      [ "report_limiting_species", "namespacegridfire_1_1engine_1_1diagnostics.html#a2b0b9806c3825d2cc8d68c94a63ca1c6", null ],
       [ "save_jacobian_to_file", "namespacegridfire_1_1engine_1_1diagnostics.html#ab247fdf00c23cf857d9131a3462d41ae", null ]
     ] ],
-    [ "AdaptiveEngineView", "classgridfire_1_1engine_1_1AdaptiveEngineView.html", "classgridfire_1_1engine_1_1AdaptiveEngineView" ],
-    [ "DefinedEngineView", "classgridfire_1_1engine_1_1DefinedEngineView.html", "classgridfire_1_1engine_1_1DefinedEngineView" ],
-    [ "DynamicEngine", "classgridfire_1_1engine_1_1DynamicEngine.html", "classgridfire_1_1engine_1_1DynamicEngine" ],
-    [ "EnergyDerivatives", "structgridfire_1_1engine_1_1EnergyDerivatives.html", "structgridfire_1_1engine_1_1EnergyDerivatives" ],
-    [ "Engine", "classgridfire_1_1engine_1_1Engine.html", "classgridfire_1_1engine_1_1Engine" ],
-    [ "EngineView", "classgridfire_1_1engine_1_1EngineView.html", "classgridfire_1_1engine_1_1EngineView" ],
-    [ "FileDefinedEngineView", "classgridfire_1_1engine_1_1FileDefinedEngineView.html", "classgridfire_1_1engine_1_1FileDefinedEngineView" ],
-    [ "GraphEngine", "classgridfire_1_1engine_1_1GraphEngine.html", "classgridfire_1_1engine_1_1GraphEngine" ],
-    [ "MultiscalePartitioningEngineView", "classgridfire_1_1engine_1_1MultiscalePartitioningEngineView.html", "classgridfire_1_1engine_1_1MultiscalePartitioningEngineView" ],
-    [ "NetworkJacobian", "classgridfire_1_1engine_1_1NetworkJacobian.html", "classgridfire_1_1engine_1_1NetworkJacobian" ],
-    [ "NetworkPrimingEngineView", "classgridfire_1_1engine_1_1NetworkPrimingEngineView.html", "classgridfire_1_1engine_1_1NetworkPrimingEngineView" ],
-    [ "PrimingReport", "structgridfire_1_1engine_1_1PrimingReport.html", "structgridfire_1_1engine_1_1PrimingReport" ],
-    [ "StepDerivatives", "structgridfire_1_1engine_1_1StepDerivatives.html", "structgridfire_1_1engine_1_1StepDerivatives" ],
-    [ "EngineType", "conceptgridfire_1_1engine_1_1EngineType.html", null ],
+    [ "scratch", "namespacegridfire_1_1engine_1_1scratch.html", "namespacegridfire_1_1engine_1_1scratch" ],
+    [ "AdaptiveEngineView", "classgridfire_1_1engine_1_1_adaptive_engine_view.html", "classgridfire_1_1engine_1_1_adaptive_engine_view" ],
+    [ "DefinedEngineView", "classgridfire_1_1engine_1_1_defined_engine_view.html", "classgridfire_1_1engine_1_1_defined_engine_view" ],
+    [ "DynamicEngine", "classgridfire_1_1engine_1_1_dynamic_engine.html", "classgridfire_1_1engine_1_1_dynamic_engine" ],
+    [ "EnergyDerivatives", "structgridfire_1_1engine_1_1_energy_derivatives.html", "structgridfire_1_1engine_1_1_energy_derivatives" ],
+    [ "Engine", "classgridfire_1_1engine_1_1_engine.html", "classgridfire_1_1engine_1_1_engine" ],
+    [ "EngineView", "classgridfire_1_1engine_1_1_engine_view.html", "classgridfire_1_1engine_1_1_engine_view" ],
+    [ "FileDefinedEngineView", "classgridfire_1_1engine_1_1_file_defined_engine_view.html", "classgridfire_1_1engine_1_1_file_defined_engine_view" ],
+    [ "GraphEngine", "classgridfire_1_1engine_1_1_graph_engine.html", "classgridfire_1_1engine_1_1_graph_engine" ],
+    [ "MultiscalePartitioningEngineView", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view.html", "classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view" ],
+    [ "NetworkJacobian", "classgridfire_1_1engine_1_1_network_jacobian.html", "classgridfire_1_1engine_1_1_network_jacobian" ],
+    [ "NetworkPrimingEngineView", "classgridfire_1_1engine_1_1_network_priming_engine_view.html", "classgridfire_1_1engine_1_1_network_priming_engine_view" ],
+    [ "PrimingReport", "structgridfire_1_1engine_1_1_priming_report.html", "structgridfire_1_1engine_1_1_priming_report" ],
+    [ "Reaction", "classgridfire_1_1engine_1_1_reaction.html", "classgridfire_1_1engine_1_1_reaction" ],
+    [ "ReactionSet", "classgridfire_1_1engine_1_1_reaction_set.html", "classgridfire_1_1engine_1_1_reaction_set" ],
+    [ "StepDerivatives", "structgridfire_1_1engine_1_1_step_derivatives.html", "structgridfire_1_1engine_1_1_step_derivatives" ],
+    [ "EngineType", "conceptgridfire_1_1engine_1_1_engine_type.html", null ],
     [ "ADDouble", "namespacegridfire_1_1engine.html#a4562b782e8096986a9b0cc95aa8c1c02", null ],
-    [ "BuildDepthType", "namespacegridfire_1_1engine.html#a540b6420c7b6271717ec9b640140f6c0", null ],
-    [ "JacobianEntry", "namespacegridfire_1_1engine.html#ac7974616b5fd465c4a42e3d882cdde6e", null ],
-    [ "SparsityPattern", "namespacegridfire_1_1engine.html#af5175018d2d1e78a8826dd33ec6d675f", null ],
+    [ "BuildDepthType", "namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b", null ],
+    [ "JacobianEntry", "namespacegridfire_1_1engine.html#aa7b127f4fe99188e3d94ff11608d54f0", null ],
+    [ "SparsityPattern", "namespacegridfire_1_1engine.html#a9de1791ec719c0a9b76b835703336870", null ],
     [ "EngineStatus", "namespacegridfire_1_1engine.html#a4d057e41b489bf20744dfa8d2958ad5a", [
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@@ -76,7 +79,7 @@ var namespacegridfire_1_1engine =
     [ "NetworkConstructionFlagsToString", "namespacegridfire_1_1engine.html#aea27cb9ed6d613ae9e4b7fa89767861a", null ],
     [ "operator&", "namespacegridfire_1_1engine.html#ace3a790fb57920fd12328fa9c5a3a1de", null ],
     [ "operator|", "namespacegridfire_1_1engine.html#a69216b717d99f53cf2d1419e23b69119", null ],
-    [ "primeNetwork", "namespacegridfire_1_1engine.html#aa6552165b4b36ea227479567880d8402", null ],
+    [ "primeNetwork", "namespacegridfire_1_1engine.html#a59778f067222e7c5e8932a7101b25807", null ],
     [ "regularize_jacobian", "namespacegridfire_1_1engine.html#a47e94047d095f3ce8a3b12836e23604c", null ],
     [ "regularize_jacobian", "namespacegridfire_1_1engine.html#afacda3b01618f041a81fa516547564fa", null ],
     [ "SpeciesStatus_to_string", "namespacegridfire_1_1engine.html#a6d1bd8b2b8161b50a260bf012c3f058f", null ],
diff --git a/docs/html/namespacegridfire_1_1engine_1_1diagnostics.html b/docs/html/namespacegridfire_1_1engine_1_1diagnostics.html
index 6812b06a..f8260cd5 100644
--- a/docs/html/namespacegridfire_1_1engine_1_1diagnostics.html
+++ b/docs/html/namespacegridfire_1_1engine_1_1diagnostics.html
@@ -3,16 +3,18 @@
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-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
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@@ -36,19 +38,24 @@
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 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
-<tr class="memitem:ad792baf3c6720fce34a5161c0ade3fc4" id="r_ad792baf3c6720fce34a5161c0ade3fc4"><td class="memItemLeft" align="right" valign="top">std::optional&lt; nlohmann::json &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1diagnostics.html#ad792baf3c6720fce34a5161c0ade3fc4">report_limiting_species</a> (const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">DynamicEngine</a> &amp;engine, const std::vector&lt; double &gt; &amp;Y_full, const std::vector&lt; double &gt; &amp;E_full, double relTol, double absTol, size_t top_n=10, bool json=false)</td></tr>
-<tr class="memdesc:ad792baf3c6720fce34a5161c0ade3fc4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Report the species that are limiting the accuracy of the integration. This is useful for identifying species that may be limiting the timestepping due to their high relative errors compared to the specified tolerances.  <br /></td></tr>
-<tr class="separator:ad792baf3c6720fce34a5161c0ade3fc4"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:aac2570f6bc58b8825674f60f1634149b" id="r_aac2570f6bc58b8825674f60f1634149b"><td class="memItemLeft" align="right" valign="top">std::optional&lt; nlohmann::json &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1diagnostics.html#aac2570f6bc58b8825674f60f1634149b">inspect_species_balance</a> (const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">DynamicEngine</a> &amp;engine, const std::string &amp;species_name, const fourdst::composition::Composition &amp;comp, double T9, double rho, bool json)</td></tr>
-<tr class="memdesc:aac2570f6bc58b8825674f60f1634149b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Inspect the production and destruction balance of a specific species in the reaction network. This function analyzes the reactions that create and destroy the specified species, providing insights into potential imbalances that may affect the accuracy of the simulation.  <br /></td></tr>
-<tr class="separator:aac2570f6bc58b8825674f60f1634149b"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a8a42702b787f12988ae8fc7e1e6d8186" id="r_a8a42702b787f12988ae8fc7e1e6d8186"><td class="memItemLeft" align="right" valign="top">std::optional&lt; nlohmann::json &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1diagnostics.html#a8a42702b787f12988ae8fc7e1e6d8186">inspect_jacobian_stiffness</a> (const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">DynamicEngine</a> &amp;engine, const fourdst::composition::Composition &amp;comp, double T9, double rho, bool json)</td></tr>
-<tr class="memdesc:a8a42702b787f12988ae8fc7e1e6d8186"><td class="mdescLeft">&#160;</td><td class="mdescRight">Inspect the stiffness of the Jacobian matrix for the reaction network at the given temperature and density. This function evaluates the diagonal and off-diagonal elements of the Jacobian to identify potential numerical issues related to stiffness.  <br /></td></tr>
-<tr class="separator:a8a42702b787f12988ae8fc7e1e6d8186"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ab247fdf00c23cf857d9131a3462d41ae" id="r_ab247fdf00c23cf857d9131a3462d41ae"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1diagnostics.html#ab247fdf00c23cf857d9131a3462d41ae">save_jacobian_to_file</a> (const <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a> &amp;jacobian, const std::string &amp;filename)</td></tr>
+<tr class="memitem:a2b0b9806c3825d2cc8d68c94a63ca1c6" id="r_a2b0b9806c3825d2cc8d68c94a63ca1c6"><td class="memItemLeft" align="right" valign="top">std::optional&lt; nlohmann::json &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2b0b9806c3825d2cc8d68c94a63ca1c6">report_limiting_species</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;engine, const std::vector&lt; double &gt; &amp;Y_full, const std::vector&lt; double &gt; &amp;E_full, double relTol, double absTol, size_t top_n=10, bool json=false)</td></tr>
+<tr class="memdesc:a2b0b9806c3825d2cc8d68c94a63ca1c6"><td class="mdescLeft">&#160;</td><td class="mdescRight">Report the species that are limiting the accuracy of the integration. This is useful for identifying species that may be limiting the timestepping due to their high relative errors compared to the specified tolerances.  <br /></td></tr>
+<tr class="separator:a2b0b9806c3825d2cc8d68c94a63ca1c6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2cfc177bd9ce02c82ca74e7157920a9f" id="r_a2cfc177bd9ce02c82ca74e7157920a9f"><td class="memItemLeft" align="right" valign="top">std::optional&lt; nlohmann::json &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2cfc177bd9ce02c82ca74e7157920a9f">inspect_species_balance</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;engine, const std::string &amp;species_name, const fourdst::composition::Composition &amp;comp, double T9, double rho, bool json)</td></tr>
+<tr class="memdesc:a2cfc177bd9ce02c82ca74e7157920a9f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Inspect the production and destruction balance of a specific species in the reaction network. This function analyzes the reactions that create and destroy the specified species, providing insights into potential imbalances that may affect the accuracy of the simulation.  <br /></td></tr>
+<tr class="separator:a2cfc177bd9ce02c82ca74e7157920a9f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a08e04c4687a664fe359bb23a927cdd08" id="r_a08e04c4687a664fe359bb23a927cdd08"><td class="memItemLeft" align="right" valign="top">std::optional&lt; nlohmann::json &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a08e04c4687a664fe359bb23a927cdd08">inspect_jacobian_stiffness</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;ctx, const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;engine, const fourdst::composition::Composition &amp;comp, double T9, double rho, bool json)</td></tr>
+<tr class="memdesc:a08e04c4687a664fe359bb23a927cdd08"><td class="mdescLeft">&#160;</td><td class="mdescRight">Inspect the stiffness of the Jacobian matrix for the reaction network at the given temperature and density. This function evaluates the diagonal and off-diagonal elements of the Jacobian to identify potential numerical issues related to stiffness.  <br /></td></tr>
+<tr class="separator:a08e04c4687a664fe359bb23a927cdd08"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab247fdf00c23cf857d9131a3462d41ae" id="r_ab247fdf00c23cf857d9131a3462d41ae"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab247fdf00c23cf857d9131a3462d41ae">save_jacobian_to_file</a> (const <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> &amp;jacobian, const std::string &amp;filename)</td></tr>
 <tr class="memdesc:ab247fdf00c23cf857d9131a3462d41ae"><td class="mdescLeft">&#160;</td><td class="mdescRight">Save the Jacobian matrix to a file for external analysis.  <br /></td></tr>
 <tr class="separator:ab247fdf00c23cf857d9131a3462d41ae"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Function Documentation</h2>
-<a id="a8a42702b787f12988ae8fc7e1e6d8186" name="a8a42702b787f12988ae8fc7e1e6d8186"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a8a42702b787f12988ae8fc7e1e6d8186">&#9670;&#160;</a></span>inspect_jacobian_stiffness()</h2>
+<a id="a08e04c4687a664fe359bb23a927cdd08" name="a08e04c4687a664fe359bb23a927cdd08"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a08e04c4687a664fe359bb23a927cdd08">&#9670;&#160;</a></span>inspect_jacobian_stiffness()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -123,37 +130,32 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">std::optional&lt; nlohmann::json &gt; gridfire::engine::diagnostics::inspect_jacobian_stiffness </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">DynamicEngine</a> &amp;&#160;</td>
-          <td class="paramname"><em>engine</em>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const fourdst::composition::Composition &amp;&#160;</td>
-          <td class="paramname"><em>comp</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>T9</em>, </td>
+          <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>rho</em>, </td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">bool&#160;</td>
-          <td class="paramname"><em>json</em>&#160;</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>json</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -161,7 +163,7 @@ Functions</h2></td></tr>
 <p>Inspect the stiffness of the Jacobian matrix for the reaction network at the given temperature and density. This function evaluates the diagonal and off-diagonal elements of the Jacobian to identify potential numerical issues related to stiffness. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">engine</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> instance. </td></tr>
+    <tr><td class="paramname">engine</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> instance. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system as a fourdst::composition::Composition object. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in GK (10^9 K). </td></tr>
     <tr><td class="paramname">rho</td><td>The density in g/cm^3. </td></tr>
@@ -173,8 +175,8 @@ Functions</h2></td></tr>
 
 </div>
 </div>
-<a id="aac2570f6bc58b8825674f60f1634149b" name="aac2570f6bc58b8825674f60f1634149b"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aac2570f6bc58b8825674f60f1634149b">&#9670;&#160;</a></span>inspect_species_balance()</h2>
+<a id="a2cfc177bd9ce02c82ca74e7157920a9f" name="a2cfc177bd9ce02c82ca74e7157920a9f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2cfc177bd9ce02c82ca74e7157920a9f">&#9670;&#160;</a></span>inspect_species_balance()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -182,43 +184,37 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">std::optional&lt; nlohmann::json &gt; gridfire::engine::diagnostics::inspect_species_balance </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">DynamicEngine</a> &amp;&#160;</td>
-          <td class="paramname"><em>engine</em>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>species_name</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const fourdst::composition::Composition &amp;&#160;</td>
-          <td class="paramname"><em>comp</em>, </td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>species_name</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>T9</em>, </td>
+          <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>rho</em>, </td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">bool&#160;</td>
-          <td class="paramname"><em>json</em>&#160;</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>json</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -226,7 +222,7 @@ Functions</h2></td></tr>
 <p>Inspect the production and destruction balance of a specific species in the reaction network. This function analyzes the reactions that create and destroy the specified species, providing insights into potential imbalances that may affect the accuracy of the simulation. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">engine</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> instance. </td></tr>
+    <tr><td class="paramname">engine</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> instance. </td></tr>
     <tr><td class="paramname">species_name</td><td>The name of the species to inspect. </td></tr>
     <tr><td class="paramname">comp</td><td>The current composition of the system as a fourdst::composition::Composition object. </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in GK (10^9 K). </td></tr>
@@ -239,8 +235,8 @@ Functions</h2></td></tr>
 
 </div>
 </div>
-<a id="ad792baf3c6720fce34a5161c0ade3fc4" name="ad792baf3c6720fce34a5161c0ade3fc4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ad792baf3c6720fce34a5161c0ade3fc4">&#9670;&#160;</a></span>report_limiting_species()</h2>
+<a id="a2b0b9806c3825d2cc8d68c94a63ca1c6" name="a2b0b9806c3825d2cc8d68c94a63ca1c6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2b0b9806c3825d2cc8d68c94a63ca1c6">&#9670;&#160;</a></span>report_limiting_species()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -248,49 +244,42 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">std::optional&lt; nlohmann::json &gt; gridfire::engine::diagnostics::report_limiting_species </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">DynamicEngine</a> &amp;&#160;</td>
-          <td class="paramname"><em>engine</em>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::vector&lt; double &gt; &amp;&#160;</td>
-          <td class="paramname"><em>Y_full</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::vector&lt; double &gt; &amp;&#160;</td>
-          <td class="paramname"><em>E_full</em>, </td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>Y_full</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>relTol</em>, </td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>E_full</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>absTol</em>, </td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>relTol</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">size_t&#160;</td>
-          <td class="paramname"><em>top_n</em> = <code>10</code>, </td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>absTol</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">bool&#160;</td>
-          <td class="paramname"><em>json</em> = <code>false</code>&#160;</td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>top_n</em></span><span class="paramdefsep"> = </span><span class="paramdefval">10</span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>json</em></span><span class="paramdefsep"> = </span><span class="paramdefval">false</span>&#160;)</td>
         </tr>
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 </div><div class="memdoc">
@@ -298,7 +287,7 @@ Functions</h2></td></tr>
 <p>Report the species that are limiting the accuracy of the integration. This is useful for identifying species that may be limiting the timestepping due to their high relative errors compared to the specified tolerances. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">engine</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> instance. </td></tr>
+    <tr><td class="paramname">engine</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> instance. </td></tr>
     <tr><td class="paramname">Y_full</td><td>Vector of the current species molar abundances sorted in the same order as the dynamic engine species list. </td></tr>
     <tr><td class="paramname">E_full</td><td>Vector of the current species molar abundance errors sorted in the same order as the dynamic engine species list. </td></tr>
     <tr><td class="paramname">relTol</td><td>Relative tolerance for the integration. </td></tr>
@@ -321,19 +310,12 @@ Functions</h2></td></tr>
         <tr>
           <td class="memname">void gridfire::engine::diagnostics::save_jacobian_to_file </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html">NetworkJacobian</a> &amp;&#160;</td>
-          <td class="paramname"><em>jacobian</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html">NetworkJacobian</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>jacobian</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>filename</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -341,7 +323,7 @@ Functions</h2></td></tr>
 <p>Save the Jacobian matrix to a file for external analysis. </p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">jacobian</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html" title="A wrapper class for handling the network Jacobian matrix.">NetworkJacobian</a> instance to be saved. </td></tr>
+    <tr><td class="paramname">jacobian</td><td>Constant reference to the <a class="el" href="classgridfire_1_1engine_1_1_network_jacobian.html" title="A wrapper class for handling the network Jacobian matrix.">NetworkJacobian</a> instance to be saved. </td></tr>
     <tr><td class="paramname">filename</td><td>The name of the file where the Jacobian will be saved. </td></tr>
   </table>
   </dd>
@@ -355,7 +337,7 @@ Functions</h2></td></tr>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#nested-classes">Classes</a> &#124;
+<a href="#concepts">Concepts</a> &#124;
+<a href="#enum-members">Enumerations</a> &#124;
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::scratch Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad memory management for computational engines.  
+<a href="#details">More...</a></p>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
+Classes</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract base struct for engine scratchpad memory.  <a href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">AdaptiveEngineViewScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for storing working memory used by <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> computations.  <a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">DefinedEngineViewScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for storing working memory used by defined reaction network engines.  <a href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for storing CppAD automatic differentiation state for <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a>.  <a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">MultiscalePartitioningEngineViewScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad for multiscale partitioning engine computations with QSE groups.  <a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Container for managing a collection of typed scratchpad instances.  <a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="concepts" name="concepts"></a>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">concept &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html">IsScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Concept that constrains types to valid scratchpad implementations. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="enum-members" name="enum-members"></a>
+Enumerations</h2></td></tr>
+<tr class="memitem:a61cbbc8ec7103cc74fc8e549fd0649be" id="r_a61cbbc8ec7103cc74fc8e549fd0649be"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> : uint8_t { <br />
+&#160;&#160;<a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">GRAPH_ENGINE_SCRATCHPAD</a>
+, <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649bea04752870c6cbdf741856f817d68f80bc">MULTISCALE_PARTITIONING_ENGINE_VIEW_SCRATCHPAD</a>
+, <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649bea7ea429f895ad8257bbf75dc52312d999">ADAPTIVE_ENGINE_VIEW_SCRATCHPAD</a>
+, <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649bead249b18ecc73b7531c3b609272989f04">DEFINED_ENGINE_VIEW_SCRATCHPAD</a>
+, <br />
+&#160;&#160;<a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649bea051914b0c2bbfe353fa2621902e0a84a">PRIMING_ENGINE_VIEW_SCRATCHPAD</a>
+, <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103">_COUNT</a>
+<br />
+ }</td></tr>
+<tr class="memdesc:a61cbbc8ec7103cc74fc8e549fd0649be"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumeration of all registered scratchpad types.  <a href="#a61cbbc8ec7103cc74fc8e549fd0649be">More...</a><br /></td></tr>
+<tr class="separator:a61cbbc8ec7103cc74fc8e549fd0649be"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a7fa4b4931eb98910018ecb9e6d37a778" id="r_a7fa4b4931eb98910018ecb9e6d37a778"><td class="memItemLeft" align="right" valign="top">consteval size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7fa4b4931eb98910018ecb9e6d37a778">get_max_scratchpad_types</a> ()</td></tr>
+<tr class="memdesc:a7fa4b4931eb98910018ecb9e6d37a778"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get the maximum number of scratchpad types at compile time.  <br /></td></tr>
+<tr class="separator:a7fa4b4931eb98910018ecb9e6d37a778"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aca27b37993186128808c8fdd96c54849" id="r_aca27b37993186128808c8fdd96c54849"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aca27b37993186128808c8fdd96c54849">get_scratchpad_type_name</a> (const <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> scratchpad_type)</td></tr>
+<tr class="memdesc:aca27b37993186128808c8fdd96c54849"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert a <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> to a human-readable name.  <br /></td></tr>
+<tr class="separator:aca27b37993186128808c8fdd96c54849"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab8f89f710094bfc93b84e26c818249b9" id="r_ab8f89f710094bfc93b84e26c818249b9"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX&gt; </td></tr>
+<tr class="memitem:ab8f89f710094bfc93b84e26c818249b9"><td class="memTemplItemLeft" align="right" valign="top">CTX *&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#ab8f89f710094bfc93b84e26c818249b9">get_state</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;ctx)</td></tr>
+<tr class="memdesc:ab8f89f710094bfc93b84e26c818249b9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a scratchpad from a <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>, throwing on error.  <br /></td></tr>
+<tr class="separator:ab8f89f710094bfc93b84e26c818249b9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a322cc33cefc958d2507229aa283e8d4e" id="r_a322cc33cefc958d2507229aa283e8d4e"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX&gt; </td></tr>
+<tr class="memitem:a322cc33cefc958d2507229aa283e8d4e"><td class="memTemplItemLeft" align="right" valign="top">const CTX *&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#a322cc33cefc958d2507229aa283e8d4e">get_state</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;ctx)</td></tr>
+<tr class="memdesc:a322cc33cefc958d2507229aa283e8d4e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a const scratchpad from a const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>, throwing on error.  <br /></td></tr>
+<tr class="separator:a322cc33cefc958d2507229aa283e8d4e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aeae70212ece1d604b41e434641bd4291" id="r_aeae70212ece1d604b41e434641bd4291"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </td></tr>
+<tr class="memitem:aeae70212ece1d604b41e434641bd4291"><td class="memTemplItemLeft" align="right" valign="top">CTX *&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#aeae70212ece1d604b41e434641bd4291">get_state</a> (<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;ctx)</td></tr>
+<tr class="memdesc:aeae70212ece1d604b41e434641bd4291"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a scratchpad with optional initialization check, throwing on error.  <br /></td></tr>
+<tr class="separator:aeae70212ece1d604b41e434641bd4291"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afd8f2cf5ed25a1c719ba1886836ff892" id="r_afd8f2cf5ed25a1c719ba1886836ff892"><td class="memTemplParams" colspan="2">template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </td></tr>
+<tr class="memitem:afd8f2cf5ed25a1c719ba1886836ff892"><td class="memTemplItemLeft" align="right" valign="top">const CTX *&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#afd8f2cf5ed25a1c719ba1886836ff892">get_state</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;ctx)</td></tr>
+<tr class="memdesc:afd8f2cf5ed25a1c719ba1886836ff892"><td class="mdescLeft">&#160;</td><td class="mdescRight">Retrieve a const scratchpad with optional initialization check, throwing on error.  <br /></td></tr>
+<tr class="separator:afd8f2cf5ed25a1c719ba1886836ff892"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad memory management for computational engines. </p>
+<p>The scratch namespace contains all components related to temporary working memory management for GridFire's computational engines. This includes the abstract scratchpad interface, concrete implementations for each engine type, the <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> container for managing multiple scratchpads, and utilities for convenient access.</p>
+<dl class="section user"><dt>Key Components</dt><dd><ul>
+<li><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html" title="Abstract base struct for engine scratchpad memory.">AbstractScratchPad</a>: Interface for all scratchpad types</li>
+<li><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html" title="Scratchpad for storing CppAD automatic differentiation state for GraphEngine.">GraphEngineScratchPad</a>: Working memory for CppAD-based graph engines</li>
+<li><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html" title="Scratchpad for storing working memory used by AdaptiveEngineView computations.">AdaptiveEngineViewScratchPad</a>: Storage for adaptive network computations</li>
+<li><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html" title="Scratchpad for storing working memory used by defined reaction network engines.">DefinedEngineViewScratchPad</a>: Storage for static network computations</li>
+<li><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html" title="Scratchpad for multiscale partitioning engine computations with QSE groups.">MultiscalePartitioningEngineViewScratchPad</a>: QSE solver state management</li>
+<li><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>: Type-safe container for multiple scratchpads</li>
+<li><a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a>: Enumeration of registered scratchpad types</li>
+<li><a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>: Concept constraining valid scratchpad types</li>
+<li><a class="el" href="#ab8f89f710094bfc93b84e26c818249b9" title="Retrieve a scratchpad from a StateBlob, throwing on error.">get_state()</a>: Utility functions for exception-based retrieval</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Design Philosophy</dt><dd>The scratchpad system follows these design principles:</dd></dl>
+<ol type="1">
+<li><b>Separation of Concerns</b>: Working memory is separate from engine configuration</li>
+<li><b>Type Safety</b>: Compile-time verification of scratchpad types via concepts</li>
+<li><b>Performance</b>: O(1) access via enum-indexed arrays</li>
+<li><b>Thread Locality</b>: Each thread owns its scratchpad instances</li>
+<li><b>Clonability</b>: Deep copying enables parallel execution patterns </li>
+</ol>
+</div><h2 class="groupheader">Enumeration Type Documentation</h2>
+<a id="a61cbbc8ec7103cc74fc8e549fd0649be" name="a61cbbc8ec7103cc74fc8e549fd0649be"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a61cbbc8ec7103cc74fc8e549fd0649be">&#9670;&#160;</a></span>ScratchPadType</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">enum class <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be">gridfire::engine::scratch::ScratchPadType</a> : uint8_t</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Enumeration of all registered scratchpad types. </p>
+<p>Each scratchpad implementation must have a unique type identifier in this enumeration. The concrete scratchpad class should define a static <code>ID</code> member initialized to its corresponding <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> value.</p>
+<dl class="section note"><dt>Note</dt><dd>The <code>_COUNT</code> enumerator is a sentinel value used to determine the total number of scratchpad types. It must always be the last entry. Do not use <code>_COUNT</code> as an actual scratchpad type. </dd></dl>
+<table class="fieldtable">
+<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723" name="a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723"></a>GRAPH_ENGINE_SCRATCHPAD&#160;</td><td class="fielddoc"><p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html" title="Scratchpad for storing CppAD automatic differentiation state for GraphEngine.">GraphEngineScratchPad</a> for CppAD-based engines. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a61cbbc8ec7103cc74fc8e549fd0649bea04752870c6cbdf741856f817d68f80bc" name="a61cbbc8ec7103cc74fc8e549fd0649bea04752870c6cbdf741856f817d68f80bc"></a>MULTISCALE_PARTITIONING_ENGINE_VIEW_SCRATCHPAD&#160;</td><td class="fielddoc"><p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html" title="Scratchpad for multiscale partitioning engine computations with QSE groups.">MultiscalePartitioningEngineViewScratchPad</a> for QSE partitioning. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a61cbbc8ec7103cc74fc8e549fd0649bea7ea429f895ad8257bbf75dc52312d999" name="a61cbbc8ec7103cc74fc8e549fd0649bea7ea429f895ad8257bbf75dc52312d999"></a>ADAPTIVE_ENGINE_VIEW_SCRATCHPAD&#160;</td><td class="fielddoc"><p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html" title="Scratchpad for storing working memory used by AdaptiveEngineView computations.">AdaptiveEngineViewScratchPad</a> for adaptive networks. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a61cbbc8ec7103cc74fc8e549fd0649bead249b18ecc73b7531c3b609272989f04" name="a61cbbc8ec7103cc74fc8e549fd0649bead249b18ecc73b7531c3b609272989f04"></a>DEFINED_ENGINE_VIEW_SCRATCHPAD&#160;</td><td class="fielddoc"><p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html" title="Scratchpad for storing working memory used by defined reaction network engines.">DefinedEngineViewScratchPad</a> for static networks. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a61cbbc8ec7103cc74fc8e549fd0649bea051914b0c2bbfe353fa2621902e0a84a" name="a61cbbc8ec7103cc74fc8e549fd0649bea051914b0c2bbfe353fa2621902e0a84a"></a>PRIMING_ENGINE_VIEW_SCRATCHPAD&#160;</td><td class="fielddoc"><p>PrimingEngineViewScratchPad for engine priming. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103" name="a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103"></a>_COUNT&#160;</td><td class="fielddoc"><p>Sentinel value representing the total number of scratchpad types. Do not use as a type. </p>
+</td></tr>
+</table>
+
+</div>
+</div>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a7fa4b4931eb98910018ecb9e6d37a778" name="a7fa4b4931eb98910018ecb9e6d37a778"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7fa4b4931eb98910018ecb9e6d37a778">&#9670;&#160;</a></span>get_max_scratchpad_types()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::engine::scratch::get_max_scratchpad_types </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel consteval">consteval</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Get the maximum number of scratchpad types at compile time. </p>
+<p>Returns the total count of registered scratchpad types, derived from the <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103" title="Sentinel value representing the total number of scratchpad types. Do not use as a type.">ScratchPadType::_COUNT</a> sentinel value. This is useful for sizing fixed-size arrays that need a slot for each scratchpad type.</p>
+<dl class="section return"><dt>Returns</dt><dd>The number of valid scratchpad types (excluding _COUNT).</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="comment">// Use at compile time for array sizing</span></div>
+<div class="line"><span class="keyword">constexpr</span> <span class="keywordtype">size_t</span> NUM_TYPES = <a class="code hl_function" href="#a7fa4b4931eb98910018ecb9e6d37a778">get_max_scratchpad_types</a>();</div>
+<div class="line">std::array&lt;std::unique_ptr&lt;AbstractScratchPad&gt;, NUM_TYPES&gt; scratchpads;</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Use in static_assert</span></div>
+<div class="line"><span class="keyword">static_assert</span>(<a class="code hl_function" href="#a7fa4b4931eb98910018ecb9e6d37a778">get_max_scratchpad_types</a>() &gt; 0, <span class="stringliteral">&quot;No scratchpad types defined&quot;</span>);</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a7fa4b4931eb98910018ecb9e6d37a778"><div class="ttname"><a href="#a7fa4b4931eb98910018ecb9e6d37a778">gridfire::engine::scratch::get_max_scratchpad_types</a></div><div class="ttdeci">consteval size_t get_max_scratchpad_types()</div><div class="ttdoc">Get the maximum number of scratchpad types at compile time.</div><div class="ttdef"><b>Definition</b> types.h:93</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="aca27b37993186128808c8fdd96c54849" name="aca27b37993186128808c8fdd96c54849"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aca27b37993186128808c8fdd96c54849">&#9670;&#160;</a></span>get_scratchpad_type_name()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::string_view gridfire::engine::scratch::get_scratchpad_type_name </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a></td>          <td class="paramname"><span class="paramname"><em>scratchpad_type</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel constexpr">constexpr</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Convert a <a class="el" href="#a61cbbc8ec7103cc74fc8e549fd0649be" title="Enumeration of all registered scratchpad types.">ScratchPadType</a> to a human-readable name. </p>
+<p>Returns a string view containing the class name associated with the given scratchpad type. Useful for logging, debugging, and error messages.</p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">scratchpad_type</td><td>The scratchpad type to convert.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>A string view containing the scratchpad class name, or "UnknownScratchPadType" for unrecognized values.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_enumeration" href="#a61cbbc8ec7103cc74fc8e549fd0649be">ScratchPadType</a> type = <a class="code hl_enumvalue" href="#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a>;</div>
+<div class="line">std::cout &lt;&lt; <span class="stringliteral">&quot;Using: &quot;</span> &lt;&lt; <a class="code hl_function" href="#aca27b37993186128808c8fdd96c54849">get_scratchpad_type_name</a>(type) &lt;&lt; <span class="stringliteral">&quot;\n&quot;</span>;</div>
+<div class="line"><span class="comment">// Output: &quot;Using: GraphEngineScratchPad&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Use in error messages</span></div>
+<div class="line"><span class="keywordflow">throw</span> std::runtime_error(</div>
+<div class="line">    std::format(<span class="stringliteral">&quot;Failed to initialize {}&quot;</span>, <a class="code hl_function" href="#aca27b37993186128808c8fdd96c54849">get_scratchpad_type_name</a>(type))</div>
+<div class="line">);</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a61cbbc8ec7103cc74fc8e549fd0649be"><div class="ttname"><a href="#a61cbbc8ec7103cc74fc8e549fd0649be">gridfire::engine::scratch::ScratchPadType</a></div><div class="ttdeci">ScratchPadType</div><div class="ttdoc">Enumeration of all registered scratchpad types.</div><div class="ttdef"><b>Definition</b> types.h:64</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723"><div class="ttname"><a href="#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">gridfire::engine::scratch::ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a></div><div class="ttdeci">@ GRAPH_ENGINE_SCRATCHPAD</div><div class="ttdoc">GraphEngineScratchPad for CppAD-based engines.</div><div class="ttdef"><b>Definition</b> types.h:65</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_aca27b37993186128808c8fdd96c54849"><div class="ttname"><a href="#aca27b37993186128808c8fdd96c54849">gridfire::engine::scratch::get_scratchpad_type_name</a></div><div class="ttdeci">constexpr std::string_view get_scratchpad_type_name(const ScratchPadType scratchpad_type)</div><div class="ttdoc">Convert a ScratchPadType to a human-readable name.</div><div class="ttdef"><b>Definition</b> types.h:121</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="a322cc33cefc958d2507229aa283e8d4e" name="a322cc33cefc958d2507229aa283e8d4e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a322cc33cefc958d2507229aa283e8d4e">&#9670;&#160;</a></span>get_state() <span class="overload">[1/4]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX&gt; </div>
+      <table class="memname">
+        <tr>
+          <td class="memname">const CTX * gridfire::engine::scratch::get_state </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Retrieve a const scratchpad from a const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>, throwing on error. </p>
+<p>Const-correct overload of <a class="el" href="#ab8f89f710094bfc93b84e26c818249b9" title="Retrieve a scratchpad from a StateBlob, throwing on error.">get_state()</a> for read-only access to scratchpads. Use this when you have a const reference to the <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> and only need to read from the scratchpad.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to retrieve (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>).</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>The const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> to retrieve the scratchpad from.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>Const pointer to the requested scratchpad.</dd></dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname"><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">exceptions::ScratchPadError</a></td><td>if the scratchpad is not found, cannot be cast to the requested type, or any other error occurs.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keywordtype">void</span> inspect(<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a>&amp; blob) {</div>
+<div class="line">    <span class="keyword">const</span> <a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = <a class="code hl_function" href="#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad&gt;</a>(blob);</div>
+<div class="line">    <span class="keywordflow">if</span> (<a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;is_initialized()) {</div>
+<div class="line">        <span class="comment">// Read from scratch...</span></div>
+<div class="line">    }</div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></div><div class="ttdoc">Container for managing a collection of typed scratchpad instances.</div><div class="ttdef"><b>Definition</b> blob.h:114</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_ab8f89f710094bfc93b84e26c818249b9"><div class="ttname"><a href="#ab8f89f710094bfc93b84e26c818249b9">gridfire::engine::scratch::get_state</a></div><div class="ttdeci">CTX * get_state(StateBlob &amp;ctx)</div><div class="ttdoc">Retrieve a scratchpad from a StateBlob, throwing on error.</div><div class="ttdef"><b>Definition</b> utils.h:84</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></div><div class="ttdoc">Scratchpad for storing CppAD automatic differentiation state for GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:83</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="afd8f2cf5ed25a1c719ba1886836ff892" name="afd8f2cf5ed25a1c719ba1886836ff892"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afd8f2cf5ed25a1c719ba1886836ff892">&#9670;&#160;</a></span>get_state() <span class="overload">[2/4]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </div>
+      <table class="memname">
+        <tr>
+          <td class="memname">const CTX * gridfire::engine::scratch::get_state </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Retrieve a const scratchpad with optional initialization check, throwing on error. </p>
+<p>Const-correct overload of the initialization-checking <a class="el" href="#ab8f89f710094bfc93b84e26c818249b9" title="Retrieve a scratchpad from a StateBlob, throwing on error.">get_state()</a>. Combines read-only access with optional initialization verification.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to retrieve (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>). </td></tr>
+    <tr><td class="paramname">MUST_BE_INITIALIZED</td><td>If true, throws when the scratchpad is not initialized.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>The const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> to retrieve the scratchpad from.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>Const pointer to the requested scratchpad (guaranteed initialized if MUST_BE_INITIALIZED is true).</dd></dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname"><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">exceptions::ScratchPadError</a></td><td>if the scratchpad is not found, cannot be cast, is not initialized (when required), or any other error.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keywordtype">void</span> validate(<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a>&amp; blob) {</div>
+<div class="line">    <span class="comment">// Get const access, ensuring initialization</span></div>
+<div class="line">    <span class="keyword">const</span> <span class="keyword">auto</span>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = <a class="code hl_function" href="#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad, true&gt;</a>(blob);</div>
+<div class="line">    <span class="comment">// Safe to read - guaranteed initialized</span></div>
+<div class="line">    <span class="keyword">const</span> <span class="keyword">auto</span>&amp; adfun = <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;rhsADFun.value();</div>
+<div class="line">}</div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="ab8f89f710094bfc93b84e26c818249b9" name="ab8f89f710094bfc93b84e26c818249b9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab8f89f710094bfc93b84e26c818249b9">&#9670;&#160;</a></span>get_state() <span class="overload">[3/4]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX&gt; </div>
+      <table class="memname">
+        <tr>
+          <td class="memname">CTX * gridfire::engine::scratch::get_state </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Retrieve a scratchpad from a <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a>, throwing on error. </p>
+<p>Convenience wrapper around <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#acedd28277e5c6805865a9baa3991686a" title="Retrieve a scratchpad by type.">StateBlob::get()</a> that converts error codes into exceptions. Use this when you expect the scratchpad to exist and want exception-based error handling.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to retrieve (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>).</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>The <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> to retrieve the scratchpad from.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>Pointer to the requested scratchpad.</dd></dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname"><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">exceptions::ScratchPadError</a></td><td>if the scratchpad is not found, cannot be cast to the requested type, or any other error occurs.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> blob;</div>
+<div class="line">blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Retrieve the scratchpad - throws if not enrolled</span></div>
+<div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = <a class="code hl_function" href="#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad&gt;</a>(blob);</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aa06d7bb89e67c4b6fd584d8f32a251bf"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">gridfire::engine::scratch::StateBlob::enroll</a></div><div class="ttdeci">void enroll()</div><div class="ttdoc">Enroll a new scratchpad type into the blob.</div><div class="ttdef"><b>Definition</b> blob.h:196</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="aeae70212ece1d604b41e434641bd4291" name="aeae70212ece1d604b41e434641bd4291"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aeae70212ece1d604b41e434641bd4291">&#9670;&#160;</a></span>get_state() <span class="overload">[4/4]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+<div class="memtemplate">
+template&lt;IsScratchPad CTX, bool MUST_BE_INITIALIZED&gt; </div>
+      <table class="memname">
+        <tr>
+          <td class="memname">CTX * gridfire::engine::scratch::get_state </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Retrieve a scratchpad with optional initialization check, throwing on error. </p>
+<p>Extended version of <a class="el" href="#ab8f89f710094bfc93b84e26c818249b9" title="Retrieve a scratchpad from a StateBlob, throwing on error.">get_state()</a> that can optionally verify the scratchpad is initialized before returning it. When MUST_BE_INITIALIZED is true, an exception is thrown if the scratchpad exists but hasn't been initialized.</p>
+<dl class="tparams"><dt>Template Parameters</dt><dd>
+  <table class="tparams">
+    <tr><td class="paramname">CTX</td><td>The scratchpad type to retrieve (must satisfy <a class="el" href="conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html" title="Concept that constrains types to valid scratchpad implementations.">IsScratchPad</a>). </td></tr>
+    <tr><td class="paramname">MUST_BE_INITIALIZED</td><td>If true, throws when the scratchpad is not initialized.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td>The <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html" title="Container for managing a collection of typed scratchpad instances.">StateBlob</a> to retrieve the scratchpad from.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns</dt><dd>Pointer to the requested scratchpad (guaranteed initialized if MUST_BE_INITIALIZED is true).</dd></dl>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname"><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">exceptions::ScratchPadError</a></td><td>if the scratchpad is not found, cannot be cast, is not initialized (when required), or any other error.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="comment">// Ensure scratchpad is initialized before use</span></div>
+<div class="line"><span class="keywordflow">try</span> {</div>
+<div class="line">    <span class="keyword">auto</span>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = <a class="code hl_function" href="#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad, true&gt;</a>(blob);</div>
+<div class="line">    <span class="comment">// Guaranteed to be initialized here</span></div>
+<div class="line">    use_scratchpad(*<a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>);</div>
+<div class="line">} <span class="keywordflow">catch</span> (<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">exceptions::ScratchPadError</a>&amp; e) {</div>
+<div class="line">    <span class="comment">// Handle missing or uninitialized scratchpad</span></div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1exceptions_1_1_scratch_pad_error_html"><div class="ttname"><a href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">gridfire::exceptions::ScratchPadError</a></div><div class="ttdef"><b>Definition</b> error_scratchpad.h:9</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine.html">engine</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/namespacegridfire_1_1engine_1_1scratch.js b/docs/html/namespacegridfire_1_1engine_1_1scratch.js
new file mode 100644
index 00000000..8348f371
--- /dev/null
+++ b/docs/html/namespacegridfire_1_1engine_1_1scratch.js
@@ -0,0 +1,24 @@
+var namespacegridfire_1_1engine_1_1scratch =
+[
+    [ "AbstractScratchPad", "structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html", "structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad" ],
+    [ "AdaptiveEngineViewScratchPad", "structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html", "structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad" ],
+    [ "DefinedEngineViewScratchPad", "structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html", "structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad" ],
+    [ "GraphEngineScratchPad", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad" ],
+    [ "MultiscalePartitioningEngineViewScratchPad", "structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html", "structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad" ],
+    [ "StateBlob", "classgridfire_1_1engine_1_1scratch_1_1_state_blob.html", "classgridfire_1_1engine_1_1scratch_1_1_state_blob" ],
+    [ "IsScratchPad", "conceptgridfire_1_1engine_1_1scratch_1_1_is_scratch_pad.html", null ],
+    [ "ScratchPadType", "namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be", [
+      [ "GRAPH_ENGINE_SCRATCHPAD", "namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723", null ],
+      [ "MULTISCALE_PARTITIONING_ENGINE_VIEW_SCRATCHPAD", "namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea04752870c6cbdf741856f817d68f80bc", null ],
+      [ "ADAPTIVE_ENGINE_VIEW_SCRATCHPAD", "namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea7ea429f895ad8257bbf75dc52312d999", null ],
+      [ "DEFINED_ENGINE_VIEW_SCRATCHPAD", "namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bead249b18ecc73b7531c3b609272989f04", null ],
+      [ "PRIMING_ENGINE_VIEW_SCRATCHPAD", "namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea051914b0c2bbfe353fa2621902e0a84a", null ],
+      [ "_COUNT", "namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649beaf3351ee60ccc810690817d90739bf103", null ]
+    ] ],
+    [ "get_max_scratchpad_types", "namespacegridfire_1_1engine_1_1scratch.html#a7fa4b4931eb98910018ecb9e6d37a778", null ],
+    [ "get_scratchpad_type_name", "namespacegridfire_1_1engine_1_1scratch.html#aca27b37993186128808c8fdd96c54849", null ],
+    [ "get_state", "namespacegridfire_1_1engine_1_1scratch.html#a322cc33cefc958d2507229aa283e8d4e", null ],
+    [ "get_state", "namespacegridfire_1_1engine_1_1scratch.html#afd8f2cf5ed25a1c719ba1886836ff892", null ],
+    [ "get_state", "namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9", null ],
+    [ "get_state", "namespacegridfire_1_1engine_1_1scratch.html#aeae70212ece1d604b41e434641bd4291", null ]
+];
\ No newline at end of file
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+<meta name="generator" content="Doxygen 1.13.2"/>
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
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+<!-- Generated by Doxygen 1.13.2 -->
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+<script type="text/javascript">
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@@ -99,101 +106,103 @@ $(document).ready(function(){initNavTree('namespacegridfire_1_1exceptions.html',
 <div class="contents">
 
 <p>Namespace for GridFire exception classes. All custom exceptions defined in GridFire inherit from std::exception and are organized within this namespace for clarity and modularity.  
-<a href="namespacegridfire_1_1exceptions.html#details">More...</a></p>
+<a href="#details">More...</a></p>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1BadCollectionError.html">BadCollectionError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for invalid composition collection in the engine.  <a href="classgridfire_1_1exceptions_1_1BadCollectionError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_bad_collection_error.html">BadCollectionError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for invalid composition collection in the engine.  <a href="classgridfire_1_1exceptions_1_1_bad_collection_error.html#details">More...</a><br /></td></tr>
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-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for errors in calculating the right-hand side (RHS).  <a href="classgridfire_1_1exceptions_1_1BadRHSEngineError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_bad_r_h_s_engine_error.html">BadRHSEngineError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for errors in calculating the right-hand side (RHS).  <a href="classgridfire_1_1exceptions_1_1_bad_r_h_s_engine_error.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_c_v_o_d_e_solver_failure_error.html">CVODESolverFailureError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for failures in the CVODE solver.  <a href="classgridfire_1_1exceptions_1_1_c_v_o_d_e_solver_failure_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1DebugException.html">DebugException</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception class for debug-only errors.  <a href="classgridfire_1_1exceptions_1_1DebugException.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_debug_exception.html">DebugException</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception class for debug-only errors.  <a href="classgridfire_1_1exceptions_1_1_debug_exception.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1EngineError.html">EngineError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for engine-related exceptions.  <a href="classgridfire_1_1exceptions_1_1EngineError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_engine_error.html">EngineError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for engine-related exceptions.  <a href="classgridfire_1_1exceptions_1_1_engine_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1FailedToPartitionEngineError.html">FailedToPartitionEngineError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for failures in partitioning the engine.  <a href="classgridfire_1_1exceptions_1_1FailedToPartitionEngineError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_failed_to_partition_engine_error.html">FailedToPartitionEngineError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for failures in partitioning the engine.  <a href="classgridfire_1_1exceptions_1_1_failed_to_partition_engine_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1GridFireError.html">GridFireError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for GridFire exceptions.  <a href="classgridfire_1_1exceptions_1_1GridFireError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_grid_fire_error.html">GridFireError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for GridFire exceptions.  <a href="classgridfire_1_1exceptions_1_1_grid_fire_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1HashingError.html">HashingError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception class for hashing-related errors in GridFire.  <a href="classgridfire_1_1exceptions_1_1HashingError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_hashing_error.html">HashingError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception class for hashing-related errors in GridFire.  <a href="classgridfire_1_1exceptions_1_1_hashing_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1IllConditionedJacobianError.html">IllConditionedJacobianError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when the Jacobian matrix is ill-conditioned.  <a href="classgridfire_1_1exceptions_1_1IllConditionedJacobianError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_ill_conditioned_jacobian_error.html">IllConditionedJacobianError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when the Jacobian matrix is ill-conditioned.  <a href="classgridfire_1_1exceptions_1_1_ill_conditioned_jacobian_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1InvalidQSESolutionError.html">InvalidQSESolutionError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for invalid QSE solution in the engine.  <a href="classgridfire_1_1exceptions_1_1InvalidQSESolutionError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_invalid_q_s_e_solution_error.html">InvalidQSESolutionError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for invalid QSE solution in the engine.  <a href="classgridfire_1_1exceptions_1_1_invalid_q_s_e_solution_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1JacobianError.html">JacobianError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for Jacobian-related exceptions.  <a href="classgridfire_1_1exceptions_1_1JacobianError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_jacobian_error.html">JacobianError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for Jacobian-related exceptions.  <a href="classgridfire_1_1exceptions_1_1_jacobian_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1KINSolSolverFailureError.html">KINSolSolverFailureError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for failures in the KINSOL solver.  <a href="classgridfire_1_1exceptions_1_1KINSolSolverFailureError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_k_i_n_sol_solver_failure_error.html">KINSolSolverFailureError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for failures in the KINSOL solver.  <a href="classgridfire_1_1exceptions_1_1_k_i_n_sol_solver_failure_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1MissingBaseReactionError.html">MissingBaseReactionError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when a required reaction is missing from the underlying database (e.g., REACLIB).  <a href="classgridfire_1_1exceptions_1_1MissingBaseReactionError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_missing_base_reaction_error.html">MissingBaseReactionError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when a required reaction is missing from the underlying database (e.g., REACLIB).  <a href="classgridfire_1_1exceptions_1_1_missing_base_reaction_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1MissingKeyReactionError.html">MissingKeyReactionError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when a constructed network fails to include a key reaction required by the policy.  <a href="classgridfire_1_1exceptions_1_1MissingKeyReactionError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_missing_key_reaction_error.html">MissingKeyReactionError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when a constructed network fails to include a key reaction required by the policy.  <a href="classgridfire_1_1exceptions_1_1_missing_key_reaction_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1MissingSeedSpeciesError.html">MissingSeedSpeciesError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when a required seed species is not found in the initial composition.  <a href="classgridfire_1_1exceptions_1_1MissingSeedSpeciesError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_missing_seed_species_error.html">MissingSeedSpeciesError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when a required seed species is not found in the initial composition.  <a href="classgridfire_1_1exceptions_1_1_missing_seed_species_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1NetworkResizedError.html">NetworkResizedError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for errors during network resizing.  <a href="classgridfire_1_1exceptions_1_1NetworkResizedError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_network_resized_error.html">NetworkResizedError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for errors during network resizing.  <a href="classgridfire_1_1exceptions_1_1_network_resized_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1PolicyError.html">PolicyError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for all exceptions related to network policy operations.  <a href="classgridfire_1_1exceptions_1_1PolicyError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_policy_error.html">PolicyError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for all exceptions related to network policy operations.  <a href="classgridfire_1_1exceptions_1_1_policy_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1ReactionError.html">ReactionError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for all exceptions related to reaction operations.  <a href="classgridfire_1_1exceptions_1_1ReactionError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_reaction_error.html">ReactionError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for all exceptions related to reaction operations.  <a href="classgridfire_1_1exceptions_1_1_reaction_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1ReactionParsingError.html">ReactionParsingError</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_reaction_parsing_error.html">ReactionParsingError</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1SingularJacobianError.html">SingularJacobianError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when the Jacobian matrix is singular.  <a href="classgridfire_1_1exceptions_1_1SingularJacobianError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_scratch_pad_error.html">ScratchPadError</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1SolverError.html">SolverError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for all exceptions related to solver operations.  <a href="classgridfire_1_1exceptions_1_1SolverError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_singular_jacobian_error.html">SingularJacobianError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception thrown when the Jacobian matrix is singular.  <a href="classgridfire_1_1exceptions_1_1_singular_jacobian_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1StaleJacobianError.html">StaleJacobianError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for stale Jacobian matrix access.  <a href="classgridfire_1_1exceptions_1_1StaleJacobianError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_solver_error.html">SolverError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for all exceptions related to solver operations.  <a href="classgridfire_1_1exceptions_1_1_solver_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1SUNDIALSError.html">SUNDIALSError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for exceptions related to SUNDIALS solver operations.  <a href="classgridfire_1_1exceptions_1_1SUNDIALSError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_stale_jacobian_error.html">StaleJacobianError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for stale Jacobian matrix access.  <a href="classgridfire_1_1exceptions_1_1_stale_jacobian_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1UnableToSetNetworkReactionsError.html">UnableToSetNetworkReactionsError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for failures in setting network reactions.  <a href="classgridfire_1_1exceptions_1_1UnableToSetNetworkReactionsError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_s_u_n_d_i_a_l_s_error.html">SUNDIALSError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for exceptions related to SUNDIALS solver operations.  <a href="classgridfire_1_1exceptions_1_1_s_u_n_d_i_a_l_s_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1UninitializedJacobianError.html">UninitializedJacobianError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for uninitialized Jacobian matrix access.  <a href="classgridfire_1_1exceptions_1_1UninitializedJacobianError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_unable_to_set_network_reactions_error.html">UnableToSetNetworkReactionsError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for failures in setting network reactions.  <a href="classgridfire_1_1exceptions_1_1_unable_to_set_network_reactions_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1UnknownJacobianError.html">UnknownJacobianError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for unknown Jacobian matrix access.  <a href="classgridfire_1_1exceptions_1_1UnknownJacobianError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_uninitialized_jacobian_error.html">UninitializedJacobianError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for uninitialized Jacobian matrix access.  <a href="classgridfire_1_1exceptions_1_1_uninitialized_jacobian_error.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1UtilityError.html">UtilityError</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for utility-related errors in GridFire.  <a href="classgridfire_1_1exceptions_1_1UtilityError.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_unknown_jacobian_error.html">UnknownJacobianError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exception for unknown Jacobian matrix access.  <a href="classgridfire_1_1exceptions_1_1_unknown_jacobian_error.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1exceptions_1_1_utility_error.html">UtilityError</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for utility-related errors in GridFire.  <a href="classgridfire_1_1exceptions_1_1_utility_error.html#details">More...</a><br /></td></tr>
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 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Namespace for GridFire exception classes. All custom exceptions defined in GridFire inherit from std::exception and are organized within this namespace for clarity and modularity. </p>
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+<p>All GridFire exception classes derive from std::exception and then from <a class="el" href="classgridfire_1_1exceptions_1_1_grid_fire_error.html" title="Base class for GridFire exceptions.">gridfire::exceptions::GridFireError</a>; </p>
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index 2e1f8903..37de14ed 100644
--- a/docs/html/namespacegridfire_1_1exceptions.js
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@@ -1,30 +1,31 @@
 var namespacegridfire_1_1exceptions =
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-    [ "BadCollectionError", "classgridfire_1_1exceptions_1_1BadCollectionError.html", null ],
-    [ "BadRHSEngineError", "classgridfire_1_1exceptions_1_1BadRHSEngineError.html", null ],
-    [ "CVODESolverFailureError", "classgridfire_1_1exceptions_1_1CVODESolverFailureError.html", null ],
-    [ "DebugException", "classgridfire_1_1exceptions_1_1DebugException.html", "classgridfire_1_1exceptions_1_1DebugException" ],
-    [ "EngineError", "classgridfire_1_1exceptions_1_1EngineError.html", "classgridfire_1_1exceptions_1_1EngineError" ],
-    [ "FailedToPartitionEngineError", "classgridfire_1_1exceptions_1_1FailedToPartitionEngineError.html", null ],
-    [ "GridFireError", "classgridfire_1_1exceptions_1_1GridFireError.html", "classgridfire_1_1exceptions_1_1GridFireError" ],
-    [ "HashingError", "classgridfire_1_1exceptions_1_1HashingError.html", null ],
-    [ "IllConditionedJacobianError", "classgridfire_1_1exceptions_1_1IllConditionedJacobianError.html", null ],
-    [ "InvalidQSESolutionError", "classgridfire_1_1exceptions_1_1InvalidQSESolutionError.html", null ],
-    [ "JacobianError", "classgridfire_1_1exceptions_1_1JacobianError.html", null ],
-    [ "KINSolSolverFailureError", "classgridfire_1_1exceptions_1_1KINSolSolverFailureError.html", null ],
-    [ "MissingBaseReactionError", "classgridfire_1_1exceptions_1_1MissingBaseReactionError.html", null ],
-    [ "MissingKeyReactionError", "classgridfire_1_1exceptions_1_1MissingKeyReactionError.html", null ],
-    [ "MissingSeedSpeciesError", "classgridfire_1_1exceptions_1_1MissingSeedSpeciesError.html", null ],
-    [ "NetworkResizedError", "classgridfire_1_1exceptions_1_1NetworkResizedError.html", null ],
-    [ "PolicyError", "classgridfire_1_1exceptions_1_1PolicyError.html", "classgridfire_1_1exceptions_1_1PolicyError" ],
-    [ "ReactionError", "classgridfire_1_1exceptions_1_1ReactionError.html", "classgridfire_1_1exceptions_1_1ReactionError" ],
-    [ "ReactionParsingError", "classgridfire_1_1exceptions_1_1ReactionParsingError.html", "classgridfire_1_1exceptions_1_1ReactionParsingError" ],
-    [ "SingularJacobianError", "classgridfire_1_1exceptions_1_1SingularJacobianError.html", null ],
-    [ "SolverError", "classgridfire_1_1exceptions_1_1SolverError.html", "classgridfire_1_1exceptions_1_1SolverError" ],
-    [ "StaleJacobianError", "classgridfire_1_1exceptions_1_1StaleJacobianError.html", null ],
-    [ "SUNDIALSError", "classgridfire_1_1exceptions_1_1SUNDIALSError.html", null ],
-    [ "UnableToSetNetworkReactionsError", "classgridfire_1_1exceptions_1_1UnableToSetNetworkReactionsError.html", null ],
-    [ "UninitializedJacobianError", "classgridfire_1_1exceptions_1_1UninitializedJacobianError.html", null ],
-    [ "UnknownJacobianError", "classgridfire_1_1exceptions_1_1UnknownJacobianError.html", null ],
-    [ "UtilityError", "classgridfire_1_1exceptions_1_1UtilityError.html", "classgridfire_1_1exceptions_1_1UtilityError" ]
+    [ "BadCollectionError", "classgridfire_1_1exceptions_1_1_bad_collection_error.html", null ],
+    [ "BadRHSEngineError", "classgridfire_1_1exceptions_1_1_bad_r_h_s_engine_error.html", null ],
+    [ "CVODESolverFailureError", "classgridfire_1_1exceptions_1_1_c_v_o_d_e_solver_failure_error.html", null ],
+    [ "DebugException", "classgridfire_1_1exceptions_1_1_debug_exception.html", "classgridfire_1_1exceptions_1_1_debug_exception" ],
+    [ "EngineError", "classgridfire_1_1exceptions_1_1_engine_error.html", "classgridfire_1_1exceptions_1_1_engine_error" ],
+    [ "FailedToPartitionEngineError", "classgridfire_1_1exceptions_1_1_failed_to_partition_engine_error.html", null ],
+    [ "GridFireError", "classgridfire_1_1exceptions_1_1_grid_fire_error.html", "classgridfire_1_1exceptions_1_1_grid_fire_error" ],
+    [ "HashingError", "classgridfire_1_1exceptions_1_1_hashing_error.html", null ],
+    [ "IllConditionedJacobianError", "classgridfire_1_1exceptions_1_1_ill_conditioned_jacobian_error.html", null ],
+    [ "InvalidQSESolutionError", "classgridfire_1_1exceptions_1_1_invalid_q_s_e_solution_error.html", null ],
+    [ "JacobianError", "classgridfire_1_1exceptions_1_1_jacobian_error.html", null ],
+    [ "KINSolSolverFailureError", "classgridfire_1_1exceptions_1_1_k_i_n_sol_solver_failure_error.html", null ],
+    [ "MissingBaseReactionError", "classgridfire_1_1exceptions_1_1_missing_base_reaction_error.html", null ],
+    [ "MissingKeyReactionError", "classgridfire_1_1exceptions_1_1_missing_key_reaction_error.html", null ],
+    [ "MissingSeedSpeciesError", "classgridfire_1_1exceptions_1_1_missing_seed_species_error.html", null ],
+    [ "NetworkResizedError", "classgridfire_1_1exceptions_1_1_network_resized_error.html", null ],
+    [ "PolicyError", "classgridfire_1_1exceptions_1_1_policy_error.html", "classgridfire_1_1exceptions_1_1_policy_error" ],
+    [ "ReactionError", "classgridfire_1_1exceptions_1_1_reaction_error.html", "classgridfire_1_1exceptions_1_1_reaction_error" ],
+    [ "ReactionParsingError", "classgridfire_1_1exceptions_1_1_reaction_parsing_error.html", "classgridfire_1_1exceptions_1_1_reaction_parsing_error" ],
+    [ "ScratchPadError", "classgridfire_1_1exceptions_1_1_scratch_pad_error.html", "classgridfire_1_1exceptions_1_1_scratch_pad_error" ],
+    [ "SingularJacobianError", "classgridfire_1_1exceptions_1_1_singular_jacobian_error.html", null ],
+    [ "SolverError", "classgridfire_1_1exceptions_1_1_solver_error.html", "classgridfire_1_1exceptions_1_1_solver_error" ],
+    [ "StaleJacobianError", "classgridfire_1_1exceptions_1_1_stale_jacobian_error.html", null ],
+    [ "SUNDIALSError", "classgridfire_1_1exceptions_1_1_s_u_n_d_i_a_l_s_error.html", null ],
+    [ "UnableToSetNetworkReactionsError", "classgridfire_1_1exceptions_1_1_unable_to_set_network_reactions_error.html", null ],
+    [ "UninitializedJacobianError", "classgridfire_1_1exceptions_1_1_uninitialized_jacobian_error.html", null ],
+    [ "UnknownJacobianError", "classgridfire_1_1exceptions_1_1_unknown_jacobian_error.html", null ],
+    [ "UtilityError", "classgridfire_1_1exceptions_1_1_utility_error.html", "classgridfire_1_1exceptions_1_1_utility_error" ]
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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  <tbody>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+<script type="text/javascript">
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 <div id="doc-content">
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 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
 Namespaces</h2></td></tr>
-<tr class="memitem:namespacegridfire_1_1io_1_1gen" id="r_namespacegridfire_1_1io_1_1gen"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1io_1_1gen.html">gen</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1io_1_1gen.html">gen</a></td></tr>
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 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1io_1_1generative.html">generative</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html">MESANetworkFileParser</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A parser for MESA-format network files.  <a href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html">NetworkFileParser</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">An abstract base class for network file parsers.  <a href="classgridfire_1_1io_1_1_network_file_parser.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1io_1_1SimpleReactionListFileParser.html">SimpleReactionListFileParser</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html">SimpleReactionListFileParser</a></td></tr>
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 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="typedef-members" name="typedef-members"></a>
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+          <td class="memname">typedef std::vector&lt;std::string&gt; <a class="el" href="#abcbdcbd13cfa8c9fbe1b48e8ee2cc352">gridfire::io::ParsedNetworkData</a></td>
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-    [ "NetworkFileParser", "classgridfire_1_1io_1_1NetworkFileParser.html", "classgridfire_1_1io_1_1NetworkFileParser" ],
-    [ "SimpleReactionListFileParser", "classgridfire_1_1io_1_1SimpleReactionListFileParser.html", "classgridfire_1_1io_1_1SimpleReactionListFileParser" ],
+    [ "generative", "namespacegridfire_1_1io_1_1generative.html", [
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+      [ "get_mesa_iso_name", "namespacegridfire_1_1io_1_1generative.html#aff53d5d630dc7bc645cc59e65a95d66f", null ],
+      [ "get_mesa_reaction_name", "namespacegridfire_1_1io_1_1generative.html#ac38b31cff5bee6bf41396f6a960bb5e6", null ],
+      [ "is_alpha", "namespacegridfire_1_1io_1_1generative.html#a028328808a1c090e9b05858514a0d021", null ],
+      [ "is_neutron", "namespacegridfire_1_1io_1_1generative.html#ae41f6b8144d89035cb8448ba77389ec0", null ],
+      [ "is_proton", "namespacegridfire_1_1io_1_1generative.html#a7fd30f53c753e9f07921d95b1c10ea62", null ]
+    ] ],
+    [ "MESANetworkFileParser", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html", "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser" ],
+    [ "NetworkFileParser", "classgridfire_1_1io_1_1_network_file_parser.html", "classgridfire_1_1io_1_1_network_file_parser" ],
+    [ "SimpleReactionListFileParser", "classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html", "classgridfire_1_1io_1_1_simple_reaction_list_file_parser" ],
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@@ -100,32 +107,34 @@ $(document).ready(function(){initNavTree('namespacegridfire_1_1io_1_1gen.html','
 <div class="contents">
 
 <p>Namespace for generative input/output functionalities.  
-<a href="namespacegridfire_1_1io_1_1gen.html#details">More...</a></p>
+<a href="#details">More...</a></p>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
 Classes</h2></td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1io_1_1gen_1_1PyFunctionDef.html">PyFunctionDef</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structure representing a Python function definition.  <a href="structgridfire_1_1io_1_1gen_1_1PyFunctionDef.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html">PyFunctionDef</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Structure representing a Python function definition.  <a href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html#details">More...</a><br /></td></tr>
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 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
-<tr class="memitem:aed61026cbd83e7a15565e4a0ad0849b9" id="r_aed61026cbd83e7a15565e4a0ad0849b9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1io_1_1gen_1_1PyFunctionDef.html">PyFunctionDef</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1io_1_1gen.html#aed61026cbd83e7a15565e4a0ad0849b9">exportReactionToPy</a> (const <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html">reaction::Reaction</a> &amp;reaction)</td></tr>
+<tr class="memitem:aed61026cbd83e7a15565e4a0ad0849b9" id="r_aed61026cbd83e7a15565e4a0ad0849b9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html">PyFunctionDef</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aed61026cbd83e7a15565e4a0ad0849b9">exportReactionToPy</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;reaction)</td></tr>
 <tr class="memdesc:aed61026cbd83e7a15565e4a0ad0849b9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exports a reaction to a Python function definition.  <br /></td></tr>
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-<tr class="memitem:a597ff691fb592f7306af96a269117631" id="r_a597ff691fb592f7306af96a269117631"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1io_1_1gen.html#a597ff691fb592f7306af96a269117631">exportEngineToPy</a> (const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">engine::DynamicEngine</a> &amp;engine)</td></tr>
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-<tr class="memdesc:ac192d690214100bf8d938bffaeefbe64"><td class="mdescLeft">&#160;</td><td class="mdescRight">Exports a dynamic engine to a Python file.  <br /></td></tr>
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 </table>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Namespace for generative input/output functionalities. </p>
 <p>This namespace contains functions and structures related to exporting reactions and engines to Python code. It provides tools to convert internal representations of reactions and engines into Python functions and scripts that can be used for further analysis or integration with Python-based workflows. </p>
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-<h2 class="memtitle"><span class="permalink"><a href="#a597ff691fb592f7306af96a269117631">&#9670;&#160;</a></span>exportEngineToPy() <span class="overload">[1/2]</span></h2>
+<a id="a00babb7b1a925815729d61065bbcdf67" name="a00babb7b1a925815729d61065bbcdf67"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a00babb7b1a925815729d61065bbcdf67">&#9670;&#160;</a></span>exportEngineToPy() <span class="overload">[1/3]</span></h2>
 
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-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">engine::DynamicEngine</a> &amp;&#160;</td>
-          <td class="paramname"><em>engine</em></td><td>)</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a0db8d917f808ba348672780f63b6c717" name="a0db8d917f808ba348672780f63b6c717"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0db8d917f808ba348672780f63b6c717">&#9670;&#160;</a></span>exportEngineToPy() <span class="overload">[2/3]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::io::gen::exportEngineToPy </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>fileName</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Exports a dynamic engine to a Python file. </p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">ctx</td><td></td></tr>
+    <tr><td class="paramname">engine</td><td>The dynamic engine to export. </td></tr>
+    <tr><td class="paramname">fileName</td><td>The name of the file to write the Python script to.</td></tr>
+  </table>
+  </dd>
+</dl>
+<p>This function writes the Python script representation of the given dynamic engine to the specified file. </p>
+
+</div>
+</div>
+<a id="a4b6cc430d1b8c3b9d329914b915869c6" name="a4b6cc430d1b8c3b9d329914b915869c6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4b6cc430d1b8c3b9d329914b915869c6">&#9670;&#160;</a></span>exportEngineToPy() <span class="overload">[3/3]</span></h2>
+
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+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::string gridfire::io::gen::exportEngineToPy </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>&#160;)</td>
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@@ -150,44 +220,6 @@ Functions</h2></td></tr>
 <dl class="section return"><dt>Returns</dt><dd>A string containing the Python script representation of the engine.</dd></dl>
 <p>This function converts the given dynamic engine into a Python script that can be used to recreate the engine's functionality in Python. </p>
 
-</div>
-</div>
-<a id="ac192d690214100bf8d938bffaeefbe64" name="ac192d690214100bf8d938bffaeefbe64"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac192d690214100bf8d938bffaeefbe64">&#9670;&#160;</a></span>exportEngineToPy() <span class="overload">[2/2]</span></h2>
-
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-<div class="memproto">
-      <table class="memname">
-        <tr>
-          <td class="memname">void gridfire::io::gen::exportEngineToPy </td>
-          <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">engine::DynamicEngine</a> &amp;&#160;</td>
-          <td class="paramname"><em>engine</em>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>fileName</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
-        </tr>
-      </table>
-</div><div class="memdoc">
-
-<p>Exports a dynamic engine to a Python file. </p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">engine</td><td>The dynamic engine to export. </td></tr>
-    <tr><td class="paramname">fileName</td><td>The name of the file to write the Python script to.</td></tr>
-  </table>
-  </dd>
-</dl>
-<p>This function writes the Python script representation of the given dynamic engine to the specified file. </p>
-
 </div>
 </div>
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+          <td class="memname"><a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html">PyFunctionDef</a> gridfire::io::gen::exportReactionToPy </td>
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-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html">reaction::Reaction</a> &amp;&#160;</td>
-          <td class="paramname"><em>reaction</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
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+<dl class="section return"><dt>Returns</dt><dd>A <a class="el" href="structgridfire_1_1io_1_1gen_1_1_py_function_def.html" title="Structure representing a Python function definition.">PyFunctionDef</a> structure containing the Python function representation of the reaction.</dd></dl>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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index 9a771b14..a1752eeb 100644
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 var namespacegridfire_1_1io_1_1gen =
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-    [ "exportEngineToPy", "namespacegridfire_1_1io_1_1gen.html#a597ff691fb592f7306af96a269117631", null ],
-    [ "exportEngineToPy", "namespacegridfire_1_1io_1_1gen.html#ac192d690214100bf8d938bffaeefbe64", null ],
+    [ "PyFunctionDef", "structgridfire_1_1io_1_1gen_1_1_py_function_def.html", "structgridfire_1_1io_1_1gen_1_1_py_function_def" ],
+    [ "exportEngineToPy", "namespacegridfire_1_1io_1_1gen.html#a00babb7b1a925815729d61065bbcdf67", null ],
+    [ "exportEngineToPy", "namespacegridfire_1_1io_1_1gen.html#a0db8d917f808ba348672780f63b6c717", null ],
+    [ "exportEngineToPy", "namespacegridfire_1_1io_1_1gen.html#a4b6cc430d1b8c3b9d329914b915869c6", null ],
     [ "exportReactionToPy", "namespacegridfire_1_1io_1_1gen.html#aed61026cbd83e7a15565e4a0ad0849b9", null ]
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new file mode 100644
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+</div>
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+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::io::generative Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:aff53d5d630dc7bc645cc59e65a95d66f" id="r_aff53d5d630dc7bc645cc59e65a95d66f"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aff53d5d630dc7bc645cc59e65a95d66f">get_mesa_iso_name</a> (const fourdst::atomic::Species &amp;species)</td></tr>
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+<tr class="separator:a7fd30f53c753e9f07921d95b1c10ea62"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ae41f6b8144d89035cb8448ba77389ec0"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ac38b31cff5bee6bf41396f6a960bb5e6"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a4fc5d84b9793ea33dcb4619094287008"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a4fc5d84b9793ea33dcb4619094287008" name="a4fc5d84b9793ea33dcb4619094287008"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4fc5d84b9793ea33dcb4619094287008">&#9670;&#160;</a></span>export_engine_to_mesa_net()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::string gridfire::io::generative::export_engine_to_mesa_net </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>skip_weak</em></span>&#160;)</td>
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+<h2 class="memtitle"><span class="permalink"><a href="#aff53d5d630dc7bc645cc59e65a95d66f">&#9670;&#160;</a></span>get_mesa_iso_name()</h2>
+
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+<div class="memproto">
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+        <tr>
+          <td class="memname">std::string gridfire::io::generative::get_mesa_iso_name </td>
+          <td>(</td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ac38b31cff5bee6bf41396f6a960bb5e6" name="ac38b31cff5bee6bf41396f6a960bb5e6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac38b31cff5bee6bf41396f6a960bb5e6">&#9670;&#160;</a></span>get_mesa_reaction_name()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::string gridfire::io::generative::get_mesa_reaction_name </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a028328808a1c090e9b05858514a0d021" name="a028328808a1c090e9b05858514a0d021"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a028328808a1c090e9b05858514a0d021">&#9670;&#160;</a></span>is_alpha()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::io::generative::is_alpha </td>
+          <td>(</td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ae41f6b8144d89035cb8448ba77389ec0" name="ae41f6b8144d89035cb8448ba77389ec0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae41f6b8144d89035cb8448ba77389ec0">&#9670;&#160;</a></span>is_neutron()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::io::generative::is_neutron </td>
+          <td>(</td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a7fd30f53c753e9f07921d95b1c10ea62" name="a7fd30f53c753e9f07921d95b1c10ea62"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7fd30f53c753e9f07921d95b1c10ea62">&#9670;&#160;</a></span>is_proton()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::io::generative::is_proton </td>
+          <td>(</td>
+          <td class="paramtype">const fourdst::atomic::Species &amp;</td>          <td class="paramname"><span class="paramname"><em>species</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1io.html">io</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1io_1_1generative.html">generative</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
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diff --git a/docs/html/namespacegridfire_1_1omp.html b/docs/html/namespacegridfire_1_1omp.html
new file mode 100644
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+<meta name="generator" content="Doxygen 1.13.2"/>
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+<title>GridFire: gridfire::omp Namespace Reference</title>
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+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
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+/* @license-end */
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+<div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function(){initNavTree('namespacegridfire_1_1omp.html',''); initResizable(true); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
+     onkeydown="return searchBox.OnSearchSelectKey(event)">
+</div>
+
+<!-- iframe showing the search results (closed by default) -->
+<div id="MSearchResultsWindow">
+<div id="MSearchResults">
+<div class="SRPage">
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+<div id="SRResults"></div>
+<div class="SRStatus" id="Loading">Loading...</div>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::omp Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a6f67f48327b81e229d6d1e0dea68e12b" id="r_a6f67f48327b81e229d6d1e0dea68e12b"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6f67f48327b81e229d6d1e0dea68e12b">log_not_in_parallel_mode</a> ()</td></tr>
+<tr class="separator:a6f67f48327b81e229d6d1e0dea68e12b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a6f67f48327b81e229d6d1e0dea68e12b" name="a6f67f48327b81e229d6d1e0dea68e12b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6f67f48327b81e229d6d1e0dea68e12b">&#9670;&#160;</a></span>log_not_in_parallel_mode()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::omp::log_not_in_parallel_mode </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1omp.html">omp</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/namespacegridfire_1_1partition.html b/docs/html/namespacegridfire_1_1partition.html
index 8cd7fc1b..24636816 100644
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+++ b/docs/html/namespacegridfire_1_1partition.html
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 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
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-<tr class="memitem:namespacegridfire_1_1partition_1_1record" id="r_namespacegridfire_1_1partition_1_1record"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1partition_1_1record.html">record</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1partition_1_1record.html">record</a></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1CompositePartitionFunction.html">CompositePartitionFunction</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Combines multiple <a class="el" href="classgridfire_1_1partition_1_1PartitionFunction.html" title="Abstract interface for evaluating nuclear partition functions.">PartitionFunction</a> instances into a single composite strategy.  <a href="classgridfire_1_1partition_1_1CompositePartitionFunction.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html">CompositePartitionFunction</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Combines multiple <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html" title="Abstract interface for evaluating nuclear partition functions.">PartitionFunction</a> instances into a single composite strategy.  <a href="classgridfire_1_1partition_1_1_composite_partition_function.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1GroundStatePartitionFunction.html">GroundStatePartitionFunction</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Partition function implementation for nuclear ground states.  <a href="classgridfire_1_1partition_1_1GroundStatePartitionFunction.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html">GroundStatePartitionFunction</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Partition function implementation for nuclear ground states.  <a href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1PartitionFunction.html">PartitionFunction</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract interface for evaluating nuclear partition functions.  <a href="classgridfire_1_1partition_1_1PartitionFunction.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1_partition_function.html">PartitionFunction</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract interface for evaluating nuclear partition functions.  <a href="classgridfire_1_1partition_1_1_partition_function.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1RauscherThielemannPartitionFunction.html">RauscherThielemannPartitionFunction</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Partition function using Rauscher-Thielemann tabulated normalized G-values.  <a href="classgridfire_1_1partition_1_1RauscherThielemannPartitionFunction.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html">RauscherThielemannPartitionFunction</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Partition function using Rauscher-Thielemann tabulated normalized G-values.  <a href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#details">More...</a><br /></td></tr>
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 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="enum-members" name="enum-members"></a>
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-<tr class="memitem:ae931a76ba5efada4ca45ac93333e728c" id="r_ae931a76ba5efada4ca45ac93333e728c"><td class="memItemLeft" align="right" valign="top">enum &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728c">BasePartitionType</a> { <a class="el" href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1">RauscherThielemann</a>
-, <a class="el" href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335">GroundState</a>
+<tr class="memitem:ae931a76ba5efada4ca45ac93333e728c" id="r_ae931a76ba5efada4ca45ac93333e728c"><td class="memItemLeft" align="right" valign="top">enum &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae931a76ba5efada4ca45ac93333e728c">BasePartitionType</a> { <a class="el" href="#ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1">RauscherThielemann</a>
+, <a class="el" href="#ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335">GroundState</a>
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+<tr class="memdesc:ae931a76ba5efada4ca45ac93333e728c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumerates available partition function implementations.  <a href="#ae931a76ba5efada4ca45ac93333e728c">More...</a><br /></td></tr>
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 Variables</h2></td></tr>
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+<tr class="memitem:a97237521bc760f7521346f8db472dc8e" id="r_a97237521bc760f7521346f8db472dc8e"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c">BasePartitionType</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a97237521bc760f7521346f8db472dc8e">basePartitionTypeToString</a></td></tr>
+<tr class="memdesc:a97237521bc760f7521346f8db472dc8e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mapping from <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c" title="Enumerates available partition function implementations.">BasePartitionType</a> enum to human-readable string.  <br /></td></tr>
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-<tr class="memdesc:a84de6308486d35ce8bc1a9dea52dfa4a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mapping from string to BasePartitionType enum.  <br /></td></tr>
+<tr class="memitem:a84de6308486d35ce8bc1a9dea52dfa4a" id="r_a84de6308486d35ce8bc1a9dea52dfa4a"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; std::string, <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c">BasePartitionType</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a84de6308486d35ce8bc1a9dea52dfa4a">stringToBasePartitionType</a></td></tr>
+<tr class="memdesc:a84de6308486d35ce8bc1a9dea52dfa4a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mapping from string to <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c" title="Enumerates available partition function implementations.">BasePartitionType</a> enum.  <br /></td></tr>
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+<tr class="memitem:a1e08a3c20c55bc6fa4a4ecdf7ea57b8f" id="r_a1e08a3c20c55bc6fa4a4ecdf7ea57b8f"><td class="memItemLeft" align="right" valign="top">static constexpr std::array&lt; double, 24 &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1e08a3c20c55bc6fa4a4ecdf7ea57b8f">RT_TEMPERATURE_GRID_T9</a></td></tr>
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 <h2 class="groupheader">Enumeration Type Documentation</h2>
@@ -148,7 +155,7 @@ Variables</h2></td></tr>
 <div class="memproto">
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         <tr>
-          <td class="memname">enum <a class="el" href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728c">gridfire::partition::BasePartitionType</a></td>
+          <td class="memname">enum <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c">gridfire::partition::BasePartitionType</a></td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -175,25 +182,25 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">std::unordered_map&lt;<a class="el" href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728c">BasePartitionType</a>, std::string&gt; gridfire::partition::basePartitionTypeToString</td>
+          <td class="memname">std::unordered_map&lt;<a class="el" href="#ae931a76ba5efada4ca45ac93333e728c">BasePartitionType</a>, std::string&gt; gridfire::partition::basePartitionTypeToString</td>
         </tr>
       </table>
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+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
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 <b>Initial value:</b><div class="fragment"><div class="line">= {</div>
-<div class="line">        {<a class="code hl_enumvalue" href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1">RauscherThielemann</a>, <span class="stringliteral">&quot;RauscherThielemann&quot;</span>},</div>
-<div class="line">        {<a class="code hl_enumvalue" href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335">GroundState</a>, <span class="stringliteral">&quot;GroundState&quot;</span>}</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1">RauscherThielemann</a>, <span class="stringliteral">&quot;RauscherThielemann&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335">GroundState</a>, <span class="stringliteral">&quot;GroundState&quot;</span>}</div>
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-<div class="ttc" id="anamespacegridfire_1_1partition_html_ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1"><div class="ttname"><a href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1">gridfire::partition::RauscherThielemann</a></div><div class="ttdeci">@ RauscherThielemann</div><div class="ttdoc">Rauscher-Thielemann partition function.</div><div class="ttdef"><b>Definition</b> partition_types.h:16</div></div>
-<div class="ttc" id="anamespacegridfire_1_1partition_html_ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335"><div class="ttname"><a href="namespacegridfire_1_1partition.html#ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335">gridfire::partition::GroundState</a></div><div class="ttdeci">@ GroundState</div><div class="ttdoc">Ground state partition function.</div><div class="ttdef"><b>Definition</b> partition_types.h:17</div></div>
+<div class="ttc" id="anamespacegridfire_1_1partition_html_ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1"><div class="ttname"><a href="#ae931a76ba5efada4ca45ac93333e728ca4ca5b5dcd7343b06b860f05f3bc454b1">gridfire::partition::RauscherThielemann</a></div><div class="ttdeci">@ RauscherThielemann</div><div class="ttdoc">Rauscher-Thielemann partition function.</div><div class="ttdef"><b>Definition</b> partition_types.h:16</div></div>
+<div class="ttc" id="anamespacegridfire_1_1partition_html_ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335"><div class="ttname"><a href="#ae931a76ba5efada4ca45ac93333e728cab3ecbf203bf429cbb751d1de1e58f335">gridfire::partition::GroundState</a></div><div class="ttdeci">@ GroundState</div><div class="ttdoc">Ground state partition function.</div><div class="ttdef"><b>Definition</b> partition_types.h:17</div></div>
 </div><!-- fragment -->
-<p>Mapping from BasePartitionType enum to human-readable string. </p>
-<p>Used for logging, reporting, or serialization. Ensure that all enum values are represented in this map. </p><dl class="section pre"><dt>Precondition</dt><dd>Contains entries for all values of BasePartitionType. </dd></dl>
-<dl class="section post"><dt>Postcondition</dt><dd>Can convert BasePartitionType to corresponding string. </dd></dl>
+<p>Mapping from <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c" title="Enumerates available partition function implementations.">BasePartitionType</a> enum to human-readable string. </p>
+<p>Used for logging, reporting, or serialization. Ensure that all enum values are represented in this map. </p><dl class="section pre"><dt>Precondition</dt><dd>Contains entries for all values of <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c" title="Enumerates available partition function implementations.">BasePartitionType</a>. </dd></dl>
+<dl class="section post"><dt>Postcondition</dt><dd>Can convert <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c" title="Enumerates available partition function implementations.">BasePartitionType</a> to corresponding string. </dd></dl>
 
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   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">constexpr std::array&lt;double, 24&gt; gridfire::partition::RT_TEMPERATURE_GRID_T9</td>
+          <td class="memname">std::array&lt;double, 24&gt; gridfire::partition::RT_TEMPERATURE_GRID_T9</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">static</span><span class="mlabel">constexpr</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
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         <tr>
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+          <td class="memname">std::unordered_map&lt;std::string, <a class="el" href="#ae931a76ba5efada4ca45ac93333e728c">BasePartitionType</a>&gt; gridfire::partition::stringToBasePartitionType</td>
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+    [ "GroundStatePartitionFunction", "classgridfire_1_1partition_1_1_ground_state_partition_function.html", "classgridfire_1_1partition_1_1_ground_state_partition_function" ],
+    [ "PartitionFunction", "classgridfire_1_1partition_1_1_partition_function.html", "classgridfire_1_1partition_1_1_partition_function" ],
+    [ "RauscherThielemannPartitionFunction", "classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html", "classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function" ],
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+    [ "RauscherThielemannPartitionDataRecord", "structgridfire_1_1partition_1_1record_1_1_rauscher_thielemann_partition_data_record.html", "structgridfire_1_1partition_1_1record_1_1_rauscher_thielemann_partition_data_record" ]
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html">HotCNOIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO I Chain Policy.  <a href="classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1HotCNOIIIChainPolicy.html">HotCNOIIIChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html">HotCNOIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO II Chain Policy.  <a href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1MainSequencePolicy.html">MainSequencePolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A <a class="el" href="classgridfire_1_1policy_1_1NetworkPolicy.html" title="Abstract interface for policies that construct DynamicEngine networks from a seed composition.">NetworkPolicy</a> for building reaction networks suitable for low-mass main-sequence stars.  <a href="classgridfire_1_1policy_1_1MainSequencePolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html">HotCNOIIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Hot CNO III Chain Policy.  <a href="classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1MainSequenceReactionChainPolicy.html">MainSequenceReactionChainPolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Main Sequence Reaction Chain Policy.  <a href="classgridfire_1_1policy_1_1MainSequenceReactionChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_policy.html">MainSequencePolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html" title="Abstract interface for policies that construct DynamicEngine networks from a seed composition.">NetworkPolicy</a> for building reaction networks suitable for low-mass main-sequence stars.  <a href="classgridfire_1_1policy_1_1_main_sequence_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1MultiReactionChainPolicy.html">MultiReactionChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html">MainSequenceReactionChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Main Sequence Reaction Chain Policy.  <a href="classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1NetworkPolicy.html">NetworkPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html">MultiReactionChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html" title="Abstract interface encapsulating a set of reactions representing a single chain or pathway.">ReactionChainPolicy</a> composed of multiple child <a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html" title="Abstract interface encapsulating a set of reactions representing a single chain or pathway.">ReactionChainPolicy</a> instances.  <a href="classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonChainPolicy.html">ProtonProtonChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">NetworkPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract interface for policies that construct DynamicEngine networks from a seed composition.  <a href="classgridfire_1_1policy_1_1_network_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIChainPolicy.html">ProtonProtonIChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_chain_policy.html">ProtonProtonChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Proton-Proton Chain Policy.  <a href="classgridfire_1_1policy_1_1_proton_proton_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIIChainPolicy.html">ProtonProtonIIChainPolicy</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html">ProtonProtonIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Proton-Proton I Chain Policy.  <a href="classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1ProtonProtonIIIChainPolicy.html">ProtonProtonIIIChainPolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Proton-Proton III Chain Policy.  <a href="classgridfire_1_1policy_1_1ProtonProtonIIIChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html">ProtonProtonIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Proton-Proton II Chain Policy.  <a href="classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1ReactionChainPolicy.html">ReactionChainPolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract interface encapsulating a set of reactions representing a single chain or pathway.  <a href="classgridfire_1_1policy_1_1ReactionChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html">ProtonProtonIIIChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Proton-Proton III Chain Policy.  <a href="classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1TemperatureDependentChainPolicy.html">TemperatureDependentChainPolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for reaction chain policies that are active only within specific temperature ranges.  <a href="classgridfire_1_1policy_1_1TemperatureDependentChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_reaction_chain_policy.html">ReactionChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract interface encapsulating a set of reactions representing a single chain or pathway.  <a href="classgridfire_1_1policy_1_1_reaction_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1TripleAlphaChainPolicy.html">TripleAlphaChainPolicy</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Triple-Alpha Chain Policy.  <a href="classgridfire_1_1policy_1_1TripleAlphaChainPolicy.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html">TemperatureDependentChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for reaction chain policies that are active only within specific temperature ranges.  <a href="classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html">TripleAlphaChainPolicy</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Triple-Alpha Chain Policy.  <a href="classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="enum-members" name="enum-members"></a>
 Enumerations</h2></td></tr>
-<tr class="memitem:a0f52cd334fb84998d9c68430a41f6109" id="r_a0f52cd334fb84998d9c68430a41f6109"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109">NetworkPolicyStatus</a> { <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109add652546039b18970b8dcf2cff824268">UNINITIALIZED</a>
-, <a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109af8392674ffb9a1455835c2cd5eb3f5ae">INITIALIZED_UNVERIFIED</a>
-, <a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109a2f017cce8fa4a6b50e2034ff16d1eda3">MISSING_KEY_REACTION</a>
-, <a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109ae0584675cd48c19691ed09c98b2d2730">MISSING_KEY_SPECIES</a>
+<tr class="memitem:a0f52cd334fb84998d9c68430a41f6109" id="r_a0f52cd334fb84998d9c68430a41f6109"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0f52cd334fb84998d9c68430a41f6109">NetworkPolicyStatus</a> { <br />
+&#160;&#160;<a class="el" href="#a0f52cd334fb84998d9c68430a41f6109add652546039b18970b8dcf2cff824268">UNINITIALIZED</a>
+, <a class="el" href="#a0f52cd334fb84998d9c68430a41f6109af8392674ffb9a1455835c2cd5eb3f5ae">INITIALIZED_UNVERIFIED</a>
+, <a class="el" href="#a0f52cd334fb84998d9c68430a41f6109a2f017cce8fa4a6b50e2034ff16d1eda3">MISSING_KEY_REACTION</a>
+, <a class="el" href="#a0f52cd334fb84998d9c68430a41f6109ae0584675cd48c19691ed09c98b2d2730">MISSING_KEY_SPECIES</a>
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e">INITIALIZED_VERIFIED</a>
+&#160;&#160;<a class="el" href="#a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e">INITIALIZED_VERIFIED</a>
 <br />
  }</td></tr>
-<tr class="memdesc:a0f52cd334fb84998d9c68430a41f6109"><td class="mdescLeft">&#160;</td><td class="mdescRight">Lifecycle/verification status for a NetworkPolicy instance.  <a href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109">More...</a><br /></td></tr>
+<tr class="memdesc:a0f52cd334fb84998d9c68430a41f6109"><td class="mdescLeft">&#160;</td><td class="mdescRight">Lifecycle/verification status for a NetworkPolicy instance.  <a href="#a0f52cd334fb84998d9c68430a41f6109">More...</a><br /></td></tr>
 <tr class="separator:a0f52cd334fb84998d9c68430a41f6109"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:adc1a8daf56732f15272170fdd324a1f0" id="r_adc1a8daf56732f15272170fdd324a1f0"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#adc1a8daf56732f15272170fdd324a1f0">NetworkPolicyStatusToString</a> (<a class="el" href="#a0f52cd334fb84998d9c68430a41f6109">NetworkPolicyStatus</a> status)</td></tr>
+<tr class="separator:adc1a8daf56732f15272170fdd324a1f0"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Enumeration Type Documentation</h2>
 <a id="a0f52cd334fb84998d9c68430a41f6109" name="a0f52cd334fb84998d9c68430a41f6109"></a>
@@ -187,18 +202,18 @@ Enumerations</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109">gridfire::policy::NetworkPolicyStatus</a></td>
+          <td class="memname">enum class <a class="el" href="#a0f52cd334fb84998d9c68430a41f6109">gridfire::policy::NetworkPolicyStatus</a></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
-<p>Lifecycle/verification status for a <a class="el" href="classgridfire_1_1policy_1_1NetworkPolicy.html" title="Abstract interface for policies that construct DynamicEngine networks from a seed composition.">NetworkPolicy</a> instance. </p>
-<p>Used by concrete <a class="el" href="classgridfire_1_1policy_1_1NetworkPolicy.html" title="Abstract interface for policies that construct DynamicEngine networks from a seed composition.">NetworkPolicy</a> implementations to report the state of the policy and the constructed network during/after construction. Tests and callers can inspect the status to determine whether the resulting network meets the policy's requirements. </p>
+<p>Lifecycle/verification status for a <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html" title="Abstract interface for policies that construct DynamicEngine networks from a seed composition.">NetworkPolicy</a> instance. </p>
+<p>Used by concrete <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html" title="Abstract interface for policies that construct DynamicEngine networks from a seed composition.">NetworkPolicy</a> implementations to report the state of the policy and the constructed network during/after construction. Tests and callers can inspect the status to determine whether the resulting network meets the policy's requirements. </p>
 <table class="fieldtable">
 <tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="a0f52cd334fb84998d9c68430a41f6109add652546039b18970b8dcf2cff824268" name="a0f52cd334fb84998d9c68430a41f6109add652546039b18970b8dcf2cff824268"></a>UNINITIALIZED&#160;</td><td class="fielddoc"></td></tr>
 <tr><td class="fieldname"><a id="a0f52cd334fb84998d9c68430a41f6109af8392674ffb9a1455835c2cd5eb3f5ae" name="a0f52cd334fb84998d9c68430a41f6109af8392674ffb9a1455835c2cd5eb3f5ae"></a>INITIALIZED_UNVERIFIED&#160;</td><td class="fielddoc"></td></tr>
@@ -207,6 +222,32 @@ Enumerations</h2></td></tr>
 <tr><td class="fieldname"><a id="a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e" name="a0f52cd334fb84998d9c68430a41f6109aff6473ea13033c0680a084b372f5755e"></a>INITIALIZED_VERIFIED&#160;</td><td class="fielddoc"></td></tr>
 </table>
 
+</div>
+</div>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="adc1a8daf56732f15272170fdd324a1f0" name="adc1a8daf56732f15272170fdd324a1f0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adc1a8daf56732f15272170fdd324a1f0">&#9670;&#160;</a></span>NetworkPolicyStatusToString()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::string gridfire::policy::NetworkPolicyStatusToString </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="#a0f52cd334fb84998d9c68430a41f6109">NetworkPolicyStatus</a></td>          <td class="paramname"><span class="paramname"><em>status</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
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+++ b/docs/html/namespacegridfire_1_1policy.js
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 var namespacegridfire_1_1policy =
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-    [ "CNOIChainPolicy", "classgridfire_1_1policy_1_1CNOIChainPolicy.html", "classgridfire_1_1policy_1_1CNOIChainPolicy" ],
-    [ "CNOIIChainPolicy", "classgridfire_1_1policy_1_1CNOIIChainPolicy.html", "classgridfire_1_1policy_1_1CNOIIChainPolicy" ],
-    [ "CNOIIIChainPolicy", "classgridfire_1_1policy_1_1CNOIIIChainPolicy.html", "classgridfire_1_1policy_1_1CNOIIIChainPolicy" ],
-    [ "CNOIVChainPolicy", "classgridfire_1_1policy_1_1CNOIVChainPolicy.html", "classgridfire_1_1policy_1_1CNOIVChainPolicy" ],
-    [ "HotCNOChainPolicy", "classgridfire_1_1policy_1_1HotCNOChainPolicy.html", "classgridfire_1_1policy_1_1HotCNOChainPolicy" ],
-    [ "HotCNOIChainPolicy", "classgridfire_1_1policy_1_1HotCNOIChainPolicy.html", "classgridfire_1_1policy_1_1HotCNOIChainPolicy" ],
-    [ "HotCNOIIChainPolicy", "classgridfire_1_1policy_1_1HotCNOIIChainPolicy.html", "classgridfire_1_1policy_1_1HotCNOIIChainPolicy" ],
-    [ "HotCNOIIIChainPolicy", "classgridfire_1_1policy_1_1HotCNOIIIChainPolicy.html", "classgridfire_1_1policy_1_1HotCNOIIIChainPolicy" ],
-    [ "MainSequencePolicy", "classgridfire_1_1policy_1_1MainSequencePolicy.html", "classgridfire_1_1policy_1_1MainSequencePolicy" ],
-    [ "MainSequenceReactionChainPolicy", "classgridfire_1_1policy_1_1MainSequenceReactionChainPolicy.html", "classgridfire_1_1policy_1_1MainSequenceReactionChainPolicy" ],
-    [ "MultiReactionChainPolicy", "classgridfire_1_1policy_1_1MultiReactionChainPolicy.html", "classgridfire_1_1policy_1_1MultiReactionChainPolicy" ],
-    [ "NetworkPolicy", "classgridfire_1_1policy_1_1NetworkPolicy.html", "classgridfire_1_1policy_1_1NetworkPolicy" ],
-    [ "ProtonProtonChainPolicy", "classgridfire_1_1policy_1_1ProtonProtonChainPolicy.html", "classgridfire_1_1policy_1_1ProtonProtonChainPolicy" ],
-    [ "ProtonProtonIChainPolicy", "classgridfire_1_1policy_1_1ProtonProtonIChainPolicy.html", "classgridfire_1_1policy_1_1ProtonProtonIChainPolicy" ],
-    [ "ProtonProtonIIChainPolicy", "classgridfire_1_1policy_1_1ProtonProtonIIChainPolicy.html", "classgridfire_1_1policy_1_1ProtonProtonIIChainPolicy" ],
-    [ "ProtonProtonIIIChainPolicy", "classgridfire_1_1policy_1_1ProtonProtonIIIChainPolicy.html", "classgridfire_1_1policy_1_1ProtonProtonIIIChainPolicy" ],
-    [ "ReactionChainPolicy", "classgridfire_1_1policy_1_1ReactionChainPolicy.html", "classgridfire_1_1policy_1_1ReactionChainPolicy" ],
-    [ "TemperatureDependentChainPolicy", "classgridfire_1_1policy_1_1TemperatureDependentChainPolicy.html", "classgridfire_1_1policy_1_1TemperatureDependentChainPolicy" ],
-    [ "TripleAlphaChainPolicy", "classgridfire_1_1policy_1_1TripleAlphaChainPolicy.html", "classgridfire_1_1policy_1_1TripleAlphaChainPolicy" ],
+    [ "CNOChainPolicy", "classgridfire_1_1policy_1_1_c_n_o_chain_policy.html", "classgridfire_1_1policy_1_1_c_n_o_chain_policy" ],
+    [ "CNOIChainPolicy", "classgridfire_1_1policy_1_1_c_n_o_i_chain_policy.html", "classgridfire_1_1policy_1_1_c_n_o_i_chain_policy" ],
+    [ "CNOIIChainPolicy", "classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy.html", "classgridfire_1_1policy_1_1_c_n_o_i_i_chain_policy" ],
+    [ "CNOIIIChainPolicy", "classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy.html", "classgridfire_1_1policy_1_1_c_n_o_i_i_i_chain_policy" ],
+    [ "CNOIVChainPolicy", "classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy.html", "classgridfire_1_1policy_1_1_c_n_o_i_v_chain_policy" ],
+    [ "ConstructionResults", "structgridfire_1_1policy_1_1_construction_results.html", "structgridfire_1_1policy_1_1_construction_results" ],
+    [ "HotCNOChainPolicy", "classgridfire_1_1policy_1_1_hot_c_n_o_chain_policy.html", "classgridfire_1_1policy_1_1_hot_c_n_o_chain_policy" ],
+    [ "HotCNOIChainPolicy", "classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy.html", "classgridfire_1_1policy_1_1_hot_c_n_o_i_chain_policy" ],
+    [ "HotCNOIIChainPolicy", "classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy.html", "classgridfire_1_1policy_1_1_hot_c_n_o_i_i_chain_policy" ],
+    [ "HotCNOIIIChainPolicy", "classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy.html", "classgridfire_1_1policy_1_1_hot_c_n_o_i_i_i_chain_policy" ],
+    [ "MainSequencePolicy", "classgridfire_1_1policy_1_1_main_sequence_policy.html", "classgridfire_1_1policy_1_1_main_sequence_policy" ],
+    [ "MainSequenceReactionChainPolicy", "classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy.html", "classgridfire_1_1policy_1_1_main_sequence_reaction_chain_policy" ],
+    [ "MultiReactionChainPolicy", "classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html", "classgridfire_1_1policy_1_1_multi_reaction_chain_policy" ],
+    [ "NetworkPolicy", "classgridfire_1_1policy_1_1_network_policy.html", "classgridfire_1_1policy_1_1_network_policy" ],
+    [ "ProtonProtonChainPolicy", "classgridfire_1_1policy_1_1_proton_proton_chain_policy.html", "classgridfire_1_1policy_1_1_proton_proton_chain_policy" ],
+    [ "ProtonProtonIChainPolicy", "classgridfire_1_1policy_1_1_proton_proton_i_chain_policy.html", "classgridfire_1_1policy_1_1_proton_proton_i_chain_policy" ],
+    [ "ProtonProtonIIChainPolicy", "classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy.html", "classgridfire_1_1policy_1_1_proton_proton_i_i_chain_policy" ],
+    [ "ProtonProtonIIIChainPolicy", "classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy.html", "classgridfire_1_1policy_1_1_proton_proton_i_i_i_chain_policy" ],
+    [ "ReactionChainPolicy", "classgridfire_1_1policy_1_1_reaction_chain_policy.html", "classgridfire_1_1policy_1_1_reaction_chain_policy" ],
+    [ "TemperatureDependentChainPolicy", "classgridfire_1_1policy_1_1_temperature_dependent_chain_policy.html", "classgridfire_1_1policy_1_1_temperature_dependent_chain_policy" ],
+    [ "TripleAlphaChainPolicy", "classgridfire_1_1policy_1_1_triple_alpha_chain_policy.html", "classgridfire_1_1policy_1_1_triple_alpha_chain_policy" ],
     [ "NetworkPolicyStatus", "namespacegridfire_1_1policy.html#a0f52cd334fb84998d9c68430a41f6109", [
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-    ] ]
+    ] ],
+    [ "NetworkPolicyStatusToString", "namespacegridfire_1_1policy.html#adc1a8daf56732f15272170fdd324a1f0", null ]
 ];
\ No newline at end of file
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+<script type="text/javascript">
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakRateDerivatives.html">WeakRateDerivatives</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Partial derivatives of the log10() fields w.r.t. (T9, log10(rho*Ye)).  <a href="structgridfire_1_1rates_1_1weak_1_1WeakRateDerivatives.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_derivatives.html">WeakRateDerivatives</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Partial derivatives of the log10() fields w.r.t. (T9, log10(rho*Ye)).  <a href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_derivatives.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakRateInterpolator.html">WeakRateInterpolator</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">3D table interpolator for tabulated weak reaction data by isotope.  <a href="classgridfire_1_1rates_1_1weak_1_1WeakRateInterpolator.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html">WeakRateInterpolator</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">3D table interpolator for tabulated weak reaction data by isotope.  <a href="classgridfire_1_1rates_1_1weak_1_1_weak_rate_interpolator.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakRatePayload.html">WeakRatePayload</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Interpolated weak-rate payload at a single state.  <a href="structgridfire_1_1rates_1_1weak_1_1WeakRatePayload.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_payload.html">WeakRatePayload</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Interpolated weak-rate payload at a single state.  <a href="structgridfire_1_1rates_1_1weak_1_1_weak_rate_payload.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html">WeakReaction</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Concrete Reaction representing a single weak process (beta±, e−/e+ capture).  <a href="classgridfire_1_1rates_1_1weak_1_1WeakReaction.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html">WeakReaction</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Concrete Reaction representing a single weak process (beta±, e−/e+ capture).  <a href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1rates_1_1weak_1_1WeakReactionEntry.html">WeakReactionEntry</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A single weak-reaction data point (type, state, and log values).  <a href="structgridfire_1_1rates_1_1weak_1_1WeakReactionEntry.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html">WeakReactionEntry</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A single weak-reaction data point (type, state, and log values).  <a href="structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReactionMap.html">WeakReactionMap</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Index of available weak reactions keyed by species.  <a href="classgridfire_1_1rates_1_1weak_1_1WeakReactionMap.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html">WeakReactionMap</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Index of available weak reactions keyed by species.  <a href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="enum-members" name="enum-members"></a>
 Enumerations</h2></td></tr>
-<tr class="memitem:ae834fb6f8cd1ac922967d5296a25bec7" id="r_ae834fb6f8cd1ac922967d5296a25bec7"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ae834fb6f8cd1ac922967d5296a25bec7">WeakReactionType</a> { <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ae834fb6f8cd1ac922967d5296a25bec7a2f146a0cd66e2d010c8802852db26759">BETA_PLUS_DECAY</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ae834fb6f8cd1ac922967d5296a25bec7a12122315f1a94a10826f77a8fd949a94">BETA_MINUS_DECAY</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ae834fb6f8cd1ac922967d5296a25bec7a26b6967eb578cb1b08373b342bf72ef7">ELECTRON_CAPTURE</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ae834fb6f8cd1ac922967d5296a25bec7ae0be5539e1cf1c424806baa62540aa9d">POSITRON_CAPTURE</a>
+<tr class="memitem:ae834fb6f8cd1ac922967d5296a25bec7" id="r_ae834fb6f8cd1ac922967d5296a25bec7"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae834fb6f8cd1ac922967d5296a25bec7">WeakReactionType</a> { <a class="el" href="#ae834fb6f8cd1ac922967d5296a25bec7a2f146a0cd66e2d010c8802852db26759">BETA_PLUS_DECAY</a>
+, <a class="el" href="#ae834fb6f8cd1ac922967d5296a25bec7a12122315f1a94a10826f77a8fd949a94">BETA_MINUS_DECAY</a>
+, <a class="el" href="#ae834fb6f8cd1ac922967d5296a25bec7a26b6967eb578cb1b08373b342bf72ef7">ELECTRON_CAPTURE</a>
+, <a class="el" href="#ae834fb6f8cd1ac922967d5296a25bec7ae0be5539e1cf1c424806baa62540aa9d">POSITRON_CAPTURE</a>
  }</td></tr>
-<tr class="memdesc:ae834fb6f8cd1ac922967d5296a25bec7"><td class="mdescLeft">&#160;</td><td class="mdescRight">Weak reaction channel identifiers.  <a href="namespacegridfire_1_1rates_1_1weak.html#ae834fb6f8cd1ac922967d5296a25bec7">More...</a><br /></td></tr>
+<tr class="memdesc:ae834fb6f8cd1ac922967d5296a25bec7"><td class="mdescLeft">&#160;</td><td class="mdescRight">Weak reaction channel identifiers.  <a href="#ae834fb6f8cd1ac922967d5296a25bec7">More...</a><br /></td></tr>
 <tr class="separator:ae834fb6f8cd1ac922967d5296a25bec7"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:aeddc9527afbf9755d4252f64ad5d70ca" id="r_aeddc9527afbf9755d4252f64ad5d70ca"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70ca">NeutrinoTypes</a> { <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70caa3fde0fbf2166dfb3dd60458c535699d8">ELECTRON_NEUTRINO</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70caa8d99b7a21c927a7b8274caaf23290de6">ELECTRON_ANTINEUTRINO</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70caaabd6fefb3f84f632c3968acfcd76d554">MUON_NEUTRINO</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70caae6f2e17ddd61e72e331faf8700bbedef">MUON_ANTINEUTRINO</a>
+<tr class="memitem:aeddc9527afbf9755d4252f64ad5d70ca" id="r_aeddc9527afbf9755d4252f64ad5d70ca"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aeddc9527afbf9755d4252f64ad5d70ca">NeutrinoTypes</a> { <br />
+&#160;&#160;<a class="el" href="#aeddc9527afbf9755d4252f64ad5d70caa3fde0fbf2166dfb3dd60458c535699d8">ELECTRON_NEUTRINO</a>
+, <a class="el" href="#aeddc9527afbf9755d4252f64ad5d70caa8d99b7a21c927a7b8274caaf23290de6">ELECTRON_ANTINEUTRINO</a>
+, <a class="el" href="#aeddc9527afbf9755d4252f64ad5d70caaabd6fefb3f84f632c3968acfcd76d554">MUON_NEUTRINO</a>
+, <a class="el" href="#aeddc9527afbf9755d4252f64ad5d70caae6f2e17ddd61e72e331faf8700bbedef">MUON_ANTINEUTRINO</a>
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70caa8c2cdafd7125a278e6e0da4c04e29d9e">TAU_NEUTRINO</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70caa2712e9cfc69c4ee0c4ed136338acb6cc">TAU_ANTINEUTRINO</a>
+&#160;&#160;<a class="el" href="#aeddc9527afbf9755d4252f64ad5d70caa8c2cdafd7125a278e6e0da4c04e29d9e">TAU_NEUTRINO</a>
+, <a class="el" href="#aeddc9527afbf9755d4252f64ad5d70caa2712e9cfc69c4ee0c4ed136338acb6cc">TAU_ANTINEUTRINO</a>
 <br />
  }</td></tr>
-<tr class="memdesc:aeddc9527afbf9755d4252f64ad5d70ca"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumeration of neutrino flavors (for potential extensions and tagging).  <a href="namespacegridfire_1_1rates_1_1weak.html#aeddc9527afbf9755d4252f64ad5d70ca">More...</a><br /></td></tr>
+<tr class="memdesc:aeddc9527afbf9755d4252f64ad5d70ca"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumeration of neutrino flavors (for potential extensions and tagging).  <a href="#aeddc9527afbf9755d4252f64ad5d70ca">More...</a><br /></td></tr>
 <tr class="separator:aeddc9527afbf9755d4252f64ad5d70ca"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a15ca7b1a1951c131fddb9eb011d59550" id="r_a15ca7b1a1951c131fddb9eb011d59550"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a15ca7b1a1951c131fddb9eb011d59550">WeakMapError</a> { <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a15ca7b1a1951c131fddb9eb011d59550a3659baf2b06bba6c02bad8316d517761">SPECIES_NOT_FOUND</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a15ca7b1a1951c131fddb9eb011d59550a9a10f345b0f755d461a8673a5e9ef6b4">UNKNOWN_ERROR</a>
+<tr class="memitem:a15ca7b1a1951c131fddb9eb011d59550" id="r_a15ca7b1a1951c131fddb9eb011d59550"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a15ca7b1a1951c131fddb9eb011d59550">WeakMapError</a> { <a class="el" href="#a15ca7b1a1951c131fddb9eb011d59550a3659baf2b06bba6c02bad8316d517761">SPECIES_NOT_FOUND</a>
+, <a class="el" href="#a15ca7b1a1951c131fddb9eb011d59550a9a10f345b0f755d461a8673a5e9ef6b4">UNKNOWN_ERROR</a>
  }</td></tr>
-<tr class="memdesc:a15ca7b1a1951c131fddb9eb011d59550"><td class="mdescLeft">&#160;</td><td class="mdescRight">Lookup errors for WeakReactionMap queries.  <a href="namespacegridfire_1_1rates_1_1weak.html#a15ca7b1a1951c131fddb9eb011d59550">More...</a><br /></td></tr>
+<tr class="memdesc:a15ca7b1a1951c131fddb9eb011d59550"><td class="mdescLeft">&#160;</td><td class="mdescRight">Lookup errors for WeakReactionMap queries.  <a href="#a15ca7b1a1951c131fddb9eb011d59550">More...</a><br /></td></tr>
 <tr class="separator:a15ca7b1a1951c131fddb9eb011d59550"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a3fc4243d5c894779b986110c3a1ee1d4" id="r_a3fc4243d5c894779b986110c3a1ee1d4"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a3fc4243d5c894779b986110c3a1ee1d4">InterpolationErrorType</a> { <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a3fc4243d5c894779b986110c3a1ee1d4a1516ba0949425312ba92ea385c80dc7a">BOUNDS_ERROR</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a3fc4243d5c894779b986110c3a1ee1d4acc038b1c5dbfcede2eaa525fe0e2379d">UNKNOWN_SPECIES_ERROR</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a3fc4243d5c894779b986110c3a1ee1d4a9a10f345b0f755d461a8673a5e9ef6b4">UNKNOWN_ERROR</a>
+<tr class="memitem:a3fc4243d5c894779b986110c3a1ee1d4" id="r_a3fc4243d5c894779b986110c3a1ee1d4"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4">InterpolationErrorType</a> { <a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4a1516ba0949425312ba92ea385c80dc7a">BOUNDS_ERROR</a>
+, <a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4acc038b1c5dbfcede2eaa525fe0e2379d">UNKNOWN_SPECIES_ERROR</a>
+, <a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4a9a10f345b0f755d461a8673a5e9ef6b4">UNKNOWN_ERROR</a>
  }</td></tr>
-<tr class="memdesc:a3fc4243d5c894779b986110c3a1ee1d4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Error categories for interpolation attempts.  <a href="namespacegridfire_1_1rates_1_1weak.html#a3fc4243d5c894779b986110c3a1ee1d4">More...</a><br /></td></tr>
+<tr class="memdesc:a3fc4243d5c894779b986110c3a1ee1d4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Error categories for interpolation attempts.  <a href="#a3fc4243d5c894779b986110c3a1ee1d4">More...</a><br /></td></tr>
 <tr class="separator:a3fc4243d5c894779b986110c3a1ee1d4"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a5e6ecdf02b9748cf1b0a15a5cc1b34ae" id="r_a5e6ecdf02b9748cf1b0a15a5cc1b34ae"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a5e6ecdf02b9748cf1b0a15a5cc1b34ae">TableAxes</a> { <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a5e6ecdf02b9748cf1b0a15a5cc1b34aea2f0355649dad31dc33ebe251d9f72755">T9</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a5e6ecdf02b9748cf1b0a15a5cc1b34aea1448b5920e7c95f07cbc08d3ba5b9746">LOG_RHOYE</a>
-, <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a5e6ecdf02b9748cf1b0a15a5cc1b34aea5257ed2407fcbb45ab05897fdea80c2b">MUE</a>
+<tr class="memitem:a5e6ecdf02b9748cf1b0a15a5cc1b34ae" id="r_a5e6ecdf02b9748cf1b0a15a5cc1b34ae"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5e6ecdf02b9748cf1b0a15a5cc1b34ae">TableAxes</a> { <a class="el" href="#a5e6ecdf02b9748cf1b0a15a5cc1b34aea2f0355649dad31dc33ebe251d9f72755">T9</a>
+, <a class="el" href="#a5e6ecdf02b9748cf1b0a15a5cc1b34aea1448b5920e7c95f07cbc08d3ba5b9746">LOG_RHOYE</a>
+, <a class="el" href="#a5e6ecdf02b9748cf1b0a15a5cc1b34aea5257ed2407fcbb45ab05897fdea80c2b">MUE</a>
  }</td></tr>
-<tr class="memdesc:a5e6ecdf02b9748cf1b0a15a5cc1b34ae"><td class="mdescLeft">&#160;</td><td class="mdescRight">Axes of the interpolation table.  <a href="namespacegridfire_1_1rates_1_1weak.html#a5e6ecdf02b9748cf1b0a15a5cc1b34ae">More...</a><br /></td></tr>
+<tr class="memdesc:a5e6ecdf02b9748cf1b0a15a5cc1b34ae"><td class="mdescLeft">&#160;</td><td class="mdescRight">Axes of the interpolation table.  <a href="#a5e6ecdf02b9748cf1b0a15a5cc1b34ae">More...</a><br /></td></tr>
 <tr class="separator:a5e6ecdf02b9748cf1b0a15a5cc1b34ae"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
-<tr class="memitem:a81f6133710abef28d9d2b030fdbaaeef" id="r_a81f6133710abef28d9d2b030fdbaaeef"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a81f6133710abef28d9d2b030fdbaaeef">weak_reaction_type_name</a> (const <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ae834fb6f8cd1ac922967d5296a25bec7">WeakReactionType</a> t) noexcept</td></tr>
+<tr class="memitem:a81f6133710abef28d9d2b030fdbaaeef" id="r_a81f6133710abef28d9d2b030fdbaaeef"><td class="memItemLeft" align="right" valign="top">constexpr std::string_view&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a81f6133710abef28d9d2b030fdbaaeef">weak_reaction_type_name</a> (const <a class="el" href="#ae834fb6f8cd1ac922967d5296a25bec7">WeakReactionType</a> t) noexcept</td></tr>
 <tr class="memdesc:a81f6133710abef28d9d2b030fdbaaeef"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abbreviated channel name used in printing and IDs.  <br /></td></tr>
 <tr class="separator:a81f6133710abef28d9d2b030fdbaaeef"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
 Variables</h2></td></tr>
-<tr class="memitem:ac48364695089056d9a9b10689c4338e7" id="r_ac48364695089056d9a9b10689c4338e7"><td class="memItemLeft" align="right" valign="top">static constexpr std::array&lt; <a class="el" href="structgridfire_1_1rates_1_1weak_1_1RateDataRow.html">RateDataRow</a>, 77400 &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ac48364695089056d9a9b10689c4338e7">UNIFIED_WEAK_DATA</a></td></tr>
+<tr class="memitem:ac48364695089056d9a9b10689c4338e7" id="r_ac48364695089056d9a9b10689c4338e7"><td class="memItemLeft" align="right" valign="top">static constexpr std::array&lt; <a class="el" href="structgridfire_1_1rates_1_1weak_1_1_rate_data_row.html">RateDataRow</a>, 77400 &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac48364695089056d9a9b10689c4338e7">UNIFIED_WEAK_DATA</a></td></tr>
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-<tr class="memitem:a7a262a98e1956c33645bad4eb4e40c7a" id="r_a7a262a98e1956c33645bad4eb4e40c7a"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; <a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a3fc4243d5c894779b986110c3a1ee1d4">InterpolationErrorType</a>, std::string_view &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a7a262a98e1956c33645bad4eb4e40c7a">InterpolationErrorTypeMap</a></td></tr>
-<tr class="memdesc:a7a262a98e1956c33645bad4eb4e40c7a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Human-readable names for InterpolationErrorType.  <br /></td></tr>
+<tr class="memitem:a7a262a98e1956c33645bad4eb4e40c7a" id="r_a7a262a98e1956c33645bad4eb4e40c7a"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; <a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4">InterpolationErrorType</a>, std::string_view &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7a262a98e1956c33645bad4eb4e40c7a">InterpolationErrorTypeMap</a></td></tr>
+<tr class="memdesc:a7a262a98e1956c33645bad4eb4e40c7a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Human-readable names for <a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4" title="Error categories for interpolation attempts.">InterpolationErrorType</a>.  <br /></td></tr>
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+          <td class="memname">enum class <a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4">gridfire::rates::weak::InterpolationErrorType</a></td>
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+          <td class="memname">enum class <a class="el" href="#aeddc9527afbf9755d4252f64ad5d70ca">gridfire::rates::weak::NeutrinoTypes</a></td>
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+          <td class="memname">enum class <a class="el" href="#a5e6ecdf02b9748cf1b0a15a5cc1b34ae">gridfire::rates::weak::TableAxes</a></td>
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+          <td class="memname">enum class <a class="el" href="#a15ca7b1a1951c131fddb9eb011d59550">gridfire::rates::weak::WeakMapError</a></td>
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-<p>Lookup errors for <a class="el" href="classgridfire_1_1rates_1_1weak_1_1WeakReactionMap.html" title="Index of available weak reactions keyed by species.">WeakReactionMap</a> queries. </p>
+<p>Lookup errors for <a class="el" href="classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html" title="Index of available weak reactions keyed by species.">WeakReactionMap</a> queries. </p>
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+          <td class="memname">enum class <a class="el" href="#ae834fb6f8cd1ac922967d5296a25bec7">gridfire::rates::weak::WeakReactionType</a></td>
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-          <td class="memname">constexpr std::string_view gridfire::rates::weak::weak_reaction_type_name </td>
+          <td class="memname">std::string_view gridfire::rates::weak::weak_reaction_type_name </td>
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-          <td class="paramname"><em>t</em></td><td>)</td>
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+          <td class="memname">std::unordered_map&lt;<a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4">InterpolationErrorType</a>, std::string_view&gt; gridfire::rates::weak::InterpolationErrorTypeMap</td>
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 <b>Initial value:</b><div class="fragment"><div class="line">= {</div>
-<div class="line">        {InterpolationErrorType::BOUNDS_ERROR, <span class="stringliteral">&quot;Bounds Error&quot;</span>},</div>
-<div class="line">        {InterpolationErrorType::UNKNOWN_SPECIES_ERROR, <span class="stringliteral">&quot;Unknown Species Error&quot;</span>},</div>
-<div class="line">        {InterpolationErrorType::UNKNOWN_ERROR, <span class="stringliteral">&quot;Unknown Error&quot;</span>}</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a3fc4243d5c894779b986110c3a1ee1d4a1516ba0949425312ba92ea385c80dc7a">InterpolationErrorType::BOUNDS_ERROR</a>, <span class="stringliteral">&quot;Bounds Error&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a3fc4243d5c894779b986110c3a1ee1d4acc038b1c5dbfcede2eaa525fe0e2379d">InterpolationErrorType::UNKNOWN_SPECIES_ERROR</a>, <span class="stringliteral">&quot;Unknown Species Error&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a3fc4243d5c894779b986110c3a1ee1d4a9a10f345b0f755d461a8673a5e9ef6b4">InterpolationErrorType::UNKNOWN_ERROR</a>, <span class="stringliteral">&quot;Unknown Error&quot;</span>}</div>
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+<div class="ttc" id="anamespacegridfire_1_1rates_1_1weak_html_a3fc4243d5c894779b986110c3a1ee1d4a1516ba0949425312ba92ea385c80dc7a"><div class="ttname"><a href="#a3fc4243d5c894779b986110c3a1ee1d4a1516ba0949425312ba92ea385c80dc7a">gridfire::rates::weak::InterpolationErrorType::BOUNDS_ERROR</a></div><div class="ttdeci">@ BOUNDS_ERROR</div><div class="ttdoc">Query outside the per-axis min/max of the table.</div><div class="ttdef"><b>Definition</b> weak_types.h:114</div></div>
+<div class="ttc" id="anamespacegridfire_1_1rates_1_1weak_html_a3fc4243d5c894779b986110c3a1ee1d4a9a10f345b0f755d461a8673a5e9ef6b4"><div class="ttname"><a href="#a3fc4243d5c894779b986110c3a1ee1d4a9a10f345b0f755d461a8673a5e9ef6b4">gridfire::rates::weak::InterpolationErrorType::UNKNOWN_ERROR</a></div><div class="ttdeci">@ UNKNOWN_ERROR</div><div class="ttdef"><b>Definition</b> weak_types.h:116</div></div>
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 </div><!-- fragment -->
-<p>Human-readable names for InterpolationErrorType. </p>
+<p>Human-readable names for <a class="el" href="#a3fc4243d5c894779b986110c3a1ee1d4" title="Error categories for interpolation attempts.">InterpolationErrorType</a>. </p>
 
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+    [ "WeakReaction", "classgridfire_1_1rates_1_1weak_1_1_weak_reaction.html", "classgridfire_1_1rates_1_1weak_1_1_weak_reaction" ],
+    [ "WeakReactionEntry", "structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html", "structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry" ],
+    [ "WeakReactionMap", "classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map.html", "classgridfire_1_1rates_1_1weak_1_1_weak_reaction_map" ],
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-          <td class="paramname"><em>str</em></td><td>)</td>
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 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="enum-members" name="enum-members"></a>
 Enumerations</h2></td></tr>
-<tr class="memitem:a026997f11e811fa7754ac9121c4ba74e" id="r_a026997f11e811fa7754ac9121c4ba74e"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a> { <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74ea32c7d8943bec86a6d7d5e03598670ca8">WEAK</a>
-, <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74eaf9885ed04411bef7b70f78b643c6a220">REACLIB</a>
-, <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74eab736eb13fff62c962f63232ec57f2692">REACLIB_WEAK</a>
-, <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74ea32b0fb6c82a2ec42865b2c823216baa9">LOGICAL_REACLIB</a>
+<tr class="memitem:a026997f11e811fa7754ac9121c4ba74e" id="r_a026997f11e811fa7754ac9121c4ba74e"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a> { <br />
+&#160;&#160;<a class="el" href="#a026997f11e811fa7754ac9121c4ba74ea32c7d8943bec86a6d7d5e03598670ca8">WEAK</a>
+, <a class="el" href="#a026997f11e811fa7754ac9121c4ba74eaf9885ed04411bef7b70f78b643c6a220">REACLIB</a>
+, <a class="el" href="#a026997f11e811fa7754ac9121c4ba74eab736eb13fff62c962f63232ec57f2692">REACLIB_WEAK</a>
+, <a class="el" href="#a026997f11e811fa7754ac9121c4ba74ea32b0fb6c82a2ec42865b2c823216baa9">LOGICAL_REACLIB</a>
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74ea9259a6415351c8baa03c61926bdd5b0c">LOGICAL_REACLIB_WEAK</a>
+&#160;&#160;<a class="el" href="#a026997f11e811fa7754ac9121c4ba74ea9259a6415351c8baa03c61926bdd5b0c">LOGICAL_REACLIB_WEAK</a>
 <br />
  }</td></tr>
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 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
-<tr class="memitem:a5f8afcf8ff8dc0acdb510ae621d655be" id="r_a5f8afcf8ff8dc0acdb510ae621d655be"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1reaction.html#a5f8afcf8ff8dc0acdb510ae621d655be">reaction_is_weak</a> (const <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html">Reaction</a> &amp;reaction)</td></tr>
+<tr class="memitem:a5f8afcf8ff8dc0acdb510ae621d655be" id="r_a5f8afcf8ff8dc0acdb510ae621d655be"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5f8afcf8ff8dc0acdb510ae621d655be">reaction_is_weak</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;reaction)</td></tr>
 <tr class="separator:a5f8afcf8ff8dc0acdb510ae621d655be"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:af34403cccdb4a091e979f0f895be2f8c" id="r_af34403cccdb4a091e979f0f895be2f8c"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html">ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1reaction.html#af34403cccdb4a091e979f0f895be2f8c">packReactionSet</a> (const <a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html">ReactionSet</a> &amp;reactionSet)</td></tr>
+<tr class="memitem:af34403cccdb4a091e979f0f895be2f8c" id="r_af34403cccdb4a091e979f0f895be2f8c"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af34403cccdb4a091e979f0f895be2f8c">packReactionSet</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;reactionSet)</td></tr>
 <tr class="separator:af34403cccdb4a091e979f0f895be2f8c"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
 Variables</h2></td></tr>
-<tr class="memitem:ac06a7c50ac58fb2f901d778fc30cd1cf" id="r_ac06a7c50ac58fb2f901d778fc30cd1cf"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1reaction.html#ac06a7c50ac58fb2f901d778fc30cd1cf">ReactionTypeNames</a></td></tr>
+<tr class="memitem:ac06a7c50ac58fb2f901d778fc30cd1cf" id="r_ac06a7c50ac58fb2f901d778fc30cd1cf"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; <a class="el" href="#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac06a7c50ac58fb2f901d778fc30cd1cf">ReactionTypeNames</a></td></tr>
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-<tr class="memitem:a773ef58975dc959e4ae03e2e677ab54f" id="r_a773ef58975dc959e4ae03e2e677ab54f"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1reaction.html#a773ef58975dc959e4ae03e2e677ab54f">ReactionPhysicalTypeNames</a></td></tr>
+<tr class="memitem:a773ef58975dc959e4ae03e2e677ab54f" id="r_a773ef58975dc959e4ae03e2e677ab54f"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; <a class="el" href="#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a773ef58975dc959e4ae03e2e677ab54f">ReactionPhysicalTypeNames</a></td></tr>
 <tr class="separator:a773ef58975dc959e4ae03e2e677ab54f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Enumeration Type Documentation</h2>
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-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">gridfire::reaction::ReactionType</a></td>
+          <td class="memname">enum class <a class="el" href="#a026997f11e811fa7754ac9121c4ba74e">gridfire::reaction::ReactionType</a></td>
         </tr>
       </table>
   </td>
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-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -184,10 +191,9 @@ Variables</h2></td></tr>
 <div class="memproto">
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         <tr>
-          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html">ReactionSet</a> gridfire::reaction::packReactionSet </td>
+          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> gridfire::reaction::packReactionSet </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1ReactionSet.html">ReactionSet</a> &amp;&#160;</td>
-          <td class="paramname"><em>reactionSet</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactionSet</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -204,8 +210,7 @@ Variables</h2></td></tr>
         <tr>
           <td class="memname">bool gridfire::reaction::reaction_is_weak </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html">Reaction</a> &amp;&#160;</td>
-          <td class="paramname"><em>reaction</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -224,22 +229,27 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">std::unordered_map&lt;<a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string&gt; gridfire::reaction::ReactionPhysicalTypeNames</td>
+          <td class="memname">std::unordered_map&lt;<a class="el" href="#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string&gt; gridfire::reaction::ReactionPhysicalTypeNames</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">static</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span></span>  </td>
   </tr>
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 <b>Initial value:</b><div class="fragment"><div class="line">= {</div>
-<div class="line">        {ReactionType::WEAK, <span class="stringliteral">&quot;Weak&quot;</span>},</div>
-<div class="line">        {ReactionType::REACLIB, <span class="stringliteral">&quot;Strong&quot;</span>},</div>
-<div class="line">        {ReactionType::LOGICAL_REACLIB, <span class="stringliteral">&quot;Strong&quot;</span>},</div>
-<div class="line">        {ReactionType::REACLIB_WEAK, <span class="stringliteral">&quot;Weak&quot;</span>},</div>
-<div class="line">        {ReactionType::LOGICAL_REACLIB_WEAK, <span class="stringliteral">&quot;Weak&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74ea32c7d8943bec86a6d7d5e03598670ca8">ReactionType::WEAK</a>, <span class="stringliteral">&quot;Weak&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74eaf9885ed04411bef7b70f78b643c6a220">ReactionType::REACLIB</a>, <span class="stringliteral">&quot;Strong&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74ea32b0fb6c82a2ec42865b2c823216baa9">ReactionType::LOGICAL_REACLIB</a>, <span class="stringliteral">&quot;Strong&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74eab736eb13fff62c962f63232ec57f2692">ReactionType::REACLIB_WEAK</a>, <span class="stringliteral">&quot;Weak&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74ea9259a6415351c8baa03c61926bdd5b0c">ReactionType::LOGICAL_REACLIB_WEAK</a>, <span class="stringliteral">&quot;Weak&quot;</span>},</div>
 <div class="line">    }</div>
+<div class="ttc" id="anamespacegridfire_1_1reaction_html_a026997f11e811fa7754ac9121c4ba74ea32b0fb6c82a2ec42865b2c823216baa9"><div class="ttname"><a href="#a026997f11e811fa7754ac9121c4ba74ea32b0fb6c82a2ec42865b2c823216baa9">gridfire::reaction::ReactionType::LOGICAL_REACLIB</a></div><div class="ttdeci">@ LOGICAL_REACLIB</div><div class="ttdef"><b>Definition</b> reaction.h:30</div></div>
+<div class="ttc" id="anamespacegridfire_1_1reaction_html_a026997f11e811fa7754ac9121c4ba74ea32c7d8943bec86a6d7d5e03598670ca8"><div class="ttname"><a href="#a026997f11e811fa7754ac9121c4ba74ea32c7d8943bec86a6d7d5e03598670ca8">gridfire::reaction::ReactionType::WEAK</a></div><div class="ttdeci">@ WEAK</div><div class="ttdef"><b>Definition</b> reaction.h:27</div></div>
+<div class="ttc" id="anamespacegridfire_1_1reaction_html_a026997f11e811fa7754ac9121c4ba74ea9259a6415351c8baa03c61926bdd5b0c"><div class="ttname"><a href="#a026997f11e811fa7754ac9121c4ba74ea9259a6415351c8baa03c61926bdd5b0c">gridfire::reaction::ReactionType::LOGICAL_REACLIB_WEAK</a></div><div class="ttdeci">@ LOGICAL_REACLIB_WEAK</div><div class="ttdef"><b>Definition</b> reaction.h:31</div></div>
+<div class="ttc" id="anamespacegridfire_1_1reaction_html_a026997f11e811fa7754ac9121c4ba74eab736eb13fff62c962f63232ec57f2692"><div class="ttname"><a href="#a026997f11e811fa7754ac9121c4ba74eab736eb13fff62c962f63232ec57f2692">gridfire::reaction::ReactionType::REACLIB_WEAK</a></div><div class="ttdeci">@ REACLIB_WEAK</div><div class="ttdef"><b>Definition</b> reaction.h:29</div></div>
+<div class="ttc" id="anamespacegridfire_1_1reaction_html_a026997f11e811fa7754ac9121c4ba74eaf9885ed04411bef7b70f78b643c6a220"><div class="ttname"><a href="#a026997f11e811fa7754ac9121c4ba74eaf9885ed04411bef7b70f78b643c6a220">gridfire::reaction::ReactionType::REACLIB</a></div><div class="ttdeci">@ REACLIB</div><div class="ttdef"><b>Definition</b> reaction.h:28</div></div>
 </div><!-- fragment -->
 </div>
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@@ -253,21 +263,21 @@ Variables</h2></td></tr>
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-          <td class="memname">std::unordered_map&lt;<a class="el" href="namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string&gt; gridfire::reaction::ReactionTypeNames</td>
+          <td class="memname">std::unordered_map&lt;<a class="el" href="#a026997f11e811fa7754ac9121c4ba74e">ReactionType</a>, std::string&gt; gridfire::reaction::ReactionTypeNames</td>
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 <b>Initial value:</b><div class="fragment"><div class="line">= {</div>
-<div class="line">        {ReactionType::WEAK, <span class="stringliteral">&quot;weak&quot;</span>},</div>
-<div class="line">        {ReactionType::REACLIB, <span class="stringliteral">&quot;reaclib&quot;</span>},</div>
-<div class="line">        {ReactionType::REACLIB_WEAK, <span class="stringliteral">&quot;reaclib_weak&quot;</span>},</div>
-<div class="line">        {ReactionType::LOGICAL_REACLIB, <span class="stringliteral">&quot;logical_reaclib&quot;</span>},</div>
-<div class="line">        {ReactionType::LOGICAL_REACLIB_WEAK, <span class="stringliteral">&quot;logical_reaclib_weak&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74ea32c7d8943bec86a6d7d5e03598670ca8">ReactionType::WEAK</a>, <span class="stringliteral">&quot;weak&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74eaf9885ed04411bef7b70f78b643c6a220">ReactionType::REACLIB</a>, <span class="stringliteral">&quot;reaclib&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74eab736eb13fff62c962f63232ec57f2692">ReactionType::REACLIB_WEAK</a>, <span class="stringliteral">&quot;reaclib_weak&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74ea32b0fb6c82a2ec42865b2c823216baa9">ReactionType::LOGICAL_REACLIB</a>, <span class="stringliteral">&quot;logical_reaclib&quot;</span>},</div>
+<div class="line">        {<a class="code hl_enumvalue" href="#a026997f11e811fa7754ac9121c4ba74ea9259a6415351c8baa03c61926bdd5b0c">ReactionType::LOGICAL_REACLIB_WEAK</a>, <span class="stringliteral">&quot;logical_reaclib_weak&quot;</span>},</div>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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index 84ba88dc..82d88400 100644
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-    [ "RateCoefficientSet", "structgridfire_1_1reaction_1_1RateCoefficientSet.html", "structgridfire_1_1reaction_1_1RateCoefficientSet" ],
-    [ "ReaclibReaction", "classgridfire_1_1reaction_1_1ReaclibReaction.html", "classgridfire_1_1reaction_1_1ReaclibReaction" ],
-    [ "Reaction", "classgridfire_1_1reaction_1_1Reaction.html", "classgridfire_1_1reaction_1_1Reaction" ],
-    [ "ReactionSet", "classgridfire_1_1reaction_1_1ReactionSet.html", "classgridfire_1_1reaction_1_1ReactionSet" ],
-    [ "WeakReaclibReaction", "classgridfire_1_1reaction_1_1WeakReaclibReaction.html", "classgridfire_1_1reaction_1_1WeakReaclibReaction" ],
+    [ "LogicalReaclibReaction", "classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html", "classgridfire_1_1reaction_1_1_logical_reaclib_reaction" ],
+    [ "RateCoefficientSet", "structgridfire_1_1reaction_1_1_rate_coefficient_set.html", "structgridfire_1_1reaction_1_1_rate_coefficient_set" ],
+    [ "ReaclibReaction", "classgridfire_1_1reaction_1_1_reaclib_reaction.html", "classgridfire_1_1reaction_1_1_reaclib_reaction" ],
+    [ "Reaction", "classgridfire_1_1reaction_1_1_reaction.html", "classgridfire_1_1reaction_1_1_reaction" ],
+    [ "ReactionSet", "classgridfire_1_1reaction_1_1_reaction_set.html", "classgridfire_1_1reaction_1_1_reaction_set" ],
+    [ "WeakReaclibReaction", "classgridfire_1_1reaction_1_1_weak_reaclib_reaction.html", "classgridfire_1_1reaction_1_1_weak_reaclib_reaction" ],
     [ "ReactionType", "namespacegridfire_1_1reaction.html#a026997f11e811fa7754ac9121c4ba74e", [
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diff --git a/docs/html/namespacegridfire_1_1screening.html b/docs/html/namespacegridfire_1_1screening.html
index c84c233e..078ac84c 100644
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 <table class="memberdecls">
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1screening_1_1BareScreeningModel.html">BareScreeningModel</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A screening model that applies no screening effect.  <a href="classgridfire_1_1screening_1_1BareScreeningModel.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1screening_1_1_bare_screening_model.html">BareScreeningModel</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">A screening model that applies no screening effect.  <a href="classgridfire_1_1screening_1_1_bare_screening_model.html#details">More...</a><br /></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1screening_1_1_intermediate_screening_model.html">IntermediateScreeningModel</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1screening_1_1_screening_model.html">ScreeningModel</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">An abstract base class for plasma screening models.  <a href="classgridfire_1_1screening_1_1_screening_model.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1screening_1_1WeakScreeningModel.html">WeakScreeningModel</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Implements the weak screening model based on the Debye-Hückel approximation.  <a href="classgridfire_1_1screening_1_1WeakScreeningModel.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1screening_1_1_weak_screening_model.html">WeakScreeningModel</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Implements the weak screening model based on the Debye-Hückel approximation.  <a href="classgridfire_1_1screening_1_1_weak_screening_model.html#details">More...</a><br /></td></tr>
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-<tr class="separator:a95b9ab18f211cc0b81b05219ff92ecba"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ae7dd1a7ccb7bf3c05084094ab008d8a3"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+, <a class="el" href="#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">WEAK</a>
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+<tr class="memdesc:aa82aafbc4f8c28d0a75b60798e3a7d25"><td class="mdescLeft">&#160;</td><td class="mdescRight">Enumerates the available plasma screening models.  <a href="#aa82aafbc4f8c28d0a75b60798e3a7d25">More...</a><br /></td></tr>
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+<tr class="memitem:a6ca8556d27ac373e176f5b23437c416e" id="r_a6ca8556d27ac373e176f5b23437c416e"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1screening_1_1_screening_model.html">ScreeningModel</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6ca8556d27ac373e176f5b23437c416e">selectScreeningModel</a> (<a class="el" href="#aa82aafbc4f8c28d0a75b60798e3a7d25">ScreeningType</a> type)</td></tr>
 <tr class="memdesc:a6ca8556d27ac373e176f5b23437c416e"><td class="mdescLeft">&#160;</td><td class="mdescRight">A factory function to select and create a screening model.  <br /></td></tr>
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 </table>
 <h2 class="groupheader">Typedef Documentation</h2>
-<a id="a95b9ab18f211cc0b81b05219ff92ecba" name="a95b9ab18f211cc0b81b05219ff92ecba"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a95b9ab18f211cc0b81b05219ff92ecba">&#9670;&#160;</a></span>ADDouble</h2>
+<a id="ae7dd1a7ccb7bf3c05084094ab008d8a3" name="ae7dd1a7ccb7bf3c05084094ab008d8a3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae7dd1a7ccb7bf3c05084094ab008d8a3">&#9670;&#160;</a></span>ADDouble</h2>
 
 <div class="memitem">
 <div class="memproto">
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         <tr>
-          <td class="memname">typedef CppAD::AD&lt; double &gt; <a class="el" href="namespacegridfire_1_1screening.html#a95b9ab18f211cc0b81b05219ff92ecba">gridfire::screening::ADDouble</a></td>
+          <td class="memname">typedef CppAD::AD&lt; double &gt; <a class="el" href="#ae7dd1a7ccb7bf3c05084094ab008d8a3">gridfire::screening::ADDouble</a> = CppAD::AD&lt;double&gt;</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -160,12 +167,12 @@ Functions</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
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-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">gridfire::screening::ScreeningType</a></td>
+          <td class="memname">enum class <a class="el" href="#aa82aafbc4f8c28d0a75b60798e3a7d25">gridfire::screening::ScreeningType</a></td>
         </tr>
       </table>
   </td>
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-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
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@@ -196,38 +203,37 @@ Functions</h2></td></tr>
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1screening_1_1ScreeningModel.html">ScreeningModel</a> &gt; gridfire::screening::selectScreeningModel </td>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1screening_1_1_screening_model.html">ScreeningModel</a> &gt; gridfire::screening::selectScreeningModel </td>
           <td>(</td>
-          <td class="paramtype"><a class="el" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25">ScreeningType</a>&#160;</td>
-          <td class="paramname"><em>type</em></td><td>)</td>
+          <td class="paramtype"><a class="el" href="#aa82aafbc4f8c28d0a75b60798e3a7d25">ScreeningType</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 <p>A factory function to select and create a screening model. </p>
-<p>This function returns a <code>std::unique_ptr</code> to a concrete implementation of the <code><a class="el" href="classgridfire_1_1screening_1_1ScreeningModel.html" title="An abstract base class for plasma screening models.">ScreeningModel</a></code> abstract base class, based on the specified <code>ScreeningType</code>. This allows for easy switching between different screening prescriptions at runtime.</p>
+<p>This function returns a <code>std::unique_ptr</code> to a concrete implementation of the <code><a class="el" href="classgridfire_1_1screening_1_1_screening_model.html" title="An abstract base class for plasma screening models.">ScreeningModel</a></code> abstract base class, based on the specified <code><a class="el" href="#aa82aafbc4f8c28d0a75b60798e3a7d25" title="Enumerates the available plasma screening models.">ScreeningType</a></code>. This allows for easy switching between different screening prescriptions at runtime.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
-    <tr><td class="paramname">type</td><td>The <code>ScreeningType</code> enum value specifying which model to create. </td></tr>
+    <tr><td class="paramname">type</td><td>The <code><a class="el" href="#aa82aafbc4f8c28d0a75b60798e3a7d25" title="Enumerates the available plasma screening models.">ScreeningType</a></code> enum value specifying which model to create. </td></tr>
   </table>
   </dd>
 </dl>
-<dl class="section return"><dt>Returns</dt><dd>A <code>std::unique_ptr&lt;<a class="el" href="classgridfire_1_1screening_1_1ScreeningModel.html" title="An abstract base class for plasma screening models.">ScreeningModel</a>&gt;</code> holding an instance of the requested screening model.</dd></dl>
-<p><b>Algorithm</b> The function uses a <code>switch</code> statement to determine which concrete model to instantiate. If the provided <code>type</code> does not match a known case, it defaults to creating a <code><a class="el" href="classgridfire_1_1screening_1_1BareScreeningModel.html" title="A screening model that applies no screening effect.">BareScreeningModel</a></code> to ensure safe behavior.</p>
+<dl class="section return"><dt>Returns</dt><dd>A <code>std::unique_ptr&lt;<a class="el" href="classgridfire_1_1screening_1_1_screening_model.html" title="An abstract base class for plasma screening models.">ScreeningModel</a>&gt;</code> holding an instance of the requested screening model.</dd></dl>
+<p><b>Algorithm</b> The function uses a <code>switch</code> statement to determine which concrete model to instantiate. If the provided <code>type</code> does not match a known case, it defaults to creating a <code><a class="el" href="classgridfire_1_1screening_1_1_bare_screening_model.html" title="A screening model that applies no screening effect.">BareScreeningModel</a></code> to ensure safe behavior.</p>
 <p><b>Post-conditions</b> </p><ul>
-<li>A non-null <code>std::unique_ptr&lt;<a class="el" href="classgridfire_1_1screening_1_1ScreeningModel.html" title="An abstract base class for plasma screening models.">ScreeningModel</a>&gt;</code> is always returned.</li>
+<li>A non-null <code>std::unique_ptr&lt;<a class="el" href="classgridfire_1_1screening_1_1_screening_model.html" title="An abstract base class for plasma screening models.">ScreeningModel</a>&gt;</code> is always returned.</li>
 </ul>
 <p><b>Usage</b> </p><div class="fragment"><div class="line"><span class="comment">// Select the weak screening model</span></div>
-<div class="line"><span class="keyword">auto</span> screening_model = <a class="code hl_function" href="namespacegridfire_1_1screening.html#a6ca8556d27ac373e176f5b23437c416e">gridfire::screening::selectScreeningModel</a>(<a class="code hl_enumvalue" href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">gridfire::screening::ScreeningType::WEAK</a>);</div>
+<div class="line"><span class="keyword">auto</span> screening_model = <a class="code hl_function" href="#a6ca8556d27ac373e176f5b23437c416e">gridfire::screening::selectScreeningModel</a>(<a class="code hl_enumvalue" href="#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">gridfire::screening::ScreeningType::WEAK</a>);</div>
 <div class="line"> </div>
 <div class="line"><span class="comment">// Use the model to calculate screening factors</span></div>
 <div class="line"><span class="comment">// (assuming other parameters are initialized)</span></div>
 <div class="line">std::vector&lt;double&gt; factors = screening_model-&gt;calculateScreeningFactors(</div>
 <div class="line">    reactions, species, Y, T9, rho</div>
 <div class="line">);</div>
-<div class="ttc" id="anamespacegridfire_1_1screening_html_a6ca8556d27ac373e176f5b23437c416e"><div class="ttname"><a href="namespacegridfire_1_1screening.html#a6ca8556d27ac373e176f5b23437c416e">gridfire::screening::selectScreeningModel</a></div><div class="ttdeci">std::unique_ptr&lt; ScreeningModel &gt; selectScreeningModel(ScreeningType type)</div><div class="ttdoc">A factory function to select and create a screening model.</div><div class="ttdef"><b>Definition</b> screening_types.cpp:9</div></div>
-<div class="ttc" id="anamespacegridfire_1_1screening_html_aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8"><div class="ttname"><a href="namespacegridfire_1_1screening.html#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">gridfire::screening::ScreeningType::WEAK</a></div><div class="ttdeci">@ WEAK</div><div class="ttdoc">Weak screening model (Salpeter, 1954).</div></div>
+<div class="ttc" id="anamespacegridfire_1_1screening_html_a6ca8556d27ac373e176f5b23437c416e"><div class="ttname"><a href="#a6ca8556d27ac373e176f5b23437c416e">gridfire::screening::selectScreeningModel</a></div><div class="ttdeci">std::unique_ptr&lt; ScreeningModel &gt; selectScreeningModel(ScreeningType type)</div><div class="ttdoc">A factory function to select and create a screening model.</div><div class="ttdef"><b>Definition</b> screening_types.cpp:9</div></div>
+<div class="ttc" id="anamespacegridfire_1_1screening_html_aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8"><div class="ttname"><a href="#aa82aafbc4f8c28d0a75b60798e3a7d25a32c7d8943bec86a6d7d5e03598670ca8">gridfire::screening::ScreeningType::WEAK</a></div><div class="ttdeci">@ WEAK</div><div class="ttdoc">Weak screening model (Salpeter, 1954).</div><div class="ttdef"><b>Definition</b> screening_types.h:35</div></div>
 </div><!-- fragment --> 
 </div>
 </div>
@@ -237,7 +243,7 @@ Functions</h2></td></tr>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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 <h2 class="groupheader">Typedef Documentation</h2>
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-<h2 class="memtitle"><span class="permalink"><a href="#aa32e3cd33f25e8743556a54b6847cdc0">&#9670;&#160;</a></span>DynamicNetworkSolverStrategy</h2>
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+          <td class="memname">using <a class="el" href="#a521165ce7610e3438607af6500f82fdd">gridfire::solver::MultiZoneDynamicNetworkSolver</a> = <a class="el" href="classgridfire_1_1solver_1_1_multi_zone_network_solver.html">MultiZoneNetworkSolver</a>&lt;<a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a>&gt;</td>
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-<p>Type alias for a network solver strategy that uses a DynamicEngine. </p>
+</div>
+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a3ba32e30d3e30cbbca5ffb22dff077ee">&#9670;&#160;</a></span>SingleZoneDynamicNetworkSolver</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">using <a class="el" href="#a3ba32e30d3e30cbbca5ffb22dff077ee">gridfire::solver::SingleZoneDynamicNetworkSolver</a> = <a class="el" href="classgridfire_1_1solver_1_1_single_zone_network_solver.html">SingleZoneNetworkSolver</a>&lt;<a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a>&gt;</td>
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+      </table>
+</div><div class="memdoc">
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+<p>Type alias for a network solver strategy that uses a <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a>. </p>
+
+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a472214bac45251c72c311af1d615e6ea">&#9670;&#160;</a></span>TimestepCallback</h2>
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+<div class="memitem">
+<div class="memproto">
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+        </tr>
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+<p>Type alias for a timestep callback function. </p>
 
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-    [ "NetworkSolverStrategy", "classgridfire_1_1solver_1_1NetworkSolverStrategy.html", "classgridfire_1_1solver_1_1NetworkSolverStrategy" ],
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-    [ "DynamicNetworkSolverStrategy", "namespacegridfire_1_1solver.html#aa32e3cd33f25e8743556a54b6847cdc0", null ]
+    [ "GridSolver", "classgridfire_1_1solver_1_1_grid_solver.html", "classgridfire_1_1solver_1_1_grid_solver" ],
+    [ "GridSolverContext", "structgridfire_1_1solver_1_1_grid_solver_context.html", "structgridfire_1_1solver_1_1_grid_solver_context" ],
+    [ "MultiZoneNetworkSolver", "classgridfire_1_1solver_1_1_multi_zone_network_solver.html", "classgridfire_1_1solver_1_1_multi_zone_network_solver" ],
+    [ "PointSolver", "classgridfire_1_1solver_1_1_point_solver.html", "classgridfire_1_1solver_1_1_point_solver" ],
+    [ "PointSolverContext", "structgridfire_1_1solver_1_1_point_solver_context.html", "structgridfire_1_1solver_1_1_point_solver_context" ],
+    [ "PointSolverTimestepContext", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html", "structgridfire_1_1solver_1_1_point_solver_timestep_context" ],
+    [ "SingleZoneNetworkSolver", "classgridfire_1_1solver_1_1_single_zone_network_solver.html", "classgridfire_1_1solver_1_1_single_zone_network_solver" ],
+    [ "SolverContextBase", "structgridfire_1_1solver_1_1_solver_context_base.html", "structgridfire_1_1solver_1_1_solver_context_base" ],
+    [ "TimestepContextBase", "classgridfire_1_1solver_1_1_timestep_context_base.html", "classgridfire_1_1solver_1_1_timestep_context_base" ],
+    [ "IsEngine", "conceptgridfire_1_1solver_1_1_is_engine.html", null ],
+    [ "MultiZoneDynamicNetworkSolver", "namespacegridfire_1_1solver.html#a521165ce7610e3438607af6500f82fdd", null ],
+    [ "SingleZoneDynamicNetworkSolver", "namespacegridfire_1_1solver.html#a3ba32e30d3e30cbbca5ffb22dff077ee", null ],
+    [ "TimestepCallback", "namespacegridfire_1_1solver.html#a472214bac45251c72c311af1d615e6ea", null ]
 ];
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+<script type="text/javascript" src="clipboard.js"></script>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
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 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
 Namespaces</h2></td></tr>
-<tr class="memitem:namespacegridfire_1_1trigger_1_1solver" id="r_namespacegridfire_1_1trigger_1_1solver"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1trigger_1_1solver.html">solver</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1trigger_1_1solver.html">solver</a></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1AndTrigger.html">AndTrigger</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Logical conjunction of two triggers with short-circuit evaluation.  <a href="classgridfire_1_1trigger_1_1AndTrigger.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_and_trigger.html">AndTrigger</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Logical conjunction of two triggers with short-circuit evaluation.  <a href="classgridfire_1_1trigger_1_1_and_trigger.html#details">More...</a><br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1EveryNthTrigger.html">EveryNthTrigger</a></td></tr>
-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Pass-through trigger that fires every Nth time its child trigger is true.  <a href="classgridfire_1_1trigger_1_1EveryNthTrigger.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html">EveryNthTrigger</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Pass-through trigger that fires every Nth time its child trigger is true.  <a href="classgridfire_1_1trigger_1_1_every_nth_trigger.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1LogicalTrigger.html">LogicalTrigger</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_logical_trigger.html">LogicalTrigger</a></td></tr>
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-<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Logical negation of a trigger.  <a href="classgridfire_1_1trigger_1_1NotTrigger.html#details">More...</a><br /></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_not_trigger.html">NotTrigger</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Logical negation of a trigger.  <a href="classgridfire_1_1trigger_1_1_not_trigger.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1OrTrigger.html">OrTrigger</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html">OrTrigger</a></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1Trigger.html">Trigger</a></td></tr>
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+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">Trigger</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generic trigger interface for signaling events/conditions during integration.  <a href="classgridfire_1_1trigger_1_1_trigger.html#details">More...</a><br /></td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1trigger_1_1TriggerResult.html">TriggerResult</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a></td></tr>
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-<tr class="memdesc:a5e0fe21f3356426f26b109cdeb1edcd9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Pretty-print a <a class="el" href="structgridfire_1_1trigger_1_1TriggerResult.html">TriggerResult</a> explanation tree to std::cout.  <br /></td></tr>
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+<tr class="memdesc:a5e0fe21f3356426f26b109cdeb1edcd9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Pretty-print a <a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> explanation tree to std::cout.  <br /></td></tr>
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-          <td class="paramname"><em>result</em>, </td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>result</em></span>, </td>
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-        </tr>
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-          <td></td>
-          <td>)</td>
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+          <td class="paramtype">const int</td>          <td class="paramname"><span class="paramname"><em>indent</em></span><span class="paramdefsep"> = </span><span class="paramdefval">0</span>&#160;)</td>
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-<p>Pretty-print a <a class="el" href="structgridfire_1_1trigger_1_1TriggerResult.html">TriggerResult</a> explanation tree to std::cout. </p>
+<p>Pretty-print a <a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> explanation tree to std::cout. </p>
 <p>Prints one line per node prefixed with Unicode bullets and indentation to visualize the explanation hierarchy. Each line shows [TRUE|FALSE], the node name, and description.</p>
 <dl class="params"><dt>Parameters</dt><dd>
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-    <tr><td class="paramname">result</td><td>Root <a class="el" href="structgridfire_1_1trigger_1_1TriggerResult.html">TriggerResult</a> to print. </td></tr>
+    <tr><td class="paramname">result</td><td>Root <a class="el" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> to print. </td></tr>
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-<div class="line"><a class="code hl_struct" href="structgridfire_1_1trigger_1_1TriggerResult.html">TriggerResult</a> leaf{<span class="stringliteral">&quot;A&gt;5&quot;</span>, <span class="stringliteral">&quot;Threshold passed&quot;</span>, <span class="keyword">true</span>, {}};</div>
+<dl class="section user"><dt>Example</dt><dd><div class="fragment"><div class="line"><span class="keyword">using </span><a class="code hl_struct" href="structgridfire_1_1trigger_1_1_trigger_result.html">gridfire::trigger::TriggerResult</a>;</div>
+<div class="line"><a class="code hl_struct" href="structgridfire_1_1trigger_1_1_trigger_result.html">TriggerResult</a> leaf{<span class="stringliteral">&quot;A&gt;5&quot;</span>, <span class="stringliteral">&quot;Threshold passed&quot;</span>, <span class="keyword">true</span>, {}};</div>
 <div class="line">TriggerResult root{<span class="stringliteral">&quot;AND&quot;</span>, <span class="stringliteral">&quot;Both conditions true&quot;</span>, <span class="keyword">true</span>, {leaf}};</div>
-<div class="line"><a class="code hl_function" href="namespacegridfire_1_1trigger.html#a5e0fe21f3356426f26b109cdeb1edcd9">gridfire::trigger::printWhy</a>(root);</div>
-<div class="ttc" id="anamespacegridfire_1_1trigger_html_a5e0fe21f3356426f26b109cdeb1edcd9"><div class="ttname"><a href="namespacegridfire_1_1trigger.html#a5e0fe21f3356426f26b109cdeb1edcd9">gridfire::trigger::printWhy</a></div><div class="ttdeci">void printWhy(const TriggerResult &amp;result, const int indent=0)</div><div class="ttdoc">Pretty-print a TriggerResult explanation tree to std::cout.</div><div class="ttdef"><b>Definition</b> trigger_pprint.h:26</div></div>
-<div class="ttc" id="astructgridfire_1_1trigger_1_1TriggerResult_html"><div class="ttname"><a href="structgridfire_1_1trigger_1_1TriggerResult.html">gridfire::trigger::TriggerResult</a></div><div class="ttdef"><b>Definition</b> trigger_result.h:23</div></div>
+<div class="line"><a class="code hl_function" href="#a5e0fe21f3356426f26b109cdeb1edcd9">gridfire::trigger::printWhy</a>(root);</div>
+<div class="ttc" id="anamespacegridfire_1_1trigger_html_a5e0fe21f3356426f26b109cdeb1edcd9"><div class="ttname"><a href="#a5e0fe21f3356426f26b109cdeb1edcd9">gridfire::trigger::printWhy</a></div><div class="ttdeci">void printWhy(const TriggerResult &amp;result, const int indent=0)</div><div class="ttdoc">Pretty-print a TriggerResult explanation tree to std::cout.</div><div class="ttdef"><b>Definition</b> trigger_pprint.h:26</div></div>
+<div class="ttc" id="astructgridfire_1_1trigger_1_1_trigger_result_html"><div class="ttname"><a href="structgridfire_1_1trigger_1_1_trigger_result.html">gridfire::trigger::TriggerResult</a></div><div class="ttdef"><b>Definition</b> trigger_result.h:23</div></div>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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index 587e9522..e5dcc177 100644
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@@ -1,12 +1,12 @@
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-    [ "OrTrigger", "classgridfire_1_1trigger_1_1OrTrigger.html", "classgridfire_1_1trigger_1_1OrTrigger" ],
-    [ "Trigger", "classgridfire_1_1trigger_1_1Trigger.html", "classgridfire_1_1trigger_1_1Trigger" ],
-    [ "TriggerResult", "structgridfire_1_1trigger_1_1TriggerResult.html", "structgridfire_1_1trigger_1_1TriggerResult" ],
+    [ "AndTrigger", "classgridfire_1_1trigger_1_1_and_trigger.html", "classgridfire_1_1trigger_1_1_and_trigger" ],
+    [ "EveryNthTrigger", "classgridfire_1_1trigger_1_1_every_nth_trigger.html", "classgridfire_1_1trigger_1_1_every_nth_trigger" ],
+    [ "LogicalTrigger", "classgridfire_1_1trigger_1_1_logical_trigger.html", null ],
+    [ "NotTrigger", "classgridfire_1_1trigger_1_1_not_trigger.html", "classgridfire_1_1trigger_1_1_not_trigger" ],
+    [ "OrTrigger", "classgridfire_1_1trigger_1_1_or_trigger.html", "classgridfire_1_1trigger_1_1_or_trigger" ],
+    [ "Trigger", "classgridfire_1_1trigger_1_1_trigger.html", "classgridfire_1_1trigger_1_1_trigger" ],
+    [ "TriggerResult", "structgridfire_1_1trigger_1_1_trigger_result.html", "structgridfire_1_1trigger_1_1_trigger_result" ],
     [ "printWhy", "namespacegridfire_1_1trigger.html#a5e0fe21f3356426f26b109cdeb1edcd9", null ]
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+<meta name="generator" content="Doxygen 1.13.2"/>
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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-    [ "CVODE", "namespacegridfire_1_1trigger_1_1solver_1_1CVODE.html", "namespacegridfire_1_1trigger_1_1solver_1_1CVODE" ]
+    [ "CVODE", "namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html", "namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e" ]
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-<tr class="memdesc:aa2e951d13f36bb742fd27b83caa6d4d5"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compose a trigger suitable for deciding engine re-partitioning during <a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html">CVODE</a> solves.  <br /></td></tr>
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+<tr class="memdesc:a0e69d41f7cc0095b9bf7313ec436ab54"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compose a trigger suitable for deciding engine re-partitioning during <a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html">CVODE</a> solves.  <br /></td></tr>
+<tr class="separator:a0e69d41f7cc0095b9bf7313ec436ab54"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Function Documentation</h2>
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-<h2 class="memtitle"><span class="permalink"><a href="#aa2e951d13f36bb742fd27b83caa6d4d5">&#9670;&#160;</a></span>makeEnginePartitioningTrigger()</h2>
+<a id="a0e69d41f7cc0095b9bf7313ec436ab54" name="a0e69d41f7cc0095b9bf7313ec436ab54"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0e69d41f7cc0095b9bf7313ec436ab54">&#9670;&#160;</a></span>makeEnginePartitioningTrigger()</h2>
 
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+          <td class="memname">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html">Trigger</a>&lt; <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a> &gt; &gt; gridfire::trigger::solver::CVODE::makeEnginePartitioningTrigger </td>
           <td>(</td>
-          <td class="paramtype">const double</td>          <td class="paramname"><span class="paramname"><em>simulationTimeInterval</em></span>, </td>
-        </tr>
-        <tr>
-          <td class="paramkey"></td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1config_1_1_trigger_config.html">config::TriggerConfig</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>cfg</em></span></td><td>)</td>
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-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
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-        </tr>
-        <tr>
-          <td class="paramkey"></td>
-          <td></td>
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       timestepGrowthRelative, timestepGrowthWindowSize)</li>
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 <p>See <a class="el" href="engine__partitioning__trigger_8cpp.html">engine_partitioning_trigger.cpp</a> for construction details using <a class="el" href="classgridfire_1_1trigger_1_1_or_trigger.html" title="Logical disjunction of two triggers with short-circuit evaluation.">OrTrigger</a> and <a class="el" href="classgridfire_1_1trigger_1_1_every_nth_trigger.html" title="Pass-through trigger that fires every Nth time its child trigger is true.">EveryNthTrigger</a> from <a class="el" href="trigger__logical_8h.html" title="Combinators for composing triggers with boolean logic (AND/OR/NOT/EveryNth).">trigger_logical.h</a>.</p>
-<dl class="params"><dt>Parameters</dt><dd>
-  <table class="params">
-    <tr><td class="paramname">simulationTimeInterval</td><td>Interval used by <a class="el" href="classgridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e_1_1_simulation_time_trigger.html" title="Triggers when the current simulation time advances by at least a fixed interval.">SimulationTimeTrigger</a> (&gt; 0). </td></tr>
-    <tr><td class="paramname">offDiagonalThreshold</td><td>Off-diagonal Jacobian magnitude threshold (&gt;= 0). </td></tr>
-    <tr><td class="paramname">timestepCollapseRatio</td><td>Threshold for timestep deviation (&gt;= 0, and &lt;= 1 when relative). </td></tr>
-    <tr><td class="paramname">maxConvergenceFailures</td><td>Window size for timestep averaging (&gt;= 1 recommended). </td></tr>
-  </table>
-  </dd>
-</dl>
 <dl class="section return"><dt>Returns</dt><dd>A unique_ptr to a composed <a class="el" href="classgridfire_1_1trigger_1_1_trigger.html" title="Generic trigger interface for signaling events/conditions during integration.">Trigger&lt;TimestepContext&gt;</a> implementing the policy above.</dd></dl>
 <dl class="section note"><dt>Note</dt><dd>The exact policy is subject to change; this function centralizes that decision. </dd></dl>
 
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-    [ "makeEnginePartitioningTrigger", "namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html#aa2e951d13f36bb742fd27b83caa6d4d5", null ]
+    [ "makeEnginePartitioningTrigger", "namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html#a0e69d41f7cc0095b9bf7313ec436ab54", null ]
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 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
-<tr class="memitem:a0dc0b71ddae108a47887458c2f3f780e" id="r_a0dc0b71ddae108a47887458c2f3f780e"><td class="memItemLeft" align="right" valign="top">uint_fast32_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1utils.html#a0dc0b71ddae108a47887458c2f3f780e">hash_atomic</a> (const uint16_t a, const uint8_t z) noexcept</td></tr>
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 <tr class="memdesc:a0dc0b71ddae108a47887458c2f3f780e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Generate a unique hash for an isotope given its mass number (A) and atomic number (Z).  <br /></td></tr>
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-<tr class="memitem:a3d0646bcc1a6fd8df22ac0c758bfd5c4" id="r_a3d0646bcc1a6fd8df22ac0c758bfd5c4"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1utils.html#a3d0646bcc1a6fd8df22ac0c758bfd5c4">formatNuclearTimescaleLogString</a> (const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">engine::DynamicEngine</a> &amp;engine, const fourdst::composition::Composition &amp;composition, double T9, double rho)</td></tr>
-<tr class="memdesc:a3d0646bcc1a6fd8df22ac0c758bfd5c4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Formats a map of nuclear species timescales into a human-readable string.  <br /></td></tr>
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+<tr class="separator:aafc480c1ff1fd3d3a451d9abeed5d511"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:ab1cdad5a93d4674e902861917ae7fd6b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Formats a map of nuclear species timescales into a human-readable string.  <br /></td></tr>
+<tr class="separator:ab1cdad5a93d4674e902861917ae7fd6b"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:af9f382b1b40867c1e70f062d7fba90cd" id="r_af9f382b1b40867c1e70f062d7fba90cd"><td class="memItemLeft" align="right" valign="top">nlohmann::json&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af9f382b1b40867c1e70f062d7fba90cd">to_json</a> (const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1_column_base.html">ColumnBase</a> &gt; &gt; &amp;columns)</td></tr>
 <tr class="separator:af9f382b1b40867c1e70f062d7fba90cd"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:adf613180bab406ef2bfbb9b79397148e" id="r_adf613180bab406ef2bfbb9b79397148e"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1utils.html#adf613180bab406ef2bfbb9b79397148e">to_json_file</a> (const std::string &amp;filename, const std::vector&lt; std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1ColumnBase.html">ColumnBase</a> &gt; &gt; &gt; &amp;tables, const std::vector&lt; std::string &gt; &amp;tableNames)</td></tr>
+<tr class="memitem:adf613180bab406ef2bfbb9b79397148e" id="r_adf613180bab406ef2bfbb9b79397148e"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#adf613180bab406ef2bfbb9b79397148e">to_json_file</a> (const std::string &amp;filename, const std::vector&lt; std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1_column_base.html">ColumnBase</a> &gt; &gt; &gt; &amp;tables, const std::vector&lt; std::string &gt; &amp;tableNames)</td></tr>
 <tr class="separator:adf613180bab406ef2bfbb9b79397148e"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
 Variables</h2></td></tr>
-<tr class="memitem:a06d386929b2274e2593b97868be2ac51" id="r_a06d386929b2274e2593b97868be2ac51"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; int, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1utils.html#a06d386929b2274e2593b97868be2ac51">cvode_ret_code_map</a></td></tr>
+<tr class="memitem:a06d386929b2274e2593b97868be2ac51" id="r_a06d386929b2274e2593b97868be2ac51"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; int, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a06d386929b2274e2593b97868be2ac51">cvode_ret_code_map</a></td></tr>
 <tr class="separator:a06d386929b2274e2593b97868be2ac51"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a96fc2701cfd6cb8172282e9999fe4b34" id="r_a96fc2701cfd6cb8172282e9999fe4b34"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; int, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1utils.html#a96fc2701cfd6cb8172282e9999fe4b34">kinsol_ret_code_map</a></td></tr>
+<tr class="memitem:a96fc2701cfd6cb8172282e9999fe4b34" id="r_a96fc2701cfd6cb8172282e9999fe4b34"><td class="memItemLeft" align="right" valign="top">static std::unordered_map&lt; int, std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a96fc2701cfd6cb8172282e9999fe4b34">kinsol_ret_code_map</a></td></tr>
 <tr class="separator:a96fc2701cfd6cb8172282e9999fe4b34"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Enumeration Type Documentation</h2>
@@ -191,12 +202,12 @@ Variables</h2></td></tr>
   <td class="mlabels-left">
       <table class="memname">
         <tr>
-          <td class="memname">enum class <a class="el" href="namespacegridfire_1_1utils.html#a7cea622c9311bfd0f0b9d7b6298ea04e">gridfire::utils::SUNDIALS_RET_CODE_TYPES</a></td>
+          <td class="memname">enum class <a class="el" href="#a7cea622c9311bfd0f0b9d7b6298ea04e">gridfire::utils::SUNDIALS_RET_CODE_TYPES</a></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">strong</span></span>  </td>
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -220,24 +231,17 @@ Variables</h2></td></tr>
         <tr>
           <td class="memname">void gridfire::utils::check_cvode_flag </td>
           <td>(</td>
-          <td class="paramtype">const int&#160;</td>
-          <td class="paramname"><em>flag</em>, </td>
+          <td class="paramtype">const int</td>          <td class="paramname"><span class="paramname"><em>flag</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>func_name</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>func_name</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -256,30 +260,47 @@ Variables</h2></td></tr>
         <tr>
           <td class="memname">void gridfire::utils::check_sundials_flag </td>
           <td>(</td>
-          <td class="paramtype">const int&#160;</td>
-          <td class="paramname"><em>flag</em>, </td>
+          <td class="paramtype">const int</td>          <td class="paramname"><span class="paramname"><em>flag</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>func_name</em>, </td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>func_name</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1utils.html#a7cea622c9311bfd0f0b9d7b6298ea04e">SUNDIALS_RET_CODE_TYPES</a>&#160;</td>
-          <td class="paramname"><em>type</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const <a class="el" href="#a7cea622c9311bfd0f0b9d7b6298ea04e">SUNDIALS_RET_CODE_TYPES</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a41c5614fd788bee1061f628ad0085a21" name="a41c5614fd788bee1061f628ad0085a21"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a41c5614fd788bee1061f628ad0085a21">&#9670;&#160;</a></span>fast_mix()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::size_t gridfire::utils::fast_mix </td>
+          <td>(</td>
+          <td class="paramtype">std::size_t</td>          <td class="paramname"><span class="paramname"><em>h</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel noexcept">noexcept</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -298,24 +319,17 @@ Variables</h2></td></tr>
         <tr>
           <td class="memname">std::string gridfire::utils::format_table </td>
           <td>(</td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>tableName</em>, </td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>tableName</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1ColumnBase.html">ColumnBase</a> &gt; &gt; &amp;&#160;</td>
-          <td class="paramname"><em>columns</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1_column_base.html">ColumnBase</a> &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>columns</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -334,22 +348,21 @@ Variables</h2></td></tr>
         <tr>
           <td class="memname">std::string gridfire::utils::format_table </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1utils_1_1TableBase.html">TableBase</a> &amp;&#160;</td>
-          <td class="paramname"><em>table</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1utils_1_1_table_base.html">TableBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>table</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="a3d0646bcc1a6fd8df22ac0c758bfd5c4" name="a3d0646bcc1a6fd8df22ac0c758bfd5c4"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a3d0646bcc1a6fd8df22ac0c758bfd5c4">&#9670;&#160;</a></span>formatNuclearTimescaleLogString()</h2>
+<a id="ab1cdad5a93d4674e902861917ae7fd6b" name="ab1cdad5a93d4674e902861917ae7fd6b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab1cdad5a93d4674e902861917ae7fd6b">&#9670;&#160;</a></span>formatNuclearTimescaleLogString()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -357,31 +370,27 @@ Variables</h2></td></tr>
         <tr>
           <td class="memname">std::string gridfire::utils::formatNuclearTimescaleLogString </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">engine::DynamicEngine</a> &amp;&#160;</td>
-          <td class="paramname"><em>engine</em>, </td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const fourdst::composition::Composition &amp;&#160;</td>
-          <td class="paramname"><em>composition</em>, </td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>T9</em>, </td>
+          <td class="paramtype">const fourdst::composition::Composition &amp;</td>          <td class="paramname"><span class="paramname"><em>composition</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">double&#160;</td>
-          <td class="paramname"><em>rho</em>&#160;</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -390,6 +399,7 @@ Variables</h2></td></tr>
 <p>This function takes a reaction network engine and the current plasma conditions to calculate the characteristic timescales for each species. It then formats this information into a neatly aligned ASCII table, which is suitable for logging or printing to the console.</p>
 <dl class="params"><dt>Parameters</dt><dd>
   <table class="params">
+    <tr><td class="paramname">ctx</td><td></td></tr>
     <tr><td class="paramname">engine</td><td>A constant reference to a <code>DynamicEngine</code> object, used to calculate the species timescales. </td></tr>
     <tr><td class="paramname">composition</td><td>The current composition of the plasma </td></tr>
     <tr><td class="paramname">T9</td><td>The temperature in units of 10^9 K. </td></tr>
@@ -413,7 +423,7 @@ Variables</h2></td></tr>
 <li>The final string, including header and footer lines, is returned.</li>
 </ol>
 <p><b>Usage</b> </p><div class="fragment"><div class="line"><span class="comment">// Assume &#39;my_engine&#39; is a valid DynamicEngine object and Y, T9, rho are initialized.</span></div>
-<div class="line">std::string log_output = <a class="code hl_function" href="namespacegridfire_1_1utils.html#a3d0646bcc1a6fd8df22ac0c758bfd5c4">gridfire::utils::formatNuclearTimescaleLogString</a>(my_engine, Y, T9, rho);</div>
+<div class="line">std::string log_output = <a class="code hl_function" href="#ab1cdad5a93d4674e902861917ae7fd6b">gridfire::utils::formatNuclearTimescaleLogString</a>(my_engine, Y, T9, rho);</div>
 <div class="line">std::cout &lt;&lt; log_output;</div>
 <div class="line"> </div>
 <div class="line"><span class="comment">// Example Output:</span></div>
@@ -424,7 +434,7 @@ Variables</h2></td></tr>
 <div class="line"><span class="comment">// he4          inf</span></div>
 <div class="line"><span class="comment">// c12          8.765e-02</span></div>
 <div class="line"><span class="comment">// ==========================</span></div>
-<div class="ttc" id="anamespacegridfire_1_1utils_html_a3d0646bcc1a6fd8df22ac0c758bfd5c4"><div class="ttname"><a href="namespacegridfire_1_1utils.html#a3d0646bcc1a6fd8df22ac0c758bfd5c4">gridfire::utils::formatNuclearTimescaleLogString</a></div><div class="ttdeci">std::string formatNuclearTimescaleLogString(const engine::DynamicEngine &amp;engine, const fourdst::composition::Composition &amp;composition, double T9, double rho)</div><div class="ttdoc">Formats a map of nuclear species timescales into a human-readable string.</div><div class="ttdef"><b>Definition</b> logging.cpp:11</div></div>
+<div class="ttc" id="anamespacegridfire_1_1utils_html_ab1cdad5a93d4674e902861917ae7fd6b"><div class="ttname"><a href="#ab1cdad5a93d4674e902861917ae7fd6b">gridfire::utils::formatNuclearTimescaleLogString</a></div><div class="ttdeci">std::string formatNuclearTimescaleLogString(engine::scratch::StateBlob &amp;ctx, const engine::DynamicEngine &amp;engine, const fourdst::composition::Composition &amp;composition, double T9, double rho)</div><div class="ttdoc">Formats a map of nuclear species timescales into a human-readable string.</div><div class="ttdef"><b>Definition</b> logging.cpp:12</div></div>
 </div><!-- fragment --> 
 </div>
 </div>
@@ -440,24 +450,17 @@ Variables</h2></td></tr>
         <tr>
           <td class="memname">uint_fast32_t gridfire::utils::hash_atomic </td>
           <td>(</td>
-          <td class="paramtype">const uint16_t&#160;</td>
-          <td class="paramname"><em>a</em>, </td>
+          <td class="paramtype">const uint16_t</td>          <td class="paramname"><span class="paramname"><em>a</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const uint8_t&#160;</td>
-          <td class="paramname"><em>z</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const uint8_t</td>          <td class="paramname"><span class="paramname"><em>z</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span><span class="mlabel">noexcept</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel noexcept">noexcept</span></span>  </td>
   </tr>
 </table>
 </div><div class="memdoc">
@@ -480,24 +483,17 @@ Variables</h2></td></tr>
 <div class="memitem">
 <div class="memproto">
 <div class="memtemplate">
-template&lt;typename T &gt; </div>
+template&lt;typename T&gt; </div>
       <table class="memname">
         <tr>
           <td class="memname">std::size_t gridfire::utils::hash_combine </td>
           <td>(</td>
-          <td class="paramtype">std::size_t&#160;</td>
-          <td class="paramname"><em>seed</em>, </td>
+          <td class="paramtype">std::size_t</td>          <td class="paramname"><span class="paramname"><em>seed</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const T &amp;&#160;</td>
-          <td class="paramname"><em>v</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const T &amp;</td>          <td class="paramname"><span class="paramname"><em>v</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -516,14 +512,52 @@ template&lt;typename T &gt; </div>
         <tr>
           <td class="memname">std::uint64_t gridfire::utils::hash_reaction </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1Reaction.html">reaction::Reaction</a> &amp;&#160;</td>
-          <td class="paramname"><em>reaction</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">reaction::Reaction</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span><span class="mlabel">noexcept</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel noexcept">noexcept</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aafc480c1ff1fd3d3a451d9abeed5d511" name="aafc480c1ff1fd3d3a451d9abeed5d511"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aafc480c1ff1fd3d3a451d9abeed5d511">&#9670;&#160;</a></span>hash_state()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::size_t gridfire::utils::hash_state </td>
+          <td>(</td>
+          <td class="paramtype">const fourdst::composition::CompositionAbstract &amp;</td>          <td class="paramname"><span class="paramname"><em>comp</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const double</td>          <td class="paramname"><span class="paramname"><em>T9</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>reactions</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel noexcept">noexcept</span></span>  </td>
   </tr>
 </table>
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@@ -542,24 +576,17 @@ template&lt;typename T &gt; </div>
         <tr>
           <td class="memname">N_Vector gridfire::utils::init_sun_vector </td>
           <td>(</td>
-          <td class="paramtype">uint64_t&#160;</td>
-          <td class="paramname"><em>size</em>, </td>
+          <td class="paramtype">uint64_t</td>          <td class="paramname"><span class="paramname"><em>size</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">SUNContext&#160;</td>
-          <td class="paramname"><em>sun_ctx</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">SUNContext</td>          <td class="paramname"><span class="paramname"><em>sun_ctx</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
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@@ -572,7 +599,7 @@ template&lt;typename T &gt; </div>
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-template&lt;std::ranges::input_range Container, typename Elem  = std::ranges::range_reference_t&lt;Container&gt;, typename Transform  = std::identity, typename Pred  = bool(*)(const std::ranges::range_value_t&lt;Container&gt;&amp;)&gt; <br />
+template&lt;std::ranges::input_range Container, typename Elem = std::ranges::range_reference_t&lt;Container&gt;, typename Transform = std::identity, typename Pred = bool(*)(const std::ranges::range_value_t&lt;Container&gt;&amp;)&gt; <br />
 requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::invoke_result_t&lt;Transform, Elem&gt;&gt; &amp;&amp; std::predicate&lt;Pred, Elem&gt;</div>
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           <td class="memname">static std::string gridfire::utils::iterable_to_delimited_string </td>
           <td>(</td>
-          <td class="paramtype">const Container &amp;&#160;</td>
-          <td class="paramname"><em>container</em>, </td>
+          <td class="paramtype">const Container &amp;</td>          <td class="paramname"><span class="paramname"><em>container</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::string_view&#160;</td>
-          <td class="paramname"><em>delimiter</em> = <code>&quot;,&#160;&quot;</code>, </td>
+          <td class="paramtype">const std::string_view</td>          <td class="paramname"><span class="paramname"><em>delimiter</em></span><span class="paramdefsep"> = </span><span class="paramdefval">&quot;,&#160;&quot;</span>, </td>
         </tr>
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           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">Transform&#160;</td>
-          <td class="paramname"><em>transform</em> = <code>{}</code>, </td>
+          <td class="paramtype">Transform</td>          <td class="paramname"><span class="paramname"><em>transform</em></span><span class="paramdefsep"> = </span><span class="paramdefval">{}</span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">Pred&#160;</td>
-          <td class="paramname"><em>pred</em> = <code>[](const&#160;auto&amp;){&#160;return&#160;true;&#160;}</code>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">Pred</td>          <td class="paramname"><span class="paramname"><em>pred</em></span><span class="paramdefsep"> = </span><span class="paramdefval">[](const&#160;auto&amp;){&#160;return&#160;true;&#160;}</span>&#160;)</td>
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       </table>
   </td>
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-<span class="mlabels"><span class="mlabel">static</span><span class="mlabel">noexcept</span></span>  </td>
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel noexcept">noexcept</span></span>  </td>
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@@ -629,24 +647,17 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
         <tr>
           <td class="memname">void gridfire::utils::print_table </td>
           <td>(</td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>tableName</em>, </td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>tableName</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1ColumnBase.html">ColumnBase</a> &gt; &gt; &amp;&#160;</td>
-          <td class="paramname"><em>columns</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1_column_base.html">ColumnBase</a> &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>columns</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
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@@ -665,14 +676,13 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
         <tr>
           <td class="memname">void gridfire::utils::print_table </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="classgridfire_1_1utils_1_1TableBase.html">TableBase</a> &amp;&#160;</td>
-          <td class="paramname"><em>table</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1utils_1_1_table_base.html">TableBase</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>table</em></span></td><td>)</td>
           <td></td>
         </tr>
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-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
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@@ -691,14 +701,13 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
         <tr>
           <td class="memname">const std::unordered_map&lt; int, std::string &gt; &amp; gridfire::utils::sundials_retcode_map </td>
           <td>(</td>
-          <td class="paramtype">const <a class="el" href="namespacegridfire_1_1utils.html#a7cea622c9311bfd0f0b9d7b6298ea04e">SUNDIALS_RET_CODE_TYPES</a>&#160;</td>
-          <td class="paramname"><em>type</em></td><td>)</td>
+          <td class="paramtype">const <a class="el" href="#a7cea622c9311bfd0f0b9d7b6298ea04e">SUNDIALS_RET_CODE_TYPES</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
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@@ -717,24 +726,17 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
         <tr>
           <td class="memname">void gridfire::utils::to_csv </td>
           <td>(</td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>filename</em>, </td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1ColumnBase.html">ColumnBase</a> &gt; &gt; &amp;&#160;</td>
-          <td class="paramname"><em>columns</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1_column_base.html">ColumnBase</a> &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>columns</em></span>&#160;)</td>
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       </table>
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@@ -753,14 +755,13 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
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           <td class="memname">nlohmann::json gridfire::utils::to_json </td>
           <td>(</td>
-          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1ColumnBase.html">ColumnBase</a> &gt; &gt; &amp;&#160;</td>
-          <td class="paramname"><em>columns</em></td><td>)</td>
+          <td class="paramtype">const std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1_column_base.html">ColumnBase</a> &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>columns</em></span></td><td>)</td>
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         </tr>
       </table>
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@@ -779,30 +780,22 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
         <tr>
           <td class="memname">void gridfire::utils::to_json_file </td>
           <td>(</td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>filename</em>, </td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>filename</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::vector&lt; std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1ColumnBase.html">ColumnBase</a> &gt; &gt; &gt; &amp;&#160;</td>
-          <td class="paramname"><em>tables</em>, </td>
+          <td class="paramtype">const std::vector&lt; std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1utils_1_1_column_base.html">ColumnBase</a> &gt; &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>tables</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">const std::vector&lt; std::string &gt; &amp;&#160;</td>
-          <td class="paramname"><em>tableNames</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">const std::vector&lt; std::string &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>tableNames</em></span>&#160;)</td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
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@@ -821,14 +814,13 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
         <tr>
           <td class="memname">size_t gridfire::utils::visual_width </td>
           <td>(</td>
-          <td class="paramtype">const std::string &amp;&#160;</td>
-          <td class="paramname"><em>s</em></td><td>)</td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>s</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
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@@ -851,7 +843,7 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span><span class="mlabel">static</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel static">static</span></span>  </td>
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@@ -873,7 +865,7 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
       </table>
   </td>
   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel">inline</span><span class="mlabel">static</span></span>  </td>
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel static">static</span></span>  </td>
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@@ -911,7 +903,7 @@ requires std::invocable&lt;Transform, Elem&gt; &amp;&amp; Streamable&lt;std::inv
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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index 691dfa69..cffc325a 100644
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 var namespacegridfire_1_1utils =
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-    [ "Column", "classgridfire_1_1utils_1_1Column.html", "classgridfire_1_1utils_1_1Column" ],
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-    [ "Streamable", "conceptgridfire_1_1utils_1_1Streamable.html", null ],
+    [ "Column", "classgridfire_1_1utils_1_1_column.html", "classgridfire_1_1utils_1_1_column" ],
+    [ "ColumnBase", "classgridfire_1_1utils_1_1_column_base.html", "classgridfire_1_1utils_1_1_column_base" ],
+    [ "Table", "classgridfire_1_1utils_1_1_table.html", "classgridfire_1_1utils_1_1_table" ],
+    [ "TableBase", "classgridfire_1_1utils_1_1_table_base.html", "classgridfire_1_1utils_1_1_table_base" ],
+    [ "Streamable", "conceptgridfire_1_1utils_1_1_streamable.html", null ],
     [ "SUNDIALS_RET_CODE_TYPES", "namespacegridfire_1_1utils.html#a7cea622c9311bfd0f0b9d7b6298ea04e", [
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     [ "check_cvode_flag", "namespacegridfire_1_1utils.html#ab9d0cfc158090ca9ed09646d407b04f2", null ],
     [ "check_sundials_flag", "namespacegridfire_1_1utils.html#a71be80c2e36e5436cddcad795d61a0d7", null ],
+    [ "fast_mix", "namespacegridfire_1_1utils.html#a41c5614fd788bee1061f628ad0085a21", null ],
     [ "format_table", "namespacegridfire_1_1utils.html#a6451ba6762273b91a8281043cfaa5d2a", null ],
     [ "format_table", "namespacegridfire_1_1utils.html#a2eed085058abdb9d7fbbdb9647b98323", null ],
-    [ "formatNuclearTimescaleLogString", "namespacegridfire_1_1utils.html#a3d0646bcc1a6fd8df22ac0c758bfd5c4", null ],
+    [ "formatNuclearTimescaleLogString", "namespacegridfire_1_1utils.html#ab1cdad5a93d4674e902861917ae7fd6b", null ],
     [ "hash_atomic", "namespacegridfire_1_1utils.html#a0dc0b71ddae108a47887458c2f3f780e", null ],
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     [ "hash_reaction", "namespacegridfire_1_1utils.html#a011ac3184b4fcf21322868b1aaa4d2d1", null ],
+    [ "hash_state", "namespacegridfire_1_1utils.html#aafc480c1ff1fd3d3a451d9abeed5d511", null ],
     [ "init_sun_vector", "namespacegridfire_1_1utils.html#adfbe36ddda15b6e206d9726236d543ab", null ],
     [ "iterable_to_delimited_string", "namespacegridfire_1_1utils.html#a334828d5d2b5e67560638ea9b3c031a1", null ],
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index 741bcf81..dd333b59 100644
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+<script type="text/javascript" src="clipboard.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 /* @license-end */
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
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+$(function(){initNavTree('namespacegridfire__mod.html',''); initResizable(true); });
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-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147ade71d6ffeb5785f4a94dfb4957972c6b">fdsse_invalid_composition_error</a> = 102
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a6af8e4f88ac4de0a6713500ed47924a3">fdsse_composition_error</a> = 103
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a6fb105c630638f3cf26c1d9b869c6b9b">gf_non_gridfire_error</a> = -2
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147a9d6657b793d36330f0c9301452de425e">fdsse_species_error</a> = 101
+, <a class="el" href="#a244769a94919381fd624416c41519147ade71d6ffeb5785f4a94dfb4957972c6b">fdsse_invalid_composition_error</a> = 102
+, <a class="el" href="#a244769a94919381fd624416c41519147a6af8e4f88ac4de0a6713500ed47924a3">fdsse_composition_error</a> = 103
+, <a class="el" href="#a244769a94919381fd624416c41519147a6fb105c630638f3cf26c1d9b869c6b9b">gf_non_gridfire_error</a> = -2
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147ab4343c4611fdcdfbff141a6967f99731">gf_unknown_error</a> = -1
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147afcd18f5d78d9f7b0b6418eec99888bdc">gf_success</a> = 0
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147adb3204164d360916830dcf46d7c7639f">gf_invalid_qse_solution_error</a> = 5
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147acf5bc28581819a8b7fe22be97176a7db">gf_failed_to_partition_error</a> = 6
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147ab4343c4611fdcdfbff141a6967f99731">gf_unknown_error</a> = -1
+, <a class="el" href="#a244769a94919381fd624416c41519147afcd18f5d78d9f7b0b6418eec99888bdc">gf_success</a> = 0
+, <a class="el" href="#a244769a94919381fd624416c41519147adb3204164d360916830dcf46d7c7639f">gf_invalid_qse_solution_error</a> = 5
+, <a class="el" href="#a244769a94919381fd624416c41519147acf5bc28581819a8b7fe22be97176a7db">gf_failed_to_partition_error</a> = 6
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a31df7fd44862d2e4470c395224c788f8">gf_network_resized_error</a> = 7
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147ab2c0ad54897923d2ea73b561c238dd4b">gf_unable_to_set_network_reactions_error</a> = 8
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a0c0949689c7b4d78cbfe62ac6643d496">gf_bad_collection_error</a> = 9
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147abe6ea56c41227a3b163bd65c14483604">gf_bad_rhs_enigne_error</a> = 10
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147a31df7fd44862d2e4470c395224c788f8">gf_network_resized_error</a> = 7
+, <a class="el" href="#a244769a94919381fd624416c41519147ab2c0ad54897923d2ea73b561c238dd4b">gf_unable_to_set_network_reactions_error</a> = 8
+, <a class="el" href="#a244769a94919381fd624416c41519147a0c0949689c7b4d78cbfe62ac6643d496">gf_bad_collection_error</a> = 9
+, <a class="el" href="#a244769a94919381fd624416c41519147abe6ea56c41227a3b163bd65c14483604">gf_bad_rhs_enigne_error</a> = 10
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147abd7d07be0ca380f6adc4b3598d0553ab">gf_stale_jacobian_error</a> = 11
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a0b824fddd8a1a84d70ee4354d003a2a1">gf_uninitialized_jacobian_error</a> = 12
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a11dcf7bd1e827e2084683d84dd7be472">gf_unknonwn_jacobian_error</a> = 13
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a7ea5db4261227ae7a38f37cc523263e4">gf_jacobian_error</a> = 14
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147abd7d07be0ca380f6adc4b3598d0553ab">gf_stale_jacobian_error</a> = 11
+, <a class="el" href="#a244769a94919381fd624416c41519147a0b824fddd8a1a84d70ee4354d003a2a1">gf_uninitialized_jacobian_error</a> = 12
+, <a class="el" href="#a244769a94919381fd624416c41519147a11dcf7bd1e827e2084683d84dd7be472">gf_unknonwn_jacobian_error</a> = 13
+, <a class="el" href="#a244769a94919381fd624416c41519147a7ea5db4261227ae7a38f37cc523263e4">gf_jacobian_error</a> = 14
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147af42c69c27486dc40c6981e1692157aa1">gf_engine_error</a> = 15
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a356f5d6f229750bfade0fb3e7428bafe">gf_missing_base_reaction_error</a> = 16
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a234d2433915d095cb023087d7505d8b7">gf_missing_seed_species_error</a> = 17
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147af6b177def1d11c5f53a258d9f64a441e">gf_missing_key_reaction_error</a> = 18
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147af42c69c27486dc40c6981e1692157aa1">gf_engine_error</a> = 15
+, <a class="el" href="#a244769a94919381fd624416c41519147a356f5d6f229750bfade0fb3e7428bafe">gf_missing_base_reaction_error</a> = 16
+, <a class="el" href="#a244769a94919381fd624416c41519147a234d2433915d095cb023087d7505d8b7">gf_missing_seed_species_error</a> = 17
+, <a class="el" href="#a244769a94919381fd624416c41519147af6b177def1d11c5f53a258d9f64a441e">gf_missing_key_reaction_error</a> = 18
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a815bd46a92d34d6477f1fee5438feaaa">gf_policy_error</a> = 19
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a01eddf0f5d3c19271ad9b23b066c1e7a">gf_reaction_parsing_error</a> = 20
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147ab6dd69f49d4a5293a27ce54886d51162">gf_reactoion_error</a> = 21
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a039f9342bd11e28e0afab4e572ce1cb8">gf_singular_jacobian_error</a> = 22
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147a815bd46a92d34d6477f1fee5438feaaa">gf_policy_error</a> = 19
+, <a class="el" href="#a244769a94919381fd624416c41519147a01eddf0f5d3c19271ad9b23b066c1e7a">gf_reaction_parsing_error</a> = 20
+, <a class="el" href="#a244769a94919381fd624416c41519147ab6dd69f49d4a5293a27ce54886d51162">gf_reactoion_error</a> = 21
+, <a class="el" href="#a244769a94919381fd624416c41519147a039f9342bd11e28e0afab4e572ce1cb8">gf_singular_jacobian_error</a> = 22
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a20b3e042050a94181300e1c25a562390">gf_ill_conditioned_jacobian_error</a> = 23
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a9ec6f5abf7d3bd58d9f67ee2de11f611">gf_cvode_solver_failure_error</a> = 24
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147af0951e8fed46bd965b51e05e210b0972">gf_kinsol_solver_failure_error</a> = 25
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a725f00c38fc963c156fa376da295616a">gf_sundials_error</a> = 26
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147a20b3e042050a94181300e1c25a562390">gf_ill_conditioned_jacobian_error</a> = 23
+, <a class="el" href="#a244769a94919381fd624416c41519147a9ec6f5abf7d3bd58d9f67ee2de11f611">gf_cvode_solver_failure_error</a> = 24
+, <a class="el" href="#a244769a94919381fd624416c41519147af0951e8fed46bd965b51e05e210b0972">gf_kinsol_solver_failure_error</a> = 25
+, <a class="el" href="#a244769a94919381fd624416c41519147a725f00c38fc963c156fa376da295616a">gf_sundials_error</a> = 26
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a0faadea5fc310fab10b0b39aaa14be56">gf_solver_error</a> = 27
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a5478182be8d9b2102536cab3557e8b19">gf_hashing_error</a> = 28
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a5594f6ed43fe0a6153437e9ee8cd936f">gf_utility_error</a> = 29
-, <a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a6c28e3b538fc7c36730f1dd68c742163">gf_debug_errror</a> = 30
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147a0faadea5fc310fab10b0b39aaa14be56">gf_solver_error</a> = 27
+, <a class="el" href="#a244769a94919381fd624416c41519147a5478182be8d9b2102536cab3557e8b19">gf_hashing_error</a> = 28
+, <a class="el" href="#a244769a94919381fd624416c41519147a5594f6ed43fe0a6153437e9ee8cd936f">gf_utility_error</a> = 29
+, <a class="el" href="#a244769a94919381fd624416c41519147a6c28e3b538fc7c36730f1dd68c742163">gf_debug_errror</a> = 30
 , <br />
-&#160;&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147ad37197a22840f8c0fe846a5c7f1d8b4e">gf_gridfire_error</a> = 31
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147ad37197a22840f8c0fe846a5c7f1d8b4e">gf_gridfire_error</a> = 31
+, <a class="el" href="#a244769a94919381fd624416c41519147a1ec3220685095a431d34045bc6cc1b22">gf_uninitialized_input_memory_error</a> = 32
+, <a class="el" href="#a244769a94919381fd624416c41519147aabf5cfdd209196f0076d8e61d17f1a42">gf_uninitialized_output_memory_error</a> = 33
+, <a class="el" href="#a244769a94919381fd624416c41519147ad066cda29029cf7cafb2d6698aaf335e">gf_invald_num_species</a> = 34
+, <br />
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147aa15140bb392838790a9de6f3ffd0de79">gf_invalid_timesteps</a> = 35
+, <a class="el" href="#a244769a94919381fd624416c41519147a33cceb543129fe9b37ddd809147a7163">gf_unknonwn_free_type</a> = 36
+, <a class="el" href="#a244769a94919381fd624416c41519147a8cd904db660f5f0b5772ba6642e9d509">gf_invalid_type</a> = 37
+, <a class="el" href="#a244769a94919381fd624416c41519147a7404c48f0eb555ce6f07190b9d3e104a">gf_single_zone</a> = 1001
+, <br />
+&#160;&#160;<a class="el" href="#a244769a94919381fd624416c41519147aea92a4518d63ce2b52e0a4ab413c1843">gf_multi_zone</a> = 1002
 <br />
  }</td></tr>
 <tr class="separator:a244769a94919381fd624416c41519147"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions/Subroutines</h2></td></tr>
-<tr class="memitem:aa7a417138a7967e7eacd2d79339850eb" id="r_aa7a417138a7967e7eacd2d79339850eb"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire__mod.html#aa7a417138a7967e7eacd2d79339850eb">gff_init</a> (self)</td></tr>
-<tr class="separator:aa7a417138a7967e7eacd2d79339850eb"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a64b4012b59c5ddf025073c6a8bf467c3" id="r_a64b4012b59c5ddf025073c6a8bf467c3"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire__mod.html#a64b4012b59c5ddf025073c6a8bf467c3">gff_free</a> (self)</td></tr>
+<tr class="memitem:aae3ab1a003b40da734bf0464cc5fb319" id="r_aae3ab1a003b40da734bf0464cc5fb319"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aae3ab1a003b40da734bf0464cc5fb319">gff_init</a> (self, type, zones)</td></tr>
+<tr class="separator:aae3ab1a003b40da734bf0464cc5fb319"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a64b4012b59c5ddf025073c6a8bf467c3" id="r_a64b4012b59c5ddf025073c6a8bf467c3"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a64b4012b59c5ddf025073c6a8bf467c3">gff_free</a> (self)</td></tr>
 <tr class="separator:a64b4012b59c5ddf025073c6a8bf467c3"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:afdb6d3ff7765f7bec167afab2797ebac" id="r_afdb6d3ff7765f7bec167afab2797ebac"><td class="memItemLeft" align="right" valign="top">character(len=:) function, allocatable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire__mod.html#afdb6d3ff7765f7bec167afab2797ebac">get_last_error</a> (self)</td></tr>
-<tr class="separator:afdb6d3ff7765f7bec167afab2797ebac"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ac1514859bc529604aebece037f93cd3f" id="r_ac1514859bc529604aebece037f93cd3f"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire__mod.html#ac1514859bc529604aebece037f93cd3f">register_species</a> (self, species_list)</td></tr>
-<tr class="separator:ac1514859bc529604aebece037f93cd3f"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a76639df018b589884f5ea173a8ba6561" id="r_a76639df018b589884f5ea173a8ba6561"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire__mod.html#a76639df018b589884f5ea173a8ba6561">setup_policy</a> (self, policy_name, abundances)</td></tr>
-<tr class="separator:a76639df018b589884f5ea173a8ba6561"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a6ef21ebd4c28993a28ef2745cbeae022" id="r_a6ef21ebd4c28993a28ef2745cbeae022"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire__mod.html#a6ef21ebd4c28993a28ef2745cbeae022">setup_solver</a> (self, solver_name)</td></tr>
-<tr class="separator:a6ef21ebd4c28993a28ef2745cbeae022"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:aa4e2323274c9a492027a34979ffed973" id="r_aa4e2323274c9a492027a34979ffed973"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire__mod.html#aa4e2323274c9a492027a34979ffed973">evolve</a> (self, y_in, t, rho, dt, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
-<tr class="separator:aa4e2323274c9a492027a34979ffed973"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6ec54357173537549bbd7fb77fdc6dcf" id="r_a6ec54357173537549bbd7fb77fdc6dcf"><td class="memItemLeft" align="right" valign="top">character(len=:) function, allocatable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6ec54357173537549bbd7fb77fdc6dcf">gff_get_last_error</a> (self)</td></tr>
+<tr class="separator:a6ec54357173537549bbd7fb77fdc6dcf"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6789b386afad10758a817d943be754e0" id="r_a6789b386afad10758a817d943be754e0"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6789b386afad10758a817d943be754e0">gff_register_species</a> (self, species_list)</td></tr>
+<tr class="separator:a6789b386afad10758a817d943be754e0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab41de5ffc335f2dc31de185ca8c9f183" id="r_ab41de5ffc335f2dc31de185ca8c9f183"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab41de5ffc335f2dc31de185ca8c9f183">gff_setup_policy</a> (self, policy_name, abundances)</td></tr>
+<tr class="separator:ab41de5ffc335f2dc31de185ca8c9f183"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:abb95b0aa3e2446b2ea94c7f0e67887a3" id="r_abb95b0aa3e2446b2ea94c7f0e67887a3"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#abb95b0aa3e2446b2ea94c7f0e67887a3">gff_setup_solver</a> (self, solver_name)</td></tr>
+<tr class="separator:abb95b0aa3e2446b2ea94c7f0e67887a3"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0efe918be492a18d8ed355bd5dc5d8de" id="r_a0efe918be492a18d8ed355bd5dc5d8de"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0efe918be492a18d8ed355bd5dc5d8de">gff_evolve_single</a> (self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
+<tr class="separator:a0efe918be492a18d8ed355bd5dc5d8de"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ae9e4ae78a806c6e9d83c7c52bcd36de8" id="r_ae9e4ae78a806c6e9d83c7c52bcd36de8"><td class="memItemLeft" align="right" valign="top">subroutine&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae9e4ae78a806c6e9d83c7c52bcd36de8">gff_evolve_multi</a> (self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
+<tr class="separator:ae9e4ae78a806c6e9d83c7c52bcd36de8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
+Variables</h2></td></tr>
+<tr class="memitem:ace5f00c48b7d638def9833111aa65c38" id="r_ace5f00c48b7d638def9833111aa65c38"><td class="memItemLeft" align="right" valign="top">type(<a class="el" href="structgridfire__mod_1_1gf__type.html">gf_type</a>), parameter, public&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ace5f00c48b7d638def9833111aa65c38">single_zone</a> = <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a>(1001)</td></tr>
+<tr class="separator:ace5f00c48b7d638def9833111aa65c38"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a9f5a047acbb12c43ca8c6ce46daf42f3" id="r_a9f5a047acbb12c43ca8c6ce46daf42f3"><td class="memItemLeft" align="right" valign="top">type(<a class="el" href="structgridfire__mod_1_1gf__type.html">gf_type</a>), parameter, public&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a9f5a047acbb12c43ca8c6ce46daf42f3">multi_zone</a> = <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a>(1002)</td></tr>
+<tr class="separator:a9f5a047acbb12c43ca8c6ce46daf42f3"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Enumeration Type Documentation</h2>
 <a id="a244769a94919381fd624416c41519147" name="a244769a94919381fd624416c41519147"></a>
@@ -239,117 +272,175 @@ Functions/Subroutines</h2></td></tr>
 <tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147a5594f6ed43fe0a6153437e9ee8cd936f" name="a244769a94919381fd624416c41519147a5594f6ed43fe0a6153437e9ee8cd936f"></a>gf_utility_error&#160;</td><td class="fielddoc"></td></tr>
 <tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147a6c28e3b538fc7c36730f1dd68c742163" name="a244769a94919381fd624416c41519147a6c28e3b538fc7c36730f1dd68c742163"></a>gf_debug_errror&#160;</td><td class="fielddoc"></td></tr>
 <tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147ad37197a22840f8c0fe846a5c7f1d8b4e" name="a244769a94919381fd624416c41519147ad37197a22840f8c0fe846a5c7f1d8b4e"></a>gf_gridfire_error&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147a1ec3220685095a431d34045bc6cc1b22" name="a244769a94919381fd624416c41519147a1ec3220685095a431d34045bc6cc1b22"></a>gf_uninitialized_input_memory_error&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147aabf5cfdd209196f0076d8e61d17f1a42" name="a244769a94919381fd624416c41519147aabf5cfdd209196f0076d8e61d17f1a42"></a>gf_uninitialized_output_memory_error&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147ad066cda29029cf7cafb2d6698aaf335e" name="a244769a94919381fd624416c41519147ad066cda29029cf7cafb2d6698aaf335e"></a>gf_invald_num_species&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147aa15140bb392838790a9de6f3ffd0de79" name="a244769a94919381fd624416c41519147aa15140bb392838790a9de6f3ffd0de79"></a>gf_invalid_timesteps&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147a33cceb543129fe9b37ddd809147a7163" name="a244769a94919381fd624416c41519147a33cceb543129fe9b37ddd809147a7163"></a>gf_unknonwn_free_type&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147a8cd904db660f5f0b5772ba6642e9d509" name="a244769a94919381fd624416c41519147a8cd904db660f5f0b5772ba6642e9d509"></a>gf_invalid_type&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147a7404c48f0eb555ce6f07190b9d3e104a" name="a244769a94919381fd624416c41519147a7404c48f0eb555ce6f07190b9d3e104a"></a>gf_single_zone&#160;</td><td class="fielddoc"></td></tr>
+<tr><td class="fieldname"><a id="a244769a94919381fd624416c41519147aea92a4518d63ce2b52e0a4ab413c1843" name="a244769a94919381fd624416c41519147aea92a4518d63ce2b52e0a4ab413c1843"></a>gf_multi_zone&#160;</td><td class="fielddoc"></td></tr>
 </table>
 
 </div>
 </div>
 <h2 class="groupheader">Function/Subroutine Documentation</h2>
-<a id="aa4e2323274c9a492027a34979ffed973" name="aa4e2323274c9a492027a34979ffed973"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa4e2323274c9a492027a34979ffed973">&#9670;&#160;</a></span>evolve()</h2>
+<a id="ae9e4ae78a806c6e9d83c7c52bcd36de8" name="ae9e4ae78a806c6e9d83c7c52bcd36de8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae9e4ae78a806c6e9d83c7c52bcd36de8">&#9670;&#160;</a></span>gff_evolve_multi()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">subroutine gridfire_mod::evolve </td>
+          <td class="memname">subroutine gridfire_mod::gff_evolve_multi </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), dimension(:), intent(in)&#160;</td>
-          <td class="paramname"><em>y_in</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:,:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), value&#160;</td>
-          <td class="paramname"><em>t</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), value&#160;</td>
-          <td class="paramname"><em>rho</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), value&#160;</td>
-          <td class="paramname"><em>dt</em>, </td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), dimension(:), intent(out)&#160;</td>
-          <td class="paramname"><em>y_out</em>, </td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>energy</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:,:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>dedt</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>dedrho</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>nu_e_loss</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>nu_flux</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_e_loss</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>mass_lost</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">integer, intent(out)&#160;</td>
-          <td class="paramname"><em>ierr</em>&#160;</td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">integer, intent(out)</td>          <td class="paramname"><span class="paramname"><em>ierr</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="afdb6d3ff7765f7bec167afab2797ebac" name="afdb6d3ff7765f7bec167afab2797ebac"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#afdb6d3ff7765f7bec167afab2797ebac">&#9670;&#160;</a></span>get_last_error()</h2>
+<a id="a0efe918be492a18d8ed355bd5dc5d8de" name="a0efe918be492a18d8ed355bd5dc5d8de"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0efe918be492a18d8ed355bd5dc5d8de">&#9670;&#160;</a></span>gff_evolve_single()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">character(len=:) function, allocatable gridfire_mod::get_last_error </td>
+          <td class="memname">subroutine gridfire_mod::gff_evolve_single </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em></td><td>)</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_e_loss</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer, intent(out)</td>          <td class="paramname"><span class="paramname"><em>ierr</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -365,8 +456,7 @@ Functions/Subroutines</h2></td></tr>
         <tr>
           <td class="memname">subroutine gridfire_mod::gff_free </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)&#160;</td>
-          <td class="paramname"><em>self</em></td><td>)</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)</td>          <td class="paramname"><span class="paramname"><em>self</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -374,8 +464,25 @@ Functions/Subroutines</h2></td></tr>
 
 </div>
 </div>
-<a id="aa7a417138a7967e7eacd2d79339850eb" name="aa7a417138a7967e7eacd2d79339850eb"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa7a417138a7967e7eacd2d79339850eb">&#9670;&#160;</a></span>gff_init()</h2>
+<a id="a6ec54357173537549bbd7fb77fdc6dcf" name="a6ec54357173537549bbd7fb77fdc6dcf"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6ec54357173537549bbd7fb77fdc6dcf">&#9670;&#160;</a></span>gff_get_last_error()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">character(len=:) function, allocatable gridfire_mod::gff_get_last_error </td>
+          <td>(</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aae3ab1a003b40da734bf0464cc5fb319" name="aae3ab1a003b40da734bf0464cc5fb319"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aae3ab1a003b40da734bf0464cc5fb319">&#9670;&#160;</a></span>gff_init()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -383,99 +490,114 @@ Functions/Subroutines</h2></td></tr>
         <tr>
           <td class="memname">subroutine gridfire_mod::gff_init </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(out)&#160;</td>
-          <td class="paramname"><em>self</em></td><td>)</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(out)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">type(<a class="el" href="structgridfire__mod_1_1gf__type.html">gf_type</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>type</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer(c_size_t), intent(in), optional</td>          <td class="paramname"><span class="paramname"><em>zones</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="ac1514859bc529604aebece037f93cd3f" name="ac1514859bc529604aebece037f93cd3f"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#ac1514859bc529604aebece037f93cd3f">&#9670;&#160;</a></span>register_species()</h2>
+<a id="a6789b386afad10758a817d943be754e0" name="a6789b386afad10758a817d943be754e0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6789b386afad10758a817d943be754e0">&#9670;&#160;</a></span>gff_register_species()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">subroutine gridfire_mod::register_species </td>
+          <td class="memname">subroutine gridfire_mod::gff_register_species </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">character(len=*), dimension(:), intent(in)&#160;</td>
-          <td class="paramname"><em>species_list</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">character(len=*), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>species_list</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="a76639df018b589884f5ea173a8ba6561" name="a76639df018b589884f5ea173a8ba6561"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a76639df018b589884f5ea173a8ba6561">&#9670;&#160;</a></span>setup_policy()</h2>
+<a id="ab41de5ffc335f2dc31de185ca8c9f183" name="ab41de5ffc335f2dc31de185ca8c9f183"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab41de5ffc335f2dc31de185ca8c9f183">&#9670;&#160;</a></span>gff_setup_policy()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">subroutine gridfire_mod::setup_policy </td>
+          <td class="memname">subroutine gridfire_mod::gff_setup_policy </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">character(len=*), intent(in)&#160;</td>
-          <td class="paramname"><em>policy_name</em>, </td>
+          <td class="paramtype">character(len=*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>policy_name</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), dimension(:), intent(in)&#160;</td>
-          <td class="paramname"><em>abundances</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>abundances</em></span>&#160;)</td>
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-<h2 class="memtitle"><span class="permalink"><a href="#a6ef21ebd4c28993a28ef2745cbeae022">&#9670;&#160;</a></span>setup_solver()</h2>
+<a id="abb95b0aa3e2446b2ea94c7f0e67887a3" name="abb95b0aa3e2446b2ea94c7f0e67887a3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abb95b0aa3e2446b2ea94c7f0e67887a3">&#9670;&#160;</a></span>gff_setup_solver()</h2>
 
 <div class="memitem">
 <div class="memproto">
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         <tr>
-          <td class="memname">subroutine gridfire_mod::setup_solver </td>
+          <td class="memname">subroutine gridfire_mod::gff_setup_solver </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">character(len=*), intent(in)&#160;</td>
-          <td class="paramname"><em>solver_name</em>&#160;</td>
+          <td class="paramtype">character(len=*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>solver_name</em></span>&#160;)</td>
         </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Variable Documentation</h2>
+<a id="a9f5a047acbb12c43ca8c6ce46daf42f3" name="a9f5a047acbb12c43ca8c6ce46daf42f3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9f5a047acbb12c43ca8c6ce46daf42f3">&#9670;&#160;</a></span>multi_zone</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
         <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="memname">type(<a class="el" href="structgridfire__mod_1_1gf__type.html">gf_type</a>), parameter, public gridfire_mod::multi_zone = <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a>(1002)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ace5f00c48b7d638def9833111aa65c38" name="ace5f00c48b7d638def9833111aa65c38"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ace5f00c48b7d638def9833111aa65c38">&#9670;&#160;</a></span>single_zone</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">type(<a class="el" href="structgridfire__mod_1_1gf__type.html">gf_type</a>), parameter, public gridfire_mod::single_zone = <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42d">GF_TYPE</a>(1001)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -488,7 +610,7 @@ Functions/Subroutines</h2></td></tr>
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
     <li class="navelem"><a class="el" href="namespacegridfire__mod.html">gridfire_mod</a></li>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
 </div>
 </body>
diff --git a/docs/html/namespacegridfire__mod.js b/docs/html/namespacegridfire__mod.js
index b8b53979..5f20e8f2 100644
--- a/docs/html/namespacegridfire__mod.js
+++ b/docs/html/namespacegridfire__mod.js
@@ -2,17 +2,23 @@ var namespacegridfire__mod =
 [
     [ "gf_construct_engine_from_policy", "interfacegridfire__mod_1_1gf__construct__engine__from__policy.html", "interfacegridfire__mod_1_1gf__construct__engine__from__policy" ],
     [ "gf_construct_solver_from_engine", "interfacegridfire__mod_1_1gf__construct__solver__from__engine.html", "interfacegridfire__mod_1_1gf__construct__solver__from__engine" ],
-    [ "gf_evolve", "interfacegridfire__mod_1_1gf__evolve.html", "interfacegridfire__mod_1_1gf__evolve" ],
+    [ "gf_evolve_c_array", "interfacegridfire__mod_1_1gf__evolve__c__array.html", "interfacegridfire__mod_1_1gf__evolve__c__array" ],
+    [ "gf_evolve_c_scalar", "interfacegridfire__mod_1_1gf__evolve__c__scalar.html", "interfacegridfire__mod_1_1gf__evolve__c__scalar" ],
     [ "gf_free", "interfacegridfire__mod_1_1gf__free.html", "interfacegridfire__mod_1_1gf__free" ],
     [ "gf_get_last_error_message", "interfacegridfire__mod_1_1gf__get__last__error__message.html", "interfacegridfire__mod_1_1gf__get__last__error__message" ],
     [ "gf_init", "interfacegridfire__mod_1_1gf__init.html", "interfacegridfire__mod_1_1gf__init" ],
     [ "gf_register_species", "interfacegridfire__mod_1_1gf__register__species.html", "interfacegridfire__mod_1_1gf__register__species" ],
+    [ "gf_set_num_zones", "interfacegridfire__mod_1_1gf__set__num__zones.html", "interfacegridfire__mod_1_1gf__set__num__zones" ],
+    [ "gf_type", "structgridfire__mod_1_1gf__type.html", "structgridfire__mod_1_1gf__type" ],
     [ "gridfire", "structgridfire__mod_1_1gridfire.html", "structgridfire__mod_1_1gridfire" ],
-    [ "evolve", "namespacegridfire__mod.html#aa4e2323274c9a492027a34979ffed973", null ],
-    [ "get_last_error", "namespacegridfire__mod.html#afdb6d3ff7765f7bec167afab2797ebac", null ],
+    [ "gff_evolve_multi", "namespacegridfire__mod.html#ae9e4ae78a806c6e9d83c7c52bcd36de8", null ],
+    [ "gff_evolve_single", "namespacegridfire__mod.html#a0efe918be492a18d8ed355bd5dc5d8de", null ],
     [ "gff_free", "namespacegridfire__mod.html#a64b4012b59c5ddf025073c6a8bf467c3", null ],
-    [ "gff_init", "namespacegridfire__mod.html#aa7a417138a7967e7eacd2d79339850eb", null ],
-    [ "register_species", "namespacegridfire__mod.html#ac1514859bc529604aebece037f93cd3f", null ],
-    [ "setup_policy", "namespacegridfire__mod.html#a76639df018b589884f5ea173a8ba6561", null ],
-    [ "setup_solver", "namespacegridfire__mod.html#a6ef21ebd4c28993a28ef2745cbeae022", null ]
+    [ "gff_get_last_error", "namespacegridfire__mod.html#a6ec54357173537549bbd7fb77fdc6dcf", null ],
+    [ "gff_init", "namespacegridfire__mod.html#aae3ab1a003b40da734bf0464cc5fb319", null ],
+    [ "gff_register_species", "namespacegridfire__mod.html#a6789b386afad10758a817d943be754e0", null ],
+    [ "gff_setup_policy", "namespacegridfire__mod.html#ab41de5ffc335f2dc31de185ca8c9f183", null ],
+    [ "gff_setup_solver", "namespacegridfire__mod.html#abb95b0aa3e2446b2ea94c7f0e67887a3", null ],
+    [ "multi_zone", "namespacegridfire__mod.html#a9f5a047acbb12c43ca8c6ce46daf42f3", null ],
+    [ "single_zone", "namespacegridfire__mod.html#ace5f00c48b7d638def9833111aa65c38", null ]
 ];
\ No newline at end of file
diff --git a/docs/html/namespacemembers.html b/docs/html/namespacemembers.html
index 82cb278e..a0565441 100644
--- a/docs/html/namespacemembers.html
+++ b/docs/html/namespacemembers.html
@@ -3,16 +3,18 @@
 <head>
 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Namespace Members</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
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+$(function(){initNavTree('namespacemembers.html',''); initResizable(true); });
 /* @license-end */
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 <div id="doc-content">
@@ -96,12 +103,18 @@ $(document).ready(function(){initNavTree('namespacemembers.html',''); initResiza
 
 <h3><a id="index__5F" name="index__5F"></a>- _ -</h3><ul>
 <li>__all__&#160;:&#160;<a class="el" href="namespacegridfire.html#a2adfc910bd5466746bd71490d2cbdf1d">gridfire</a></li>
+<li>__author__&#160;:&#160;<a class="el" href="namespacegridfire.html#a3535aedf8a24266670197a715d91229c">gridfire</a></li>
+<li>__description__&#160;:&#160;<a class="el" href="namespacegridfire.html#a62cc4eb0aa62cc209ee4583b8cc0df52">gridfire</a></li>
+<li>__email__&#160;:&#160;<a class="el" href="namespacegridfire.html#a2aa7da424bb571416c8cfa93147b27ed">gridfire</a></li>
+<li>__license__&#160;:&#160;<a class="el" href="namespacegridfire.html#a23f04b652e06ef7660bed6ce2f36def8">gridfire</a></li>
+<li>__url__&#160;:&#160;<a class="el" href="namespacegridfire.html#a75069cd30950ced7af0da9454e4cc921">gridfire</a></li>
 <li>__version__&#160;:&#160;<a class="el" href="namespacegridfire.html#a14116c4fbbb07c2fa95826dc543771a2">gridfire</a></li>
+<li>_meta&#160;:&#160;<a class="el" href="namespacegridfire.html#acb6c9c1b2920f0d1744a8e7198d2cf5b">gridfire</a></li>
 </ul>
 
 
 <h3><a id="index_a" name="index_a"></a>- a -</h3><ul>
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+<li>ADDouble&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a4562b782e8096986a9b0cc95aa8c1c02">gridfire::engine</a>, <a class="el" href="namespacegridfire_1_1screening.html#ae7dd1a7ccb7bf3c05084094ab008d8a3">gridfire::screening</a></li>
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 <li>build_nuclear_network()&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a7b64607db49cfc042cbee63be5351549">gridfire::engine</a></li>
-<li>BuildDepthType&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a540b6420c7b6271717ec9b640140f6c0">gridfire::engine</a></li>
+<li>BuildDepthType&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">gridfire::engine</a></li>
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@@ -120,23 +133,19 @@ $(document).ready(function(){initNavTree('namespacemembers.html',''); initResiza
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-<h3><a id="index_d" name="index_d"></a>- d -</h3><ul>
-<li>DynamicNetworkSolverStrategy&#160;:&#160;<a class="el" href="namespacegridfire_1_1solver.html#aa32e3cd33f25e8743556a54b6847cdc0">gridfire::solver</a></li>
-</ul>
-
-
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-<li>evolve()&#160;:&#160;<a class="el" href="namespacegridfire__mod.html#aa4e2323274c9a492027a34979ffed973">gridfire_mod</a></li>
-<li>exportEngineToPy()&#160;:&#160;<a class="el" href="namespacegridfire_1_1io_1_1gen.html#a597ff691fb592f7306af96a269117631">gridfire::io::gen</a></li>
+<li>export_engine_to_mesa_net()&#160;:&#160;<a class="el" href="namespacegridfire_1_1io_1_1generative.html#a4fc5d84b9793ea33dcb4619094287008">gridfire::io::generative</a></li>
+<li>exportEngineToPy()&#160;:&#160;<a class="el" href="namespacegridfire_1_1io_1_1gen.html#a4b6cc430d1b8c3b9d329914b915869c6">gridfire::io::gen</a></li>
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 </ul>
 
 
 <h3><a id="index_f" name="index_f"></a>- f -</h3><ul>
+<li>fast_mix()&#160;:&#160;<a class="el" href="namespacegridfire_1_1utils.html#a41c5614fd788bee1061f628ad0085a21">gridfire::utils</a></li>
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+<li>formatNuclearTimescaleLogString()&#160;:&#160;<a class="el" href="namespacegridfire_1_1utils.html#ab1cdad5a93d4674e902861917ae7fd6b">gridfire::utils</a></li>
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 <h3><a id="index_g" name="index_g"></a>- g -</h3><ul>
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-<li>get_last_error()&#160;:&#160;<a class="el" href="namespacegridfire__mod.html#afdb6d3ff7765f7bec167afab2797ebac">gridfire_mod</a></li>
+<li>get_max_scratchpad_types()&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a7fa4b4931eb98910018ecb9e6d37a778">gridfire::engine::scratch</a></li>
+<li>get_mesa_iso_name()&#160;:&#160;<a class="el" href="namespacegridfire_1_1io_1_1generative.html#aff53d5d630dc7bc645cc59e65a95d66f">gridfire::io::generative</a></li>
+<li>get_mesa_reaction_name()&#160;:&#160;<a class="el" href="namespacegridfire_1_1io_1_1generative.html#ac38b31cff5bee6bf41396f6a960bb5e6">gridfire::io::generative</a></li>
+<li>get_scratchpad_type_name()&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#aca27b37993186128808c8fdd96c54849">gridfire::engine::scratch</a></li>
+<li>get_state()&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">gridfire::engine::scratch</a></li>
+<li>gf_author()&#160;:&#160;<a class="el" href="namespacegridfire.html#a1de3db5e65a2e834c55f458307cab68e">gridfire</a></li>
 <li>gf_bad_collection_error&#160;:&#160;<a class="el" href="namespacegridfire__mod.html#a244769a94919381fd624416c41519147a0c0949689c7b4d78cbfe62ac6643d496">gridfire_mod</a></li>
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+<li>gf_collaboration()&#160;:&#160;<a class="el" href="namespacegridfire.html#a454366ce631749963d3c6b387bcbc3e7">gridfire</a></li>
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-<li>primeNetwork()&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#aa6552165b4b36ea227479567880d8402">gridfire::engine</a></li>
+<li>primeNetwork()&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a59778f067222e7c5e8932a7101b25807">gridfire::engine</a></li>
 <li>print_table()&#160;:&#160;<a class="el" href="namespacegridfire_1_1utils.html#acbaa76c5f4021940995e274a86c2171a">gridfire::utils</a></li>
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+<li>report_limiting_species()&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine_1_1diagnostics.html#a2b0b9806c3825d2cc8d68c94a63ca1c6">gridfire::engine::diagnostics</a></li>
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
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-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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 /* @license-end */
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+</script>
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-  $(document).ready(function() { init_search(); });
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+<li>ADDouble&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a4562b782e8096986a9b0cc95aa8c1c02">gridfire::engine</a>, <a class="el" href="namespacegridfire_1_1screening.html#ae7dd1a7ccb7bf3c05084094ab008d8a3">gridfire::screening</a></li>
+<li>BuildDepthType&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a55cd7c313bbfafd5b6a1bcd6329ed99b">gridfire::engine</a></li>
+<li>JacobianEntry&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#aa7b127f4fe99188e3d94ff11608d54f0">gridfire::engine</a></li>
+<li>MultiZoneDynamicNetworkSolver&#160;:&#160;<a class="el" href="namespacegridfire_1_1solver.html#a521165ce7610e3438607af6500f82fdd">gridfire::solver</a></li>
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+<li>SingleZoneDynamicNetworkSolver&#160;:&#160;<a class="el" href="namespacegridfire_1_1solver.html#a3ba32e30d3e30cbbca5ffb22dff077ee">gridfire::solver</a></li>
+<li>SparsityPattern&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a9de1791ec719c0a9b76b835703336870">gridfire::engine</a></li>
+<li>TimestepCallback&#160;:&#160;<a class="el" href="namespacegridfire_1_1solver.html#a472214bac45251c72c311af1d615e6ea">gridfire::solver</a></li>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/namespacemembers_vars.html b/docs/html/namespacemembers_vars.html
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 <head>
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+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Namespace Members</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
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 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
-  initMenu('',true,false,'search.php','Search');
-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
 });
 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('namespacemembers_vars.html',''); initResizable(); });
+$(function(){initNavTree('namespacemembers_vars.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
@@ -94,7 +101,13 @@ $(document).ready(function(){initNavTree('namespacemembers_vars.html',''); initR
 <div class="contents">
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 <li>__all__&#160;:&#160;<a class="el" href="namespacegridfire.html#a2adfc910bd5466746bd71490d2cbdf1d">gridfire</a></li>
+<li>__author__&#160;:&#160;<a class="el" href="namespacegridfire.html#a3535aedf8a24266670197a715d91229c">gridfire</a></li>
+<li>__description__&#160;:&#160;<a class="el" href="namespacegridfire.html#a62cc4eb0aa62cc209ee4583b8cc0df52">gridfire</a></li>
+<li>__email__&#160;:&#160;<a class="el" href="namespacegridfire.html#a2aa7da424bb571416c8cfa93147b27ed">gridfire</a></li>
+<li>__license__&#160;:&#160;<a class="el" href="namespacegridfire.html#a23f04b652e06ef7660bed6ce2f36def8">gridfire</a></li>
+<li>__url__&#160;:&#160;<a class="el" href="namespacegridfire.html#a75069cd30950ced7af0da9454e4cc921">gridfire</a></li>
 <li>__version__&#160;:&#160;<a class="el" href="namespacegridfire.html#a14116c4fbbb07c2fa95826dc543771a2">gridfire</a></li>
+<li>_meta&#160;:&#160;<a class="el" href="namespacegridfire.html#acb6c9c1b2920f0d1744a8e7198d2cf5b">gridfire</a></li>
 <li>basePartitionTypeToString&#160;:&#160;<a class="el" href="namespacegridfire_1_1partition.html#a97237521bc760f7521346f8db472dc8e">gridfire::partition</a></li>
 <li>cvode_ret_code_map&#160;:&#160;<a class="el" href="namespacegridfire_1_1utils.html#a06d386929b2274e2593b97868be2ac51">gridfire::utils</a></li>
 <li>InterpolationErrorTypeMap&#160;:&#160;<a class="el" href="namespacegridfire_1_1rates_1_1weak.html#a7a262a98e1956c33645bad4eb4e40c7a">gridfire::rates::weak</a></li>
@@ -103,12 +116,14 @@ $(document).ready(function(){initNavTree('namespacemembers_vars.html',''); initR
 <li>MIN_ABUNDANCE_TO_CONTRIBUTE_TO_JACOBIAN&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#ae769a7e049c0b79e58675103b21f918f">gridfire::engine</a></li>
 <li>MIN_DENSITY_THRESHOLD&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#acbe76badc77637ba89e4017130d110b1">gridfire::engine</a></li>
 <li>MIN_JACOBIAN_THRESHOLD&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#ad84c68dc3c04ab08a9dc8cee5fde28dd">gridfire::engine</a></li>
+<li>multi_zone&#160;:&#160;<a class="el" href="namespacegridfire__mod.html#a9f5a047acbb12c43ca8c6ce46daf42f3">gridfire_mod</a></li>
 <li>PrimingReportStatusStrings&#160;:&#160;<a class="el" href="namespacegridfire_1_1engine.html#a1ec7640033e9b4418220e91f17bde16b">gridfire::engine</a></li>
 <li>ReactionPhysicalTypeNames&#160;:&#160;<a class="el" href="namespacegridfire_1_1reaction.html#a773ef58975dc959e4ae03e2e677ab54f">gridfire::reaction</a></li>
 <li>ReactionTypeNames&#160;:&#160;<a class="el" href="namespacegridfire_1_1reaction.html#ac06a7c50ac58fb2f901d778fc30cd1cf">gridfire::reaction</a></li>
 <li>RT_TEMPERATURE_GRID_T9&#160;:&#160;<a class="el" href="namespacegridfire_1_1partition.html#a1e08a3c20c55bc6fa4a4ecdf7ea57b8f">gridfire::partition</a></li>
 <li>s_all_reaclib_reactions_ptr&#160;:&#160;<a class="el" href="namespacegridfire_1_1reaclib.html#a1f75b17a44c23261a221f7558b1a63d9">gridfire::reaclib</a></li>
 <li>s_initialized&#160;:&#160;<a class="el" href="namespacegridfire_1_1reaclib.html#af6ff0dfe7ffe34c73ba9acbab5ef8a66">gridfire::reaclib</a></li>
+<li>single_zone&#160;:&#160;<a class="el" href="namespacegridfire__mod.html#ace5f00c48b7d638def9833111aa65c38">gridfire_mod</a></li>
 <li>stringToBasePartitionType&#160;:&#160;<a class="el" href="namespacegridfire_1_1partition.html#a84de6308486d35ce8bc1a9dea52dfa4a">gridfire::partition</a></li>
 <li>UNIFIED_WEAK_DATA&#160;:&#160;<a class="el" href="namespacegridfire_1_1rates_1_1weak.html#ac48364695089056d9a9b10689c4338e7">gridfire::rates::weak</a></li>
 </ul>
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 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/namespaces.html b/docs/html/namespaces.html
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--- a/docs/html/namespaces.html
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 <head>
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 <meta http-equiv="X-UA-Compatible" content="IE=11"/>
-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
 <title>GridFire: Namespace List</title>
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -27,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
@@ -36,19 +38,24 @@
 </table>
 </div>
 <!-- end header part -->
-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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 /* @license-end */
 </script>
@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('namespaces.html',''); initResizable(); });
+$(function(){initNavTree('namespaces.html',''); initResizable(true); });
 /* @license-end */
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@@ -96,172 +103,34 @@ $(document).ready(function(){initNavTree('namespaces.html',''); initResizable();
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 <div class="contents">
 <div class="textblock">Here is a list of all namespaces with brief descriptions:</div><div class="directory">
-<div class="levels">[detail level <span onclick="javascript:toggleLevel(1);">1</span><span onclick="javascript:toggleLevel(2);">2</span><span onclick="javascript:toggleLevel(3);">3</span><span onclick="javascript:toggleLevel(4);">4</span><span onclick="javascript:toggleLevel(5);">5</span>]</div><table class="directory">
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-<tr id="row_0_0_9_2_0_" class="even" style="display:none;"><td class="entry"><span style="width:80px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSESolver_1_1UserData.html" target="_self">UserData</a></td><td class="desc"></td></tr>
-<tr id="row_0_0_10_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1NetworkJacobian.html" target="_self">NetworkJacobian</a></td><td class="desc">A wrapper class for handling the network Jacobian matrix </td></tr>
-<tr id="row_0_0_11_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1engine_1_1NetworkPrimingEngineView.html" target="_self">NetworkPrimingEngineView</a></td><td class="desc">Provides a view of a <a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> filtered to reactions involving a specified priming species </td></tr>
-<tr id="row_0_0_12_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1PrimingReport.html" target="_self">PrimingReport</a></td><td class="desc">Captures the result of a network priming operation </td></tr>
-<tr id="row_0_0_13_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1engine_1_1StepDerivatives.html" target="_self">StepDerivatives</a></td><td class="desc">Structure holding derivatives and energy generation for a network step </td></tr>
-<tr id="row_0_0_14_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">R</span></span><a class="el" href="conceptgridfire_1_1engine_1_1EngineType.html" target="_self">EngineType</a></td><td class="desc">Concept for types allowed as engine bases in EngineView </td></tr>
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-<tr id="row_0_1_0_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1BadCollectionError.html" target="_self">BadCollectionError</a></td><td class="desc">Exception for invalid composition collection in the engine </td></tr>
-<tr id="row_0_1_1_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1BadRHSEngineError.html" target="_self">BadRHSEngineError</a></td><td class="desc">Exception for errors in calculating the right-hand side (RHS) </td></tr>
-<tr id="row_0_1_2_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1CVODESolverFailureError.html" target="_self">CVODESolverFailureError</a></td><td class="desc">Exception for failures in the CVODE solver </td></tr>
-<tr id="row_0_1_3_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1DebugException.html" target="_self">DebugException</a></td><td class="desc">Exception class for debug-only errors </td></tr>
-<tr id="row_0_1_4_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1EngineError.html" target="_self">EngineError</a></td><td class="desc">Base class for engine-related exceptions </td></tr>
-<tr id="row_0_1_5_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1FailedToPartitionEngineError.html" target="_self">FailedToPartitionEngineError</a></td><td class="desc">Exception for failures in partitioning the engine </td></tr>
-<tr id="row_0_1_6_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1GridFireError.html" target="_self">GridFireError</a></td><td class="desc">Base class for GridFire exceptions </td></tr>
-<tr id="row_0_1_7_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1HashingError.html" target="_self">HashingError</a></td><td class="desc">Exception class for hashing-related errors in GridFire </td></tr>
-<tr id="row_0_1_8_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1IllConditionedJacobianError.html" target="_self">IllConditionedJacobianError</a></td><td class="desc">Exception thrown when the Jacobian matrix is ill-conditioned </td></tr>
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-<tr id="row_0_1_11_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1KINSolSolverFailureError.html" target="_self">KINSolSolverFailureError</a></td><td class="desc">Exception for failures in the KINSOL solver </td></tr>
-<tr id="row_0_1_12_" class="odd" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1MissingBaseReactionError.html" target="_self">MissingBaseReactionError</a></td><td class="desc">Exception thrown when a required reaction is missing from the underlying database (e.g., REACLIB) </td></tr>
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-<tr id="row_0_10_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_0_10_" class="arrow" onclick="toggleFolder('0_10_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1trigger.html" target="_self">trigger</a></td><td class="desc"></td></tr>
-<tr id="row_0_10_0_" class="even" style="display:none;"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_0_10_0_" class="arrow" onclick="toggleFolder('0_10_0_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1trigger_1_1solver.html" target="_self">solver</a></td><td class="desc"></td></tr>
-<tr id="row_0_10_0_0_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span id="arr_0_10_0_0_" class="arrow" onclick="toggleFolder('0_10_0_0_')">&#9658;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacegridfire_1_1trigger_1_1solver_1_1CVODE.html" target="_self">CVODE</a></td><td class="desc"></td></tr>
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-<tr id="row_0_10_2_" class="even" style="display:none;"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1trigger_1_1EveryNthTrigger.html" target="_self">EveryNthTrigger</a></td><td class="desc">Pass-through trigger that fires every Nth time its child trigger is true </td></tr>
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-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1NetworkJacobian_01_4.html">formatter&lt; gridfire::engine::NetworkJacobian &gt;</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1_network_jacobian_01_4.html">formatter&lt; gridfire::engine::NetworkJacobian &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_01_4.html">formatter&lt; gridfire::engine::scratch::AbstractScratchPad &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_01_4.html">formatter&lt; gridfire::engine::scratch::AdaptiveEngineViewScratchPad &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.html">formatter&lt; gridfire::engine::scratch::DefinedEngineViewScratchPad &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_01_4.html">formatter&lt; gridfire::engine::scratch::GraphEngineScratchPad &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_01_4.html">formatter&lt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_scratch_pad_type_01_4.html">formatter&lt; gridfire::engine::scratch::ScratchPadType &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4.html">formatter&lt; gridfire::engine::scratch::StateBlob &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1_net_in_01_4.html">formatter&lt; gridfire::NetIn &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4.html">formatter&lt; gridfire::NetOut &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1policy_1_1_main_sequence_policy_01_4.html">formatter&lt; gridfire::policy::MainSequencePolicy &gt;</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1policy_1_1_network_policy_01_4.html">formatter&lt; gridfire::policy::NetworkPolicy &gt;</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><b>forward_list</b></td></tr>
 <tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">STL class. <br /></td></tr>
@@ -198,11 +227,11 @@ Classes</h2></td></tr>
 <tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><b>fstream</b></td></tr>
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 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1TableAxes_01_4.html">hash&lt; gridfire::rates::weak::TableAxes &gt;</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1_table_axes_01_4.html">hash&lt; gridfire::rates::weak::TableAxes &gt;</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1Reaction_01_4.html">hash&lt; gridfire::reaction::Reaction &gt;</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html">hash&lt; gridfire::reaction::Reaction &gt;</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1ReactionSet_01_4.html">hash&lt; gridfire::reaction::ReactionSet &gt;</a></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html">hash&lt; gridfire::reaction::ReactionSet &gt;</a></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><b>ifstream</b></td></tr>
 <tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">STL class. <br /></td></tr>
@@ -264,6 +293,9 @@ Classes</h2></td></tr>
 <tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><b>overflow_error</b></td></tr>
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 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><b>pair</b></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">STL class. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><b>priority_queue</b></td></tr>
 <tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">STL class. <br /></td></tr>
 <tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
@@ -414,7 +446,7 @@ Classes</h2></td></tr>
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
     <li class="navelem"><a class="el" href="namespacestd.html">std</a></li>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
 </div>
 </body>
diff --git a/docs/html/namespacestd.js b/docs/html/namespacestd.js
index 1adafb1e..3b5e1962 100644
--- a/docs/html/namespacestd.js
+++ b/docs/html/namespacestd.js
@@ -1,7 +1,18 @@
 var namespacestd =
 [
-    [ "formatter< gridfire::engine::NetworkJacobian >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1NetworkJacobian_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1NetworkJacobian_01_4" ],
-    [ "hash< gridfire::rates::weak::TableAxes >", "structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1TableAxes_01_4.html", "structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1TableAxes_01_4" ],
-    [ "hash< gridfire::reaction::Reaction >", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1Reaction_01_4.html", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1Reaction_01_4" ],
-    [ "hash< gridfire::reaction::ReactionSet >", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1ReactionSet_01_4.html", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1ReactionSet_01_4" ]
+    [ "formatter< gridfire::engine::NetworkJacobian >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1_network_jacobian_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1_network_jacobian_01_4" ],
+    [ "formatter< gridfire::engine::scratch::AbstractScratchPad >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_01_4" ],
+    [ "formatter< gridfire::engine::scratch::AdaptiveEngineViewScratchPad >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_01_4" ],
+    [ "formatter< gridfire::engine::scratch::DefinedEngineViewScratchPad >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4" ],
+    [ "formatter< gridfire::engine::scratch::GraphEngineScratchPad >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_01_4" ],
+    [ "formatter< gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_01_4" ],
+    [ "formatter< gridfire::engine::scratch::ScratchPadType >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_scratch_pad_type_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_scratch_pad_type_01_4" ],
+    [ "formatter< gridfire::engine::scratch::StateBlob >", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4" ],
+    [ "formatter< gridfire::NetIn >", "structstd_1_1formatter_3_01gridfire_1_1_net_in_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1_net_in_01_4" ],
+    [ "formatter< gridfire::NetOut >", "structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4" ],
+    [ "formatter< gridfire::policy::MainSequencePolicy >", "structstd_1_1formatter_3_01gridfire_1_1policy_1_1_main_sequence_policy_01_4.html", null ],
+    [ "formatter< gridfire::policy::NetworkPolicy >", "structstd_1_1formatter_3_01gridfire_1_1policy_1_1_network_policy_01_4.html", "structstd_1_1formatter_3_01gridfire_1_1policy_1_1_network_policy_01_4" ],
+    [ "hash< gridfire::rates::weak::TableAxes >", "structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1_table_axes_01_4.html", "structstd_1_1hash_3_01gridfire_1_1rates_1_1weak_1_1_table_axes_01_4" ],
+    [ "hash< gridfire::reaction::Reaction >", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4" ],
+    [ "hash< gridfire::reaction::ReactionSet >", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html", "structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4" ]
 ];
\ No newline at end of file
diff --git a/docs/html/navtree.js b/docs/html/navtree.js
index 93dd3d46..2d4fa84a 100644
--- a/docs/html/navtree.js
+++ b/docs/html/navtree.js
@@ -22,538 +22,462 @@
 
  @licend  The above is the entire license notice for the JavaScript code in this file
  */
-var navTreeSubIndices = new Array();
-var arrowDown = '&#9660;';
-var arrowRight = '&#9658;';
 
-function getData(varName)
-{
-  var i = varName.lastIndexOf('/');
-  var n = i>=0 ? varName.substring(i+1) : varName;
-  return eval(n.replace(/\-/g,'_'));
-}
+function initNavTree(toroot,relpath) {
+  let navTreeSubIndices = [];
+  const ARROW_DOWN = '&#9660;';
+  const ARROW_RIGHT = '&#9658;';
+  const NAVPATH_COOKIE_NAME = ''+'navpath';
 
-function stripPath(uri)
-{
-  return uri.substring(uri.lastIndexOf('/')+1);
-}
-
-function stripPath2(uri)
-{
-  var i = uri.lastIndexOf('/');
-  var s = uri.substring(i+1);
-  var m = uri.substring(0,i+1).match(/\/d\w\/d\w\w\/$/);
-  return m ? uri.substring(i-6) : s;
-}
-
-function hashValue()
-{
-  return $(location).attr('hash').substring(1).replace(/[^\w\-]/g,'');
-}
-
-function hashUrl()
-{
-  return '#'+hashValue();
-}
-
-function pathName()
-{
-  return $(location).attr('pathname').replace(/[^-A-Za-z0-9+&@#/%?=~_|!:,.;\(\)]/g, '');
-}
-
-function localStorageSupported()
-{
-  try {
-    return 'localStorage' in window && window['localStorage'] !== null && window.localStorage.getItem;
+  const getData = function(varName) {
+    const i = varName.lastIndexOf('/');
+    const n = i>=0 ? varName.substring(i+1) : varName;
+    return eval(n.replace(/-/g,'_'));
   }
-  catch(e) {
-    return false;
+
+  const stripPath = function(uri) {
+    return uri.substring(uri.lastIndexOf('/')+1);
   }
-}
 
-function storeLink(link)
-{
-  if (!$("#nav-sync").hasClass('sync') && localStorageSupported()) {
-      window.localStorage.setItem('navpath',link);
+  const stripPath2 = function(uri) {
+    const i = uri.lastIndexOf('/');
+    const s = uri.substring(i+1);
+    const m = uri.substring(0,i+1).match(/\/d\w\/d\w\w\/$/);
+    return m ? uri.substring(i-6) : s;
   }
-}
 
-function deleteLink()
-{
-  if (localStorageSupported()) {
-    window.localStorage.setItem('navpath','');
+  const hashValue = function() {
+    return $(location).attr('hash').substring(1).replace(/[^\w-]/g,'');
   }
-}
 
-function cachedLink()
-{
-  if (localStorageSupported()) {
-    return window.localStorage.getItem('navpath');
-  } else {
-    return '';
+  const hashUrl = function() {
+    return '#'+hashValue();
   }
-}
 
-function getScript(scriptName,func)
-{
-  var head = document.getElementsByTagName("head")[0];
-  var script = document.createElement('script');
-  script.id = scriptName;
-  script.type = 'text/javascript';
-  script.onload = func;
-  script.src = scriptName+'.js';
-  head.appendChild(script);
-}
+  const pathName = function() {
+    return $(location).attr('pathname').replace(/[^-A-Za-z0-9+&@#/%?=~_|!:,.;()]/g, '');
+  }
 
-function createIndent(o,domNode,node,level)
-{
-  var level=-1;
-  var n = node;
-  while (n.parentNode) { level++; n=n.parentNode; }
-  if (node.childrenData) {
-    var imgNode = document.createElement("span");
-    imgNode.className = 'arrow';
-    imgNode.style.paddingLeft=(16*level).toString()+'px';
-    imgNode.innerHTML=arrowRight;
-    node.plus_img = imgNode;
-    node.expandToggle = document.createElement("a");
-    node.expandToggle.href = "javascript:void(0)";
-    node.expandToggle.onclick = function() {
-      if (node.expanded) {
-        $(node.getChildrenUL()).slideUp("fast");
-        node.plus_img.innerHTML=arrowRight;
-        node.expanded = false;
-      } else {
-        expandNode(o, node, false, true);
-      }
+  const storeLink = function(link) {
+    if (!$("#nav-sync").hasClass('sync')) {
+      Cookie.writeSetting(NAVPATH_COOKIE_NAME,link,0);
     }
-    node.expandToggle.appendChild(imgNode);
-    domNode.appendChild(node.expandToggle);
-  } else {
-    var span = document.createElement("span");
-    span.className = 'arrow';
-    span.style.width   = 16*(level+1)+'px';
-    span.innerHTML = '&#160;';
-    domNode.appendChild(span);
   }
-}
 
-var animationInProgress = false;
-
-function gotoAnchor(anchor,aname,updateLocation)
-{
-  var pos, docContent = $('#doc-content');
-  var ancParent = $(anchor.parent());
-  if (ancParent.hasClass('memItemLeft') ||
-      ancParent.hasClass('memtitle') ||
-      ancParent.hasClass('fieldname') ||
-      ancParent.hasClass('fieldtype') ||
-      ancParent.is(':header'))
-  {
-    pos = ancParent.position().top;
-  } else if (anchor.position()) {
-    pos = anchor.position().top;
+  const deleteLink = function() {
+    Cookie.eraseSetting(NAVPATH_COOKIE_NAME);
   }
-  if (pos) {
-    var dist = Math.abs(Math.min(
-               pos-docContent.offset().top,
-               docContent[0].scrollHeight-
-               docContent.height()-docContent.scrollTop()));
-    animationInProgress=true;
-    docContent.animate({
-      scrollTop: pos + docContent.scrollTop() - docContent.offset().top
-    },Math.max(50,Math.min(500,dist)),function(){
-      if (updateLocation) window.location.href=aname;
-      animationInProgress=false;
-    });
+
+  const cachedLink = function() {
+    return Cookie.readSetting(NAVPATH_COOKIE_NAME,'');
   }
-}
 
-function newNode(o, po, text, link, childrenData, lastNode)
-{
-  var node = new Object();
-  node.children = Array();
-  node.childrenData = childrenData;
-  node.depth = po.depth + 1;
-  node.relpath = po.relpath;
-  node.isLast = lastNode;
+  const getScript = function(scriptName,func) {
+    const head = document.getElementsByTagName("head")[0];
+    const script = document.createElement('script');
+    script.id = scriptName;
+    script.type = 'text/javascript';
+    script.onload = func;
+    script.src = scriptName+'.js';
+    head.appendChild(script);
+  }
 
-  node.li = document.createElement("li");
-  po.getChildrenUL().appendChild(node.li);
-  node.parentNode = po;
-
-  node.itemDiv = document.createElement("div");
-  node.itemDiv.className = "item";
-
-  node.labelSpan = document.createElement("span");
-  node.labelSpan.className = "label";
-
-  createIndent(o,node.itemDiv,node,0);
-  node.itemDiv.appendChild(node.labelSpan);
-  node.li.appendChild(node.itemDiv);
-
-  var a = document.createElement("a");
-  node.labelSpan.appendChild(a);
-  node.label = document.createTextNode(text);
-  node.expanded = false;
-  a.appendChild(node.label);
-  if (link) {
-    var url;
-    if (link.substring(0,1)=='^') {
-      url = link.substring(1);
-      link = url;
-    } else {
-      url = node.relpath+link;
-    }
-    a.className = stripPath(link.replace('#',':'));
-    if (link.indexOf('#')!=-1) {
-      var aname = '#'+link.split('#')[1];
-      var srcPage = stripPath(pathName());
-      var targetPage = stripPath(link.split('#')[0]);
-      a.href = srcPage!=targetPage ? url : "javascript:void(0)";
-      a.onclick = function(){
-        storeLink(link);
-        if (!$(a).parent().parent().hasClass('selected'))
-        {
-          $('.item').removeClass('selected');
-          $('.item').removeAttr('id');
-          $(a).parent().parent().addClass('selected');
-          $(a).parent().parent().attr('id','selected');
+  const createIndent = function(o,domNode,node) {
+    let level=-1;
+    let n = node;
+    while (n.parentNode) { level++; n=n.parentNode; }
+    if (node.childrenData) {
+      const imgNode = document.createElement("span");
+      imgNode.className = 'arrow';
+      imgNode.style.paddingLeft=(16*level).toString()+'px';
+      imgNode.innerHTML=ARROW_RIGHT;
+      node.plus_img = imgNode;
+      node.expandToggle = document.createElement("a");
+      node.expandToggle.href = "javascript:void(0)";
+      node.expandToggle.onclick = function() {
+        if (node.expanded) {
+          $(node.getChildrenUL()).slideUp("fast");
+          node.plus_img.innerHTML=ARROW_RIGHT;
+          node.expanded = false;
+        } else {
+          expandNode(o, node, false, true);
         }
-        var anchor = $(aname);
-        gotoAnchor(anchor,aname,true);
-      };
+      }
+      node.expandToggle.appendChild(imgNode);
+      domNode.appendChild(node.expandToggle);
     } else {
-      a.href = url;
-      a.onclick = function() { storeLink(link); }
+      let span = document.createElement("span");
+      span.className = 'arrow';
+      span.style.width   = 16*(level+1)+'px';
+      span.innerHTML = '&#160;';
+      domNode.appendChild(span);
     }
-  } else {
-    if (childrenData != null)
-    {
+  }
+
+  let animationInProgress = false;
+
+  const gotoAnchor = function(anchor,aname) {
+    let pos, docContent = $('#doc-content');
+    let ancParent = $(anchor.parent());
+    if (ancParent.hasClass('memItemLeft') || ancParent.hasClass('memtitle')  ||
+        ancParent.hasClass('fieldname')   || ancParent.hasClass('fieldtype') ||
+        ancParent.is(':header')) {
+      pos = ancParent.offset().top;
+    } else if (anchor.position()) {
+      pos = anchor.offset().top;
+    }
+    if (pos) {
+      const dcOffset    = docContent.offset().top;
+      const dcHeight    = docContent.height();
+      const dcScrHeight = docContent[0].scrollHeight
+      const dcScrTop    = docContent.scrollTop();
+      let dist = Math.abs(Math.min(pos-dcOffset,dcScrHeight-dcHeight-dcScrTop));
+      animationInProgress = true;
+      docContent.animate({
+        scrollTop: pos + dcScrTop - dcOffset
+      },Math.max(50,Math.min(500,dist)),function() {
+        animationInProgress=false;
+        if (anchor.parent().attr('class')=='memItemLeft') {
+          let rows = $('.memberdecls tr[class$="'+hashValue()+'"]');
+          glowEffect(rows.children(),300); // member without details
+        } else if (anchor.parent().attr('class')=='fieldname') {
+          glowEffect(anchor.parent().parent(),1000); // enum value
+        } else if (anchor.parent().attr('class')=='fieldtype') {
+          glowEffect(anchor.parent().parent(),1000); // struct field
+        } else if (anchor.parent().is(":header")) {
+          glowEffect(anchor.parent(),1000); // section header
+        } else {
+          glowEffect(anchor.next(),1000); // normal member
+        }
+      });
+    }
+  }
+
+  const newNode = function(o, po, text, link, childrenData, lastNode) {
+    const node = {
+      children     : [],
+      childrenData : childrenData,
+      depth        : po.depth + 1,
+      relpath      : po.relpath,
+      isLast       : lastNode,
+      li           : document.createElement("li"),
+      parentNode   : po,
+      itemDiv      : document.createElement("div"),
+      labelSpan    : document.createElement("span"),
+      label        : document.createTextNode(text),
+      expanded     : false,
+      childrenUL   : null,
+      getChildrenUL : function() {
+        if (!this.childrenUL) {
+          this.childrenUL = document.createElement("ul");
+          this.childrenUL.className = "children_ul";
+          this.childrenUL.style.display = "none";
+          this.li.appendChild(node.childrenUL);
+        }
+        return node.childrenUL;
+      },
+    };
+
+    node.itemDiv.className = "item";
+    node.labelSpan.className = "label";
+    createIndent(o,node.itemDiv,node);
+    node.itemDiv.appendChild(node.labelSpan);
+    node.li.appendChild(node.itemDiv);
+
+    const a = document.createElement("a");
+    node.labelSpan.appendChild(a);
+    po.getChildrenUL().appendChild(node.li);
+    a.appendChild(node.label);
+    if (link) {
+      let url;
+      if (link.substring(0,1)=='^') {
+        url = link.substring(1);
+        link = url;
+      } else {
+        url = node.relpath+link;
+      }
+      a.className = stripPath(link.replace('#',':'));
+      if (link.indexOf('#')!=-1) {
+        const aname = '#'+link.split('#')[1];
+        const srcPage = stripPath(pathName());
+        const targetPage = stripPath(link.split('#')[0]);
+        a.href = srcPage!=targetPage ? url : aname;
+        a.onclick = function() {
+          storeLink(link);
+          aPPar = $(a).parent().parent();
+          if (!aPPar.hasClass('selected')) {
+            $('.item').removeClass('selected');
+            $('.item').removeAttr('id');
+            aPPar.addClass('selected');
+            aPPar.attr('id','selected');
+          }
+          const anchor = $(aname);
+          gotoAnchor(anchor,aname);
+        };
+      } else {
+        a.href = url;
+        a.onclick = () => storeLink(link);
+      }
+    } else if (childrenData != null) {
       a.className = "nolink";
       a.href = "javascript:void(0)";
       a.onclick = node.expandToggle.onclick;
     }
+    return node;
   }
 
-  node.childrenUL = null;
-  node.getChildrenUL = function() {
-    if (!node.childrenUL) {
-      node.childrenUL = document.createElement("ul");
-      node.childrenUL.className = "children_ul";
-      node.childrenUL.style.display = "none";
-      node.li.appendChild(node.childrenUL);
-    }
-    return node.childrenUL;
-  };
-
-  return node;
-}
-
-function showRoot()
-{
-  var headerHeight = $("#top").height();
-  var footerHeight = $("#nav-path").height();
-  var windowHeight = $(window).height() - headerHeight - footerHeight;
-  (function (){ // retry until we can scroll to the selected item
-    try {
-      var navtree=$('#nav-tree');
-      navtree.scrollTo('#selected',100,{offset:-windowHeight/2});
-    } catch (err) {
-      setTimeout(arguments.callee, 0);
-    }
-  })();
-}
-
-function expandNode(o, node, imm, setFocus)
-{
-  if (node.childrenData && !node.expanded) {
-    if (typeof(node.childrenData)==='string') {
-      var varName    = node.childrenData;
-      getScript(node.relpath+varName,function(){
-        node.childrenData = getData(varName);
-        expandNode(o, node, imm, setFocus);
-      });
-    } else {
-      if (!node.childrenVisited) {
-        getNode(o, node);
+  const showRoot = function() {
+    const headerHeight = $("#top").height();
+    const footerHeight = $("#nav-path").height();
+    const windowHeight = $(window).height() - headerHeight - footerHeight;
+    (function() { // retry until we can scroll to the selected item
+      try {
+        const navtree=$('#nav-tree');
+        navtree.scrollTo('#selected',100,{offset:-windowHeight/2});
+      } catch (err) {
+        setTimeout(arguments.callee, 0);
       }
-      $(node.getChildrenUL()).slideDown("fast");
-      node.plus_img.innerHTML = arrowDown;
-      node.expanded = true;
-      if (setFocus) {
-        $(node.expandToggle).focus();
-      }
-    }
+    })();
   }
-}
 
-function glowEffect(n,duration)
-{
-  n.addClass('glow').delay(duration).queue(function(next){
-    $(this).removeClass('glow');next();
-  });
-}
-
-function highlightAnchor()
-{
-  var aname = hashUrl();
-  var anchor = $(aname);
-  if (anchor.parent().attr('class')=='memItemLeft'){
-    var rows = $('.memberdecls tr[class$="'+hashValue()+'"]');
-    glowEffect(rows.children(),300); // member without details
-  } else if (anchor.parent().attr('class')=='fieldname'){
-    glowEffect(anchor.parent().parent(),1000); // enum value
-  } else if (anchor.parent().attr('class')=='fieldtype'){
-    glowEffect(anchor.parent().parent(),1000); // struct field
-  } else if (anchor.parent().is(":header")) {
-    glowEffect(anchor.parent(),1000); // section header
-  } else {
-    glowEffect(anchor.next(),1000); // normal member
-  }
-}
-
-function selectAndHighlight(hash,n)
-{
-  var a;
-  if (hash) {
-    var link=stripPath(pathName())+':'+hash.substring(1);
-    a=$('.item a[class$="'+link+'"]');
-  }
-  if (a && a.length) {
-    a.parent().parent().addClass('selected');
-    a.parent().parent().attr('id','selected');
-    highlightAnchor();
-  } else if (n) {
-    $(n.itemDiv).addClass('selected');
-    $(n.itemDiv).attr('id','selected');
-  }
-  var topOffset=5;
-  if (typeof page_layout!=='undefined' && page_layout==1) {
-    topOffset+=$('#top').outerHeight();
-  }
-  if ($('#nav-tree-contents .item:first').hasClass('selected')) {
-    topOffset+=25;
-  }
-  $('#nav-sync').css('top',topOffset+'px');
-  showRoot();
-}
-
-function showNode(o, node, index, hash)
-{
-  if (node && node.childrenData) {
-    if (typeof(node.childrenData)==='string') {
-      var varName    = node.childrenData;
-      getScript(node.relpath+varName,function(){
-        node.childrenData = getData(varName);
-        showNode(o,node,index,hash);
-      });
-    } else {
-      if (!node.childrenVisited) {
-        getNode(o, node);
-      }
-      $(node.getChildrenUL()).css({'display':'block'});
-      node.plus_img.innerHTML = arrowDown;
-      node.expanded = true;
-      var n = node.children[o.breadcrumbs[index]];
-      if (index+1<o.breadcrumbs.length) {
-        showNode(o,n,index+1,hash);
+  const expandNode = function(o, node, imm, setFocus) {
+    if (node.childrenData && !node.expanded) {
+      if (typeof(node.childrenData)==='string') {
+        const varName = node.childrenData;
+        getScript(node.relpath+varName,function() {
+          node.childrenData = getData(varName);
+          expandNode(o, node, imm, setFocus);
+        });
       } else {
-        if (typeof(n.childrenData)==='string') {
-          var varName = n.childrenData;
-          getScript(n.relpath+varName,function(){
+        if (!node.childrenVisited) {
+          getNode(o, node);
+        }
+        $(node.getChildrenUL()).slideDown("fast");
+        node.plus_img.innerHTML = ARROW_DOWN;
+        node.expanded = true;
+        if (setFocus) {
+          $(node.expandToggle).focus();
+        }
+      }
+    }
+  }
+
+  const glowEffect = function(n,duration) {
+    n.addClass('glow').delay(duration).queue(function(next) {
+      $(this).removeClass('glow');next();
+    });
+  }
+
+  const highlightAnchor = function() {
+    const aname = hashUrl();
+    const anchor = $(aname);
+    gotoAnchor(anchor,aname);
+  }
+
+  const selectAndHighlight = function(hash,n) {
+    let a;
+    if (hash) {
+      const link=stripPath(pathName())+':'+hash.substring(1);
+      a=$('.item a[class$="'+link+'"]');
+    }
+    if (a && a.length) {
+      a.parent().parent().addClass('selected');
+      a.parent().parent().attr('id','selected');
+      highlightAnchor();
+    } else if (n) {
+      $(n.itemDiv).addClass('selected');
+      $(n.itemDiv).attr('id','selected');
+    }
+    let topOffset=5;
+    if ($('#nav-tree-contents .item:first').hasClass('selected')) {
+      topOffset+=25;
+    }
+    $('#nav-sync').css('top',topOffset+'px');
+    showRoot();
+  }
+
+  const showNode = function(o, node, index, hash) {
+    if (node && node.childrenData) {
+      if (typeof(node.childrenData)==='string') {
+        const varName = node.childrenData;
+        getScript(node.relpath+varName,function() {
+          node.childrenData = getData(varName);
+          showNode(o,node,index,hash);
+        });
+      } else {
+        if (!node.childrenVisited) {
+          getNode(o, node);
+        }
+        $(node.getChildrenUL()).css({'display':'block'});
+        node.plus_img.innerHTML = ARROW_DOWN;
+        node.expanded = true;
+        const n = node.children[o.breadcrumbs[index]];
+        if (index+1<o.breadcrumbs.length) {
+          showNode(o,n,index+1,hash);
+        } else if (typeof(n.childrenData)==='string') {
+          const varName = n.childrenData;
+          getScript(n.relpath+varName,function() {
             n.childrenData = getData(varName);
             node.expanded=false;
             showNode(o,node,index,hash); // retry with child node expanded
           });
         } else {
-          var rootBase = stripPath(o.toroot.replace(/\..+$/, ''));
+          const rootBase = stripPath(o.toroot.replace(/\..+$/, ''));
           if (rootBase=="index" || rootBase=="pages" || rootBase=="search") {
             expandNode(o, n, true, false);
           }
           selectAndHighlight(hash,n);
         }
       }
-    }
-  } else {
-    selectAndHighlight(hash);
-  }
-}
-
-function removeToInsertLater(element) {
-  var parentNode = element.parentNode;
-  var nextSibling = element.nextSibling;
-  parentNode.removeChild(element);
-  return function() {
-    if (nextSibling) {
-      parentNode.insertBefore(element, nextSibling);
     } else {
-      parentNode.appendChild(element);
+      selectAndHighlight(hash);
     }
-  };
-}
+  }
 
-function getNode(o, po)
-{
-  var insertFunction = removeToInsertLater(po.li);
-  po.childrenVisited = true;
-  var l = po.childrenData.length-1;
-  for (var i in po.childrenData) {
-    var nodeData = po.childrenData[i];
-    po.children[i] = newNode(o, po, nodeData[0], nodeData[1], nodeData[2],
-      i==l);
-  }
-  insertFunction();
-}
-
-function gotoNode(o,subIndex,root,hash,relpath)
-{
-  var nti = navTreeSubIndices[subIndex][root+hash];
-  o.breadcrumbs = $.extend(true, [], nti ? nti : navTreeSubIndices[subIndex][root]);
-  if (!o.breadcrumbs && root!=NAVTREE[0][1]) { // fallback: show index
-    navTo(o,NAVTREE[0][1],"",relpath);
-    $('.item').removeClass('selected');
-    $('.item').removeAttr('id');
-  }
-  if (o.breadcrumbs) {
-    o.breadcrumbs.unshift(0); // add 0 for root node
-    showNode(o, o.node, 0, hash);
-  }
-}
-
-function navTo(o,root,hash,relpath)
-{
-  var link = cachedLink();
-  if (link) {
-    var parts = link.split('#');
-    root = parts[0];
-    if (parts.length>1) hash = '#'+parts[1].replace(/[^\w\-]/g,'');
-    else hash='';
-  }
-  if (hash.match(/^#l\d+$/)) {
-    var anchor=$('a[name='+hash.substring(1)+']');
-    glowEffect(anchor.parent(),1000); // line number
-    hash=''; // strip line number anchors
-  }
-  var url=root+hash;
-  var i=-1;
-  while (NAVTREEINDEX[i+1]<=url) i++;
-  if (i==-1) { i=0; root=NAVTREE[0][1]; } // fallback: show index
-  if (navTreeSubIndices[i]) {
-    gotoNode(o,i,root,hash,relpath)
-  } else {
-    getScript(relpath+'navtreeindex'+i,function(){
-      navTreeSubIndices[i] = eval('NAVTREEINDEX'+i);
-      if (navTreeSubIndices[i]) {
-        gotoNode(o,i,root,hash,relpath);
+  const removeToInsertLater = function(element) {
+    const parentNode = element.parentNode;
+    const nextSibling = element.nextSibling;
+    parentNode.removeChild(element);
+    return function() {
+      if (nextSibling) {
+        parentNode.insertBefore(element, nextSibling);
+      } else {
+        parentNode.appendChild(element);
       }
-    });
+    };
   }
-}
 
-function showSyncOff(n,relpath)
-{
-    n.html('<img src="'+relpath+'sync_off.png" title="'+SYNCOFFMSG+'"/>');
-}
-
-function showSyncOn(n,relpath)
-{
-    n.html('<img src="'+relpath+'sync_on.png" title="'+SYNCONMSG+'"/>');
-}
-
-function toggleSyncButton(relpath)
-{
-  var navSync = $('#nav-sync');
-  if (navSync.hasClass('sync')) {
-    navSync.removeClass('sync');
-    showSyncOff(navSync,relpath);
-    storeLink(stripPath2(pathName())+hashUrl());
-  } else {
-    navSync.addClass('sync');
-    showSyncOn(navSync,relpath);
-    deleteLink();
-  }
-}
-
-var loadTriggered = false;
-var readyTriggered = false;
-var loadObject,loadToRoot,loadUrl,loadRelPath;
-
-$(window).on('load',function(){
-  if (readyTriggered) { // ready first
-    navTo(loadObject,loadToRoot,loadUrl,loadRelPath);
-    showRoot();
-  }
-  loadTriggered=true;
-});
-
-function initNavTree(toroot,relpath)
-{
-  var o = new Object();
-  o.toroot = toroot;
-  o.node = new Object();
-  o.node.li = document.getElementById("nav-tree-contents");
-  o.node.childrenData = NAVTREE;
-  o.node.children = new Array();
-  o.node.childrenUL = document.createElement("ul");
-  o.node.getChildrenUL = function() { return o.node.childrenUL; };
-  o.node.li.appendChild(o.node.childrenUL);
-  o.node.depth = 0;
-  o.node.relpath = relpath;
-  o.node.expanded = false;
-  o.node.isLast = true;
-  o.node.plus_img = document.createElement("span");
-  o.node.plus_img.className = 'arrow';
-  o.node.plus_img.innerHTML = arrowRight;
-
-  if (localStorageSupported()) {
-    var navSync = $('#nav-sync');
-    if (cachedLink()) {
-      showSyncOff(navSync,relpath);
-      navSync.removeClass('sync');
-    } else {
-      showSyncOn(navSync,relpath);
+  const getNode = function(o, po) {
+    const insertFunction = removeToInsertLater(po.li);
+    po.childrenVisited = true;
+    const l = po.childrenData.length-1;
+    for (let i in po.childrenData) {
+      const nodeData = po.childrenData[i];
+      po.children[i] = newNode(o, po, nodeData[0], nodeData[1], nodeData[2], i==l);
     }
-    navSync.click(function(){ toggleSyncButton(relpath); });
+    insertFunction();
   }
 
-  if (loadTriggered) { // load before ready
-    navTo(o,toroot,hashUrl(),relpath);
-    showRoot();
-  } else { // ready before load
-    loadObject  = o;
-    loadToRoot  = toroot;
-    loadUrl     = hashUrl();
-    loadRelPath = relpath;
-    readyTriggered=true;
+  const gotoNode = function(o,subIndex,root,hash,relpath) {
+    const nti = navTreeSubIndices[subIndex][root+hash];
+    o.breadcrumbs = $.extend(true, [], nti ? nti : navTreeSubIndices[subIndex][root]);
+    if (!o.breadcrumbs && root!=NAVTREE[0][1]) { // fallback: show index
+      navTo(o,NAVTREE[0][1],"",relpath);
+      $('.item').removeClass('selected');
+      $('.item').removeAttr('id');
+    }
+    if (o.breadcrumbs) {
+      o.breadcrumbs.unshift(0); // add 0 for root node
+      showNode(o, o.node, 0, hash);
+    }
   }
 
-  $(window).bind('hashchange', function(){
-     if (window.location.hash && window.location.hash.length>1){
-       var a;
-       if ($(location).attr('hash')){
-         var clslink=stripPath(pathName())+':'+hashValue();
-         a=$('.item a[class$="'+clslink.replace(/</g,'\\3c ')+'"]');
-       }
-       if (a==null || !$(a).parent().parent().hasClass('selected')){
-         $('.item').removeClass('selected');
-         $('.item').removeAttr('id');
-       }
-       var link=stripPath2(pathName());
-       navTo(o,link,hashUrl(),relpath);
-     } else if (!animationInProgress) {
-       $('#doc-content').scrollTop(0);
-       $('.item').removeClass('selected');
-       $('.item').removeAttr('id');
-       navTo(o,toroot,hashUrl(),relpath);
-     }
-  })
+  const navTo = function(o,root,hash,relpath) {
+    const link = cachedLink();
+    if (link) {
+      const parts = link.split('#');
+      root = parts[0];
+      hash = parts.length>1 ? '#'+parts[1].replace(/[^\w-]/g,'') : '';
+    }
+    if (hash.match(/^#l\d+$/)) {
+      const anchor=$('a[name='+hash.substring(1)+']');
+      glowEffect(anchor.parent(),1000); // line number
+      hash=''; // strip line number anchors
+    }
+    const url=root+hash;
+    let i=-1;
+    while (NAVTREEINDEX[i+1]<=url) i++;
+    if (i==-1) { i=0; root=NAVTREE[0][1]; } // fallback: show index
+    if (navTreeSubIndices[i]) {
+      gotoNode(o,i,root,hash,relpath)
+    } else {
+      getScript(relpath+'navtreeindex'+i,function() {
+        navTreeSubIndices[i] = eval('NAVTREEINDEX'+i);
+        if (navTreeSubIndices[i]) {
+          gotoNode(o,i,root,hash,relpath);
+        }
+      });
+    }
+  }
+
+  const showSyncOff = function(n,relpath) {
+    n.html('<img src="'+relpath+'sync_off.png" title="'+SYNCOFFMSG+'"/>');
+  }
+
+  const showSyncOn = function(n,relpath) {
+    n.html('<img src="'+relpath+'sync_on.png" title="'+SYNCONMSG+'"/>');
+  }
+
+  const o = {
+    toroot : toroot,
+    node   : {
+      childrenData  : NAVTREE,
+      children      : [],
+      childrenUL    : document.createElement("ul"),
+      getChildrenUL : function() { return this.childrenUL },
+      li            : document.getElementById("nav-tree-contents"),
+      depth         : 0,
+      relpath       : relpath,
+      expanded      : false,
+      isLast        : true,
+      plus_img      : document.createElement("span"),
+    },
+  };
+  o.node.li.appendChild(o.node.childrenUL);
+  o.node.plus_img.className = 'arrow';
+  o.node.plus_img.innerHTML = ARROW_RIGHT;
+
+  const navSync = $('#nav-sync');
+  if (cachedLink()) {
+    showSyncOff(navSync,relpath);
+    navSync.removeClass('sync');
+  } else {
+    showSyncOn(navSync,relpath);
+  }
+
+  navSync.click(() => {
+    const navSync = $('#nav-sync');
+    if (navSync.hasClass('sync')) {
+      navSync.removeClass('sync');
+      showSyncOff(navSync,relpath);
+      storeLink(stripPath2(pathName())+hashUrl());
+    } else {
+      navSync.addClass('sync');
+      showSyncOn(navSync,relpath);
+      deleteLink();
+    }
+  });
+
+  navTo(o,toroot,hashUrl(),relpath);
+  showRoot();
+
+  $(window).bind('hashchange', () => {
+    if (!animationInProgress) {
+      if (window.location.hash && window.location.hash.length>1) {
+        let a;
+        if ($(location).attr('hash')) {
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-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
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-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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       </table>
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-          <td class="paramtype">pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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           <td>(</td>
-          <td class="paramtype">const pybind11::module &amp;&#160;</td>
-          <td class="paramname"><em>m</em></td><td>)</td>
+          <td class="paramtype">const pybind11::module &amp;</td>          <td class="paramname"><span class="paramname"><em>m</em></span></td><td>)</td>
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/partition_8h.html b/docs/html/partition_8h.html
index 2760dc2a..43e5e0e1 100644
--- a/docs/html/partition_8h.html
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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 </table>
 </div>
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-<!-- Generated by Doxygen 1.9.8 -->
+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
 <script type="text/javascript" src="menudata.js"></script>
 <script type="text/javascript" src="menu.js"></script>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
 $(function() {
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-  $(document).ready(function() { init_search(); });
+  initMenu('',true,false,'search.php','Search',true);
+  $(function() { init_search(); });
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 /* @license-end */
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@@ -66,7 +73,7 @@ $(function() {
 </div>
 <script type="text/javascript">
 /* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
-$(document).ready(function(){initNavTree('partition_8h.html',''); initResizable(); });
+$(function(){initNavTree('partition_8h.html',''); initResizable(true); });
 /* @license-end */
 </script>
 <div id="doc-content">
@@ -117,7 +124,7 @@ This graph shows which files directly or indirectly include this file:</div>
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-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
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diff --git a/docs/html/partition__abstract_8h.html b/docs/html/partition__abstract_8h.html
index c67c83e6..65c2bd90 100644
--- a/docs/html/partition__abstract_8h.html
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-<meta name="generator" content="Doxygen 1.9.8"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
 <meta name="viewport" content="width=device-width, initial-scale=1"/>
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
 <link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
 <script type="text/javascript" src="navtreedata.js"></script>
 <script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.1_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+<!-- Generated by Doxygen 1.13.2 -->
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 var searchBox = new SearchBox("searchBox", "search/",'.html');
 /* @license-end */
 </script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
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 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
 Functions</h2></td></tr>
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 <h2 class="groupheader">Function Documentation</h2>
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-<!-- Node44&#45;&gt;Node27 -->
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-<title>Node44&#45;&gt;Node27</title>
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-<!-- Node44&#45;&gt;Node42 -->
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-<title>Node44&#45;&gt;Node42</title>
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-<!-- Node48&#45;&gt;Node5 -->
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-<title>Node48&#45;&gt;Node5</title>
-<g id="a_edge84_Node000048_Node000005"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M899.56,-132.53C859.59,-112.81 795.55,-83.45 737.12,-66.5 711.26,-58.99 540.62,-33.14 464.12,-21.73"/>
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-<!-- Node48&#45;&gt;Node14 -->
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-<title>Node48&#45;&gt;Node14</title>
-<g id="a_edge81_Node000048_Node000014"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M930.87,-132.75C921.96,-113.33 906.06,-84.33 884.12,-66.5 861.58,-48.18 831.66,-36.08 805.9,-28.36"/>
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-<!-- Node48&#45;&gt;Node17 -->
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-<title>Node48&#45;&gt;Node17</title>
-<g id="a_edge83_Node000048_Node000017"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M990.1,-146.02C1061.88,-136.19 1196.78,-117.05 1311.12,-97 1378.99,-85.1 1395.05,-77.12 1463.12,-66.5 1605.41,-44.31 1646.63,-69.94 1785.12,-30.5 1786.12,-30.22 1787.12,-29.9 1788.13,-29.57"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="1789.35,-32.85 1797.29,-25.83 1786.71,-26.36 1789.35,-32.85"/>
+<!-- Node48&#45;&gt;Node16 -->
+<g id="edge66_Node000048_Node000016" class="edge">
+<title>Node48&#45;&gt;Node16</title>
+<g id="a_edge66_Node000048_Node000016"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M233.15,-132.75C243.44,-113.69 264.38,-80.94 293,-66.5 367.7,-28.81 950.7,-18.95 1131.03,-16.79"/>
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+<g id="edge67_Node000048_Node000027" class="edge">
 <title>Node48&#45;&gt;Node27</title>
-<g id="a_edge82_Node000048_Node000027"><a xlink:title=" ">
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+<g id="a_edge67_Node000048_Node000027"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M247.78,-132.61C263.12,-122.31 283.61,-108.54 299.18,-98.08"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="300.99,-101.09 307.33,-92.6 297.08,-95.28 300.99,-101.09"/>
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-<!-- Node48&#45;&gt;Node41 -->
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-<title>Node48&#45;&gt;Node41</title>
-<g id="a_edge80_Node000048_Node000041"><a xlink:title=" ">
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1025.09,-106.28 1031.93,-98.19 1021.53,-100.25 1025.09,-106.28"/>
+<!-- Node49&#45;&gt;Node5 -->
+<g id="edge70_Node000049_Node000005" class="edge">
+<title>Node49&#45;&gt;Node5</title>
+<g id="a_edge70_Node000049_Node000005"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M506.49,-135.72C563.83,-122.88 655.1,-102.44 705.86,-91.07"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="706.48,-94.51 715.48,-88.91 704.95,-87.68 706.48,-94.51"/>
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-<!-- Node48&#45;&gt;Node42 -->
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-<title>Node48&#45;&gt;Node42</title>
-<g id="a_edge79_Node000048_Node000042"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M888.14,-135.69C885.1,-134.76 882.08,-133.85 879.12,-133 832.74,-119.57 779.74,-106.47 739.67,-97.01"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="740.48,-93.61 729.94,-94.73 738.88,-100.42 740.48,-93.61"/>
+<!-- Node49&#45;&gt;Node27 -->
+<g id="edge69_Node000049_Node000027" class="edge">
+<title>Node49&#45;&gt;Node27</title>
+<g id="a_edge69_Node000049_Node000027"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M424.82,-132.61C402.66,-121.87 372.74,-107.36 350.89,-96.76"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="352.47,-93.63 341.94,-92.42 349.41,-99.93 352.47,-93.63"/>
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-<!-- Node50&#45;&gt;Node13 -->
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-<title>Node50&#45;&gt;Node13</title>
-<g id="a_edge88_Node000050_Node000013"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M885.93,-286.68C773.33,-275.1 513.56,-241.57 461.12,-174.75 421.08,-123.72 504.59,-59.81 548.48,-31.25"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="550.1,-34.37 556.66,-26.05 546.35,-28.46 550.1,-34.37"/>
+<!-- Node50&#45;&gt;Node5 -->
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+<title>Node50&#45;&gt;Node5</title>
+<g id="a_edge75_Node000050_Node000005"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M587.8,-204.65C610.14,-194.64 638.93,-180.21 662,-163.5 687.78,-144.83 713.04,-117.87 728.32,-100.33"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="730.9,-102.7 734.73,-92.82 725.58,-98.15 730.9,-102.7"/>
+</a>
+</g>
+</g>
+<!-- Node50&#45;&gt;Node14 -->
+<g id="edge73_Node000050_Node000014" class="edge">
+<title>Node50&#45;&gt;Node14</title>
+<g id="a_edge73_Node000050_Node000014"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M548.52,-204.89C543.54,-186.56 532.96,-154.77 515,-133 475.44,-85.02 411.21,-48.74 373.45,-30.14"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="375.43,-27.22 364.9,-26.03 372.4,-33.52 375.43,-27.22"/>
+</a>
+</g>
+</g>
+<!-- Node50&#45;&gt;Node15 -->
+<g id="edge76_Node000050_Node000015" class="edge">
+<title>Node50&#45;&gt;Node15</title>
+<g id="a_edge76_Node000050_Node000015"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M561.19,-205.07C582.5,-173.35 638.77,-97.46 708,-66.5 716.21,-62.83 1257.22,-29.41 1423.75,-19.2"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1423.81,-22.7 1433.57,-18.6 1423.38,-15.72 1423.81,-22.7"/>
+</a>
+</g>
+</g>
+<!-- Node50&#45;&gt;Node16 -->
+<g id="edge74_Node000050_Node000016" class="edge">
+<title>Node50&#45;&gt;Node16</title>
+<g id="a_edge74_Node000050_Node000016"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M554.95,-204.93C562.2,-173.61 584.02,-99.59 634,-66.5 674.89,-39.43 1001.66,-23.53 1131.29,-18.24"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1131.11,-21.75 1140.96,-17.85 1130.83,-14.76 1131.11,-21.75"/>
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+</g>
+</g>
+<!-- Node50&#45;&gt;Node49 -->
+<g id="edge72_Node000050_Node000049" class="edge">
+<title>Node50&#45;&gt;Node49</title>
+<g id="a_edge72_Node000050_Node000049"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M531.9,-204.85C518.12,-194.88 499.6,-181.49 484.19,-170.36"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="486.45,-167.67 476.3,-164.65 482.35,-173.34 486.45,-167.67"/>
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+<g id="edge82_Node000051_Node000005" class="edge">
 <title>Node51&#45;&gt;Node5</title>
-<g id="a_edge92_Node000051_Node000005"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M1005.77,-420.15C846.28,-405.96 370.12,-358.19 370.12,-293.5 370.12,-293.5 370.12,-293.5 370.12,-152.88 370.12,-107.67 397.03,-60.09 413.87,-34.74"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="416.72,-36.77 419.5,-26.55 410.95,-32.81 416.72,-36.77"/>
+<g id="a_edge82_Node000051_Node000005"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M300.02,-199.27C321.52,-178.99 357.65,-148.52 395,-133 501.4,-88.79 640.08,-82.46 705.6,-82.18"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="705.44,-85.68 715.45,-82.19 705.45,-78.68 705.44,-85.68"/>
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-<!-- Node51&#45;&gt;Node9 -->
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-<title>Node51&#45;&gt;Node9</title>
-<g id="a_edge90_Node000051_Node000009"><a xlink:title=" ">
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1060.63,-386.09 1057.13,-376.09 1053.63,-386.09 1060.63,-386.09"/>
+<!-- Node51&#45;&gt;Node14 -->
+<g id="edge79_Node000051_Node000014" class="edge">
+<title>Node51&#45;&gt;Node14</title>
+<g id="a_edge79_Node000051_Node000014"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M231.56,-210.83C204.38,-203.29 172.66,-189.28 156,-163.5 148.64,-152.11 153.75,-146.37 156,-133 161.18,-102.16 156.5,-88.22 179,-66.5 203.63,-42.73 239.21,-30.18 270.93,-23.56"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="271.32,-27.05 280.48,-21.74 270.01,-20.17 271.32,-27.05"/>
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-<!-- Node51&#45;&gt;Node17 -->
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-<title>Node51&#45;&gt;Node17</title>
-<g id="a_edge91_Node000051_Node000017"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M1108.7,-420.35C1268.12,-406.4 1748.06,-355.45 1844.12,-241.25 1894.76,-181.06 1848.75,-77.87 1826.07,-35.38"/>
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+<!-- Node51&#45;&gt;Node16 -->
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+<title>Node51&#45;&gt;Node16</title>
+<g id="a_edge81_Node000051_Node000016"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M231.38,-207.15C208.88,-198.8 184.25,-185.18 171,-163.5 134.65,-104.02 248.5,-68.6 254,-66.5 335.85,-35.25 945.66,-20.9 1130.83,-17.23"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1130.71,-20.73 1140.64,-17.04 1130.57,-13.73 1130.71,-20.73"/>
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-<!-- Node52&#45;&gt;Node5 -->
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-<title>Node52&#45;&gt;Node5</title>
-<g id="a_edge97_Node000052_Node000005"><a xlink:title=" ">
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+<!-- Node51&#45;&gt;Node27 -->
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+<title>Node51&#45;&gt;Node27</title>
+<g id="a_edge80_Node000051_Node000027"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M286.2,-199.22C294.19,-173.2 308.02,-128.22 315.95,-102.44"/>
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-<!-- Node52&#45;&gt;Node9 -->
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-<title>Node52&#45;&gt;Node9</title>
-<g id="a_edge94_Node000052_Node000009"><a xlink:title=" ">
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+<!-- Node51&#45;&gt;Node49 -->
+<g id="edge78_Node000051_Node000049" class="edge">
+<title>Node51&#45;&gt;Node49</title>
+<g id="a_edge78_Node000051_Node000049"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M328.28,-200.03C353.05,-190.1 383.1,-178.06 407.71,-168.2"/>
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-<!-- Node52&#45;&gt;Node11 -->
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-<title>Node52&#45;&gt;Node11</title>
-<g id="a_edge96_Node000052_Node000011"><a xlink:title=" ">
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+<!-- Node54&#45;&gt;Node5 -->
+<g id="edge90_Node000054_Node000005" class="edge">
+<title>Node54&#45;&gt;Node5</title>
+<g id="a_edge90_Node000054_Node000005"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M448.05,-199.22C519.9,-170.84 648.84,-119.93 709.6,-95.94"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="710.7,-99.27 718.71,-92.34 708.13,-92.76 710.7,-99.27"/>
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-<!-- Node52&#45;&gt;Node51 -->
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-<title>Node52&#45;&gt;Node51</title>
-<g id="a_edge95_Node000052_Node000051"><a xlink:title=" ">
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+<!-- Node54&#45;&gt;Node14 -->
+<g id="edge87_Node000054_Node000014" class="edge">
+<title>Node54&#45;&gt;Node14</title>
+<g id="a_edge87_Node000054_Node000014"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M346.05,-202.09C343,-201.18 339.96,-200.31 337,-199.5 264.18,-179.6 218.39,-222.27 171,-163.5 124.23,-105.5 241,-52.67 304.78,-29.14"/>
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-<!-- Node53&#45;&gt;Node9 -->
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-<title>Node53&#45;&gt;Node9</title>
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+<!-- Node54&#45;&gt;Node17 -->
+<g id="edge89_Node000054_Node000017" class="edge">
+<title>Node54&#45;&gt;Node17</title>
+<g id="a_edge89_Node000054_Node000017"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M448.17,-207.8C463.2,-204.73 479.7,-201.67 495,-199.5 690.15,-171.86 745.06,-208.28 937,-163.5 972.85,-155.14 978.43,-142.46 1014,-133 1310.57,-54.17 1682.96,-25.41 1794.79,-18.21"/>
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-<!-- Node53&#45;&gt;Node10 -->
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-<title>Node53&#45;&gt;Node10</title>
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+<!-- Node54&#45;&gt;Node27 -->
+<g id="edge88_Node000054_Node000027" class="edge">
+<title>Node54&#45;&gt;Node27</title>
+<g id="a_edge88_Node000054_Node000027"><a xlink:title=" ">
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-<!-- Node53&#45;&gt;Node11 -->
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-<title>Node53&#45;&gt;Node11</title>
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-<title>Node52&#45;&gt;Node51</title>
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+<!-- Node54&#45;&gt;Node14 -->
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+<title>Node54&#45;&gt;Node14</title>
+<g id="a_edge87_Node000054_Node000014"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M346.05,-202.09C343,-201.18 339.96,-200.31 337,-199.5 264.18,-179.6 218.39,-222.27 171,-163.5 124.23,-105.5 241,-52.67 304.78,-29.14"/>
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-<title>Node53&#45;&gt;Node9</title>
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+<!-- Node54&#45;&gt;Node17 -->
+<g id="edge89_Node000054_Node000017" class="edge">
+<title>Node54&#45;&gt;Node17</title>
+<g id="a_edge89_Node000054_Node000017"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M448.17,-207.8C463.2,-204.73 479.7,-201.67 495,-199.5 690.15,-171.86 745.06,-208.28 937,-163.5 972.85,-155.14 978.43,-142.46 1014,-133 1310.57,-54.17 1682.96,-25.41 1794.79,-18.21"/>
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-<!-- Node53&#45;&gt;Node10 -->
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-<title>Node53&#45;&gt;Node10</title>
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+<!-- Node54&#45;&gt;Node27 -->
+<g id="edge88_Node000054_Node000027" class="edge">
+<title>Node54&#45;&gt;Node27</title>
+<g id="a_edge88_Node000054_Node000027"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M385.93,-199.22C371.52,-172.96 346.52,-127.41 332.43,-101.74"/>
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-<title>Node53&#45;&gt;Node11</title>
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+<!-- Node54&#45;&gt;Node48 -->
+<g id="edge86_Node000054_Node000048" class="edge">
+<title>Node54&#45;&gt;Node48</title>
+<g id="a_edge86_Node000054_Node000048"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M347.54,-199.09C323.87,-189.38 295.68,-177.83 272.42,-168.29"/>
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-<title>Node53&#45;&gt;Node17</title>
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1835.67,-30.6 1826.05,-26.15 1830.79,-35.62 1835.67,-30.6"/>
+<!-- Node54&#45;&gt;Node49 -->
+<g id="edge85_Node000054_Node000049" class="edge">
+<title>Node54&#45;&gt;Node49</title>
+<g id="a_edge85_Node000054_Node000049"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M413.78,-199.09C420.66,-190.77 428.66,-181.1 435.77,-172.5"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="438.41,-174.8 442.08,-164.87 433.01,-170.34 438.41,-174.8"/>
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-<!-- Node53&#45;&gt;Node20 -->
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-<title>Node53&#45;&gt;Node20</title>
-<g id="a_edge104_Node000053_Node000020"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M1288.05,-544.53C1474.19,-537.69 2097.12,-508.66 2097.12,-426.5 2097.12,-426.5 2097.12,-426.5 2097.12,-152.88 2097.12,-113.57 2097.62,-100.63 2078.12,-66.5 2072.08,-55.91 2063.05,-46.24 2054.11,-38.28"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="2056.37,-35.61 2046.46,-31.88 2051.88,-40.98 2056.37,-35.61"/>
+<!-- Node55&#45;&gt;Node20 -->
+<g id="edge93_Node000055_Node000020" class="edge">
+<title>Node55&#45;&gt;Node20</title>
+<g id="a_edge93_Node000055_Node000020"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1454.35,-347.13C1522.56,-340.15 1642.97,-326.45 1745,-307.75 2008.21,-259.5 2168.87,-324.97 2309,-97 2320.58,-78.16 2307.18,-55.5 2292.85,-38.99"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2295.8,-37.03 2286.43,-32.08 2290.67,-41.79 2295.8,-37.03"/>
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-<!-- Node53&#45;&gt;Node21 -->
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-<title>Node53&#45;&gt;Node21</title>
-<g id="a_edge102_Node000053_Node000021"><a xlink:title=" ">
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+<!-- Node55&#45;&gt;Node21 -->
+<g id="edge92_Node000055_Node000021" class="edge">
+<title>Node55&#45;&gt;Node21</title>
+<g id="a_edge92_Node000055_Node000021"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1443.44,-343.3C1489.6,-333.67 1563.11,-318.32 1616.34,-307.21"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1616.82,-310.68 1625.9,-305.21 1615.39,-303.83 1616.82,-310.68"/>
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-<!-- Node53&#45;&gt;Node48 -->
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-<title>Node53&#45;&gt;Node48</title>
-<g id="a_edge106_Node000053_Node000048"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M1184.4,-543.27C1103.74,-537.81 952.51,-524.09 907.12,-496 874.99,-476.11 858.12,-464.29 858.12,-426.5 858.12,-426.5 858.12,-426.5 858.12,-291.5 858.12,-249.38 886.96,-208.89 910.22,-183.07"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="912.55,-185.71 916.81,-176.01 907.43,-180.93 912.55,-185.71"/>
+<!-- Node55&#45;&gt;Node27 -->
+<g id="edge95_Node000055_Node000027" class="edge">
+<title>Node55&#45;&gt;Node27</title>
+<g id="a_edge95_Node000055_Node000027"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1345.61,-351.67C1167.81,-349.09 604.9,-338.63 426,-307.75 326.18,-290.52 284.73,-307.38 208,-241.25 169.49,-208.06 141.26,-174.24 171,-133 198.15,-95.35 254.7,-85.48 290.37,-83.13"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="290.26,-86.64 300.08,-82.67 289.92,-79.65 290.26,-86.64"/>
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-<!-- Node53&#45;&gt;Node49 -->
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-<title>Node53&#45;&gt;Node49</title>
-<g id="a_edge100_Node000053_Node000049"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M1232.58,-531.57C1222.2,-488.54 1191.82,-362.66 1179.95,-313.5"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="1183.4,-312.88 1177.65,-303.98 1176.6,-314.52 1183.4,-312.88"/>
+<!-- Node55&#45;&gt;Node34 -->
+<g id="edge96_Node000055_Node000034" class="edge">
+<title>Node55&#45;&gt;Node34</title>
+<g id="a_edge96_Node000055_Node000034"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1394.65,-343.27C1384.14,-324.8 1361.12,-281.28 1353,-241.25 1349.31,-223.06 1347.1,-217.09 1353,-199.5 1357.13,-187.19 1365.61,-175.48 1373.51,-166.48"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1375.99,-168.94 1380.29,-159.25 1370.89,-164.15 1375.99,-168.94"/>
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-<!-- Node53&#45;&gt;Node52 -->
-<g id="edge107_Node000053_Node000052" class="edge">
-<title>Node53&#45;&gt;Node52</title>
-<g id="a_edge107_Node000053_Node000052"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M1184.16,-534.62C1137.97,-524.28 1070.81,-509.24 1024.73,-498.93"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="1025.78,-495.58 1015.26,-496.81 1024.25,-502.41 1025.78,-495.58"/>
+<!-- Node55&#45;&gt;Node39 -->
+<g id="edge94_Node000055_Node000039" class="edge">
+<title>Node55&#45;&gt;Node39</title>
+<g id="a_edge94_Node000055_Node000039"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1369.45,-343.31C1345.04,-335.48 1310.34,-323.04 1282,-307.75 1247.84,-289.32 1212.28,-262.31 1189.03,-243.42"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1191.27,-240.73 1181.33,-237.08 1186.82,-246.13 1191.27,-240.73"/>
+</a>
+</g>
+</g>
+<!-- Node57&#45;&gt;Node13 -->
+<g id="edge100_Node000057_Node000013" class="edge">
+<title>Node57&#45;&gt;Node13</title>
+<g id="a_edge100_Node000057_Node000013"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2255.23,-277.2C2248.81,-247.31 2230.46,-177.38 2192,-133 2147.74,-81.92 2075.39,-47.06 2032.07,-29.5"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2033.45,-26.28 2022.87,-25.86 2030.88,-32.79 2033.45,-26.28"/>
+</a>
+</g>
+</g>
+<!-- Node58&#45;&gt;Node5 -->
+<g id="edge105_Node000058_Node000005" class="edge">
+<title>Node58&#45;&gt;Node5</title>
+<g id="a_edge105_Node000058_Node000005"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1604.63,-477.97C1415.1,-470.72 766,-439.66 766,-354.38 766,-354.38 766,-354.38 766,-291.5 766,-234.05 753.78,-220.66 748,-163.5 745.93,-142.99 744.59,-119.46 743.82,-103.11"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="747.32,-103.08 743.39,-93.24 740.33,-103.39 747.32,-103.08"/>
+</a>
+</g>
+</g>
+<!-- Node58&#45;&gt;Node9 -->
+<g id="edge103_Node000058_Node000009" class="edge">
+<title>Node58&#45;&gt;Node9</title>
+<g id="a_edge103_Node000058_Node000009"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1696.84,-465.11C1722.76,-455.83 1756.52,-443.73 1784.29,-433.78"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1785.35,-437.12 1793.58,-430.45 1782.99,-430.53 1785.35,-437.12"/>
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+</g>
+</g>
+<!-- Node58&#45;&gt;Node17 -->
+<g id="edge104_Node000058_Node000017" class="edge">
+<title>Node58&#45;&gt;Node17</title>
+<g id="a_edge104_Node000058_Node000017"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1674.05,-465.08C1722.77,-423.9 1854.97,-301.16 1879,-163.5 1881.33,-150.15 1883.29,-145.86 1879,-133 1872.68,-114.03 1860.99,-114.87 1852,-97 1842.15,-77.43 1835.61,-53.11 1831.88,-36.3"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1835.32,-35.68 1829.87,-26.6 1828.47,-37.1 1835.32,-35.68"/>
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+</g>
+</g>
+<!-- Node59&#45;&gt;Node5 -->
+<g id="edge110_Node000059_Node000005" class="edge">
+<title>Node59&#45;&gt;Node5</title>
+<g id="a_edge110_Node000059_Node000005"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1814.07,-531.74C1795.93,-515.98 1755.65,-483.15 1716,-465.5 1533.35,-384.19 1467.78,-425.88 1278,-363 1066.85,-293.04 1000.96,-291.45 819,-163.5 793.74,-145.74 770.29,-118.53 756.31,-100.69"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="759.16,-98.66 750.31,-92.84 753.6,-102.91 759.16,-98.66"/>
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+</g>
+</g>
+<!-- Node59&#45;&gt;Node9 -->
+<g id="edge107_Node000059_Node000009" class="edge">
+<title>Node59&#45;&gt;Node9</title>
+<g id="a_edge107_Node000059_Node000009"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1824.86,-531.61C1826.65,-512.92 1830.82,-469.38 1833.52,-441.18"/>
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+</g>
+</g>
+<!-- Node59&#45;&gt;Node11 -->
+<g id="edge109_Node000059_Node000011" class="edge">
+<title>Node59&#45;&gt;Node11</title>
+<g id="a_edge109_Node000059_Node000011"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1881.23,-533.16C1972.29,-517.71 2140,-473.14 2140,-354.38 2140,-354.38 2140,-354.38 2140,-291.5 2140,-221.04 2178.15,-190.19 2137,-133 2121.66,-111.68 2096.47,-99.37 2071.58,-92.27"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2072.61,-88.92 2062.05,-89.82 2070.87,-95.7 2072.61,-88.92"/>
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+</g>
+</g>
+<!-- Node59&#45;&gt;Node58 -->
+<g id="edge108_Node000059_Node000058" class="edge">
+<title>Node59&#45;&gt;Node58</title>
+<g id="a_edge108_Node000059_Node000058"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1798.12,-531.55C1774.35,-523.22 1738.39,-510.62 1708.6,-500.18"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1709.95,-496.95 1699.36,-496.95 1707.64,-503.56 1709.95,-496.95"/>
+</a>
+</g>
+</g>
+<!-- Node60&#45;&gt;Node9 -->
+<g id="edge114_Node000060_Node000009" class="edge">
+<title>Node60&#45;&gt;Node9</title>
+<g id="a_edge114_Node000060_Node000009"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2081.13,-586.89C2034.22,-554.04 1920.32,-474.29 1865.91,-436.19"/>
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+</g>
+</g>
+<!-- Node60&#45;&gt;Node10 -->
+<g id="edge118_Node000060_Node000010" class="edge">
+<title>Node60&#45;&gt;Node10</title>
+<g id="a_edge118_Node000060_Node000010"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2153.85,-597.53C2265.36,-587.57 2518,-556.72 2518,-481.75 2518,-481.75 2518,-481.75 2518,-147.25 2518,-96.08 2468.84,-53.09 2438.44,-31.4"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2440.79,-28.76 2430.57,-25.98 2436.82,-34.53 2440.79,-28.76"/>
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+</g>
+</g>
+<!-- Node60&#45;&gt;Node11 -->
+<g id="edge116_Node000060_Node000011" class="edge">
+<title>Node60&#45;&gt;Node11</title>
+<g id="a_edge116_Node000060_Node000011"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2153.86,-601.12C2233.29,-597.51 2376,-577.66 2376,-481.75 2376,-481.75 2376,-481.75 2376,-352.38 2376,-194.72 2155.75,-120.84 2050.61,-94.55"/>
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+</g>
+</g>
+<!-- Node60&#45;&gt;Node17 -->
+<g id="edge112_Node000060_Node000017" class="edge">
+<title>Node60&#45;&gt;Node17</title>
+<g id="a_edge112_Node000060_Node000017"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2119.25,-586.78C2141.67,-565.89 2178,-525.33 2178,-481.75 2178,-481.75 2178,-481.75 2178,-291.5 2178,-251.96 1907.87,-125.04 1880,-97 1861.78,-78.66 1846.55,-52.92 1837.38,-35.47"/>
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+</g>
+</g>
+<!-- Node60&#45;&gt;Node20 -->
+<g id="edge117_Node000060_Node000020" class="edge">
+<title>Node60&#45;&gt;Node20</title>
+<g id="a_edge117_Node000060_Node000020"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2153.81,-599.66C2208.6,-595.91 2296.31,-584.67 2364,-551.25 2405.63,-530.69 2442,-528.18 2442,-481.75 2442,-481.75 2442,-481.75 2442,-147.25 2442,-89.69 2380.38,-54.17 2330.69,-34.89"/>
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+</g>
+</g>
+<!-- Node60&#45;&gt;Node21 -->
+<g id="edge115_Node000060_Node000021" class="edge">
+<title>Node60&#45;&gt;Node21</title>
+<g id="a_edge115_Node000060_Node000021"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2102,-586.75C2102,-564.15 2102,-519.59 2102,-481.75 2102,-481.75 2102,-481.75 2102,-413.25 2102,-381.23 2107.19,-364.73 2083,-343.75 2034.19,-301.43 1848.1,-293.99 1747.49,-293.15"/>
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+</g>
+</g>
+<!-- Node60&#45;&gt;Node56 -->
+<g id="edge113_Node000060_Node000056" class="edge">
+<title>Node60&#45;&gt;Node56</title>
+<g id="a_edge113_Node000060_Node000056"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2097.47,-587.11C2094.46,-577.12 2090.59,-563.48 2088,-551.25 2074.47,-487.44 2065.12,-410.66 2061.15,-374.75"/>
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+</g>
+</g>
+<!-- Node60&#45;&gt;Node59 -->
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+<title>Node43&#45;&gt;Node21</title>
+<g id="a_edge67_Node000043_Node000021"><a xlink:title=" ">
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+<!-- Node44&#45;&gt;Node43 -->
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+<path fill="none" stroke="#63b8ff" d="M678.83,-219.27C728.35,-211.61 806.56,-196.43 826,-174.75 841.97,-156.94 844.15,-128.94 843.15,-108.51"/>
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+</g>
+<!-- Node43 -->
+<g id="Node000043" class="node">
+<title>Node43</title>
+<g id="a_Node000043"><a xlink:href="partition__abstract_8h.html" target="_top" xlink:title=" ">
+<polygon fill="white" stroke="#666666" points="510.12,-97 407.88,-97 407.88,-66.5 510.12,-66.5 510.12,-97"/>
+<text xml:space="preserve" text-anchor="start" x="415.88" y="-83.5" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire/partition</text>
+<text xml:space="preserve" text-anchor="middle" x="459" y="-72.25" font-family="Helvetica,sans-Serif" font-size="10.00">/partition_abstract.h</text>
+</a>
+</g>
+</g>
+<!-- Node41&#45;&gt;Node43 -->
+<g id="edge66_Node000041_Node000043" class="edge">
+<title>Node41&#45;&gt;Node43</title>
+<g id="a_edge66_Node000041_Node000043"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M595.3,-224.51C519.83,-222.63 365.29,-213.98 332,-174.75 319.99,-160.6 321.57,-148.35 332,-133 346.68,-111.4 372.24,-99.09 396.59,-92.07"/>
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+</a>
+</g>
+</g>
+<!-- Node44 -->
+<g id="Node000044" class="node">
+<title>Node44</title>
+<g id="a_Node000044"><a xlink:href="partition__ground_8h.html" target="_top" xlink:title=" ">
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+<text xml:space="preserve" text-anchor="middle" x="511" y="-144.38" font-family="Helvetica,sans-Serif" font-size="10.00">/partition_ground.h</text>
+</a>
+</g>
+</g>
+<!-- Node41&#45;&gt;Node44 -->
+<g id="edge69_Node000041_Node000044" class="edge">
+<title>Node41&#45;&gt;Node44</title>
+<g id="a_edge69_Node000041_Node000044"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M610.59,-210.3C592.19,-200.06 567.42,-186.28 547.19,-175.02"/>
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+</a>
+</g>
+</g>
+<!-- Node45 -->
+<g id="Node000045" class="node">
+<title>Node45</title>
+<g id="a_Node000045"><a xlink:href="partition__rauscher__thielemann_8h.html" target="_top" xlink:title=" ">
+<polygon fill="#fff0f0" stroke="red" points="437.12,-174.75 340.88,-174.75 340.88,-133 437.12,-133 437.12,-174.75"/>
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+<text xml:space="preserve" text-anchor="start" x="348.88" y="-150" font-family="Helvetica,sans-Serif" font-size="10.00">/partition_rauscher</text>
+<text xml:space="preserve" text-anchor="middle" x="389" y="-138.75" font-family="Helvetica,sans-Serif" font-size="10.00">_thielemann.h</text>
+</a>
+</g>
+</g>
+<!-- Node41&#45;&gt;Node45 -->
+<g id="edge75_Node000041_Node000045" class="edge">
+<title>Node41&#45;&gt;Node45</title>
+<g id="a_edge75_Node000041_Node000045"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M595.48,-213.96C558.32,-204 502.41,-188.8 454,-174.75 452.17,-174.22 450.31,-173.68 448.43,-173.12"/>
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+</g>
+<!-- Node47 -->
+<g id="Node000047" class="node">
+<title>Node47</title>
+<g id="a_Node000047"><a xlink:href="rauscher__thielemann__partition__data__record_8h.html" target="_top" xlink:title=" ">
+<polygon fill="#fff0f0" stroke="red" points="697.12,-174.75 576.88,-174.75 576.88,-133 697.12,-133 697.12,-174.75"/>
+<text xml:space="preserve" text-anchor="start" x="584.88" y="-161.25" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire/partition</text>
+<text xml:space="preserve" text-anchor="start" x="584.88" y="-150" font-family="Helvetica,sans-Serif" font-size="10.00">/rauscher_thielemann</text>
+<text xml:space="preserve" text-anchor="middle" x="637" y="-138.75" font-family="Helvetica,sans-Serif" font-size="10.00">_partition_data_record.h</text>
+</a>
+</g>
+</g>
+<!-- Node41&#45;&gt;Node47 -->
+<g id="edge81_Node000041_Node000047" class="edge">
+<title>Node41&#45;&gt;Node47</title>
+<g id="a_edge81_Node000041_Node000047"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M637,-210.47C637,-203.54 637,-194.97 637,-186.64"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="640.5,-186.75 637,-176.75 633.5,-186.75 640.5,-186.75"/>
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+</g>
+</g>
+<!-- Node48 -->
+<g id="Node000048" class="node">
+<title>Node48</title>
+<g id="a_Node000048"><a xlink:href="partition__composite_8h.html" target="_top" xlink:title=" ">
+<polygon fill="white" stroke="#666666" points="816.75,-174.75 715.25,-174.75 715.25,-133 816.75,-133 816.75,-174.75"/>
+<text xml:space="preserve" text-anchor="start" x="723.25" y="-161.25" font-family="Helvetica,sans-Serif" font-size="10.00">gridfire/partition</text>
+<text xml:space="preserve" text-anchor="start" x="723.25" y="-150" font-family="Helvetica,sans-Serif" font-size="10.00">/composite/partition</text>
+<text xml:space="preserve" text-anchor="middle" x="766" y="-138.75" font-family="Helvetica,sans-Serif" font-size="10.00">_composite.h</text>
+</a>
+</g>
+</g>
+<!-- Node41&#45;&gt;Node48 -->
+<g id="edge82_Node000041_Node000048" class="edge">
+<title>Node41&#45;&gt;Node48</title>
+<g id="a_edge82_Node000041_Node000048"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M664.04,-210.3C679.88,-201.69 700.32,-190.58 718.74,-180.57"/>
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+</a>
+</g>
+</g>
+<!-- Node42&#45;&gt;Node9 -->
+<g id="edge64_Node000042_Node000009" class="edge">
+<title>Node42&#45;&gt;Node9</title>
+<g id="a_edge64_Node000042_Node000009"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M885.97,-72.91C956.53,-60.87 1091.12,-37.9 1165.44,-25.22"/>
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 <!-- Node42&#45;&gt;Node21 -->
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+<g id="edge65_Node000042_Node000021" class="edge">
 <title>Node42&#45;&gt;Node21</title>
-<g id="a_edge75_Node000042_Node000021"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M480.46,-132.68C478.85,-113.22 473.42,-84.18 456,-66.5 417.51,-27.45 388.99,-50.66 338,-30.5 337.52,-30.31 337.03,-30.11 336.54,-29.91"/>
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+<g id="a_edge65_Node000042_Node000021"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M856.79,-66.11C868.23,-56.14 883.39,-42.93 895.23,-32.61"/>
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-<title>Node42&#45;&gt;Node35</title>
-<g id="a_edge73_Node000042_Node000035"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M524.1,-132.59C544.35,-123.06 568.39,-111.74 588.45,-102.31"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="589.9,-105.49 597.46,-98.06 586.92,-99.16 589.9,-105.49"/>
+<!-- Node43&#45;&gt;Node18 -->
+<g id="edge68_Node000043_Node000018" class="edge">
+<title>Node43&#45;&gt;Node18</title>
+<g id="a_edge68_Node000043_Node000018"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M415.21,-66.11C381.28,-54.78 334.82,-39.25 302.8,-28.55"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="304.15,-25.31 293.56,-25.46 301.93,-31.95 304.15,-25.31"/>
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-<title>Node42&#45;&gt;Node36</title>
-<g id="a_edge72_Node000042_Node000036"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M446.87,-132.59C431.35,-123.37 413.01,-112.47 397.45,-103.22"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="399.37,-100.29 388.99,-98.19 395.79,-106.31 399.37,-100.29"/>
+<!-- Node43&#45;&gt;Node21 -->
+<g id="edge67_Node000043_Node000021" class="edge">
+<title>Node43&#45;&gt;Node21</title>
+<g id="a_edge67_Node000043_Node000021"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M510.31,-73.48C605.17,-60.03 805.34,-31.65 882.63,-20.7"/>
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-<g id="a_edge81_Node000044_Node000006"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M810.23,-277.18C813.8,-245.32 827.19,-168.61 875,-133 936.82,-86.96 1146.91,-121.48 1220,-97 1264.11,-82.23 1309.17,-51.08 1334.17,-32.08"/>
-<polygon fill="#63b8ff" stroke="#63b8ff" points="1336.07,-35.04 1341.82,-26.15 1331.78,-29.51 1336.07,-35.04"/>
+<!-- Node44&#45;&gt;Node7 -->
+<g id="edge71_Node000044_Node000007" class="edge">
+<title>Node44&#45;&gt;Node7</title>
+<g id="a_edge71_Node000044_Node000007"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M524.06,-138.25C546.71,-112.88 593.2,-60.82 617.47,-33.64"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="620,-36.07 624.05,-26.28 614.77,-31.41 620,-36.07"/>
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-<!-- Node45&#45;&gt;Node2 -->
-<g id="edge83_Node000045_Node000002" class="edge">
-<title>Node45&#45;&gt;Node2</title>
-<g id="a_edge83_Node000045_Node000002"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M970.15,-409.86C947.7,-400.7 918.55,-388.8 894.36,-378.93"/>
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+<!-- Node44&#45;&gt;Node8 -->
+<g id="edge74_Node000044_Node000008" class="edge">
+<title>Node44&#45;&gt;Node8</title>
+<g id="a_edge74_Node000044_Node000008"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M549.29,-138.21C555.48,-136.22 561.87,-134.39 568,-133 710.17,-100.8 752.61,-132.47 894,-97 929.3,-88.14 934.52,-74.6 970,-66.5 1103.35,-36.04 1523.47,-21.63 1666.09,-17.53"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1666.03,-21.03 1675.93,-17.25 1665.84,-14.03 1666.03,-21.03"/>
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-<!-- Node45&#45;&gt;Node10 -->
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-<title>Node45&#45;&gt;Node10</title>
-<g id="a_edge84_Node000045_Node000010"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M1057.59,-422.8C1170.67,-417.48 1447.06,-395.74 1658,-307.75 1806.38,-245.85 1853.34,-223.94 1952,-97 1966.13,-78.81 1975.12,-53.74 1980.09,-36.37"/>
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+<!-- Node44&#45;&gt;Node9 -->
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+<title>Node44&#45;&gt;Node9</title>
+<g id="a_edge72_Node000044_Node000009"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M548.93,-138.28C601.24,-118.77 698.84,-84.55 785,-66.5 920.34,-38.16 1083.05,-24.67 1165.13,-19.28"/>
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+</g>
+</g>
+<!-- Node44&#45;&gt;Node18 -->
+<g id="edge73_Node000044_Node000018" class="edge">
+<title>Node44&#45;&gt;Node18</title>
+<g id="a_edge73_Node000044_Node000018"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M518.05,-138.2C525.96,-119.38 535.63,-86.75 519,-66.5 492.12,-33.75 366.75,-21.96 303.18,-18.04"/>
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+</g>
+</g>
+<!-- Node44&#45;&gt;Node43 -->
+<g id="edge70_Node000044_Node000043" class="edge">
+<title>Node44&#45;&gt;Node43</title>
+<g id="a_edge70_Node000044_Node000043"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M500.23,-138.35C493.39,-129.13 484.39,-117 476.55,-106.41"/>
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+</g>
+<!-- Node45&#45;&gt;Node7 -->
+<g id="edge77_Node000045_Node000007" class="edge">
+<title>Node45&#45;&gt;Node7</title>
+<g id="a_edge77_Node000045_Node000007"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M374.36,-132.53C362.62,-113.49 350.45,-85.25 366,-66.5 390.28,-37.22 489.93,-24.89 560.35,-19.77"/>
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+</g>
+<!-- Node45&#45;&gt;Node9 -->
+<g id="edge79_Node000045_Node000009" class="edge">
+<title>Node45&#45;&gt;Node9</title>
+<g id="a_edge79_Node000045_Node000009"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M437.41,-134.42C492.25,-114.31 584.71,-82.85 667,-66.5 761.48,-47.73 1046.14,-27.53 1164.98,-19.66"/>
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 <!-- Node45&#45;&gt;Node18 -->
-<g id="edge85_Node000045_Node000018" class="edge">
+<g id="edge80_Node000045_Node000018" class="edge">
 <title>Node45&#45;&gt;Node18</title>
-<g id="a_edge85_Node000045_Node000018"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M954.64,-425.07C754.52,-425.95 38,-415.88 38,-227 38,-227 38,-227 38,-152.88 38,-98 92.88,-53.5 126.49,-31.4"/>
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+<title>Node45&#45;&gt;Node21</title>
+<g id="a_edge78_Node000045_Node000021"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M384.89,-132.69C382.17,-112.93 381.77,-83.42 399,-66.5 416.36,-49.45 773.11,-25.27 882.44,-18.24"/>
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+<title>Node45&#45;&gt;Node43</title>
+<g id="a_edge76_Node000045_Node000043"><a xlink:title=" ">
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+<!-- Node48&#45;&gt;Node7 -->
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+<title>Node48&#45;&gt;Node7</title>
+<g id="a_edge85_Node000048_Node000007"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M746.38,-132.72C720.13,-105.76 674.07,-58.44 649.52,-33.22"/>
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-<g id="a_edge88_Node000046_Node000045"><a xlink:title=" ">
-<path fill="none" stroke="#63b8ff" d="M936.45,-476.43C947.08,-468.8 962.8,-457.52 976.6,-447.61"/>
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+<!-- Node48&#45;&gt;Node10 -->
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diff --git a/docs/html/policy__abstract_8h.html b/docs/html/policy__abstract_8h.html
index 99f82d71..10d0ee91 100644
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+</g>
+<!-- Node35&#45;&gt;Node36 -->
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+<title>Node35&#45;&gt;Node36</title>
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diff --git a/docs/html/policy__logical_8h.js b/docs/html/policy__logical_8h.js
index e03e0819..6be4ddee 100644
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+    [ "gridfire::policy::MultiReactionChainPolicy", "classgridfire_1_1policy_1_1_multi_reaction_chain_policy.html", "classgridfire_1_1policy_1_1_multi_reaction_chain_policy" ]
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\ No newline at end of file
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+<!-- Node25&#45;&gt;Node8 -->
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+<title>Node25&#45;&gt;Node8</title>
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+<!-- Node42&#45;&gt;Node6 -->
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+<title>Node42&#45;&gt;Node6</title>
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+<title>Node42&#45;&gt;Node8</title>
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+<!-- Node42&#45;&gt;Node11 -->
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+<title>Node42&#45;&gt;Node11</title>
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+<!-- Node42&#45;&gt;Node12 -->
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+<title>Node42&#45;&gt;Node12</title>
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+<!-- Node23&#45;&gt;Node22 -->
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+<title>Node23&#45;&gt;Node22</title>
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+<!-- Node24 -->
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+<!-- Node23&#45;&gt;Node24 -->
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+<title>Node23&#45;&gt;Node24</title>
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+<!-- Node25&#45;&gt;Node8 -->
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+<title>Node25&#45;&gt;Node8</title>
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+<!-- Node25&#45;&gt;Node19 -->
+<g id="edge43_Node000025_Node000019" class="edge">
+<title>Node25&#45;&gt;Node19</title>
+<g id="a_edge43_Node000025_Node000019"><a xlink:title=" ">
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+<!-- Node25&#45;&gt;Node26 -->
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+<title>Node25&#45;&gt;Node26</title>
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-<polygon fill="#63b8ff" stroke="#63b8ff" points="1127.03,-34.3 1133.69,-26.06 1123.34,-28.35 1127.03,-34.3"/>
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+<g id="edge41_Node000025_Node000027" class="edge">
+<title>Node25&#45;&gt;Node27</title>
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+<!-- Node29&#45;&gt;Node7 -->
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+<title>Node29&#45;&gt;Node7</title>
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+<!-- Node29&#45;&gt;Node30 -->
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+<!-- Node31 -->
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+<!-- Node29&#45;&gt;Node31 -->
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+<!-- Node29&#45;&gt;Node32 -->
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+<path fill="none" stroke="#63b8ff" d="M1022.11,-260.23C957.01,-247.17 848.34,-216.87 779.62,-152.25 763.6,-137.18 754.23,-113.31 749.29,-96.53"/>
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+</a>
+</g>
+</g>
+<!-- Node44 -->
+<g id="Node000044" class="node">
+<title>Node44</title>
+<g id="a_Node000044"><a xlink:title=" ">
+<polygon fill="#e0e0e0" stroke="#999999" points="1138.25,-213.12 1099,-213.12 1099,-193.88 1138.25,-193.88 1138.25,-213.12"/>
+<text xml:space="preserve" text-anchor="middle" x="1118.62" y="-199.62" font-family="Helvetica,sans-Serif" font-size="10.00">utility</text>
+</a>
+</g>
+</g>
+<!-- Node18&#45;&gt;Node44 -->
+<g id="edge49_Node000018_Node000044" class="edge">
+<title>Node18&#45;&gt;Node44</title>
+<g id="a_edge49_Node000018_Node000044"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1086.16,-254.36C1092.26,-244.98 1100.24,-232.74 1106.75,-222.73"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1109.53,-224.88 1112.05,-214.59 1103.66,-221.06 1109.53,-224.88"/>
+</a>
+</g>
+</g>
+<!-- Node19&#45;&gt;Node16 -->
+<g id="edge22_Node000019_Node000016" class="edge">
+<title>Node19&#45;&gt;Node16</title>
+<g id="a_edge22_Node000019_Node000016"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2330.74,-66.05C2297.7,-56.03 2244.29,-39.82 2207.42,-28.63"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2208.58,-25.32 2197.99,-25.77 2206.55,-32.02 2208.58,-25.32"/>
+</a>
+</g>
+</g>
+<!-- Node19&#45;&gt;Node17 -->
+<g id="edge21_Node000019_Node000017" class="edge">
+<title>Node19&#45;&gt;Node17</title>
+<g id="a_edge21_Node000019_Node000017"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2373.08,-66.18C2383.71,-58.55 2399.42,-47.27 2413.22,-37.36"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2415.07,-40.34 2421.16,-31.66 2410.99,-34.65 2415.07,-40.34"/>
+</a>
+</g>
+</g>
+<!-- Node20&#45;&gt;Node7 -->
+<g id="edge25_Node000020_Node000007" class="edge">
+<title>Node20&#45;&gt;Node7</title>
+<g id="a_edge25_Node000020_Node000007"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1632.4,-127.46C1617.27,-125.35 1600.84,-123.26 1585.62,-121.75 1313.6,-94.82 1243.93,-109.69 971.62,-85.75 898.52,-79.32 880.53,-74.89 807.62,-66.5 665.88,-50.18 629.94,-50.17 488.62,-30.5 481.36,-29.49 473.76,-28.35 466.22,-27.17"/>
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+</a>
+</g>
+</g>
+<!-- Node20&#45;&gt;Node8 -->
+<g id="edge24_Node000020_Node000008" class="edge">
+<title>Node20&#45;&gt;Node8</title>
+<g id="a_edge24_Node000020_Node000008"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1632.37,-123.95C1627.73,-123.13 1623.11,-122.38 1618.62,-121.75 1441.08,-96.62 1230.48,-84.79 1120.35,-79.97"/>
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+</g>
+</g>
+<!-- Node20&#45;&gt;Node14 -->
+<g id="edge27_Node000020_Node000014" class="edge">
+<title>Node20&#45;&gt;Node14</title>
+<g id="a_edge27_Node000020_Node000014"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1655.38,-121.32C1604.11,-97.97 1504.74,-52.73 1454.8,-29.99"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1456.29,-26.82 1445.74,-25.87 1453.39,-33.19 1456.29,-26.82"/>
+</a>
+</g>
+</g>
+<!-- Node20&#45;&gt;Node16 -->
+<g id="edge26_Node000020_Node000016" class="edge">
+<title>Node20&#45;&gt;Node16</title>
+<g id="a_edge26_Node000020_Node000016"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1742.57,-122.26C1837.33,-98.57 2029.88,-50.44 2119.18,-28.11"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2119.99,-31.52 2128.84,-25.7 2118.29,-24.73 2119.99,-31.52"/>
+</a>
+</g>
+</g>
+<!-- Node21&#45;&gt;Node20 -->
+<g id="edge29_Node000021_Node000020" class="edge">
+<title>Node21&#45;&gt;Node20</title>
+<g id="a_edge29_Node000021_Node000020"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1692.26,-187.86C1691.6,-180.77 1690.79,-172.04 1690.03,-163.88"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1693.53,-163.72 1689.12,-154.09 1686.56,-164.37 1693.53,-163.72"/>
+</a>
+</g>
+</g>
+<!-- Node22 -->
+<g id="Node000022" class="node">
+<title>Node22</title>
+<g id="a_Node000022"><a xlink:title=" ">
+<polygon fill="#e0e0e0" stroke="#999999" points="1576.25,-146.62 1525,-146.62 1525,-127.38 1576.25,-127.38 1576.25,-146.62"/>
+<text xml:space="preserve" text-anchor="middle" x="1550.62" y="-133.12" font-family="Helvetica,sans-Serif" font-size="10.00">memory</text>
+</a>
+</g>
+</g>
+<!-- Node21&#45;&gt;Node22 -->
+<g id="edge30_Node000021_Node000022" class="edge">
+<title>Node21&#45;&gt;Node22</title>
+<g id="a_edge30_Node000021_Node000022"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1661.18,-187.86C1637.13,-177.02 1604.59,-162.34 1581.04,-151.72"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1582.53,-148.55 1571.98,-147.63 1579.66,-154.93 1582.53,-148.55"/>
+</a>
+</g>
+</g>
+<!-- Node23&#45;&gt;Node17 -->
+<g id="edge33_Node000023_Node000017" class="edge">
+<title>Node23&#45;&gt;Node17</title>
+<g id="a_edge33_Node000023_Node000017"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2087.65,-187.78C2092.33,-169.1 2103.21,-137.44 2125.62,-121.75 2234.93,-45.26 2322.63,-172.92 2423.62,-85.75 2436.03,-75.04 2440.71,-57.1 2442.33,-42.13"/>
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+</a>
+</g>
+</g>
+<!-- Node23&#45;&gt;Node25 -->
+<g id="edge32_Node000023_Node000025" class="edge">
+<title>Node23&#45;&gt;Node25</title>
+<g id="a_edge32_Node000023_Node000025"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M2100.51,-187.86C2111.33,-177.89 2125.67,-164.68 2136.87,-154.36"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="2138.95,-157.2 2143.94,-147.85 2134.21,-152.05 2138.95,-157.2"/>
+</a>
+</g>
+</g>
+<!-- Node28&#45;&gt;Node7 -->
+<g id="edge35_Node000028_Node000007" class="edge">
+<title>Node28&#45;&gt;Node7</title>
+<g id="a_edge35_Node000028_Node000007"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M560.21,-187.89C529,-153.89 451.65,-69.65 418.32,-33.35"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="421.22,-31.32 411.87,-26.32 416.06,-36.06 421.22,-31.32"/>
+</a>
+</g>
+</g>
+<!-- Node28&#45;&gt;Node12 -->
+<g id="edge37_Node000028_Node000012" class="edge">
+<title>Node28&#45;&gt;Node12</title>
+<g id="a_edge37_Node000028_Node000012"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M585.99,-187.78C607.53,-162.35 653.65,-108.86 695.62,-66.5 707.17,-54.85 720.78,-42.4 731.57,-32.82"/>
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+</g>
+</g>
+<!-- Node28&#45;&gt;Node13 -->
+<g id="edge39_Node000028_Node000013" class="edge">
+<title>Node28&#45;&gt;Node13</title>
+<g id="a_edge39_Node000028_Node000013"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M573.99,-187.78C575.01,-162.36 578.89,-108.88 593.62,-66.5 597.48,-55.42 603.83,-44.03 609.6,-34.89"/>
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+</a>
+</g>
+</g>
+<!-- Node28&#45;&gt;Node29 -->
+<g id="edge36_Node000028_Node000029" class="edge">
+<title>Node28&#45;&gt;Node29</title>
+<g id="a_edge36_Node000028_Node000029"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M625.74,-194.76C641.15,-192.56 658.05,-190.22 673.62,-188.25 808.54,-171.18 966.42,-154.43 1055.96,-145.23"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1056.24,-148.72 1065.83,-144.22 1055.52,-141.76 1056.24,-148.72"/>
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+</g>
+</g>
+<!-- Node32 -->
+<g id="Node000032" class="node">
+<title>Node32</title>
+<g id="a_Node000032"><a xlink:title=" ">
+<polygon fill="#e0e0e0" stroke="#999999" points="1263.62,-146.62 1205.62,-146.62 1205.62,-127.38 1263.62,-127.38 1263.62,-146.62"/>
+<text xml:space="preserve" text-anchor="middle" x="1234.62" y="-133.12" font-family="Helvetica,sans-Serif" font-size="10.00">functional</text>
+</a>
+</g>
+</g>
+<!-- Node28&#45;&gt;Node32 -->
+<g id="edge38_Node000028_Node000032" class="edge">
+<title>Node28&#45;&gt;Node32</title>
+<g id="a_edge38_Node000028_Node000032"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M625.95,-194.31C641.29,-192.11 658.1,-189.89 673.62,-188.25 905.33,-163.8 968.93,-201.67 1196.62,-152.25 1198.65,-151.81 1200.72,-151.28 1202.79,-150.69"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="1203.82,-154.04 1212.21,-147.58 1201.62,-147.39 1203.82,-154.04"/>
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+</g>
+</g>
+<!-- Node37&#45;&gt;Node13 -->
+<g id="edge42_Node000037_Node000013" class="edge">
+<title>Node37&#45;&gt;Node13</title>
+<g id="a_edge42_Node000037_Node000013"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M731.29,-187.76C720.78,-178.28 707.53,-165.33 697.62,-152.25 668.55,-113.87 643.54,-62.86 631.08,-35.51"/>
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+</g>
+</g>
+<!-- Node37&#45;&gt;Node15 -->
+<g id="edge45_Node000037_Node000015" class="edge">
+<title>Node37&#45;&gt;Node15</title>
+<g id="a_edge45_Node000037_Node000015"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M736.69,-188.02C716.4,-161.56 679.96,-104.62 707.62,-66.5 714.22,-57.41 772.54,-40.1 815.47,-28.37"/>
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+</g>
+</g>
+<!-- Node37&#45;&gt;Node22 -->
+<g id="edge43_Node000037_Node000022" class="edge">
+<title>Node37&#45;&gt;Node22</title>
+<g id="a_edge43_Node000037_Node000022"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M815.62,-197.11C977.92,-184.06 1387.98,-151.08 1513.52,-140.98"/>
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+</g>
+</g>
+<!-- Node37&#45;&gt;Node43 -->
+<g id="edge44_Node000037_Node000043" class="edge">
+<title>Node37&#45;&gt;Node43</title>
+<g id="a_edge44_Node000037_Node000043"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M747.58,-188C746.9,-177.96 746.06,-164.3 745.62,-152.25 744.94,-133.51 744.71,-112.13 744.64,-96.98"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="748.14,-97.42 744.61,-87.43 741.14,-97.44 748.14,-97.42"/>
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+</g>
+</g>
+<!-- Node55&#45;&gt;Node10 -->
+<g id="edge54_Node000055_Node000010" class="edge">
+<title>Node55&#45;&gt;Node10</title>
+<g id="a_edge54_Node000055_Node000010"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M439.69,-254.42C426.03,-246.04 411.23,-234.11 403.62,-218.75 397.61,-206.6 401.58,-201.65 403.62,-188.25 412.17,-132.21 406,-110.59 441.62,-66.5 454.99,-49.96 475.34,-37.9 493.21,-29.74"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="494.44,-33.02 502.26,-25.87 491.69,-26.59 494.44,-33.02"/>
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+</g>
+</g>
+<!-- Node56&#45;&gt;Node6 -->
+<g id="edge57_Node000056_Node000006" class="edge">
+<title>Node56&#45;&gt;Node6</title>
+<g id="a_edge57_Node000056_Node000006"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1102.24,-398.51C999.68,-391.36 762.35,-373.81 563.62,-351.75 550.25,-350.27 535.94,-348.45 522.35,-346.62"/>
+<polygon fill="#63b8ff" stroke="#63b8ff" points="523.02,-343.18 512.64,-345.29 522.07,-350.12 523.02,-343.18"/>
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+</g>
+</g>
+<!-- Node56&#45;&gt;Node14 -->
+<g id="edge58_Node000056_Node000014" class="edge">
+<title>Node56&#45;&gt;Node14</title>
+<g id="a_edge58_Node000056_Node000014"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1154.6,-387.3C1156.38,-370.05 1161.42,-341.28 1175.62,-321.25 1222.14,-255.7 1267.72,-275.51 1324.62,-218.75 1350.07,-193.37 1353.66,-183.93 1370.62,-152.25 1391.84,-112.63 1409.52,-62.82 1418.42,-35.83"/>
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+</g>
+</g>
+<!-- Node56&#45;&gt;Node22 -->
+<g id="edge59_Node000056_Node000022" class="edge">
+<title>Node56&#45;&gt;Node22</title>
+<g id="a_edge59_Node000056_Node000022"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M1159.4,-387.26C1167.39,-368.86 1183.6,-337.81 1207.62,-321.25 1266.57,-280.63 1300.09,-316.23 1364.62,-285.25 1435.59,-251.19 1504.27,-185.91 1534.52,-155.01"/>
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+</g>
+</g>
+<!-- Node57&#45;&gt;Node6 -->
+<g id="edge61_Node000057_Node000006" class="edge">
+<title>Node57&#45;&gt;Node6</title>
+<g id="a_edge61_Node000057_Node000006"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M611.83,-453.86C586.08,-434.17 524.2,-386.87 487.77,-359.01"/>
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+</g>
+</g>
+<!-- Node57&#45;&gt;Node8 -->
+<g id="edge63_Node000057_Node000008" class="edge">
+<title>Node57&#45;&gt;Node8</title>
+<g id="a_edge63_Node000057_Node000008"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M621.93,-453.79C615.3,-415.04 595.07,-262.12 673.62,-188.25 722.86,-141.95 915.47,-183.06 975.62,-152.25 1000.67,-139.42 1021.21,-113.57 1033.19,-95.81"/>
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+</g>
+</g>
+<!-- Node57&#45;&gt;Node22 -->
+<g id="edge64_Node000057_Node000022" class="edge">
+<title>Node57&#45;&gt;Node22</title>
+<g id="a_edge64_Node000057_Node000022"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M650.25,-453.84C726.56,-427.92 952.58,-350.95 1139.62,-285.25 1278.78,-236.37 1443.85,-176.72 1515.04,-150.92"/>
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+</g>
+</g>
+<!-- Node57&#45;&gt;Node56 -->
+<g id="edge62_Node000057_Node000056" class="edge">
+<title>Node57&#45;&gt;Node56</title>
+<g id="a_edge62_Node000057_Node000056"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M680.81,-459.61C768.82,-454.08 942.61,-441.18 1088.62,-418.25 1089.46,-418.12 1090.3,-417.98 1091.14,-417.84"/>
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+</g>
+</g>
+<!-- Node58&#45;&gt;Node6 -->
+<g id="edge68_Node000058_Node000006" class="edge">
+<title>Node58&#45;&gt;Node6</title>
+<g id="a_edge68_Node000058_Node000006"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M459.62,-509.14C459.62,-477.65 459.62,-403.06 459.62,-363.38"/>
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+</g>
+</g>
+<!-- Node58&#45;&gt;Node7 -->
+<g id="edge72_Node000058_Node000007" class="edge">
+<title>Node58&#45;&gt;Node7</title>
+<g id="a_edge72_Node000058_Node000007"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M429.77,-509.12C367.11,-476.07 227.62,-389.23 227.62,-271 227.62,-271 227.62,-271 227.62,-136 227.62,-75.98 298.6,-43.84 350.15,-28.41"/>
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+</g>
+</g>
+<!-- Node58&#45;&gt;Node8 -->
+<g id="edge70_Node000058_Node000008" class="edge">
+<title>Node58&#45;&gt;Node8</title>
+<g id="a_edge70_Node000058_Node000008"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M451.5,-509.23C421.98,-454.45 327.53,-259.76 433.62,-188.25 521.04,-129.33 809.99,-194.37 906.62,-152.25 924.93,-144.27 922.85,-132.59 939.62,-121.75 960.07,-108.53 985.09,-97.72 1005.57,-90.05"/>
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+</g>
+</g>
+<!-- Node58&#45;&gt;Node14 -->
+<g id="edge66_Node000058_Node000014" class="edge">
+<title>Node58&#45;&gt;Node14</title>
+<g id="a_edge66_Node000058_Node000014"><a xlink:title=" ">
+<path fill="none" stroke="#63b8ff" d="M511.4,-522.8C651.42,-519.16 1048.42,-501.67 1365.62,-418.25 1439.31,-398.87 1481.48,-415.22 1523.62,-351.75 1594.32,-245.29 1481.89,-87.15 1439.64,-34.23"/>
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+</g>
+</g>
+<!-- Node58&#45;&gt;Node17 -->
+<g id="edge71_Node000058_Node000017" class="edge">
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diff --git a/docs/html/py__policy_8cpp__incl_org.svg b/docs/html/py__policy_8cpp__incl_org.svg
index 9e73bf1f..2132f71a 100644
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+<!-- Node18&#45;&gt;Node37 -->
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+<!-- Node46&#45;&gt;Node24 -->
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+<title>Node47&#45;&gt;Node12</title>
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+<!-- Node47&#45;&gt;Node21 -->
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+<!-- Node47&#45;&gt;Node46 -->
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+<title>Node47&#45;&gt;Node46</title>
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+<!-- Node48&#45;&gt;Node10 -->
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+<title>Node48&#45;&gt;Node10</title>
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+<!-- Node48&#45;&gt;Node12 -->
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+<title>Node48&#45;&gt;Node12</title>
+<g id="a_edge77_Node000048_Node000012"><a xlink:title=" ">
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+<g id="edge78_Node000048_Node000021" class="edge">
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+<!-- Node48&#45;&gt;Node24 -->
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+<title>Node48&#45;&gt;Node24</title>
+<g id="a_edge76_Node000048_Node000024"><a xlink:title=" ">
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+<title>Node48&#45;&gt;Node46</title>
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+<!-- Node51&#45;&gt;Node10 -->
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+<title>Node51&#45;&gt;Node10</title>
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+<!-- Node51&#45;&gt;Node13 -->
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+<!-- Node17&#45;&gt;Node18 -->
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+<!-- Node19&#45;&gt;Node2 -->
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index 49c82839..a427e840 100644
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diff --git a/docs/html/resize.js b/docs/html/resize.js
index aaeb6fc0..178d03bc 100644
--- a/docs/html/resize.js
+++ b/docs/html/resize.js
@@ -22,61 +22,21 @@
 
  @licend  The above is the entire license notice for the JavaScript code in this file
  */
-var once=1;
-function initResizable()
-{
-  var cookie_namespace = 'doxygen';
-  var sidenav,navtree,content,header,barWidth=6,desktop_vp=768,titleHeight;
 
-  function readSetting(cookie)
-  {
-    if (window.chrome) {
-      var val = localStorage.getItem(cookie_namespace+'_width');
-      if (val) return val;
-    } else {
-      var myCookie = cookie_namespace+"_"+cookie+"=";
-      if (document.cookie) {
-        var index = document.cookie.indexOf(myCookie);
-        if (index != -1) {
-          var valStart = index + myCookie.length;
-          var valEnd = document.cookie.indexOf(";", valStart);
-          if (valEnd == -1) {
-            valEnd = document.cookie.length;
-          }
-          var val = document.cookie.substring(valStart, valEnd);
-          return val;
-        }
-      }
-    }
-    return 250;
-  }
+function initResizable(treeview) {
+  let sidenav,navtree,content,header,footer,barWidth=6;
+  const RESIZE_COOKIE_NAME = ''+'width';
 
-  function writeSetting(cookie, val)
-  {
-    if (window.chrome) {
-      localStorage.setItem(cookie_namespace+"_width",val);
-    } else {
-      var date = new Date();
-      date.setTime(date.getTime()+(10*365*24*60*60*1000)); // default expiration is one week
-      expiration = date.toGMTString();
-      document.cookie = cookie_namespace + "_" + cookie + "=" + val + "; SameSite=Lax; expires=" + expiration+"; path=/";
-    }
-  }
-
-  function resizeWidth()
-  {
-    var windowWidth = $(window).width() + "px";
-    var sidenavWidth = $(sidenav).outerWidth();
+  function resizeWidth() {
+    const sidenavWidth = $(sidenav).outerWidth();
     content.css({marginLeft:parseInt(sidenavWidth)+"px"});
     if (typeof page_layout!=='undefined' && page_layout==1) {
       footer.css({marginLeft:parseInt(sidenavWidth)+"px"});
     }
-    writeSetting('width',sidenavWidth-barWidth);
+    Cookie.writeSetting(RESIZE_COOKIE_NAME,sidenavWidth-barWidth);
   }
 
-  function restoreWidth(navWidth)
-  {
-    var windowWidth = $(window).width() + "px";
+  function restoreWidth(navWidth) {
     content.css({marginLeft:parseInt(navWidth)+barWidth+"px"});
     if (typeof page_layout!=='undefined' && page_layout==1) {
       footer.css({marginLeft:parseInt(navWidth)+barWidth+"px"});
@@ -84,72 +44,104 @@ function initResizable()
     sidenav.css({width:navWidth + "px"});
   }
 
-  function resizeHeight()
-  {
-    var headerHeight = header.outerHeight();
-    var footerHeight = footer.outerHeight();
-    var windowHeight = $(window).height();
-    var contentHeight,navtreeHeight,sideNavHeight;
-    if (typeof page_layout==='undefined' || page_layout==0) { /* DISABLE_INDEX=NO */
-      contentHeight = windowHeight - headerHeight - footerHeight;
-      navtreeHeight = contentHeight;
-      sideNavHeight = contentHeight;
-    } else if (page_layout==1) { /* DISABLE_INDEX=YES */
-      contentHeight = windowHeight - footerHeight;
-      navtreeHeight = windowHeight - headerHeight;
-      sideNavHeight = windowHeight;
+  function resizeHeight(treeview) {
+    const headerHeight = header.outerHeight();
+    const windowHeight = $(window).height();
+    let contentHeight;
+    if (treeview)
+    {
+      const footerHeight = footer.outerHeight();
+      let navtreeHeight,sideNavHeight;
+      if (typeof page_layout==='undefined' || page_layout==0) { /* DISABLE_INDEX=NO */
+        contentHeight = windowHeight - headerHeight - footerHeight;
+        navtreeHeight = contentHeight;
+        sideNavHeight = contentHeight;
+      } else if (page_layout==1) { /* DISABLE_INDEX=YES */
+        contentHeight = windowHeight - footerHeight;
+        navtreeHeight = windowHeight - headerHeight;
+        sideNavHeight = windowHeight;
+      }
+      navtree.css({height:navtreeHeight + "px"});
+      sidenav.css({height:sideNavHeight + "px"});
+    }
+    else
+    {
+      contentHeight = windowHeight - headerHeight;
     }
     content.css({height:contentHeight + "px"});
-    navtree.css({height:navtreeHeight + "px"});
-    sidenav.css({height:sideNavHeight + "px"});
     if (location.hash.slice(1)) {
       (document.getElementById(location.hash.slice(1))||document.body).scrollIntoView();
     }
   }
 
-  function collapseExpand()
-  {
-    var newWidth;
+  function collapseExpand() {
+    let newWidth;
     if (sidenav.width()>0) {
       newWidth=0;
-    }
-    else {
-      var width = readSetting('width');
+    } else {
+      const width = Cookie.readSetting(RESIZE_COOKIE_NAME,250);
       newWidth = (width>250 && width<$(window).width()) ? width : 250;
     }
     restoreWidth(newWidth);
-    var sidenavWidth = $(sidenav).outerWidth();
-    writeSetting('width',sidenavWidth-barWidth);
+    const sidenavWidth = $(sidenav).outerWidth();
+    Cookie.writeSetting(RESIZE_COOKIE_NAME,sidenavWidth-barWidth);
   }
 
   header  = $("#top");
-  sidenav = $("#side-nav");
   content = $("#doc-content");
-  navtree = $("#nav-tree");
   footer  = $("#nav-path");
-  $(".side-nav-resizable").resizable({resize: function(e, ui) { resizeWidth(); } });
-  $(sidenav).resizable({ minWidth: 0 });
-  $(window).resize(function() { resizeHeight(); });
-  var device = navigator.userAgent.toLowerCase();
-  var touch_device = device.match(/(iphone|ipod|ipad|android)/);
-  if (touch_device) { /* wider split bar for touch only devices */
-    $(sidenav).css({ paddingRight:'20px' });
-    $('.ui-resizable-e').css({ width:'20px' });
-    $('#nav-sync').css({ right:'34px' });
-    barWidth=20;
+  sidenav = $("#side-nav");
+  if (!treeview) {
+//    title   = $("#titlearea");
+//    titleH  = $(title).height();
+//    let animating = false;
+//    content.on("scroll", function() {
+//      slideOpts = { duration: 200,
+//                    step: function() {
+//                        contentHeight = $(window).height() - header.outerHeight();
+//                        content.css({ height : contentHeight + "px" });
+//                      },
+//                    done: function() { animating=false; }
+//                  };
+//      if (content.scrollTop()>titleH && title.css('display')!='none' && !animating) {
+//        title.slideUp(slideOpts);
+//        animating=true;
+//      } else if (content.scrollTop()<=titleH && title.css('display')=='none' && !animating) {
+//        title.slideDown(slideOpts);
+//        animating=true;
+//      }
+//    });
+  } else {
+    navtree = $("#nav-tree");
+    $(".side-nav-resizable").resizable({resize: function(e, ui) { resizeWidth(); } });
+    $(sidenav).resizable({ minWidth: 0 });
   }
-  var width = readSetting('width');
-  if (width) { restoreWidth(width); } else { resizeWidth(); }
-  resizeHeight();
-  var url = location.href;
-  var i=url.indexOf("#");
+  $(window).resize(function() { resizeHeight(treeview); });
+  if (treeview)
+  {
+    const device = navigator.userAgent.toLowerCase();
+    const touch_device = device.match(/(iphone|ipod|ipad|android)/);
+    if (touch_device) { /* wider split bar for touch only devices */
+      $(sidenav).css({ paddingRight:'20px' });
+      $('.ui-resizable-e').css({ width:'20px' });
+      $('#nav-sync').css({ right:'34px' });
+      barWidth=20;
+    }
+    const width = Cookie.readSetting(RESIZE_COOKIE_NAME,250);
+    if (width) { restoreWidth(width); } else { resizeWidth(); }
+  }
+  resizeHeight(treeview);
+  const url = location.href;
+  const i=url.indexOf("#");
   if (i>=0) window.location.hash=url.substr(i);
-  var _preventDefault = function(evt) { evt.preventDefault(); };
-  $("#splitbar").bind("dragstart", _preventDefault).bind("selectstart", _preventDefault);
-  if (once) {
+  const _preventDefault = function(evt) { evt.preventDefault(); };
+  if (treeview)
+  {
+    $("#splitbar").bind("dragstart", _preventDefault).bind("selectstart", _preventDefault);
     $(".ui-resizable-handle").dblclick(collapseExpand);
-    once=0
+    // workaround for firefox
+    $("body").css({overflow: "hidden"});
   }
-  $(window).on('load',resizeHeight);
+  $(window).on('load',function() { resizeHeight(treeview); });
 }
 /* @license-end */
diff --git a/docs/html/scratchpad__abstract_8h.html b/docs/html/scratchpad__abstract_8h.html
new file mode 100644
index 00000000..6c3bef0e
--- /dev/null
+++ b/docs/html/scratchpad__abstract_8h.html
@@ -0,0 +1,197 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" lang="en-US">
+<head>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=11"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: src/include/gridfire/engine/scratchpads/scratchpad_abstract.h File Reference</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
+<script type="text/javascript" src="clipboard.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
+<link href="search/search.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="search/searchdata.js"></script>
+<script type="text/javascript" src="search/search.js"></script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
+<link href="doxygen-awesome.css" rel="stylesheet" type="text/css"/>
+<link href="doxygen-awesome-sidebar-only.css" rel="stylesheet" type="text/css"/>
+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+var searchBox = new SearchBox("searchBox", "search/",'.html');
+/* @license-end */
+</script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function() { codefold.init(0); });
+/* @license-end */
+</script>
+<script type="text/javascript" src="menudata.js"></script>
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+  <div class="summary">
+<a href="#nested-classes">Classes</a> &#124;
+<a href="#namespaces">Namespaces</a>  </div>
+  <div class="headertitle"><div class="title">scratchpad_abstract.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Abstract base class for scratchpad memory used during engine computations.  
+<a href="#details">More...</a></p>
+<div class="textblock"><code>#include &lt;memory&gt;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for scratchpad_abstract.h:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="scratchpad__abstract_8h__incl.svg" width="218" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
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+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
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+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="nested-classes" name="nested-classes"></a>
+Classes</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td></tr>
+<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Abstract base struct for engine scratchpad memory.  <a href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#details">More...</a><br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire.html">gridfire</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine.html">gridfire::engine</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Abstract base class for scratchpad memory used during engine computations. </p>
+<p>This header defines the AbstractScratchPad interface, which provides a common contract for temporary working memory (scratchpads) used by computational engines. Scratchpads are designed to store intermediate results, cached computations, or pre-allocated buffers that can be reused across multiple computational steps, improving performance by avoiding repeated memory allocations.</p>
+<dl class="section user"><dt>Purpose</dt><dd>The scratchpad pattern allows engines to:<ul>
+<li>Pre-allocate working memory once and reuse it across iterations</li>
+<li>Store intermediate computational results between solver steps</li>
+<li>Enable efficient cloning for parallel execution contexts</li>
+<li>Provide a type-erased interface for heterogeneous scratchpad management</li>
+</ul>
+</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="comment">// Define a concrete scratchpad for a specific engine</span></div>
+<div class="line"><span class="keyword">class </span>MyScratchPad : <span class="keyword">public</span> <a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a> {</div>
+<div class="line"><span class="keyword">public</span>:</div>
+<div class="line">    MyScratchPad() : initialized_(false) {}</div>
+<div class="line"> </div>
+<div class="line">    <span class="keywordtype">void</span> initialize(<span class="keywordtype">size_t</span> size) {</div>
+<div class="line">        buffer_.resize(size);</div>
+<div class="line">        initialized_ = <span class="keyword">true</span>;</div>
+<div class="line">    }</div>
+<div class="line"> </div>
+<div class="line">    [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#a1ee6453778d15be0b6dc546f1e5e4768">is_initialized</a>()<span class="keyword"> const override </span>{</div>
+<div class="line">        <span class="keywordflow">return</span> initialized_;</div>
+<div class="line">    }</div>
+<div class="line"> </div>
+<div class="line">    [[nodiscard]] std::unique_ptr&lt;AbstractScratchPad&gt; <a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">clone</a>()<span class="keyword"> const override </span>{</div>
+<div class="line">        <span class="keyword">auto</span> copy = std::make_unique&lt;MyScratchPad&gt;();</div>
+<div class="line">        copy-&gt;buffer_ = buffer_;</div>
+<div class="line">        copy-&gt;initialized_ = initialized_;</div>
+<div class="line">        <span class="keywordflow">return</span> copy;</div>
+<div class="line">    }</div>
+<div class="line"> </div>
+<div class="line"><span class="keyword">private</span>:</div>
+<div class="line">    std::vector&lt;double&gt; buffer_;</div>
+<div class="line">    <span class="keywordtype">bool</span> initialized_;</div>
+<div class="line">};</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Usage in an engine context</span></div>
+<div class="line"><span class="keyword">auto</span> scratch = std::make_unique&lt;MyScratchPad&gt;();</div>
+<div class="line">scratch-&gt;initialize(1024);</div>
+<div class="line"> </div>
+<div class="line"><span class="keywordflow">if</span> (scratch-&gt;is_initialized()) {</div>
+<div class="line">    <span class="comment">// Use scratchpad for computations</span></div>
+<div class="line">    <span class="keyword">auto</span> parallel_scratch = scratch-&gt;clone();  <span class="comment">// Clone for parallel worker</span></div>
+<div class="line">}</div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></div><div class="ttdoc">Abstract base struct for engine scratchpad memory.</div><div class="ttdef"><b>Definition</b> scratchpad_abstract.h:82</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_html_a1ee6453778d15be0b6dc546f1e5e4768"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#a1ee6453778d15be0b6dc546f1e5e4768">gridfire::engine::scratch::AbstractScratchPad::is_initialized</a></div><div class="ttdeci">virtual bool is_initialized() const =0</div><div class="ttdoc">Check whether the scratchpad has been properly initialized.</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad_html_aaaa5135efe8b9635e8f91797e9c85b3e"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">gridfire::engine::scratch::AbstractScratchPad::clone</a></div><div class="ttdeci">virtual std::unique_ptr&lt; AbstractScratchPad &gt; clone() const =0</div><div class="ttdoc">Create a deep copy of this scratchpad.</div></div>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="header">
+  <div class="summary">
+<a href="#namespaces">Namespaces</a>  </div>
+  <div class="headertitle"><div class="title">scratchpads.h File Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Unified header for the scratchpad memory management system.  
+<a href="#details">More...</a></p>
+<div class="textblock"><code>#include &quot;<a class="el" href="scratchpad__abstract_8h.html">gridfire/engine/scratchpads/scratchpad_abstract.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__graph__scratchpad_8h.html">gridfire/engine/scratchpads/engine_graph_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__adaptive__scratchpad_8h.html">gridfire/engine/scratchpads/engine_adaptive_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__multiscale__scratchpad_8h.html">gridfire/engine/scratchpads/engine_multiscale_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine__defined__scratchpad_8h.html">gridfire/engine/scratchpads/engine_defined_scratchpad.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2types_8h.html">gridfire/engine/scratchpads/types.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="blob_8h.html">gridfire/engine/scratchpads/blob.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2utils_8h.html">gridfire/engine/scratchpads/utils.h</a>&quot;</code><br />
+<code>#include &quot;<a class="el" href="engine_2scratchpads_2formatters_8h.html">gridfire/engine/scratchpads/formatters.h</a>&quot;</code><br />
+</div><div class="textblock"><div class="dynheader">
+Include dependency graph for scratchpads.h:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="scratchpads_8h__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><div class="textblock"><div class="dynheader">
+This graph shows which files directly or indirectly include this file:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="scratchpads_8h__dep__incl.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+</div>
+</div><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="namespaces" name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></td></tr>
+<tr class="memdesc:namespacegridfire_1_1engine_1_1scratch"><td class="mdescLeft">&#160;</td><td class="mdescRight">Scratchpad memory management for computational engines. <br /></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Unified header for the scratchpad memory management system. </p>
+<p>This is the main include file for the scratchpad subsystem. It provides a single include point for all scratchpad-related functionality, including the abstract base class, concrete implementations, type definitions, the StateBlob container, utility functions, and formatters for debugging.</p>
+<dl class="section user"><dt>What are Scratchpads?</dt><dd>Scratchpads are temporary working memory containers used by computational engines during ODE integration and reaction network calculations. They serve several critical purposes:</dd></dl>
+<ul>
+<li><b>Performance</b>: Pre-allocate memory once and reuse across iterations, avoiding repeated heap allocations during time-critical computations.</li>
+<li><b>Caching</b>: Store intermediate results (Jacobians, derivatives, etc.) that can be reused across solver steps.</li>
+<li><b>Thread Safety</b>: Provide thread-local storage for parallel execution, where each thread operates on its own independent scratchpad instance.</li>
+<li><b>State Management</b>: Encapsulate engine-specific working state separate from the engine's persistent configuration.</li>
+</ul>
+<dl class="section user"><dt>Architecture Overview</dt><dd>The scratchpad system consists of:</dd></dl>
+<ul>
+<li><b>AbstractScratchPad</b>: Base interface defining <code>is_initialized()</code> and <code>clone()</code></li>
+<li><b>Concrete Scratchpads</b>: Engine-specific implementations<ul>
+<li><code>GraphEngineScratchPad</code>: CppAD ADFun and Jacobian caches</li>
+<li><code>AdaptiveEngineViewScratchPad</code>: Active species/reactions for adaptive networks</li>
+<li><code>DefinedEngineViewScratchPad</code>: Species/reactions for static networks</li>
+<li><code>MultiscalePartitioningEngineViewScratchPad</code>: QSE groups and SUNDIALS context</li>
+</ul>
+</li>
+<li><b>StateBlob</b>: Container managing multiple scratchpads with type-safe access</li>
+<li><b>Utilities</b>: Helper functions for exception-based retrieval</li>
+<li><b>Formatters</b>: std::format specializations for debugging output</li>
+</ul>
+<dl class="section user"><dt>Why Use Scratchpads?</dt><dd>During numerical integration of stiff reaction networks, engines must:<ol type="1">
+<li>Evaluate right-hand side functions (species derivatives)</li>
+<li>Compute sparse Jacobian matrices</li>
+<li>Solve linear systems within Newton iterations</li>
+</ol>
+</dd></dl>
+<p>These operations require substantial temporary memory. Without scratchpads, each evaluation would allocate and deallocate working buffers, causing:</p><ul>
+<li>Memory fragmentation</li>
+<li>Cache thrashing</li>
+<li>Unnecessary allocation overhead</li>
+</ul>
+<p>Scratchpads solve this by providing persistent, reusable working memory that lives for the duration of an integration step (or longer).</p>
+<dl class="section user"><dt>Thread Safety Model</dt><dd>The scratchpad system is designed for thread-local usage:</dd></dl>
+<ul>
+<li>Scratchpads are <b>not thread-safe</b> by design</li>
+<li>Each thread must have its own scratchpad instances</li>
+<li>Use <code>StateBlob::clone_structure()</code> to create independent copies for workers</li>
+<li>The original scratchpad/blob remains usable by the main thread</li>
+</ul>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="preprocessor">#include &quot;<a class="code" href="scratchpads_8h.html">gridfire/engine/scratchpads/scratchpads.h</a>&quot;</span></div>
+<div class="line"> </div>
+<div class="line"><span class="keyword">using namespace </span><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a>;</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// === Basic Usage ===</span></div>
+<div class="line"><span class="comment">// Create a StateBlob and enroll scratchpads</span></div>
+<div class="line"><a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a> blob;</div>
+<div class="line">blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line">blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">enroll</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">AdaptiveEngineViewScratchPad</a>&gt;();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Initialize scratchpads</span></div>
+<div class="line"><span class="keyword">auto</span>* graph_scratch = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad&gt;</a>(blob);</div>
+<div class="line">graph_scratch-&gt;<a class="code hl_function" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a8fc25bac8529777504a206fc9fa2a5d6">initialize</a>(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Use initialized scratchpad</span></div>
+<div class="line"><span class="keyword">auto</span>* <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad, true&gt;</a>(blob);  <span class="comment">// Throws if not initialized</span></div>
+<div class="line"><span class="keyword">auto</span>&amp; adfun = <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;rhsADFun.value();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// === Parallel Execution ===</span></div>
+<div class="line"><span class="comment">// Clone for worker threads</span></div>
+<div class="line">std::vector&lt;std::unique_ptr&lt;StateBlob&gt;&gt; worker_blobs;</div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keywordtype">int</span> i = 0; i &lt; num_threads; ++i) {</div>
+<div class="line">    worker_blobs.push_back(blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa45357f0c368d7403306452c5ea56af0">clone_structure</a>());</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Each worker uses its own blob</span></div>
+<div class="line"><span class="preprocessor">#pragma omp parallel for</span></div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keywordtype">int</span> i = 0; i &lt; work_items; ++i) {</div>
+<div class="line">    <span class="keywordtype">int</span> tid = omp_get_thread_num();</div>
+<div class="line">    <a class="code hl_class" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">StateBlob</a>&amp; my_blob = *worker_blobs[tid];</div>
+<div class="line">    <span class="keyword">auto</span>* my_scratch = <a class="code hl_function" href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">get_state&lt;GraphEngineScratchPad&gt;</a>(my_blob);</div>
+<div class="line">    <span class="comment">// Thread-safe: each thread has its own scratchpad</span></div>
+<div class="line">    compute_with_scratchpad(*my_scratch);</div>
+<div class="line">}</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// === Debugging ===</span></div>
+<div class="line"><span class="comment">// Use formatters for logging</span></div>
+<div class="line">std::cout &lt;&lt; std::format(<span class="stringliteral">&quot;Blob state: {}\n&quot;</span>, blob);</div>
+<div class="line"><span class="comment">// Output: StateBlob(Enrolled: GraphEngineScratchPad(...), AdaptiveEngineViewScratchPad(...))</span></div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Check status</span></div>
+<div class="line"><span class="keyword">auto</span> status = blob.<a class="code hl_function" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a1633fec8fc3592bdf954ee1603f5e2a8">get_status</a>&lt;<a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a>&gt;();</div>
+<div class="line"><span class="keywordflow">if</span> (status == <a class="code hl_enumvalue" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5">StateBlob::ScratchPadStatus::ENROLLED_NOT_INITIALIZED</a>) {</div>
+<div class="line">    <span class="comment">// Need to initialize before use</span></div>
+<div class="line">}</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a></div><div class="ttdoc">Container for managing a collection of typed scratchpad instances.</div><div class="ttdef"><b>Definition</b> blob.h:114</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a1633fec8fc3592bdf954ee1603f5e2a8"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a1633fec8fc3592bdf954ee1603f5e2a8">gridfire::engine::scratch::StateBlob::get_status</a></div><div class="ttdeci">ScratchPadStatus get_status() const</div><div class="ttdoc">Get the status of a specific scratchpad type.</div><div class="ttdef"><b>Definition</b> blob.h:445</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#a8c998621c476665e812be930664286e6ad6d348ab4faddf5de5ec5aa302695ab5">gridfire::engine::scratch::StateBlob::ScratchPadStatus::ENROLLED_NOT_INITIALIZED</a></div><div class="ttdeci">@ ENROLLED_NOT_INITIALIZED</div><div class="ttdoc">Scratchpad enrolled but not yet initialized.</div><div class="ttdef"><b>Definition</b> blob.h:164</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aa06d7bb89e67c4b6fd584d8f32a251bf"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa06d7bb89e67c4b6fd584d8f32a251bf">gridfire::engine::scratch::StateBlob::enroll</a></div><div class="ttdeci">void enroll()</div><div class="ttdoc">Enroll a new scratchpad type into the blob.</div><div class="ttdef"><b>Definition</b> blob.h:196</div></div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1scratch_1_1_state_blob_html_aa45357f0c368d7403306452c5ea56af0"><div class="ttname"><a href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html#aa45357f0c368d7403306452c5ea56af0">gridfire::engine::scratch::StateBlob::clone_structure</a></div><div class="ttdeci">std::unique_ptr&lt; StateBlob &gt; clone_structure() const</div><div class="ttdoc">Create a deep copy of this blob with all enrolled scratchpads.</div><div class="ttdef"><b>Definition</b> blob.h:361</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html_ab8f89f710094bfc93b84e26c818249b9"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html#ab8f89f710094bfc93b84e26c818249b9">gridfire::engine::scratch::get_state</a></div><div class="ttdeci">CTX * get_state(StateBlob &amp;ctx)</div><div class="ttdoc">Retrieve a scratchpad from a StateBlob, throwing on error.</div><div class="ttdef"><b>Definition</b> utils.h:84</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="ascratchpads_8h_html"><div class="ttname"><a href="scratchpads_8h.html">scratchpads.h</a></div><div class="ttdoc">Unified header for the scratchpad memory management system.</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for storing working memory used by AdaptiveEngineView computations.</div><div class="ttdef"><b>Definition</b> engine_adaptive_scratchpad.h:66</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_html_a8fc25bac8529777504a206fc9fa2a5d6"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a8fc25bac8529777504a206fc9fa2a5d6">gridfire::engine::scratch::AdaptiveEngineViewScratchPad::initialize</a></div><div class="ttdeci">void initialize(const AdaptiveEngineView &amp;engine)</div><div class="ttdoc">Initialize the scratchpad from an AdaptiveEngineView.</div><div class="ttdef"><b>Definition</b> engine_adaptive_scratchpad.h:102</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></div><div class="ttdoc">Scratchpad for storing CppAD automatic differentiation state for GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:83</div></div>
+</div><!-- fragment --></dd></dl>
+<dl class="section user"><dt>Included Headers</dt><dd>This header includes:<ul>
+<li><a class="el" href="scratchpad__abstract_8h.html" title="Abstract base class for scratchpad memory used during engine computations.">scratchpad_abstract.h</a> - AbstractScratchPad base class</li>
+<li><a class="el" href="engine__graph__scratchpad_8h.html" title="Scratchpad implementation for the GraphEngine using CppAD automatic differentiation.">engine_graph_scratchpad.h</a> - GraphEngineScratchPad</li>
+<li><a class="el" href="engine__adaptive__scratchpad_8h.html" title="Scratchpad implementation for the AdaptiveEngineView.">engine_adaptive_scratchpad.h</a> - AdaptiveEngineViewScratchPad</li>
+<li><a class="el" href="engine__multiscale__scratchpad_8h.html" title="Scratchpad implementation for the MultiscalePartitioningEngineView.">engine_multiscale_scratchpad.h</a> - MultiscalePartitioningEngineViewScratchPad</li>
+<li><a class="el" href="engine__defined__scratchpad_8h.html" title="Scratchpad implementation for the DefinedEngineView.">engine_defined_scratchpad.h</a> - DefinedEngineViewScratchPad</li>
+<li>types.h - ScratchPadType enumeration</li>
+<li><a class="el" href="blob_8h.html" title="Container class for managing multiple scratchpad instances.">blob.h</a> - StateBlob container</li>
+<li>utils.h - get_state() helper functions</li>
+<li>formatters.h - std::format specializations</li>
+</ul>
+</dd></dl>
+<dl class="section see"><dt>See also</dt><dd>AbstractScratchPad </dd>
+<dd>
+StateBlob </dd>
+<dd>
+ScratchPadType </dd></dl>
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@@ -1,6 +1,7 @@
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+  ['blob_2eh_2',['blob.h',['../blob_8h.html',1,'']]],
+  ['building_2eh_3',['building.h',['../building_8h.html',1,'']]]
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diff --git a/docs/html/search/files_10.js b/docs/html/search/files_10.js
index 8dbfd049..e7772c31 100644
--- a/docs/html/search/files_10.js
+++ b/docs/html/search/files_10.js
@@ -8,5 +8,5 @@ var searchData=
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   ['triggers_2eh_7',['triggers.h',['../triggers_8h.html',1,'']]],
-  ['types_2eh_8',['types.h',['../types_8h.html',1,'']]]
+  ['types_2eh_8',['types.h',['../engine_2scratchpads_2types_8h.html',1,'(Global Namespace)'],['../types_2types_8h.html',1,'(Global Namespace)']]]
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diff --git a/docs/html/search/files_11.js b/docs/html/search/files_11.js
index 761011d8..ab686a1c 100644
--- a/docs/html/search/files_11.js
+++ b/docs/html/search/files_11.js
@@ -1,5 +1,5 @@
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diff --git a/docs/html/search/files_2.js b/docs/html/search/files_2.js
index c73797ae..03149a78 100644
--- a/docs/html/search/files_2.js
+++ b/docs/html/search/files_2.js
@@ -2,8 +2,7 @@ var searchData=
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-  ['cvode_5fsolver_5fstrategy_2eh_5',['CVODE_solver_strategy.h',['../CVODE__solver__strategy_8h.html',1,'']]]
+  ['config_2eh_2',['config.h',['../config_8h.html',1,'']]],
+  ['construction_2ecpp_3',['construction.cpp',['../construction_8cpp.html',1,'']]],
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diff --git a/docs/html/search/files_4.js b/docs/html/search/files_4.js
index c3e8299d..6d0dd7e5 100644
--- a/docs/html/search/files_4.js
+++ b/docs/html/search/files_4.js
@@ -4,26 +4,31 @@ var searchData=
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-  ['exceptions_2eh_25',['exceptions.h',['../exceptions_8h.html',1,'']]]
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+  ['engine_5fdefined_2ecpp_5',['engine_defined.cpp',['../engine__defined_8cpp.html',1,'']]],
+  ['engine_5fdefined_2eh_6',['engine_defined.h',['../engine__defined_8h.html',1,'']]],
+  ['engine_5fdefined_5fscratchpad_2eh_7',['engine_defined_scratchpad.h',['../engine__defined__scratchpad_8h.html',1,'']]],
+  ['engine_5fgraph_2ecpp_8',['engine_graph.cpp',['../engine__graph_8cpp.html',1,'']]],
+  ['engine_5fgraph_2eh_9',['engine_graph.h',['../engine__graph_8h.html',1,'']]],
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+  ['engine_5fmultiscale_2eh_12',['engine_multiscale.h',['../engine__multiscale_8h.html',1,'']]],
+  ['engine_5fmultiscale_5fscratchpad_2eh_13',['engine_multiscale_scratchpad.h',['../engine__multiscale__scratchpad_8h.html',1,'']]],
+  ['engine_5fpartitioning_5ftrigger_2ecpp_14',['engine_partitioning_trigger.cpp',['../engine__partitioning__trigger_8cpp.html',1,'']]],
+  ['engine_5fpartitioning_5ftrigger_2eh_15',['engine_partitioning_trigger.h',['../engine__partitioning__trigger_8h.html',1,'']]],
+  ['engine_5fpriming_2ecpp_16',['engine_priming.cpp',['../engine__priming_8cpp.html',1,'']]],
+  ['engine_5fpriming_2eh_17',['engine_priming.h',['../engine__priming_8h.html',1,'']]],
+  ['engine_5fprocedures_2eh_18',['engine_procedures.h',['../engine__procedures_8h.html',1,'']]],
+  ['engine_5ftypes_2eh_19',['engine_types.h',['../engine__types_8h.html',1,'']]],
+  ['engine_5fview_5fabstract_2eh_20',['engine_view_abstract.h',['../engine__view__abstract_8h.html',1,'']]],
+  ['engine_5fviews_2eh_21',['engine_views.h',['../engine__views_8h.html',1,'']]],
+  ['error_5fdebug_2eh_22',['error_debug.h',['../error__debug_8h.html',1,'']]],
+  ['error_5fengine_2eh_23',['error_engine.h',['../error__engine_8h.html',1,'']]],
+  ['error_5fgridfire_2eh_24',['error_gridfire.h',['../error__gridfire_8h.html',1,'']]],
+  ['error_5fpolicy_2eh_25',['error_policy.h',['../error__policy_8h.html',1,'']]],
+  ['error_5freaction_2eh_26',['error_reaction.h',['../error__reaction_8h.html',1,'']]],
+  ['error_5fscratchpad_2eh_27',['error_scratchpad.h',['../error__scratchpad_8h.html',1,'']]],
+  ['error_5fsolver_2eh_28',['error_solver.h',['../error__solver_8h.html',1,'']]],
+  ['error_5futils_2eh_29',['error_utils.h',['../error__utils_8h.html',1,'']]],
+  ['exceptions_2eh_30',['exceptions.h',['../exceptions_8h.html',1,'']]]
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diff --git a/docs/html/search/files_5.js b/docs/html/search/files_5.js
index ab93ce15..bf1e6109 100644
--- a/docs/html/search/files_5.js
+++ b/docs/html/search/files_5.js
@@ -1,4 +1,4 @@
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+  ['formatters_2eh_0',['formatters.h',['../engine_2scratchpads_2formatters_8h.html',1,'(Global Namespace)'],['../utils_2formatters_2formatters_8h.html',1,'(Global Namespace)']]]
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diff --git a/docs/html/search/files_6.js b/docs/html/search/files_6.js
index 318e1fca..22afc9f4 100644
--- a/docs/html/search/files_6.js
+++ b/docs/html/search/files_6.js
@@ -1,10 +1,13 @@
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-  ['gridfire_5fmod_2ef90_6',['gridfire_mod.f90',['../gridfire__mod_8f90.html',1,'']]]
+  ['gf_5fomp_2eh_1',['gf_omp.h',['../gf__omp_8h.html',1,'']]],
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+  ['gridfire_5fcontext_2ecpp_3',['gridfire_context.cpp',['../gridfire__context_8cpp.html',1,'']]],
+  ['gridfire_5fcontext_2eh_4',['gridfire_context.h',['../gridfire__context_8h.html',1,'']]],
+  ['gridfire_5fextern_2ecpp_5',['gridfire_extern.cpp',['../gridfire__extern_8cpp.html',1,'']]],
+  ['gridfire_5fextern_2eh_6',['gridfire_extern.h',['../gridfire__extern_8h.html',1,'']]],
+  ['gridfire_5fmod_2ef90_7',['gridfire_mod.f90',['../gridfire__mod_8f90.html',1,'']]],
+  ['gridsolver_2ecpp_8',['GridSolver.cpp',['../_grid_solver_8cpp.html',1,'']]],
+  ['gridsolver_2eh_9',['GridSolver.h',['../_grid_solver_8h.html',1,'']]]
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diff --git a/docs/html/search/files_b.js b/docs/html/search/files_b.js
index f5e1c899..31c0a2ae 100644
--- a/docs/html/search/files_b.js
+++ b/docs/html/search/files_b.js
@@ -1,4 +1,7 @@
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+  ['macros_2eh_0',['macros.h',['../macros_8h.html',1,'']]],
+  ['mainpage_2emd_1',['mainpage.md',['../mainpage_8md.html',1,'']]],
+  ['mesa_2ecpp_2',['mesa.cpp',['../mesa_8cpp.html',1,'']]],
+  ['mesa_2eh_3',['mesa.h',['../mesa_8h.html',1,'']]]
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diff --git a/docs/html/search/files_d.js b/docs/html/search/files_d.js
index 8fc2770b..82ecd5f3 100644
--- a/docs/html/search/files_d.js
+++ b/docs/html/search/files_d.js
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-  ['python_2ecpp_27',['python.cpp',['../python_8cpp.html',1,'']]],
-  ['python_2eh_28',['python.h',['../python_8h.html',1,'']]]
+  ['pointsolver_2ecpp_9',['PointSolver.cpp',['../_point_solver_8cpp.html',1,'']]],
+  ['pointsolver_2eh_10',['PointSolver.h',['../_point_solver_8h.html',1,'']]],
+  ['policy_2eh_11',['policy.h',['../policy_8h.html',1,'']]],
+  ['policy_5fabstract_2eh_12',['policy_abstract.h',['../policy__abstract_8h.html',1,'']]],
+  ['policy_5flogical_2ecpp_13',['policy_logical.cpp',['../policy__logical_8cpp.html',1,'']]],
+  ['policy_5flogical_2eh_14',['policy_logical.h',['../policy__logical_8h.html',1,'']]],
+  ['priming_2ecpp_15',['priming.cpp',['../priming_8cpp.html',1,'']]],
+  ['priming_2eh_16',['priming.h',['../priming_8h.html',1,'']]],
+  ['py_5fengine_2ecpp_17',['py_engine.cpp',['../py__engine_8cpp.html',1,'']]],
+  ['py_5fengine_2eh_18',['py_engine.h',['../py__engine_8h.html',1,'']]],
+  ['py_5fio_2ecpp_19',['py_io.cpp',['../py__io_8cpp.html',1,'']]],
+  ['py_5fio_2eh_20',['py_io.h',['../py__io_8h.html',1,'']]],
+  ['py_5fpartition_2ecpp_21',['py_partition.cpp',['../py__partition_8cpp.html',1,'']]],
+  ['py_5fpartition_2eh_22',['py_partition.h',['../py__partition_8h.html',1,'']]],
+  ['py_5fpolicy_2ecpp_23',['py_policy.cpp',['../py__policy_8cpp.html',1,'']]],
+  ['py_5fpolicy_2eh_24',['py_policy.h',['../py__policy_8h.html',1,'']]],
+  ['py_5fscreening_2ecpp_25',['py_screening.cpp',['../py__screening_8cpp.html',1,'']]],
+  ['py_5fscreening_2eh_26',['py_screening.h',['../py__screening_8h.html',1,'']]],
+  ['py_5fsolver_2ecpp_27',['py_solver.cpp',['../py__solver_8cpp.html',1,'']]],
+  ['py_5fsolver_2eh_28',['py_solver.h',['../py__solver_8h.html',1,'']]],
+  ['python_2ecpp_29',['python.cpp',['../python_8cpp.html',1,'']]],
+  ['python_2eh_30',['python.h',['../python_8h.html',1,'']]]
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diff --git a/docs/html/search/files_f.js b/docs/html/search/files_f.js
index 76aeaf10..eb7262e5 100644
--- a/docs/html/search/files_f.js
+++ b/docs/html/search/files_f.js
@@ -1,19 +1,21 @@
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+  ['gridfire_3a_3apartition_10',['partition',['../namespacegridfire_1_1partition.html',1,'gridfire']]],
+  ['gridfire_3a_3apartition_3a_3arecord_11',['record',['../namespacegridfire_1_1partition_1_1record.html',1,'gridfire::partition']]],
+  ['gridfire_3a_3apolicy_12',['policy',['../namespacegridfire_1_1policy.html',1,'gridfire']]],
+  ['gridfire_3a_3arates_13',['rates',['../namespacegridfire_1_1rates.html',1,'gridfire']]],
+  ['gridfire_3a_3arates_3a_3aweak_14',['weak',['../namespacegridfire_1_1rates_1_1weak.html',1,'gridfire::rates']]],
+  ['gridfire_3a_3areaclib_15',['reaclib',['../namespacegridfire_1_1reaclib.html',1,'gridfire']]],
+  ['gridfire_3a_3areaction_16',['reaction',['../namespacegridfire_1_1reaction.html',1,'gridfire']]],
+  ['gridfire_3a_3ascreening_17',['screening',['../namespacegridfire_1_1screening.html',1,'gridfire']]],
+  ['gridfire_3a_3asolver_18',['solver',['../namespacegridfire_1_1solver.html',1,'gridfire']]],
+  ['gridfire_3a_3atrigger_19',['trigger',['../namespacegridfire_1_1trigger.html',1,'gridfire']]],
+  ['gridfire_3a_3atrigger_3a_3asolver_20',['solver',['../namespacegridfire_1_1trigger_1_1solver.html',1,'gridfire::trigger']]],
+  ['gridfire_3a_3atrigger_3a_3asolver_3a_3acvode_21',['CVODE',['../namespacegridfire_1_1trigger_1_1solver_1_1_c_v_o_d_e.html',1,'gridfire::trigger::solver']]],
+  ['gridfire_3a_3autils_22',['utils',['../namespacegridfire_1_1utils.html',1,'gridfire']]],
+  ['gridfire_3a_3autils_3a_3ahashing_23',['hashing',['../namespacegridfire_1_1utils_1_1hashing.html',1,'gridfire::utils']]],
+  ['gridfire_3a_3autils_3a_3ahashing_3a_3areaction_24',['reaction',['../namespacegridfire_1_1utils_1_1hashing_1_1reaction.html',1,'gridfire::utils::hashing']]],
+  ['gridfire_5fmod_25',['gridfire_mod',['../namespacegridfire__mod.html',1,'']]]
 ];
diff --git a/docs/html/search/pages_0.js b/docs/html/search/pages_0.js
index 4d858458..94387043 100644
--- a/docs/html/search/pages_0.js
+++ b/docs/html/search/pages_0.js
@@ -1,4 +1,6 @@
 var searchData=
 [
-  ['deprecated_20list_0',['Deprecated List',['../deprecated.html',1,'']]]
+  ['gridfire_0',['GridFire',['../index.html',1,'']]],
+  ['gridfire_20python_20usage_20guide_1',['GridFire Python Usage Guide',['../md_docs_2static_2usage.html',1,'']]],
+  ['guide_2',['GridFire Python Usage Guide',['../md_docs_2static_2usage.html',1,'']]]
 ];
diff --git a/docs/html/search/pages_1.js b/docs/html/search/pages_1.js
index 94387043..0f6b7f54 100644
--- a/docs/html/search/pages_1.js
+++ b/docs/html/search/pages_1.js
@@ -1,6 +1,4 @@
 var searchData=
 [
-  ['gridfire_0',['GridFire',['../index.html',1,'']]],
-  ['gridfire_20python_20usage_20guide_1',['GridFire Python Usage Guide',['../md_docs_2static_2usage.html',1,'']]],
-  ['guide_2',['GridFire Python Usage Guide',['../md_docs_2static_2usage.html',1,'']]]
+  ['python_20usage_20guide_0',['GridFire Python Usage Guide',['../md_docs_2static_2usage.html',1,'']]]
 ];
diff --git a/docs/html/search/pages_2.js b/docs/html/search/pages_2.js
index 1ad91e39..d99957c4 100644
--- a/docs/html/search/pages_2.js
+++ b/docs/html/search/pages_2.js
@@ -1,4 +1,4 @@
 var searchData=
 [
-  ['list_0',['Deprecated List',['../deprecated.html',1,'']]]
+  ['usage_20guide_0',['GridFire Python Usage Guide',['../md_docs_2static_2usage.html',1,'']]]
 ];
diff --git a/docs/html/search/related_0.js b/docs/html/search/related_0.js
index c684601b..c51a0d80 100644
--- a/docs/html/search/related_0.js
+++ b/docs/html/search/related_0.js
@@ -1,4 +1,4 @@
 var searchData=
 [
-  ['operator_3c_3c_0',['operator&lt;&lt;',['../structgridfire_1_1engine_1_1EnergyDerivatives.html#aa974abdff7fe09c9aea3fcf4ae13b652',1,'gridfire::engine::EnergyDerivatives::operator&lt;&lt;'],['../structgridfire_1_1engine_1_1PrimingReport.html#ac6c3112c984203fd5a672006be421736',1,'gridfire::engine::PrimingReport::operator&lt;&lt;'],['../structgridfire_1_1engine_1_1MultiscalePartitioningEngineView_1_1QSEGroup.html#a37b41341696a780dbeee850919a56bf2',1,'gridfire::engine::MultiscalePartitioningEngineView::QSEGroup::operator&lt;&lt;'],['../classgridfire_1_1policy_1_1ReactionChainPolicy.html#a264e0d1d13c7d4d5f05bdda5d5ada5c0',1,'gridfire::policy::ReactionChainPolicy::operator&lt;&lt;'],['../structgridfire_1_1reaction_1_1RateCoefficientSet.html#a31a92f95a27e4430209dfc2bdfa5c40f',1,'gridfire::reaction::RateCoefficientSet::operator&lt;&lt;'],['../classgridfire_1_1reaction_1_1Reaction.html#a2b05ab608187216fc751bd2e42e8b7d8',1,'gridfire::reaction::Reaction::operator&lt;&lt;'],['../classgridfire_1_1reaction_1_1ReaclibReaction.html#ae24ad1e38daab536aec6ac72c67e8615',1,'gridfire::reaction::ReaclibReaction::operator&lt;&lt;'],['../classgridfire_1_1reaction_1_1LogicalReaclibReaction.html#a495ca800cc1dd224ce2a821a825afafd',1,'gridfire::reaction::LogicalReaclibReaction::operator&lt;&lt;'],['../classgridfire_1_1reaction_1_1ReactionSet.html#a5a5e6ed364794f872c2c819536e24c20',1,'gridfire::reaction::ReactionSet::operator&lt;&lt;'],['../structgridfire_1_1rates_1_1weak_1_1WeakReactionEntry.html#a5a2525ca7e7b2c812b1f67b3b0114aaf',1,'gridfire::rates::weak::WeakReactionEntry::operator&lt;&lt;'],['../structgridfire_1_1NetOut.html#a6996f06951c2a873e5464773ddc7319b',1,'gridfire::NetOut::operator&lt;&lt;']]]
+  ['operator_3c_3c_0',['operator&lt;&lt;',['../structgridfire_1_1engine_1_1_energy_derivatives.html#aa974abdff7fe09c9aea3fcf4ae13b652',1,'gridfire::engine::EnergyDerivatives::operator&lt;&lt;()'],['../structgridfire_1_1engine_1_1_priming_report.html#ac6c3112c984203fd5a672006be421736',1,'gridfire::engine::PrimingReport::operator&lt;&lt;()'],['../structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html#a37b41341696a780dbeee850919a56bf2',1,'gridfire::engine::MultiscalePartitioningEngineView::QSEGroup::operator&lt;&lt;()'],['../classgridfire_1_1policy_1_1_reaction_chain_policy.html#a264e0d1d13c7d4d5f05bdda5d5ada5c0',1,'gridfire::policy::ReactionChainPolicy::operator&lt;&lt;()'],['../structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a31a92f95a27e4430209dfc2bdfa5c40f',1,'gridfire::reaction::RateCoefficientSet::operator&lt;&lt;()'],['../classgridfire_1_1reaction_1_1_reaction.html#a2b05ab608187216fc751bd2e42e8b7d8',1,'gridfire::reaction::Reaction::operator&lt;&lt;()'],['../classgridfire_1_1reaction_1_1_reaclib_reaction.html#ae24ad1e38daab536aec6ac72c67e8615',1,'gridfire::reaction::ReaclibReaction::operator&lt;&lt;()'],['../classgridfire_1_1reaction_1_1_logical_reaclib_reaction.html#a495ca800cc1dd224ce2a821a825afafd',1,'gridfire::reaction::LogicalReaclibReaction::operator&lt;&lt;()'],['../classgridfire_1_1reaction_1_1_reaction_set.html#a5a5e6ed364794f872c2c819536e24c20',1,'gridfire::reaction::ReactionSet::operator&lt;&lt;()'],['../structgridfire_1_1rates_1_1weak_1_1_weak_reaction_entry.html#a5a2525ca7e7b2c812b1f67b3b0114aaf',1,'gridfire::rates::weak::WeakReactionEntry::operator&lt;&lt;()'],['../structgridfire_1_1_net_out.html#a6996f06951c2a873e5464773ddc7319b',1,'gridfire::NetOut::operator&lt;&lt;()'],['../classgridfire_1_1engine_1_1_reaction_set.html#a5a5e6ed364794f872c2c819536e24c20',1,'gridfire::engine::ReactionSet::operator&lt;&lt;()'],['../classgridfire_1_1engine_1_1_reaction.html#a2b05ab608187216fc751bd2e42e8b7d8',1,'gridfire::engine::Reaction::operator&lt;&lt;()']]]
 ];
diff --git a/docs/html/search/search.js b/docs/html/search/search.js
index 6fd40c67..666af01e 100644
--- a/docs/html/search/search.js
+++ b/docs/html/search/search.js
@@ -22,58 +22,9 @@
 
  @licend  The above is the entire license notice for the JavaScript code in this file
  */
-function convertToId(search)
-{
-  var result = '';
-  for (i=0;i<search.length;i++)
-  {
-    var c = search.charAt(i);
-    var cn = c.charCodeAt(0);
-    if (c.match(/[a-z0-9\u0080-\uFFFF]/))
-    {
-      result+=c;
-    }
-    else if (cn<16)
-    {
-      result+="_0"+cn.toString(16);
-    }
-    else
-    {
-      result+="_"+cn.toString(16);
-    }
-  }
-  return result;
-}
+const SEARCH_COOKIE_NAME = ''+'search_grp';
 
-function getXPos(item)
-{
-  var x = 0;
-  if (item.offsetWidth)
-  {
-    while (item && item!=document.body)
-    {
-      x   += item.offsetLeft;
-      item = item.offsetParent;
-    }
-  }
-  return x;
-}
-
-function getYPos(item)
-{
-  var y = 0;
-  if (item.offsetWidth)
-  {
-     while (item && item!=document.body)
-     {
-       y   += item.offsetTop;
-       item = item.offsetParent;
-     }
-  }
-  return y;
-}
-
-var searchResults = new SearchResults("searchResults");
+const searchResults = new SearchResults();
 
 /* A class handling everything associated with the search panel.
 
@@ -82,11 +33,32 @@ var searchResults = new SearchResults("searchResults");
           storing this instance.  Is needed to be able to set timeouts.
    resultPath - path to use for external files
 */
-function SearchBox(name, resultsPath, extension)
-{
+function SearchBox(name, resultsPath, extension) {
   if (!name || !resultsPath) {  alert("Missing parameters to SearchBox."); }
   if (!extension || extension == "") { extension = ".html"; }
 
+  function getXPos(item) {
+    let x = 0;
+    if (item.offsetWidth) {
+      while (item && item!=document.body) {
+        x   += item.offsetLeft;
+        item = item.offsetParent;
+      }
+    }
+    return x;
+  }
+
+  function getYPos(item) {
+    let y = 0;
+    if (item.offsetWidth) {
+      while (item && item!=document.body) {
+        y   += item.offsetTop;
+        item = item.offsetParent;
+      }
+    }
+    return y;
+  }
+
   // ---------- Instance variables
   this.name                  = name;
   this.resultsPath           = resultsPath;
@@ -102,43 +74,27 @@ function SearchBox(name, resultsPath, extension)
 
   // ----------- DOM Elements
 
-  this.DOMSearchField = function()
-  {  return document.getElementById("MSearchField");  }
-
-  this.DOMSearchSelect = function()
-  {  return document.getElementById("MSearchSelect");  }
-
-  this.DOMSearchSelectWindow = function()
-  {  return document.getElementById("MSearchSelectWindow");  }
-
-  this.DOMPopupSearchResults = function()
-  {  return document.getElementById("MSearchResults");  }
-
-  this.DOMPopupSearchResultsWindow = function()
-  {  return document.getElementById("MSearchResultsWindow");  }
-
-  this.DOMSearchClose = function()
-  {  return document.getElementById("MSearchClose"); }
-
-  this.DOMSearchBox = function()
-  {  return document.getElementById("MSearchBox");  }
+  this.DOMSearchField              = () => document.getElementById("MSearchField");
+  this.DOMSearchSelect             = () => document.getElementById("MSearchSelect");
+  this.DOMSearchSelectWindow       = () => document.getElementById("MSearchSelectWindow");
+  this.DOMPopupSearchResults       = () => document.getElementById("MSearchResults");
+  this.DOMPopupSearchResultsWindow = () => document.getElementById("MSearchResultsWindow");
+  this.DOMSearchClose              = () => document.getElementById("MSearchClose");
+  this.DOMSearchBox                = () => document.getElementById("MSearchBox");
 
   // ------------ Event Handlers
 
   // Called when focus is added or removed from the search field.
-  this.OnSearchFieldFocus = function(isActive)
-  {
+  this.OnSearchFieldFocus = function(isActive) {
     this.Activate(isActive);
   }
 
-  this.OnSearchSelectShow = function()
-  {
-    var searchSelectWindow = this.DOMSearchSelectWindow();
-    var searchField        = this.DOMSearchSelect();
+  this.OnSearchSelectShow = function() {
+    const searchSelectWindow = this.DOMSearchSelectWindow();
+    const searchField        = this.DOMSearchSelect();
 
-    var left = getXPos(searchField);
-    var top  = getYPos(searchField);
-    top += searchField.offsetHeight;
+    const left = getXPos(searchField);
+    const top  = getYPos(searchField) + searchField.offsetHeight;
 
     // show search selection popup
     searchSelectWindow.style.display='block';
@@ -146,55 +102,43 @@ function SearchBox(name, resultsPath, extension)
     searchSelectWindow.style.top  =  top  + 'px';
 
     // stop selection hide timer
-    if (this.hideTimeout)
-    {
+    if (this.hideTimeout) {
       clearTimeout(this.hideTimeout);
       this.hideTimeout=0;
     }
     return false; // to avoid "image drag" default event
   }
 
-  this.OnSearchSelectHide = function()
-  {
+  this.OnSearchSelectHide = function() {
     this.hideTimeout = setTimeout(this.CloseSelectionWindow.bind(this),
                                   this.closeSelectionTimeout);
   }
 
   // Called when the content of the search field is changed.
-  this.OnSearchFieldChange = function(evt)
-  {
-    if (this.keyTimeout) // kill running timer
-    {
+  this.OnSearchFieldChange = function(evt) {
+    if (this.keyTimeout) { // kill running timer
       clearTimeout(this.keyTimeout);
       this.keyTimeout = 0;
     }
 
-    var e  = (evt) ? evt : window.event; // for IE
-    if (e.keyCode==40 || e.keyCode==13)
-    {
-      if (e.shiftKey==1)
-      {
+    const e = evt ? evt : window.event; // for IE
+    if (e.keyCode==40 || e.keyCode==13) {
+      if (e.shiftKey==1) {
         this.OnSearchSelectShow();
-        var win=this.DOMSearchSelectWindow();
-        for (i=0;i<win.childNodes.length;i++)
-        {
-          var child = win.childNodes[i]; // get span within a
-          if (child.className=='SelectItem')
-          {
+        const win=this.DOMSearchSelectWindow();
+        for (let i=0;i<win.childNodes.length;i++) {
+          const child = win.childNodes[i]; // get span within a
+          if (child.className=='SelectItem') {
             child.focus();
             return;
           }
         }
         return;
-      }
-      else
-      {
-        var elem = searchResults.NavNext(0);
+      } else {
+        const elem = searchResults.NavNext(0);
         if (elem) elem.focus();
       }
-    }
-    else if (e.keyCode==27) // Escape out of the search field
-    {
+    } else if (e.keyCode==27) { // Escape out of the search field
       e.stopPropagation();
       this.DOMSearchField().blur();
       this.DOMPopupSearchResultsWindow().style.display = 'none';
@@ -205,18 +149,13 @@ function SearchBox(name, resultsPath, extension)
     }
 
     // strip whitespaces
-    var searchValue = this.DOMSearchField().value.replace(/ +/g, "");
+    const searchValue = this.DOMSearchField().value.replace(/ +/g, "");
 
-    if (searchValue != this.lastSearchValue) // search value has changed
-    {
-      if (searchValue != "") // non-empty search
-      {
+    if (searchValue != this.lastSearchValue) { // search value has changed
+      if (searchValue != "") { // non-empty search
         // set timer for search update
-        this.keyTimeout = setTimeout(this.Search.bind(this),
-                                     this.keyTimeoutLength);
-      }
-      else // empty search field
-      {
+        this.keyTimeout = setTimeout(this.Search.bind(this), this.keyTimeoutLength);
+      } else { // empty search field
         this.DOMPopupSearchResultsWindow().style.display = 'none';
         this.DOMSearchClose().style.display = 'none';
         this.lastSearchValue = '';
@@ -224,37 +163,44 @@ function SearchBox(name, resultsPath, extension)
     }
   }
 
-  this.SelectItemCount = function(id)
-  {
-    var count=0;
-    var win=this.DOMSearchSelectWindow();
-    for (i=0;i<win.childNodes.length;i++)
-    {
-      var child = win.childNodes[i]; // get span within a
-      if (child.className=='SelectItem')
-      {
+  this.SelectItemCount = function() {
+    let count=0;
+    const win=this.DOMSearchSelectWindow();
+    for (let i=0;i<win.childNodes.length;i++) {
+      const child = win.childNodes[i]; // get span within a
+      if (child.className=='SelectItem') {
         count++;
       }
     }
     return count;
   }
 
-  this.SelectItemSet = function(id)
-  {
-    var i,j=0;
-    var win=this.DOMSearchSelectWindow();
-    for (i=0;i<win.childNodes.length;i++)
-    {
-      var child = win.childNodes[i]; // get span within a
-      if (child.className=='SelectItem')
-      {
-        var node = child.firstChild;
-        if (j==id)
-        {
-          node.innerHTML='&#8226;';
+  this.GetSelectionIdByName = function(name) {
+    let j=0;
+    const win=this.DOMSearchSelectWindow();
+    for (let i=0;i<win.childNodes.length;i++) {
+      const child = win.childNodes[i];
+      if (child.className=='SelectItem') {
+        if (child.childNodes[1].nodeValue==name) {
+          return j;
         }
-        else
-        {
+        j++;
+      }
+    }
+    return 0;
+  }
+
+  this.SelectItemSet = function(id) {
+    let j=0;
+    const win=this.DOMSearchSelectWindow();
+    for (let i=0;i<win.childNodes.length;i++) {
+      const child = win.childNodes[i]; // get span within a
+      if (child.className=='SelectItem') {
+        const node = child.firstChild;
+        if (j==id) {
+          node.innerHTML='&#8226;';
+          Cookie.writeSetting(SEARCH_COOKIE_NAME, child.childNodes[1].nodeValue, 0)
+        } else {
           node.innerHTML='&#160;';
         }
         j++;
@@ -264,32 +210,24 @@ function SearchBox(name, resultsPath, extension)
 
   // Called when an search filter selection is made.
   // set item with index id as the active item
-  this.OnSelectItem = function(id)
-  {
+  this.OnSelectItem = function(id) {
     this.searchIndex = id;
     this.SelectItemSet(id);
-    var searchValue = this.DOMSearchField().value.replace(/ +/g, "");
-    if (searchValue!="" && this.searchActive) // something was found -> do a search
-    {
+    const searchValue = this.DOMSearchField().value.replace(/ +/g, "");
+    if (searchValue!="" && this.searchActive) { // something was found -> do a search
       this.Search();
     }
   }
 
-  this.OnSearchSelectKey = function(evt)
-  {
-    var e = (evt) ? evt : window.event; // for IE
-    if (e.keyCode==40 && this.searchIndex<this.SelectItemCount()) // Down
-    {
+  this.OnSearchSelectKey = function(evt) {
+    const e = (evt) ? evt : window.event; // for IE
+    if (e.keyCode==40 && this.searchIndex<this.SelectItemCount()) { // Down
       this.searchIndex++;
       this.OnSelectItem(this.searchIndex);
-    }
-    else if (e.keyCode==38 && this.searchIndex>0) // Up
-    {
+    } else if (e.keyCode==38 && this.searchIndex>0) { // Up
       this.searchIndex--;
       this.OnSelectItem(this.searchIndex);
-    }
-    else if (e.keyCode==13 || e.keyCode==27)
-    {
+    } else if (e.keyCode==13 || e.keyCode==27) {
       e.stopPropagation();
       this.OnSelectItem(this.searchIndex);
       this.CloseSelectionWindow();
@@ -301,82 +239,75 @@ function SearchBox(name, resultsPath, extension)
   // --------- Actions
 
   // Closes the results window.
-  this.CloseResultsWindow = function()
-  {
+  this.CloseResultsWindow = function() {
     this.DOMPopupSearchResultsWindow().style.display = 'none';
     this.DOMSearchClose().style.display = 'none';
     this.Activate(false);
   }
 
-  this.CloseSelectionWindow = function()
-  {
+  this.CloseSelectionWindow = function() {
     this.DOMSearchSelectWindow().style.display = 'none';
   }
 
   // Performs a search.
-  this.Search = function()
-  {
+  this.Search = function() {
     this.keyTimeout = 0;
 
     // strip leading whitespace
-    var searchValue = this.DOMSearchField().value.replace(/^ +/, "");
+    const searchValue = this.DOMSearchField().value.replace(/^ +/, "");
 
-    var code = searchValue.toLowerCase().charCodeAt(0);
-    var idxChar = searchValue.substr(0, 1).toLowerCase();
-    if ( 0xD800 <= code && code <= 0xDBFF && searchValue > 1) // surrogate pair
-    {
+    const code = searchValue.toLowerCase().charCodeAt(0);
+    let idxChar = searchValue.substr(0, 1).toLowerCase();
+    if ( 0xD800 <= code && code <= 0xDBFF && searchValue > 1) { // surrogate pair
       idxChar = searchValue.substr(0, 2);
     }
 
-    var jsFile;
-
-    var idx = indexSectionsWithContent[this.searchIndex].indexOf(idxChar);
-    if (idx!=-1)
-    {
-       var hexCode=idx.toString(16);
-       jsFile = this.resultsPath + indexSectionNames[this.searchIndex] + '_' + hexCode + '.js';
+    let jsFile;
+    let idx = indexSectionsWithContent[this.searchIndex].indexOf(idxChar);
+    if (idx!=-1) {
+      const hexCode=idx.toString(16);
+      jsFile = this.resultsPath + indexSectionNames[this.searchIndex] + '_' + hexCode + '.js';
     }
 
-    var loadJS = function(url, impl, loc){
-      var scriptTag = document.createElement('script');
+    const loadJS = function(url, impl, loc) {
+      const scriptTag = document.createElement('script');
       scriptTag.src = url;
       scriptTag.onload = impl;
       scriptTag.onreadystatechange = impl;
       loc.appendChild(scriptTag);
     }
 
-    var domPopupSearchResultsWindow = this.DOMPopupSearchResultsWindow();
-    var domSearchBox = this.DOMSearchBox();
-    var domPopupSearchResults = this.DOMPopupSearchResults();
-    var domSearchClose = this.DOMSearchClose();
-    var resultsPath = this.resultsPath;
+    const domPopupSearchResultsWindow = this.DOMPopupSearchResultsWindow();
+    const domSearchBox = this.DOMSearchBox();
+    const domPopupSearchResults = this.DOMPopupSearchResults();
+    const domSearchClose = this.DOMSearchClose();
+    const resultsPath = this.resultsPath;
 
-    var handleResults = function() {
+    const handleResults = function() {
       document.getElementById("Loading").style.display="none";
       if (typeof searchData !== 'undefined') {
         createResults(resultsPath);
         document.getElementById("NoMatches").style.display="none";
       }
- 
+
       if (idx!=-1) {
         searchResults.Search(searchValue);
       } else { // no file with search results => force empty search results
         searchResults.Search('====');
       }
 
-      if (domPopupSearchResultsWindow.style.display!='block')
-      {
+      if (domPopupSearchResultsWindow.style.display!='block') {
         domSearchClose.style.display = 'inline-block';
-        var left = getXPos(domSearchBox) + 150;
-        var top  = getYPos(domSearchBox) + 20;
+        let left = getXPos(domSearchBox) + 150;
+        let top  = getYPos(domSearchBox) + 20;
         domPopupSearchResultsWindow.style.display = 'block';
         left -= domPopupSearchResults.offsetWidth;
-        var maxWidth  = document.body.clientWidth;
-        var maxHeight = document.body.clientHeight;
-        var width = 300;
+        const maxWidth  = document.body.clientWidth;
+        const maxHeight = document.body.clientHeight;
+        let width = 300;
         if (left<10) left=10;
         if (width+left+8>maxWidth) width=maxWidth-left-8;
-        var height = 400;
+        let height = 400;
         if (height+top+8>maxHeight) height=maxHeight-top-8;
         domPopupSearchResultsWindow.style.top     = top  + 'px';
         domPopupSearchResultsWindow.style.left    = left + 'px';
@@ -398,17 +329,13 @@ function SearchBox(name, resultsPath, extension)
 
   // Activates or deactivates the search panel, resetting things to
   // their default values if necessary.
-  this.Activate = function(isActive)
-  {
+  this.Activate = function(isActive) {
     if (isActive || // open it
-        this.DOMPopupSearchResultsWindow().style.display == 'block'
-       )
-    {
+      this.DOMPopupSearchResultsWindow().style.display == 'block'
+    ) {
       this.DOMSearchBox().className = 'MSearchBoxActive';
       this.searchActive = true;
-    }
-    else if (!isActive) // directly remove the panel
-    {
+    } else if (!isActive) { // directly remove the panel
       this.DOMSearchBox().className = 'MSearchBoxInactive';
       this.searchActive             = false;
       this.lastSearchValue          = ''
@@ -421,409 +348,333 @@ function SearchBox(name, resultsPath, extension)
 // -----------------------------------------------------------------------
 
 // The class that handles everything on the search results page.
-function SearchResults(name)
-{
-    // The number of matches from the last run of <Search()>.
-    this.lastMatchCount = 0;
-    this.lastKey = 0;
-    this.repeatOn = false;
+function SearchResults() {
 
-    // Toggles the visibility of the passed element ID.
-    this.FindChildElement = function(id)
-    {
-      var parentElement = document.getElementById(id);
-      var element = parentElement.firstChild;
+  function convertToId(search) {
+    let result = '';
+    for (let i=0;i<search.length;i++) {
+      const c = search.charAt(i);
+      const cn = c.charCodeAt(0);
+      if (c.match(/[a-z0-9\u0080-\uFFFF]/)) {
+        result+=c;
+      } else if (cn<16) {
+        result+="_0"+cn.toString(16);
+      } else {
+        result+="_"+cn.toString(16);
+      }
+    }
+    return result;
+  }
 
-      while (element && element!=parentElement)
-      {
-        if (element.nodeName.toLowerCase() == 'div' && element.className == 'SRChildren')
-        {
-          return element;
+  // The number of matches from the last run of <Search()>.
+  this.lastMatchCount = 0;
+  this.lastKey = 0;
+  this.repeatOn = false;
+
+  // Toggles the visibility of the passed element ID.
+  this.FindChildElement = function(id) {
+    const parentElement = document.getElementById(id);
+    let element = parentElement.firstChild;
+
+    while (element && element!=parentElement) {
+      if (element.nodeName.toLowerCase() == 'div' && element.className == 'SRChildren') {
+        return element;
+      }
+
+      if (element.nodeName.toLowerCase() == 'div' && element.hasChildNodes()) {
+        element = element.firstChild;
+      } else if (element.nextSibling) {
+        element = element.nextSibling;
+      } else {
+        do {
+          element = element.parentNode;
         }
+        while (element && element!=parentElement && !element.nextSibling);
 
-        if (element.nodeName.toLowerCase() == 'div' && element.hasChildNodes())
-        {
-           element = element.firstChild;
-        }
-        else if (element.nextSibling)
-        {
-           element = element.nextSibling;
-        }
-        else
-        {
-          do
-          {
-            element = element.parentNode;
-          }
-          while (element && element!=parentElement && !element.nextSibling);
-
-          if (element && element!=parentElement)
-          {
-            element = element.nextSibling;
-          }
+        if (element && element!=parentElement) {
+          element = element.nextSibling;
         }
       }
     }
+  }
 
-    this.Toggle = function(id)
-    {
-      var element = this.FindChildElement(id);
-      if (element)
-      {
-        if (element.style.display == 'block')
-        {
-          element.style.display = 'none';
-        }
-        else
-        {
-          element.style.display = 'block';
-        }
+  this.Toggle = function(id) {
+    const element = this.FindChildElement(id);
+    if (element) {
+      if (element.style.display == 'block') {
+        element.style.display = 'none';
+      } else {
+        element.style.display = 'block';
       }
     }
+  }
 
-    // Searches for the passed string.  If there is no parameter,
-    // it takes it from the URL query.
-    //
-    // Always returns true, since other documents may try to call it
-    // and that may or may not be possible.
-    this.Search = function(search)
-    {
-      if (!search) // get search word from URL
-      {
-        search = window.location.search;
-        search = search.substring(1);  // Remove the leading '?'
-        search = unescape(search);
+  // Searches for the passed string.  If there is no parameter,
+  // it takes it from the URL query.
+  //
+  // Always returns true, since other documents may try to call it
+  // and that may or may not be possible.
+  this.Search = function(search) {
+    if (!search) { // get search word from URL
+      search = window.location.search;
+      search = search.substring(1);  // Remove the leading '?'
+      search = unescape(search);
+    }
+
+    search = search.replace(/^ +/, ""); // strip leading spaces
+    search = search.replace(/ +$/, ""); // strip trailing spaces
+    search = search.toLowerCase();
+    search = convertToId(search);
+
+    const resultRows = document.getElementsByTagName("div");
+    let matches = 0;
+
+    let i = 0;
+    while (i < resultRows.length) {
+      const row = resultRows.item(i);
+      if (row.className == "SRResult") {
+        let rowMatchName = row.id.toLowerCase();
+        rowMatchName = rowMatchName.replace(/^sr\d*_/, ''); // strip 'sr123_'
+
+        if (search.length<=rowMatchName.length &&
+          rowMatchName.substr(0, search.length)==search) {
+          row.style.display = 'block';
+          matches++;
+        } else {
+          row.style.display = 'none';
+        }
       }
+      i++;
+    }
+    document.getElementById("Searching").style.display='none';
+    if (matches == 0) { // no results
+      document.getElementById("NoMatches").style.display='block';
+    } else { // at least one result
+      document.getElementById("NoMatches").style.display='none';
+    }
+    this.lastMatchCount = matches;
+    return true;
+  }
 
-      search = search.replace(/^ +/, ""); // strip leading spaces
-      search = search.replace(/ +$/, ""); // strip trailing spaces
-      search = search.toLowerCase();
-      search = convertToId(search);
+  // return the first item with index index or higher that is visible
+  this.NavNext = function(index) {
+    let focusItem;
+    for (;;) {
+      const focusName = 'Item'+index;
+      focusItem = document.getElementById(focusName);
+      if (focusItem && focusItem.parentNode.parentNode.style.display=='block') {
+        break;
+      } else if (!focusItem) { // last element
+        break;
+      }
+      focusItem=null;
+      index++;
+    }
+    return focusItem;
+  }
 
-      var resultRows = document.getElementsByTagName("div");
-      var matches = 0;
+  this.NavPrev = function(index) {
+    let focusItem;
+    for (;;) {
+      const focusName = 'Item'+index;
+      focusItem = document.getElementById(focusName);
+      if (focusItem && focusItem.parentNode.parentNode.style.display=='block') {
+        break;
+      } else if (!focusItem) { // last element
+        break;
+      }
+      focusItem=null;
+      index--;
+    }
+    return focusItem;
+  }
 
-      var i = 0;
-      while (i < resultRows.length)
-      {
-        var row = resultRows.item(i);
-        if (row.className == "SRResult")
-        {
-          var rowMatchName = row.id.toLowerCase();
-          rowMatchName = rowMatchName.replace(/^sr\d*_/, ''); // strip 'sr123_'
+  this.ProcessKeys = function(e) {
+    if (e.type == "keydown") {
+      this.repeatOn = false;
+      this.lastKey = e.keyCode;
+    } else if (e.type == "keypress") {
+      if (!this.repeatOn) {
+        if (this.lastKey) this.repeatOn = true;
+        return false; // ignore first keypress after keydown
+      }
+    } else if (e.type == "keyup") {
+      this.lastKey = 0;
+      this.repeatOn = false;
+    }
+    return this.lastKey!=0;
+  }
 
-          if (search.length<=rowMatchName.length &&
-             rowMatchName.substr(0, search.length)==search)
-          {
-            row.style.display = 'block';
-            matches++;
-          }
-          else
-          {
-            row.style.display = 'none';
+  this.Nav = function(evt,itemIndex) {
+    const e  = (evt) ? evt : window.event; // for IE
+    if (e.keyCode==13) return true;
+    if (!this.ProcessKeys(e)) return false;
+
+    if (this.lastKey==38) { // Up
+      const newIndex = itemIndex-1;
+      let focusItem = this.NavPrev(newIndex);
+      if (focusItem) {
+        let child = this.FindChildElement(focusItem.parentNode.parentNode.id);
+        if (child && child.style.display == 'block') { // children visible
+          let n=0;
+          let tmpElem;
+          for (;;) { // search for last child
+            tmpElem = document.getElementById('Item'+newIndex+'_c'+n);
+            if (tmpElem) {
+              focusItem = tmpElem;
+            } else { // found it!
+              break;
+            }
+            n++;
           }
         }
-        i++;
       }
-      document.getElementById("Searching").style.display='none';
-      if (matches == 0) // no results
-      {
-        document.getElementById("NoMatches").style.display='block';
+      if (focusItem) {
+        focusItem.focus();
+      } else { // return focus to search field
+        document.getElementById("MSearchField").focus();
       }
-      else // at least one result
-      {
-        document.getElementById("NoMatches").style.display='none';
+    } else if (this.lastKey==40) { // Down
+      const newIndex = itemIndex+1;
+      let focusItem;
+      const item = document.getElementById('Item'+itemIndex);
+      const elem = this.FindChildElement(item.parentNode.parentNode.id);
+      if (elem && elem.style.display == 'block') { // children visible
+        focusItem = document.getElementById('Item'+itemIndex+'_c0');
       }
-      this.lastMatchCount = matches;
+      if (!focusItem) focusItem = this.NavNext(newIndex);
+      if (focusItem)  focusItem.focus();
+    } else if (this.lastKey==39) { // Right
+      const item = document.getElementById('Item'+itemIndex);
+      const elem = this.FindChildElement(item.parentNode.parentNode.id);
+      if (elem) elem.style.display = 'block';
+    } else if (this.lastKey==37) { // Left
+      const item = document.getElementById('Item'+itemIndex);
+      const elem = this.FindChildElement(item.parentNode.parentNode.id);
+      if (elem) elem.style.display = 'none';
+    } else if (this.lastKey==27) { // Escape
+      e.stopPropagation();
+      searchBox.CloseResultsWindow();
+      document.getElementById("MSearchField").focus();
+    } else if (this.lastKey==13) { // Enter
       return true;
     }
+    return false;
+  }
 
-    // return the first item with index index or higher that is visible
-    this.NavNext = function(index)
-    {
-      var focusItem;
-      while (1)
-      {
-        var focusName = 'Item'+index;
-        focusItem = document.getElementById(focusName);
-        if (focusItem && focusItem.parentNode.parentNode.style.display=='block')
-        {
-          break;
-        }
-        else if (!focusItem) // last element
-        {
-          break;
-        }
-        focusItem=null;
-        index++;
+  this.NavChild = function(evt,itemIndex,childIndex) {
+    const e  = (evt) ? evt : window.event; // for IE
+    if (e.keyCode==13) return true;
+    if (!this.ProcessKeys(e)) return false;
+
+    if (this.lastKey==38) { // Up
+      if (childIndex>0) {
+        const newIndex = childIndex-1;
+        document.getElementById('Item'+itemIndex+'_c'+newIndex).focus();
+      } else { // already at first child, jump to parent
+        document.getElementById('Item'+itemIndex).focus();
       }
-      return focusItem;
-    }
-
-    this.NavPrev = function(index)
-    {
-      var focusItem;
-      while (1)
-      {
-        var focusName = 'Item'+index;
-        focusItem = document.getElementById(focusName);
-        if (focusItem && focusItem.parentNode.parentNode.style.display=='block')
-        {
-          break;
-        }
-        else if (!focusItem) // last element
-        {
-          break;
-        }
-        focusItem=null;
-        index--;
-      }
-      return focusItem;
-    }
-
-    this.ProcessKeys = function(e)
-    {
-      if (e.type == "keydown")
-      {
-        this.repeatOn = false;
-        this.lastKey = e.keyCode;
-      }
-      else if (e.type == "keypress")
-      {
-        if (!this.repeatOn)
-        {
-          if (this.lastKey) this.repeatOn = true;
-          return false; // ignore first keypress after keydown
-        }
-      }
-      else if (e.type == "keyup")
-      {
-        this.lastKey = 0;
-        this.repeatOn = false;
-      }
-      return this.lastKey!=0;
-    }
-
-    this.Nav = function(evt,itemIndex)
-    {
-      var e  = (evt) ? evt : window.event; // for IE
-      if (e.keyCode==13) return true;
-      if (!this.ProcessKeys(e)) return false;
-
-      if (this.lastKey==38) // Up
-      {
-        var newIndex = itemIndex-1;
-        var focusItem = this.NavPrev(newIndex);
-        if (focusItem)
-        {
-          var child = this.FindChildElement(focusItem.parentNode.parentNode.id);
-          if (child && child.style.display == 'block') // children visible
-          {
-            var n=0;
-            var tmpElem;
-            while (1) // search for last child
-            {
-              tmpElem = document.getElementById('Item'+newIndex+'_c'+n);
-              if (tmpElem)
-              {
-                focusItem = tmpElem;
-              }
-              else // found it!
-              {
-                break;
-              }
-              n++;
-            }
-          }
-        }
-        if (focusItem)
-        {
-          focusItem.focus();
-        }
-        else // return focus to search field
-        {
-           document.getElementById("MSearchField").focus();
-        }
-      }
-      else if (this.lastKey==40) // Down
-      {
-        var newIndex = itemIndex+1;
-        var focusItem;
-        var item = document.getElementById('Item'+itemIndex);
-        var elem = this.FindChildElement(item.parentNode.parentNode.id);
-        if (elem && elem.style.display == 'block') // children visible
-        {
-          focusItem = document.getElementById('Item'+itemIndex+'_c0');
-        }
-        if (!focusItem) focusItem = this.NavNext(newIndex);
-        if (focusItem)  focusItem.focus();
-      }
-      else if (this.lastKey==39) // Right
-      {
-        var item = document.getElementById('Item'+itemIndex);
-        var elem = this.FindChildElement(item.parentNode.parentNode.id);
-        if (elem) elem.style.display = 'block';
-      }
-      else if (this.lastKey==37) // Left
-      {
-        var item = document.getElementById('Item'+itemIndex);
-        var elem = this.FindChildElement(item.parentNode.parentNode.id);
-        if (elem) elem.style.display = 'none';
-      }
-      else if (this.lastKey==27) // Escape
-      {
-        e.stopPropagation();
-        searchBox.CloseResultsWindow();
-        document.getElementById("MSearchField").focus();
-      }
-      else if (this.lastKey==13) // Enter
-      {
-        return true;
-      }
-      return false;
-    }
-
-    this.NavChild = function(evt,itemIndex,childIndex)
-    {
-      var e  = (evt) ? evt : window.event; // for IE
-      if (e.keyCode==13) return true;
-      if (!this.ProcessKeys(e)) return false;
-
-      if (this.lastKey==38) // Up
-      {
-        if (childIndex>0)
-        {
-          var newIndex = childIndex-1;
-          document.getElementById('Item'+itemIndex+'_c'+newIndex).focus();
-        }
-        else // already at first child, jump to parent
-        {
-          document.getElementById('Item'+itemIndex).focus();
-        }
-      }
-      else if (this.lastKey==40) // Down
-      {
-        var newIndex = childIndex+1;
-        var elem = document.getElementById('Item'+itemIndex+'_c'+newIndex);
-        if (!elem) // last child, jump to parent next parent
-        {
-          elem = this.NavNext(itemIndex+1);
-        }
-        if (elem)
-        {
-          elem.focus();
-        }
-      }
-      else if (this.lastKey==27) // Escape
-      {
-        e.stopPropagation();
-        searchBox.CloseResultsWindow();
-        document.getElementById("MSearchField").focus();
-      }
-      else if (this.lastKey==13) // Enter
-      {
-        return true;
-      }
-      return false;
+    } else if (this.lastKey==40) { // Down
+      const newIndex = childIndex+1;
+      let elem = document.getElementById('Item'+itemIndex+'_c'+newIndex);
+      if (!elem) { // last child, jump to parent next parent
+        elem = this.NavNext(itemIndex+1);
+      }
+      if (elem) {
+        elem.focus();
+      }
+    } else if (this.lastKey==27) { // Escape
+      e.stopPropagation();
+      searchBox.CloseResultsWindow();
+      document.getElementById("MSearchField").focus();
+    } else if (this.lastKey==13) { // Enter
+      return true;
     }
+    return false;
+  }
 }
 
-function setKeyActions(elem,action)
-{
-  elem.setAttribute('onkeydown',action);
-  elem.setAttribute('onkeypress',action);
-  elem.setAttribute('onkeyup',action);
-}
+function createResults(resultsPath) {
 
-function setClassAttr(elem,attr)
-{
-  elem.setAttribute('class',attr);
-  elem.setAttribute('className',attr);
-}
+  function setKeyActions(elem,action) {
+    elem.setAttribute('onkeydown',action);
+    elem.setAttribute('onkeypress',action);
+    elem.setAttribute('onkeyup',action);
+  }
 
-function createResults(resultsPath)
-{
-  var results = document.getElementById("SRResults");
+  function setClassAttr(elem,attr) {
+    elem.setAttribute('class',attr);
+    elem.setAttribute('className',attr);
+  }
+
+  const results = document.getElementById("SRResults");
   results.innerHTML = '';
-  for (var e=0; e<searchData.length; e++)
-  {
-    var id = searchData[e][0];
-    var srResult = document.createElement('div');
+  searchData.forEach((elem,index) => {
+    const id = elem[0];
+    const srResult = document.createElement('div');
     srResult.setAttribute('id','SR_'+id);
     setClassAttr(srResult,'SRResult');
-    var srEntry = document.createElement('div');
+    const srEntry = document.createElement('div');
     setClassAttr(srEntry,'SREntry');
-    var srLink = document.createElement('a');
-    srLink.setAttribute('id','Item'+e);
-    setKeyActions(srLink,'return searchResults.Nav(event,'+e+')');
+    const srLink = document.createElement('a');
+    srLink.setAttribute('id','Item'+index);
+    setKeyActions(srLink,'return searchResults.Nav(event,'+index+')');
     setClassAttr(srLink,'SRSymbol');
-    srLink.innerHTML = searchData[e][1][0];
+    srLink.innerHTML = elem[1][0];
     srEntry.appendChild(srLink);
-    if (searchData[e][1].length==2) // single result
-    {
-      srLink.setAttribute('href',resultsPath+searchData[e][1][1][0]);
+    if (elem[1].length==2) { // single result
+      srLink.setAttribute('href',resultsPath+elem[1][1][0]);
       srLink.setAttribute('onclick','searchBox.CloseResultsWindow()');
-      if (searchData[e][1][1][1])
-      {
+      if (elem[1][1][1]) {
        srLink.setAttribute('target','_parent');
-      }
-      else
-      {
+      } else {
        srLink.setAttribute('target','_blank');
       }
-      var srScope = document.createElement('span');
+      const srScope = document.createElement('span');
       setClassAttr(srScope,'SRScope');
-      srScope.innerHTML = searchData[e][1][1][2];
+      srScope.innerHTML = elem[1][1][2];
       srEntry.appendChild(srScope);
-    }
-    else // multiple results
-    {
+    } else { // multiple results
       srLink.setAttribute('href','javascript:searchResults.Toggle("SR_'+id+'")');
-      var srChildren = document.createElement('div');
+      const srChildren = document.createElement('div');
       setClassAttr(srChildren,'SRChildren');
-      for (var c=0; c<searchData[e][1].length-1; c++)
-      {
-        var srChild = document.createElement('a');
-        srChild.setAttribute('id','Item'+e+'_c'+c);
-        setKeyActions(srChild,'return searchResults.NavChild(event,'+e+','+c+')');
+      for (let c=0; c<elem[1].length-1; c++) {
+        const srChild = document.createElement('a');
+        srChild.setAttribute('id','Item'+index+'_c'+c);
+        setKeyActions(srChild,'return searchResults.NavChild(event,'+index+','+c+')');
         setClassAttr(srChild,'SRScope');
-        srChild.setAttribute('href',resultsPath+searchData[e][1][c+1][0]);
+        srChild.setAttribute('href',resultsPath+elem[1][c+1][0]);
         srChild.setAttribute('onclick','searchBox.CloseResultsWindow()');
-        if (searchData[e][1][c+1][1])
-        {
+        if (elem[1][c+1][1]) {
          srChild.setAttribute('target','_parent');
-        }
-        else
-        {
+        } else {
          srChild.setAttribute('target','_blank');
         }
-        srChild.innerHTML = searchData[e][1][c+1][2];
+        srChild.innerHTML = elem[1][c+1][2];
         srChildren.appendChild(srChild);
       }
       srEntry.appendChild(srChildren);
     }
     srResult.appendChild(srEntry);
     results.appendChild(srResult);
-  }
+  });
 }
 
-function init_search()
-{
-  var results = document.getElementById("MSearchSelectWindow");
+function init_search() {
+  const results = document.getElementById("MSearchSelectWindow");
+
   results.tabIndex=0;
-  for (var key in indexSectionLabels)
-  {
-    var link = document.createElement('a');
+  for (let key in indexSectionLabels) {
+    const link = document.createElement('a');
     link.setAttribute('class','SelectItem');
     link.setAttribute('onclick','searchBox.OnSelectItem('+key+')');
     link.href='javascript:void(0)';
     link.innerHTML='<span class="SelectionMark">&#160;</span>'+indexSectionLabels[key];
     results.appendChild(link);
   }
-  searchBox.OnSelectItem(0);
 
-  var input = document.getElementById("MSearchSelect");
-  var searchSelectWindow = document.getElementById("MSearchSelectWindow");
+  const input = document.getElementById("MSearchSelect");
+  const searchSelectWindow = document.getElementById("MSearchSelectWindow");
   input.tabIndex=0;
   input.addEventListener("keydown", function(event) {
     if (event.keyCode==13 || event.keyCode==40) {
@@ -836,5 +687,8 @@ function init_search()
       }
     }
   });
+  const name = Cookie.readSetting(SEARCH_COOKIE_NAME,0);
+  const id = searchBox.GetSelectionIdByName(name);
+  searchBox.OnSelectItem(id);
 }
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diff --git a/docs/html/struct_g_f_context-members.html b/docs/html/struct_g_f_context-members.html
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+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="cookie.js"></script>
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+<link href="doxygen.css" rel="stylesheet" type="text/css" />
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+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
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+/* @license-end */
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+<script type="text/javascript">
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+<script type="text/javascript">
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="headertitle"><div class="title">GFContext Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="struct_g_f_context.html">GFContext</a>, including all inherited members.</p>
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+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#ab566b9194a7869f6b69ba7adc67d5d34">engine</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a4aa31d479303659b475558ef2df30cbe">init_composition_from_abundance_vector</a>(const std::vector&lt; double &gt; &amp;abundances, size_t num_species) const</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#a18aab1769f5e3071d768753141f15c6c">init_engine_from_policy</a>(const std::string &amp;policy_name, const double *abundances, size_t num_species)</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#ae1d09e19a43ddca42a1c3d360daf548e">init_solver_from_engine</a>()=0</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#ad3067d7c133f7e60849e8214fad6ed4e">init_species_map</a>(const std::vector&lt; std::string &gt; &amp;species_names)</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a82e384a1c565caee2f23eaeccd701a58">last_error</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#a6d053d819a80084fcda10cb00d06f9f8">policy</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#ad65d2f34696aa6368a49768fc5c0ebf7">speciesList</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#a4da09184145ea3bddef5dee206dea458">~GFContext</a>()=default</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="struct_g_f_context-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">GFContext Struct Reference<span class="mlabels"><span class="mlabel abstract">abstract</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;gridfire_context.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for GFContext:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="struct_g_f_context__inherit__graph.svg" width="259" height="111"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for GFContext:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="struct_g_f_context__coll__graph.svg" width="100%" height="529"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a4da09184145ea3bddef5dee206dea458" id="r_a4da09184145ea3bddef5dee206dea458"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4da09184145ea3bddef5dee206dea458">~GFContext</a> ()=default</td></tr>
+<tr class="separator:a4da09184145ea3bddef5dee206dea458"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ad3067d7c133f7e60849e8214fad6ed4e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a18aab1769f5e3071d768753141f15c6c" id="r_a18aab1769f5e3071d768753141f15c6c"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a18aab1769f5e3071d768753141f15c6c">init_engine_from_policy</a> (const std::string &amp;policy_name, const double *abundances, size_t num_species)</td></tr>
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+<tr class="separator:ae1d09e19a43ddca42a1c3d360daf548e"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a4aa31d479303659b475558ef2df30cbe"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a6d053d819a80084fcda10cb00d06f9f8" id="r_a6d053d819a80084fcda10cb00d06f9f8"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6d053d819a80084fcda10cb00d06f9f8">policy</a></td></tr>
+<tr class="separator:a6d053d819a80084fcda10cb00d06f9f8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab566b9194a7869f6b69ba7adc67d5d34" id="r_ab566b9194a7869f6b69ba7adc67d5d34"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab566b9194a7869f6b69ba7adc67d5d34">engine</a></td></tr>
+<tr class="separator:ab566b9194a7869f6b69ba7adc67d5d34"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af77eab6a1ee3b0c1ebf50b7200040dfa" id="r_af77eab6a1ee3b0c1ebf50b7200040dfa"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af77eab6a1ee3b0c1ebf50b7200040dfa">engine_ctx</a></td></tr>
+<tr class="separator:af77eab6a1ee3b0c1ebf50b7200040dfa"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ad65d2f34696aa6368a49768fc5c0ebf7"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a82e384a1c565caee2f23eaeccd701a58"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a4da09184145ea3bddef5dee206dea458" name="a4da09184145ea3bddef5dee206dea458"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4da09184145ea3bddef5dee206dea458">&#9670;&#160;</a></span>~GFContext()</h2>
+
+<div class="memitem">
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+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual GFContext::~GFContext </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel virtual">virtual</span><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a4aa31d479303659b475558ef2df30cbe" name="a4aa31d479303659b475558ef2df30cbe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4aa31d479303659b475558ef2df30cbe">&#9670;&#160;</a></span>init_composition_from_abundance_vector()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">fourdst::composition::Composition GFContext::init_composition_from_abundance_vector </td>
+          <td>(</td>
+          <td class="paramtype">const std::vector&lt; double &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>abundances</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>&#160;) const</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a18aab1769f5e3071d768753141f15c6c" name="a18aab1769f5e3071d768753141f15c6c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a18aab1769f5e3071d768753141f15c6c">&#9670;&#160;</a></span>init_engine_from_policy()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void GFContext::init_engine_from_policy </td>
+          <td>(</td>
+          <td class="paramtype">const std::string &amp;</td>          <td class="paramname"><span class="paramname"><em>policy_name</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const double *</td>          <td class="paramname"><span class="paramname"><em>abundances</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ae1d09e19a43ddca42a1c3d360daf548e" name="ae1d09e19a43ddca42a1c3d360daf548e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae1d09e19a43ddca42a1c3d360daf548e">&#9670;&#160;</a></span>init_solver_from_engine()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual void GFContext::init_solver_from_engine </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implemented in <a class="el" href="struct_g_f_grid_context.html#afe26323c4fb2f87c5740199c64833e70">GFGridContext</a>, and <a class="el" href="struct_g_f_point_context.html#a0fc95dc7b98865f7821ff945e809635a">GFPointContext</a>.</p>
+
+</div>
+</div>
+<a id="ad3067d7c133f7e60849e8214fad6ed4e" name="ad3067d7c133f7e60849e8214fad6ed4e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad3067d7c133f7e60849e8214fad6ed4e">&#9670;&#160;</a></span>init_species_map()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void GFContext::init_species_map </td>
+          <td>(</td>
+          <td class="paramtype">const std::vector&lt; std::string &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>species_names</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="ab566b9194a7869f6b69ba7adc67d5d34" name="ab566b9194a7869f6b69ba7adc67d5d34"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab566b9194a7869f6b69ba7adc67d5d34">&#9670;&#160;</a></span>engine</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">gridfire::engine::DynamicEngine</a>* GFContext::engine</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="af77eab6a1ee3b0c1ebf50b7200040dfa" name="af77eab6a1ee3b0c1ebf50b7200040dfa"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af77eab6a1ee3b0c1ebf50b7200040dfa">&#9670;&#160;</a></span>engine_ctx</h2>
+
+<div class="memitem">
+<div class="memproto">
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+          <td class="memname">std::unique_ptr&lt;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a>&gt; GFContext::engine_ctx</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a82e384a1c565caee2f23eaeccd701a58" name="a82e384a1c565caee2f23eaeccd701a58"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a82e384a1c565caee2f23eaeccd701a58">&#9670;&#160;</a></span>last_error</h2>
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+<div class="memitem">
+<div class="memproto">
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+          <td class="memname">std::string GFContext::last_error</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a6d053d819a80084fcda10cb00d06f9f8" name="a6d053d819a80084fcda10cb00d06f9f8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6d053d819a80084fcda10cb00d06f9f8">&#9670;&#160;</a></span>policy</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt;<a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a>&gt; GFContext::policy</td>
+        </tr>
+      </table>
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+
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+</div>
+<a id="ad65d2f34696aa6368a49768fc5c0ebf7" name="ad65d2f34696aa6368a49768fc5c0ebf7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad65d2f34696aa6368a49768fc5c0ebf7">&#9670;&#160;</a></span>speciesList</h2>
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+          <td class="memname">std::vector&lt;fourdst::atomic::Species&gt; GFContext::speciesList</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following files:<ul>
+<li>src/extern/include/gridfire/extern/<a class="el" href="gridfire__context_8h.html">gridfire_context.h</a></li>
+<li>src/extern/lib/<a class="el" href="gridfire__context_8cpp.html">gridfire_context.cpp</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
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+  <ul>
+    <li class="navelem"><a class="el" href="struct_g_f_context.html">GFContext</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+    [ "init_engine_from_policy", "struct_g_f_context.html#a18aab1769f5e3071d768753141f15c6c", null ],
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+    [ "init_species_map", "struct_g_f_context.html#ad3067d7c133f7e60849e8214fad6ed4e", null ],
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diff --git a/docs/html/struct_g_f_grid_context-members.html b/docs/html/struct_g_f_grid_context-members.html
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+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<div id="titlearea">
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="header">
+  <div class="headertitle"><div class="title">GFGridContext Member List</div></div>
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+<div class="contents">
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+<p>This is the complete list of members for <a class="el" href="struct_g_f_grid_context.html">GFGridContext</a>, including all inherited members.</p>
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+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#ab566b9194a7869f6b69ba7adc67d5d34">engine</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#a79ccefa304bba5d0c82426f9e2817e16">evolve</a>(const double *Y_in, size_t num_species, const double *T, const double *rho, double tMax, double dt0, double *Y_out, double *energy_out, double *dEps_dT, double *dEps_dRho, double *specific_neutrino_energy_loss, double *specific_neutrino_flux, double *mass_lost) const</td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#a8136e0c3ad23934ff254fac1f33ab5b8">get_zones</a>() const</td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a4aa31d479303659b475558ef2df30cbe">init_composition_from_abundance_vector</a>(const std::vector&lt; double &gt; &amp;abundances, size_t num_species) const</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#a18aab1769f5e3071d768753141f15c6c">init_engine_from_policy</a>(const std::string &amp;policy_name, const double *abundances, size_t num_species)</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#afe26323c4fb2f87c5740199c64833e70">init_solver_from_engine</a>() override</td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#ad3067d7c133f7e60849e8214fad6ed4e">init_species_map</a>(const std::vector&lt; std::string &gt; &amp;species_names)</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a82e384a1c565caee2f23eaeccd701a58">last_error</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#a48f5ba2ed3318d64a3a2d6207e0528e0">local_solver</a></td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a6d053d819a80084fcda10cb00d06f9f8">policy</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#ae6bbc4c400e9afb1d57087a7cdc00d60">set_zones</a>(const size_t num_zones)</td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#a92cf3bc0d148eda660cccce86bffedc3">solver</a></td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#a9e6229b2d28959adb9aae6524ed5f730">solver_ctx</a></td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#ad65d2f34696aa6368a49768fc5c0ebf7">speciesList</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_grid_context.html#a4d17021ee5be4abe7db9286d7bcd695d">zones</a></td><td class="entry"><a class="el" href="struct_g_f_grid_context.html">GFGridContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a4da09184145ea3bddef5dee206dea458">~GFContext</a>()=default</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
+</div><!-- doc-content -->
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+<title>GridFire: GFGridContext Struct Reference</title>
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+<div id="titlearea">
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="struct_g_f_grid_context-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">GFGridContext Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;gridfire_context.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for GFGridContext:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="struct_g_f_grid_context__inherit__graph.svg" width="120" height="111"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for GFGridContext:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="struct_g_f_grid_context__coll__graph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:afe26323c4fb2f87c5740199c64833e70" id="r_afe26323c4fb2f87c5740199c64833e70"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#afe26323c4fb2f87c5740199c64833e70">init_solver_from_engine</a> () override</td></tr>
+<tr class="separator:afe26323c4fb2f87c5740199c64833e70"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ae6bbc4c400e9afb1d57087a7cdc00d60"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a8136e0c3ad23934ff254fac1f33ab5b8"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a79ccefa304bba5d0c82426f9e2817e16"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_struct_g_f_context"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_struct_g_f_context')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="struct_g_f_context.html">GFContext</a></td></tr>
+<tr class="memitem:a4da09184145ea3bddef5dee206dea458 inherit pub_methods_struct_g_f_context" id="r_a4da09184145ea3bddef5dee206dea458"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_g_f_context.html#a4da09184145ea3bddef5dee206dea458">~GFContext</a> ()=default</td></tr>
+<tr class="separator:a4da09184145ea3bddef5dee206dea458 inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ad3067d7c133f7e60849e8214fad6ed4e inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a18aab1769f5e3071d768753141f15c6c inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a4aa31d479303659b475558ef2df30cbe inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
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+<tr class="memitem:a6d053d819a80084fcda10cb00d06f9f8 inherit pub_attribs_struct_g_f_context" id="r_a6d053d819a80084fcda10cb00d06f9f8"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_g_f_context.html#a6d053d819a80084fcda10cb00d06f9f8">policy</a></td></tr>
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+<tr class="separator:ad65d2f34696aa6368a49768fc5c0ebf7 inherit pub_attribs_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a82e384a1c565caee2f23eaeccd701a58 inherit pub_attribs_struct_g_f_context" id="r_a82e384a1c565caee2f23eaeccd701a58"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_g_f_context.html#a82e384a1c565caee2f23eaeccd701a58">last_error</a></td></tr>
+<tr class="separator:a82e384a1c565caee2f23eaeccd701a58 inherit pub_attribs_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a79ccefa304bba5d0c82426f9e2817e16" name="a79ccefa304bba5d0c82426f9e2817e16"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a79ccefa304bba5d0c82426f9e2817e16">&#9670;&#160;</a></span>evolve()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">int GFGridContext::evolve </td>
+          <td>(</td>
+          <td class="paramtype">const double *</td>          <td class="paramname"><span class="paramname"><em>Y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const double *</td>          <td class="paramname"><span class="paramname"><em>T</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const double *</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>tMax</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double *</td>          <td class="paramname"><span class="paramname"><em>Y_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double *</td>          <td class="paramname"><span class="paramname"><em>energy_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double *</td>          <td class="paramname"><span class="paramname"><em>dEps_dT</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double *</td>          <td class="paramname"><span class="paramname"><em>dEps_dRho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double *</td>          <td class="paramname"><span class="paramname"><em>specific_neutrino_energy_loss</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double *</td>          <td class="paramname"><span class="paramname"><em>specific_neutrino_flux</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double *</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>&#160;) const</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a8136e0c3ad23934ff254fac1f33ab5b8" name="a8136e0c3ad23934ff254fac1f33ab5b8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8136e0c3ad23934ff254fac1f33ab5b8">&#9670;&#160;</a></span>get_zones()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t GFGridContext::get_zones </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="afe26323c4fb2f87c5740199c64833e70" name="afe26323c4fb2f87c5740199c64833e70"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afe26323c4fb2f87c5740199c64833e70">&#9670;&#160;</a></span>init_solver_from_engine()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void GFGridContext::init_solver_from_engine </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="struct_g_f_context.html#ae1d09e19a43ddca42a1c3d360daf548e">GFContext</a>.</p>
+
+</div>
+</div>
+<a id="ae6bbc4c400e9afb1d57087a7cdc00d60" name="ae6bbc4c400e9afb1d57087a7cdc00d60"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae6bbc4c400e9afb1d57087a7cdc00d60">&#9670;&#160;</a></span>set_zones()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void GFGridContext::set_zones </td>
+          <td>(</td>
+          <td class="paramtype">const size_t</td>          <td class="paramname"><span class="paramname"><em>num_zones</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
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+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a48f5ba2ed3318d64a3a2d6207e0528e0" name="a48f5ba2ed3318d64a3a2d6207e0528e0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a48f5ba2ed3318d64a3a2d6207e0528e0">&#9670;&#160;</a></span>local_solver</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt;<a class="el" href="namespacegridfire_1_1solver.html#a3ba32e30d3e30cbbca5ffb22dff077ee">gridfire::solver::SingleZoneDynamicNetworkSolver</a>&gt; GFGridContext::local_solver</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a92cf3bc0d148eda660cccce86bffedc3" name="a92cf3bc0d148eda660cccce86bffedc3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a92cf3bc0d148eda660cccce86bffedc3">&#9670;&#160;</a></span>solver</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt;<a class="el" href="namespacegridfire_1_1solver.html#a521165ce7610e3438607af6500f82fdd">gridfire::solver::MultiZoneDynamicNetworkSolver</a>&gt; GFGridContext::solver</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a9e6229b2d28959adb9aae6524ed5f730" name="a9e6229b2d28959adb9aae6524ed5f730"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9e6229b2d28959adb9aae6524ed5f730">&#9670;&#160;</a></span>solver_ctx</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt;<a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a>&gt; GFGridContext::solver_ctx</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a4d17021ee5be4abe7db9286d7bcd695d" name="a4d17021ee5be4abe7db9286d7bcd695d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4d17021ee5be4abe7db9286d7bcd695d">&#9670;&#160;</a></span>zones</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t GFGridContext::zones</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following files:<ul>
+<li>src/extern/include/gridfire/extern/<a class="el" href="gridfire__context_8h.html">gridfire_context.h</a></li>
+<li>src/extern/lib/<a class="el" href="gridfire__context_8cpp.html">gridfire_context.cpp</a></li>
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+    [ "get_zones", "struct_g_f_grid_context.html#a8136e0c3ad23934ff254fac1f33ab5b8", null ],
+    [ "init_solver_from_engine", "struct_g_f_grid_context.html#afe26323c4fb2f87c5740199c64833e70", null ],
+    [ "set_zones", "struct_g_f_grid_context.html#ae6bbc4c400e9afb1d57087a7cdc00d60", null ],
+    [ "local_solver", "struct_g_f_grid_context.html#a48f5ba2ed3318d64a3a2d6207e0528e0", null ],
+    [ "solver", "struct_g_f_grid_context.html#a92cf3bc0d148eda660cccce86bffedc3", null ],
+    [ "solver_ctx", "struct_g_f_grid_context.html#a9e6229b2d28959adb9aae6524ed5f730", null ],
+    [ "zones", "struct_g_f_grid_context.html#a4d17021ee5be4abe7db9286d7bcd695d", null ]
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diff --git a/docs/html/struct_g_f_point_context-members.html b/docs/html/struct_g_f_point_context-members.html
new file mode 100644
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+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=11"/>
+<meta name="generator" content="Doxygen 1.13.2"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: Member List</title>
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+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<script type="text/javascript" src="cookie.js"></script>
+<link href="search/search.css" rel="stylesheet" type="text/css"/>
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+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
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+/* @license-end */
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="headertitle"><div class="title">GFPointContext Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="struct_g_f_point_context.html">GFPointContext</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#ab566b9194a7869f6b69ba7adc67d5d34">engine</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#af77eab6a1ee3b0c1ebf50b7200040dfa">engine_ctx</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_point_context.html#ac1ea5f9d1e909636228d66bb52e94889">evolve</a>(const double *Y_in, size_t num_species, double T, double rho, double tMax, double dt0, double *Y_out, double &amp;energy_out, double &amp;dEps_dT, double &amp;dEps_dRho, double &amp;specific_neutrino_energy_loss, double &amp;specific_neutrino_flux, double &amp;mass_lost) const</td><td class="entry"><a class="el" href="struct_g_f_point_context.html">GFPointContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#a4aa31d479303659b475558ef2df30cbe">init_composition_from_abundance_vector</a>(const std::vector&lt; double &gt; &amp;abundances, size_t num_species) const</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a18aab1769f5e3071d768753141f15c6c">init_engine_from_policy</a>(const std::string &amp;policy_name, const double *abundances, size_t num_species)</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_point_context.html#a0fc95dc7b98865f7821ff945e809635a">init_solver_from_engine</a>() override</td><td class="entry"><a class="el" href="struct_g_f_point_context.html">GFPointContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#ad3067d7c133f7e60849e8214fad6ed4e">init_species_map</a>(const std::vector&lt; std::string &gt; &amp;species_names)</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#a82e384a1c565caee2f23eaeccd701a58">last_error</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a6d053d819a80084fcda10cb00d06f9f8">policy</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_point_context.html#a05d85e0dc718ba0c8854e831a574f6ac">solver</a></td><td class="entry"><a class="el" href="struct_g_f_point_context.html">GFPointContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_point_context.html#a5158bd7c67f4a0e4395b78ce4009f275">solver_ctx</a></td><td class="entry"><a class="el" href="struct_g_f_point_context.html">GFPointContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="struct_g_f_context.html#ad65d2f34696aa6368a49768fc5c0ebf7">speciesList</a></td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="struct_g_f_context.html#a4da09184145ea3bddef5dee206dea458">~GFContext</a>()=default</td><td class="entry"><a class="el" href="struct_g_f_context.html">GFContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
+</div><!-- doc-content -->
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/struct_g_f_point_context.html b/docs/html/struct_g_f_point_context.html
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: GFPointContext Struct Reference</title>
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+<div id="titlearea">
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="struct_g_f_point_context-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">GFPointContext Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;gridfire_context.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for GFPointContext:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="struct_g_f_point_context__inherit__graph.svg" width="127" height="111"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for GFPointContext:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="struct_g_f_point_context__coll__graph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a0fc95dc7b98865f7821ff945e809635a" id="r_a0fc95dc7b98865f7821ff945e809635a"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0fc95dc7b98865f7821ff945e809635a">init_solver_from_engine</a> () override</td></tr>
+<tr class="separator:a0fc95dc7b98865f7821ff945e809635a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ac1ea5f9d1e909636228d66bb52e94889" id="r_ac1ea5f9d1e909636228d66bb52e94889"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac1ea5f9d1e909636228d66bb52e94889">evolve</a> (const double *Y_in, size_t num_species, double T, double rho, double tMax, double dt0, double *Y_out, double &amp;energy_out, double &amp;dEps_dT, double &amp;dEps_dRho, double &amp;specific_neutrino_energy_loss, double &amp;specific_neutrino_flux, double &amp;mass_lost) const</td></tr>
+<tr class="separator:ac1ea5f9d1e909636228d66bb52e94889"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_struct_g_f_context"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_struct_g_f_context')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="struct_g_f_context.html">GFContext</a></td></tr>
+<tr class="memitem:a4da09184145ea3bddef5dee206dea458 inherit pub_methods_struct_g_f_context" id="r_a4da09184145ea3bddef5dee206dea458"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_g_f_context.html#a4da09184145ea3bddef5dee206dea458">~GFContext</a> ()=default</td></tr>
+<tr class="separator:a4da09184145ea3bddef5dee206dea458 inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ad3067d7c133f7e60849e8214fad6ed4e inherit pub_methods_struct_g_f_context" id="r_ad3067d7c133f7e60849e8214fad6ed4e"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_g_f_context.html#ad3067d7c133f7e60849e8214fad6ed4e">init_species_map</a> (const std::vector&lt; std::string &gt; &amp;species_names)</td></tr>
+<tr class="separator:ad3067d7c133f7e60849e8214fad6ed4e inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a18aab1769f5e3071d768753141f15c6c inherit pub_methods_struct_g_f_context" id="r_a18aab1769f5e3071d768753141f15c6c"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_g_f_context.html#a18aab1769f5e3071d768753141f15c6c">init_engine_from_policy</a> (const std::string &amp;policy_name, const double *abundances, size_t num_species)</td></tr>
+<tr class="separator:a18aab1769f5e3071d768753141f15c6c inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4aa31d479303659b475558ef2df30cbe inherit pub_methods_struct_g_f_context" id="r_a4aa31d479303659b475558ef2df30cbe"><td class="memItemLeft" align="right" valign="top">fourdst::composition::Composition&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_g_f_context.html#a4aa31d479303659b475558ef2df30cbe">init_composition_from_abundance_vector</a> (const std::vector&lt; double &gt; &amp;abundances, size_t num_species) const</td></tr>
+<tr class="separator:a4aa31d479303659b475558ef2df30cbe inherit pub_methods_struct_g_f_context"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
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+<div class="memitem">
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+          <td>(</td>
+          <td class="paramtype">const double *</td>          <td class="paramname"><span class="paramname"><em>Y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>num_species</em></span>, </td>
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+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>T</em></span>, </td>
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+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
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+        <tr>
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+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>tMax</em></span>, </td>
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+        <tr>
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+          <td class="paramtype">double &amp;</td>          <td class="paramname"><span class="paramname"><em>specific_neutrino_flux</em></span>, </td>
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+        <tr>
+          <td class="paramkey"></td>
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+<h2 class="memtitle"><span class="permalink"><a href="#a0fc95dc7b98865f7821ff945e809635a">&#9670;&#160;</a></span>init_solver_from_engine()</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a05d85e0dc718ba0c8854e831a574f6ac">&#9670;&#160;</a></span>solver</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a5158bd7c67f4a0e4395b78ce4009f275">&#9670;&#160;</a></span>solver_ctx</h2>
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index a84e3421..ab2dfeac 100644
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+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="structgridfire_1_1engine_1_1_graph_engine_1_1_precomputation_kernel_results-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::GraphEngine::PrecomputationKernelResults Struct Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<div class="dynheader">
+Collaboration diagram for gridfire::engine::GraphEngine::PrecomputationKernelResults:</div>
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
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+</table>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a4dce937771ebdb26002a79e37f975358" name="a4dce937771ebdb26002a79e37f975358"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4dce937771ebdb26002a79e37f975358">&#9670;&#160;</a></span>dydt_vector</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;double&gt; gridfire::engine::GraphEngine::PrecomputationKernelResults::dydt_vector</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a41d711a6f545edb16615d9b6c78d0db2" name="a41d711a6f545edb16615d9b6c78d0db2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a41d711a6f545edb16615d9b6c78d0db2">&#9670;&#160;</a></span>total_neutrino_energy_loss_rate</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::engine::GraphEngine::PrecomputationKernelResults::total_neutrino_energy_loss_rate {0.0}</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a38f78327edd6e0cd48df898305d7e080" name="a38f78327edd6e0cd48df898305d7e080"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a38f78327edd6e0cd48df898305d7e080">&#9670;&#160;</a></span>total_neutrino_flux</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::engine::GraphEngine::PrecomputationKernelResults::total_neutrino_flux {0.0}</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
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 <p>Struct representing a QSE group.  
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+
+<p><code>#include &lt;engine_multiscale.h&gt;</code></p>
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+  <td class="mlabels-right">
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+  <td class="mlabels-right">
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html#a175221aece7aa2c0da7534e0e1f1c7f7">ctx</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver_1_1_user_data.html">gridfire::engine::MultiscalePartitioningEngineView::QSESolver::UserData</a></td><td class="entry"></td></tr>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">clone</a>() const =0</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#a1ee6453778d15be0b6dc546f1e5e4768">is_initialized</a>() const =0</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::AbstractScratchPad Struct Reference<span class="mlabels"><span class="mlabel abstract">abstract</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Abstract base struct for engine scratchpad memory.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;scratchpad_abstract.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::engine::scratch::AbstractScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad__inherit__graph.svg" width="434" height="262"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:ac972e0fa19ff7623a6f0f8aedc5e174b" id="r_ac972e0fa19ff7623a6f0f8aedc5e174b"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a> ()=default</td></tr>
+<tr class="memdesc:ac972e0fa19ff7623a6f0f8aedc5e174b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor for proper cleanup of derived classes.  <br /></td></tr>
+<tr class="separator:ac972e0fa19ff7623a6f0f8aedc5e174b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a1ee6453778d15be0b6dc546f1e5e4768" id="r_a1ee6453778d15be0b6dc546f1e5e4768"><td class="memItemLeft" align="right" valign="top">virtual bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1ee6453778d15be0b6dc546f1e5e4768">is_initialized</a> () const =0</td></tr>
+<tr class="memdesc:a1ee6453778d15be0b6dc546f1e5e4768"><td class="mdescLeft">&#160;</td><td class="mdescRight">Check whether the scratchpad has been properly initialized.  <br /></td></tr>
+<tr class="separator:a1ee6453778d15be0b6dc546f1e5e4768"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aaaa5135efe8b9635e8f91797e9c85b3e" id="r_aaaa5135efe8b9635e8f91797e9c85b3e"><td class="memItemLeft" align="right" valign="top">virtual std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aaaa5135efe8b9635e8f91797e9c85b3e">clone</a> () const =0</td></tr>
+<tr class="memdesc:aaaa5135efe8b9635e8f91797e9c85b3e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Create a deep copy of this scratchpad.  <br /></td></tr>
+<tr class="separator:aaaa5135efe8b9635e8f91797e9c85b3e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Abstract base struct for engine scratchpad memory. </p>
+<p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html" title="Abstract base struct for engine scratchpad memory.">AbstractScratchPad</a> defines the interface for temporary working memory containers used by computational engines. Implementations should provide storage for intermediate results, cached values, or pre-allocated buffers that persist across multiple computational steps.</p>
+<p>This interface enables polymorphic handling of different scratchpad types while ensuring proper resource management through virtual destruction and deep cloning capabilities.</p>
+<dl class="section user"><dt>Thread Safety</dt><dd>This interface is <b>not thread-safe</b> by design. Scratchpads are intended to be used as thread-local working memory. Each thread should operate on its own independent scratchpad instance. Use the <a class="el" href="#aaaa5135efe8b9635e8f91797e9c85b3e" title="Create a deep copy of this scratchpad.">clone()</a> method to create separate copies for each thread in parallel execution contexts. Sharing a single scratchpad instance across multiple threads without external synchronization will result in undefined behavior. </dd></dl>
+</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="ac972e0fa19ff7623a6f0f8aedc5e174b" name="ac972e0fa19ff7623a6f0f8aedc5e174b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac972e0fa19ff7623a6f0f8aedc5e174b">&#9670;&#160;</a></span>~AbstractScratchPad()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual gridfire::engine::scratch::AbstractScratchPad::~AbstractScratchPad </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel virtual">virtual</span><span class="mlabel default">default</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Virtual destructor for proper cleanup of derived classes. </p>
+<p>Ensures that resources held by concrete scratchpad implementations are properly released when the scratchpad is destroyed through a base class pointer. </p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="aaaa5135efe8b9635e8f91797e9c85b3e" name="aaaa5135efe8b9635e8f91797e9c85b3e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aaaa5135efe8b9635e8f91797e9c85b3e">&#9670;&#160;</a></span>clone()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt; gridfire::engine::scratch::AbstractScratchPad::clone </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Create a deep copy of this scratchpad. </p>
+<p>Produces an independent clone of the scratchpad, including all internal state and allocated memory. This is essential for parallel execution scenarios where each thread requires its own working memory.</p>
+<dl class="section return"><dt>Returns</dt><dd>A unique pointer to a newly allocated copy of this scratchpad.</dd></dl>
+<dl class="section note"><dt>Note</dt><dd>The returned clone should be fully independent; modifications to the clone must not affect the original, and vice versa.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line">std::unique_ptr&lt;AbstractScratchPad&gt; original = create_scratchpad();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create independent copies for parallel workers</span></div>
+<div class="line">std::vector&lt;std::unique_ptr&lt;AbstractScratchPad&gt;&gt; worker_scratches;</div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keywordtype">int</span> i = 0; i &lt; num_threads; ++i) {</div>
+<div class="line">    worker_scratches.push_back(original-&gt;clone());</div>
+<div class="line">}</div>
+</div><!-- fragment --> </dd></dl>
+
+<p>Implemented in <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#ae2cd00926412c7ef78dbfb4647cc2495">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#ae6c007066aee6807530c8611e717024d">gridfire::engine::scratch::DefinedEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aa5ececd1fb07a0aabb662c42dcb824b5">gridfire::engine::scratch::GraphEngineScratchPad</a>, and <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a7dbce2e9a2f940cbde8888aa67f5f3aa">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a>.</p>
+
+</div>
+</div>
+<a id="a1ee6453778d15be0b6dc546f1e5e4768" name="a1ee6453778d15be0b6dc546f1e5e4768"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1ee6453778d15be0b6dc546f1e5e4768">&#9670;&#160;</a></span>is_initialized()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual bool gridfire::engine::scratch::AbstractScratchPad::is_initialized </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Check whether the scratchpad has been properly initialized. </p>
+<p>Derived classes should return true only after all necessary memory allocations and setup operations have been completed successfully.</p>
+<dl class="section return"><dt>Returns</dt><dd>true if the scratchpad is initialized and ready for use. </dd>
+<dd>
+false if the scratchpad has not been initialized or initialization failed.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keyword">auto</span> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a> = create_scratchpad();</div>
+<div class="line"><span class="keywordflow">if</span> (!<a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>-&gt;is_initialized()) {</div>
+<div class="line">    <span class="keywordflow">throw</span> std::runtime_error(<span class="stringliteral">&quot;Scratchpad not ready for computation&quot;</span>);</div>
+<div class="line">}</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+</div><!-- fragment --> </dd></dl>
+
+<p>Implemented in <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a2ad134e1451dc0b5544f293d142c8c71">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a8820a147ba891c656dea16b3dd2d20da">gridfire::engine::scratch::DefinedEngineViewScratchPad</a>, <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ac31f77dafaa622ad33496a451caca1ba">gridfire::engine::scratch::GraphEngineScratchPad</a>, and <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ae61c7a93f9d4f8ded1e9c9dd2221d864">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a>.</p>
+
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+  <div class="headertitle"><div class="title">gridfire::engine::scratch::AdaptiveEngineViewScratchPad Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a5ece8be9ba2be39aae7ca77ff869a539">active_reactions</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#acedd3559de9a91a14f8ddfbf14897d9c">active_species</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#ae2cd00926412c7ef78dbfb4647cc2495">clone</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a1e21ec9fcd89cc3af2a93d7105fd95d5">has_initialized</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a5a8a4b9c10bc56bb341842d4f9aee2ea">ID</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a8fc25bac8529777504a206fc9fa2a5d6">initialize</a>(const AdaptiveEngineView &amp;engine)</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html#a2ad134e1451dc0b5544f293d142c8c71">is_initialized</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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diff --git a/docs/html/structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html b/docs/html/structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html
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+<title>GridFire: gridfire::engine::scratch::AdaptiveEngineViewScratchPad Struct Reference</title>
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+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
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+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
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+</table>
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+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="#pub-static-attribs">Static Public Attributes</a> &#124;
+<a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::AdaptiveEngineViewScratchPad Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad for storing working memory used by <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> computations.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;engine_adaptive_scratchpad.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::engine::scratch::AdaptiveEngineViewScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad__inherit__graph.svg" width="228" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::engine::scratch::AdaptiveEngineViewScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad__coll__graph.svg" width="100%" height="523"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a2ad134e1451dc0b5544f293d142c8c71" id="r_a2ad134e1451dc0b5544f293d142c8c71"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2ad134e1451dc0b5544f293d142c8c71">is_initialized</a> () const override</td></tr>
+<tr class="memdesc:a2ad134e1451dc0b5544f293d142c8c71"><td class="mdescLeft">&#160;</td><td class="mdescRight">Check whether the scratchpad has been initialized.  <br /></td></tr>
+<tr class="separator:a2ad134e1451dc0b5544f293d142c8c71"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8fc25bac8529777504a206fc9fa2a5d6" id="r_a8fc25bac8529777504a206fc9fa2a5d6"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8fc25bac8529777504a206fc9fa2a5d6">initialize</a> (const <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">AdaptiveEngineView</a> &amp;engine)</td></tr>
+<tr class="memdesc:a8fc25bac8529777504a206fc9fa2a5d6"><td class="mdescLeft">&#160;</td><td class="mdescRight">Initialize the scratchpad from an <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a>.  <br /></td></tr>
+<tr class="separator:a8fc25bac8529777504a206fc9fa2a5d6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ae2cd00926412c7ef78dbfb4647cc2495" id="r_ae2cd00926412c7ef78dbfb4647cc2495"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae2cd00926412c7ef78dbfb4647cc2495">clone</a> () const override</td></tr>
+<tr class="memdesc:ae2cd00926412c7ef78dbfb4647cc2495"><td class="mdescLeft">&#160;</td><td class="mdescRight">Create a deep copy of this scratchpad.  <br /></td></tr>
+<tr class="separator:ae2cd00926412c7ef78dbfb4647cc2495"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td></tr>
+<tr class="memitem:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad" id="r_ac972e0fa19ff7623a6f0f8aedc5e174b"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a> ()=default</td></tr>
+<tr class="memdesc:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor for proper cleanup of derived classes.  <br /></td></tr>
+<tr class="separator:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a1e21ec9fcd89cc3af2a93d7105fd95d5" id="r_a1e21ec9fcd89cc3af2a93d7105fd95d5"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1e21ec9fcd89cc3af2a93d7105fd95d5">has_initialized</a> = false</td></tr>
+<tr class="memdesc:a1e21ec9fcd89cc3af2a93d7105fd95d5"><td class="mdescLeft">&#160;</td><td class="mdescRight">Flag indicating whether the scratchpad has been initialized.  <br /></td></tr>
+<tr class="separator:a1e21ec9fcd89cc3af2a93d7105fd95d5"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:acedd3559de9a91a14f8ddfbf14897d9c" id="r_acedd3559de9a91a14f8ddfbf14897d9c"><td class="memItemLeft" align="right" valign="top">std::vector&lt; fourdst::atomic::Species &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#acedd3559de9a91a14f8ddfbf14897d9c">active_species</a></td></tr>
+<tr class="memdesc:acedd3559de9a91a14f8ddfbf14897d9c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Vector of species currently active in the adaptive network.  <br /></td></tr>
+<tr class="separator:acedd3559de9a91a14f8ddfbf14897d9c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a5ece8be9ba2be39aae7ca77ff869a539" id="r_a5ece8be9ba2be39aae7ca77ff869a539"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5ece8be9ba2be39aae7ca77ff869a539">active_reactions</a></td></tr>
+<tr class="memdesc:a5ece8be9ba2be39aae7ca77ff869a539"><td class="mdescLeft">&#160;</td><td class="mdescRight">Set of reactions currently active in the adaptive network.  <br /></td></tr>
+<tr class="separator:a5ece8be9ba2be39aae7ca77ff869a539"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-static-attribs" name="pub-static-attribs"></a>
+Static Public Attributes</h2></td></tr>
+<tr class="memitem:a5a8a4b9c10bc56bb341842d4f9aee2ea" id="r_a5a8a4b9c10bc56bb341842d4f9aee2ea"><td class="memItemLeft" align="right" valign="top">static constexpr auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5a8a4b9c10bc56bb341842d4f9aee2ea">ID</a> = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea7ea429f895ad8257bbf75dc52312d999">ScratchPadType::ADAPTIVE_ENGINE_VIEW_SCRATCHPAD</a></td></tr>
+<tr class="memdesc:a5a8a4b9c10bc56bb341842d4f9aee2ea"><td class="mdescLeft">&#160;</td><td class="mdescRight">Unique identifier for this scratchpad type.  <br /></td></tr>
+<tr class="separator:a5a8a4b9c10bc56bb341842d4f9aee2ea"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad for storing working memory used by <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> computations. </p>
+<p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html" title="Scratchpad for storing working memory used by AdaptiveEngineView computations.">AdaptiveEngineViewScratchPad</a> provides temporary storage for the active species and reactions determined by the adaptive network algorithm. This allows the engine to avoid recalculating network topology on every evaluation.</p>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. Each thread should operate on its own independent instance. Use <a class="el" href="#ae2cd00926412c7ef78dbfb4647cc2495" title="Create a deep copy of this scratchpad.">clone()</a> to create copies for parallel execution. </dd></dl>
+</div><h2 class="groupheader">Member Function Documentation</h2>
+<a id="ae2cd00926412c7ef78dbfb4647cc2495" name="ae2cd00926412c7ef78dbfb4647cc2495"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae2cd00926412c7ef78dbfb4647cc2495">&#9670;&#160;</a></span>clone()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt; gridfire::engine::scratch::AdaptiveEngineViewScratchPad::clone </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Create a deep copy of this scratchpad. </p>
+<p>Creates an independent copy of all internal state, including active species and reactions. The clone can be modified without affecting the original.</p>
+<dl class="section return"><dt>Returns</dt><dd>A unique pointer to the cloned scratchpad.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><span class="keyword">auto</span> original = std::make_unique&lt;AdaptiveEngineViewScratchPad&gt;();</div>
+<div class="line">original-&gt;initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create independent copy for a worker thread</span></div>
+<div class="line"><span class="keyword">auto</span> worker_copy = original-&gt;clone();</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+</div><!-- fragment --> </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<a id="a8fc25bac8529777504a206fc9fa2a5d6" name="a8fc25bac8529777504a206fc9fa2a5d6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8fc25bac8529777504a206fc9fa2a5d6">&#9670;&#160;</a></span>initialize()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::engine::scratch::AdaptiveEngineViewScratchPad::initialize </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">AdaptiveEngineView</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Initialize the scratchpad from an <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a>. </p>
+<p>Clears any existing state and prepares the scratchpad for use. This method is idempotent; calling it multiple times has no effect after the first successful initialization.</p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">engine</td><td>The <a class="el" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html" title="An engine view that dynamically adapts the reaction network based on runtime conditions.">AdaptiveEngineView</a> to initialize from.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">AdaptiveEngineViewScratchPad</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>;</div>
+<div class="line"><a class="code hl_class" href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">AdaptiveEngineView</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a> = create_engine();</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_adaptive_engine_view_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1_adaptive_engine_view.html">gridfire::engine::AdaptiveEngineView</a></div><div class="ttdoc">An engine view that dynamically adapts the reaction network based on runtime conditions.</div><div class="ttdef"><b>Definition</b> engine_adaptive.h:50</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for storing working memory used by AdaptiveEngineView computations.</div><div class="ttdef"><b>Definition</b> engine_adaptive_scratchpad.h:66</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="a2ad134e1451dc0b5544f293d142c8c71" name="a2ad134e1451dc0b5544f293d142c8c71"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2ad134e1451dc0b5544f293d142c8c71">&#9670;&#160;</a></span>is_initialized()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::AdaptiveEngineViewScratchPad::is_initialized </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Check whether the scratchpad has been initialized. </p>
+<dl class="section return"><dt>Returns</dt><dd>true if initialized, false otherwise. </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#a1ee6453778d15be0b6dc546f1e5e4768">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a5ece8be9ba2be39aae7ca77ff869a539" name="a5ece8be9ba2be39aae7ca77ff869a539"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5ece8be9ba2be39aae7ca77ff869a539">&#9670;&#160;</a></span>active_reactions</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> gridfire::engine::scratch::AdaptiveEngineViewScratchPad::active_reactions</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Set of reactions currently active in the adaptive network. </p>
+
+</div>
+</div>
+<a id="acedd3559de9a91a14f8ddfbf14897d9c" name="acedd3559de9a91a14f8ddfbf14897d9c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acedd3559de9a91a14f8ddfbf14897d9c">&#9670;&#160;</a></span>active_species</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;fourdst::atomic::Species&gt; gridfire::engine::scratch::AdaptiveEngineViewScratchPad::active_species</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Vector of species currently active in the adaptive network. </p>
+
+</div>
+</div>
+<a id="a1e21ec9fcd89cc3af2a93d7105fd95d5" name="a1e21ec9fcd89cc3af2a93d7105fd95d5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1e21ec9fcd89cc3af2a93d7105fd95d5">&#9670;&#160;</a></span>has_initialized</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::AdaptiveEngineViewScratchPad::has_initialized = false</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Flag indicating whether the scratchpad has been initialized. </p>
+
+</div>
+</div>
+<a id="a5a8a4b9c10bc56bb341842d4f9aee2ea" name="a5a8a4b9c10bc56bb341842d4f9aee2ea"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5a8a4b9c10bc56bb341842d4f9aee2ea">&#9670;&#160;</a></span>ID</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">auto gridfire::engine::scratch::AdaptiveEngineViewScratchPad::ID = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea7ea429f895ad8257bbf75dc52312d999">ScratchPadType::ADAPTIVE_ENGINE_VIEW_SCRATCHPAD</a></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Unique identifier for this scratchpad type. </p>
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine__adaptive__scratchpad_8h.html">engine_adaptive_scratchpad.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine.html">engine</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a></li><li class="navelem"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">AdaptiveEngineViewScratchPad</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+
+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::DefinedEngineViewScratchPad Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#aa246422067f2b9e1aeed5a20d0ff3771">active_reactions</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a20a1293b8d217a2c78c64c4da2976103">active_species</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a9db3bdc69b6c2911d7aeb893e97f9e7a">active_species_vector_cache</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#ae6c007066aee6807530c8611e717024d">clone</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a27dc58c422ed8613433b8e9377f1a55a">has_initialized</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a234276ada5e59ca7c312bd95f5b733a2">ID</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a8820a147ba891c656dea16b3dd2d20da">is_initialized</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a95b8528f60ca591bb9d8833e68cd6924">reaction_index_map</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html#a05c0fe3d8e07eabff28b719e7565fccb">species_index_map</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
+</div><!-- doc-content -->
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diff --git a/docs/html/structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html b/docs/html/structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html
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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+<title>GridFire: gridfire::engine::scratch::DefinedEngineViewScratchPad Struct Reference</title>
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
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+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="#pub-static-attribs">Static Public Attributes</a> &#124;
+<a href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::DefinedEngineViewScratchPad Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad for storing working memory used by defined reaction network engines.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;engine_defined_scratchpad.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::engine::scratch::DefinedEngineViewScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad__inherit__graph.svg" width="223" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::engine::scratch::DefinedEngineViewScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad__coll__graph.svg" width="100%" height="517"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a8820a147ba891c656dea16b3dd2d20da" id="r_a8820a147ba891c656dea16b3dd2d20da"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8820a147ba891c656dea16b3dd2d20da">is_initialized</a> () const override</td></tr>
+<tr class="memdesc:a8820a147ba891c656dea16b3dd2d20da"><td class="mdescLeft">&#160;</td><td class="mdescRight">Check whether the scratchpad has been initialized.  <br /></td></tr>
+<tr class="separator:a8820a147ba891c656dea16b3dd2d20da"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ae6c007066aee6807530c8611e717024d" id="r_ae6c007066aee6807530c8611e717024d"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae6c007066aee6807530c8611e717024d">clone</a> () const override</td></tr>
+<tr class="memdesc:ae6c007066aee6807530c8611e717024d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Create a deep copy of this scratchpad.  <br /></td></tr>
+<tr class="separator:ae6c007066aee6807530c8611e717024d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td></tr>
+<tr class="memitem:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad" id="r_ac972e0fa19ff7623a6f0f8aedc5e174b"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a> ()=default</td></tr>
+<tr class="memdesc:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor for proper cleanup of derived classes.  <br /></td></tr>
+<tr class="separator:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a27dc58c422ed8613433b8e9377f1a55a" id="r_a27dc58c422ed8613433b8e9377f1a55a"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a27dc58c422ed8613433b8e9377f1a55a">has_initialized</a> = true</td></tr>
+<tr class="memdesc:a27dc58c422ed8613433b8e9377f1a55a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Flag indicating whether the scratchpad is initialized (default: true).  <br /></td></tr>
+<tr class="separator:a27dc58c422ed8613433b8e9377f1a55a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a20a1293b8d217a2c78c64c4da2976103" id="r_a20a1293b8d217a2c78c64c4da2976103"><td class="memItemLeft" align="right" valign="top">std::set&lt; fourdst::atomic::Species &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a20a1293b8d217a2c78c64c4da2976103">active_species</a></td></tr>
+<tr class="memdesc:a20a1293b8d217a2c78c64c4da2976103"><td class="mdescLeft">&#160;</td><td class="mdescRight">Set of species active in the defined network.  <br /></td></tr>
+<tr class="separator:a20a1293b8d217a2c78c64c4da2976103"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa246422067f2b9e1aeed5a20d0ff3771" id="r_aa246422067f2b9e1aeed5a20d0ff3771"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa246422067f2b9e1aeed5a20d0ff3771">active_reactions</a></td></tr>
+<tr class="memdesc:aa246422067f2b9e1aeed5a20d0ff3771"><td class="mdescLeft">&#160;</td><td class="mdescRight">Set of reactions active in the defined network.  <br /></td></tr>
+<tr class="separator:aa246422067f2b9e1aeed5a20d0ff3771"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a05c0fe3d8e07eabff28b719e7565fccb" id="r_a05c0fe3d8e07eabff28b719e7565fccb"><td class="memItemLeft" align="right" valign="top">std::vector&lt; size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a05c0fe3d8e07eabff28b719e7565fccb">species_index_map</a></td></tr>
+<tr class="memdesc:a05c0fe3d8e07eabff28b719e7565fccb"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mapping from local indices to global species indices.  <br /></td></tr>
+<tr class="separator:a05c0fe3d8e07eabff28b719e7565fccb"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a95b8528f60ca591bb9d8833e68cd6924" id="r_a95b8528f60ca591bb9d8833e68cd6924"><td class="memItemLeft" align="right" valign="top">std::vector&lt; size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a95b8528f60ca591bb9d8833e68cd6924">reaction_index_map</a></td></tr>
+<tr class="memdesc:a95b8528f60ca591bb9d8833e68cd6924"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mapping from local indices to global reaction indices.  <br /></td></tr>
+<tr class="separator:a95b8528f60ca591bb9d8833e68cd6924"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a9db3bdc69b6c2911d7aeb893e97f9e7a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cached vector of active species for performance optimization.  <br /></td></tr>
+<tr class="separator:a9db3bdc69b6c2911d7aeb893e97f9e7a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-static-attribs" name="pub-static-attribs"></a>
+Static Public Attributes</h2></td></tr>
+<tr class="memitem:a234276ada5e59ca7c312bd95f5b733a2" id="r_a234276ada5e59ca7c312bd95f5b733a2"><td class="memItemLeft" align="right" valign="top">static constexpr auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a234276ada5e59ca7c312bd95f5b733a2">ID</a> = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bead249b18ecc73b7531c3b609272989f04">ScratchPadType::DEFINED_ENGINE_VIEW_SCRATCHPAD</a></td></tr>
+<tr class="memdesc:a234276ada5e59ca7c312bd95f5b733a2"><td class="mdescLeft">&#160;</td><td class="mdescRight">Unique identifier for this scratchpad type.  <br /></td></tr>
+<tr class="separator:a234276ada5e59ca7c312bd95f5b733a2"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad for storing working memory used by defined reaction network engines. </p>
+<p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html" title="Scratchpad for storing working memory used by defined reaction network engines.">DefinedEngineViewScratchPad</a> provides storage for species and reaction data in engines with statically defined reaction networks. It includes index mappings for efficient lookups and an optional cache for the active species vector.</p>
+<p>Unlike adaptive scratchpads, the defined scratchpad is considered initialized by default (has_initialized = true), as the network structure is known at construction time.</p>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. Each thread should operate on its own independent instance. Use <a class="el" href="#ae6c007066aee6807530c8611e717024d" title="Create a deep copy of this scratchpad.">clone()</a> to create copies for parallel execution. </dd></dl>
+</div><h2 class="groupheader">Member Function Documentation</h2>
+<a id="ae6c007066aee6807530c8611e717024d" name="ae6c007066aee6807530c8611e717024d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae6c007066aee6807530c8611e717024d">&#9670;&#160;</a></span>clone()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt; gridfire::engine::scratch::DefinedEngineViewScratchPad::clone </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Create a deep copy of this scratchpad. </p>
+<p>Creates an independent copy of all internal state, including active species, reactions, index mappings, and the species vector cache. The clone can be modified without affecting the original.</p>
+<dl class="section return"><dt>Returns</dt><dd>A unique pointer to the cloned scratchpad.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">DefinedEngineViewScratchPad</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>;</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.active_species.insert(species);</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.species_index_map = {0, 1, 2};</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create independent copy for a worker thread</span></div>
+<div class="line"><span class="keyword">auto</span> worker_copy = <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.clone();</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for storing working memory used by defined reaction network engines.</div><div class="ttdef"><b>Definition</b> engine_defined_scratchpad.h:80</div></div>
+</div><!-- fragment --> </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<a id="a8820a147ba891c656dea16b3dd2d20da" name="a8820a147ba891c656dea16b3dd2d20da"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8820a147ba891c656dea16b3dd2d20da">&#9670;&#160;</a></span>is_initialized()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::DefinedEngineViewScratchPad::is_initialized </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Check whether the scratchpad has been initialized. </p>
+<dl class="section return"><dt>Returns</dt><dd>true if initialized (always true by default for defined networks). </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#a1ee6453778d15be0b6dc546f1e5e4768">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="aa246422067f2b9e1aeed5a20d0ff3771" name="aa246422067f2b9e1aeed5a20d0ff3771"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa246422067f2b9e1aeed5a20d0ff3771">&#9670;&#160;</a></span>active_reactions</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">reaction::ReactionSet</a> gridfire::engine::scratch::DefinedEngineViewScratchPad::active_reactions</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Set of reactions active in the defined network. </p>
+
+</div>
+</div>
+<a id="a20a1293b8d217a2c78c64c4da2976103" name="a20a1293b8d217a2c78c64c4da2976103"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a20a1293b8d217a2c78c64c4da2976103">&#9670;&#160;</a></span>active_species</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::set&lt;fourdst::atomic::Species&gt; gridfire::engine::scratch::DefinedEngineViewScratchPad::active_species</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Set of species active in the defined network. </p>
+
+</div>
+</div>
+<a id="a9db3bdc69b6c2911d7aeb893e97f9e7a" name="a9db3bdc69b6c2911d7aeb893e97f9e7a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9db3bdc69b6c2911d7aeb893e97f9e7a">&#9670;&#160;</a></span>active_species_vector_cache</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;std::vector&lt;fourdst::atomic::Species&gt; &gt; gridfire::engine::scratch::DefinedEngineViewScratchPad::active_species_vector_cache = std::nullopt</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Cached vector of active species for performance optimization. </p>
+<p>This optional cache avoids repeated conversion from set to vector. </p>
+
+</div>
+</div>
+<a id="a27dc58c422ed8613433b8e9377f1a55a" name="a27dc58c422ed8613433b8e9377f1a55a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a27dc58c422ed8613433b8e9377f1a55a">&#9670;&#160;</a></span>has_initialized</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::DefinedEngineViewScratchPad::has_initialized = true</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Flag indicating whether the scratchpad is initialized (default: true). </p>
+
+</div>
+</div>
+<a id="a234276ada5e59ca7c312bd95f5b733a2" name="a234276ada5e59ca7c312bd95f5b733a2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a234276ada5e59ca7c312bd95f5b733a2">&#9670;&#160;</a></span>ID</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">auto gridfire::engine::scratch::DefinedEngineViewScratchPad::ID = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bead249b18ecc73b7531c3b609272989f04">ScratchPadType::DEFINED_ENGINE_VIEW_SCRATCHPAD</a></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Unique identifier for this scratchpad type. </p>
+
+</div>
+</div>
+<a id="a95b8528f60ca591bb9d8833e68cd6924" name="a95b8528f60ca591bb9d8833e68cd6924"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a95b8528f60ca591bb9d8833e68cd6924">&#9670;&#160;</a></span>reaction_index_map</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;size_t&gt; gridfire::engine::scratch::DefinedEngineViewScratchPad::reaction_index_map</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Mapping from local indices to global reaction indices. </p>
+
+</div>
+</div>
+<a id="a05c0fe3d8e07eabff28b719e7565fccb" name="a05c0fe3d8e07eabff28b719e7565fccb"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a05c0fe3d8e07eabff28b719e7565fccb">&#9670;&#160;</a></span>species_index_map</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;size_t&gt; gridfire::engine::scratch::DefinedEngineViewScratchPad::species_index_map</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Mapping from local indices to global species indices. </p>
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine__defined__scratchpad_8h.html">engine_defined_scratchpad.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine.html">engine</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a></li><li class="navelem"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">DefinedEngineViewScratchPad</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
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+];
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
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+<!-- Generated by Doxygen 1.13.2 -->
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::GraphEngineScratchPad Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a>, including all inherited members.</p>
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+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af5e973d248aea4af2baedd64a5a396f1">ADFunRegistrationResult</a> enum name</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aa5ececd1fb07a0aabb662c42dcb824b5">clone</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ab1bc25e2aef7ac5a886811db9173f440">has_initialized</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aeebd0f52a1d433864e30af093684f353">ID</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#adcd7fe8dfb789527428a868e646053ca">initialize</a>(const GraphEngine &amp;engine)</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ac31f77dafaa622ad33496a451caca1ba">is_initialized</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#a880842c920f730a70b11fef372e267c0">jac_work</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#acf12f4a0a11a2078365f6f5d3133f3ca">jacobianSubsetCache</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#a1f9875b88274f94d11299b633c013e1e">jacWorkCache</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#afe0786c5a0a72b48c3597406fedbdb9c">local_abundance_cache</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#a78e01ce42f453f050d6aca21eb654475">most_recent_rhs_calculation</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af484620a6c7022af3e0775bfa2568f79">rhsADFun</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#abcadc5999eabeb91cc45887323da5cc1">stepDerivativesCache</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-types">Public Types</a> &#124;
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="#pub-static-attribs">Static Public Attributes</a> &#124;
+<a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::GraphEngineScratchPad Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad for storing CppAD automatic differentiation state for <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a>.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;engine_graph_scratchpad.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::engine::scratch::GraphEngineScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad__inherit__graph.svg" width="183" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::engine::scratch::GraphEngineScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad__coll__graph.svg" width="100%" height="577"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-types" name="pub-types"></a>
+Public Types</h2></td></tr>
+<tr class="memitem:af5e973d248aea4af2baedd64a5a396f1" id="r_af5e973d248aea4af2baedd64a5a396f1"><td class="memItemLeft" align="right" valign="top">enum class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af5e973d248aea4af2baedd64a5a396f1">ADFunRegistrationResult</a> : uint8_t { <a class="el" href="#af5e973d248aea4af2baedd64a5a396f1ad0749aaba8b833466dfcbb0428e4f89c">SUCCESS</a>
+, <a class="el" href="#af5e973d248aea4af2baedd64a5a396f1a2ed29473219607b1b8c2d77f28b1df5c">ALREADY_REGISTERED</a>
+ }</td></tr>
+<tr class="memdesc:af5e973d248aea4af2baedd64a5a396f1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Result codes for ADFun registration operations.  <a href="#af5e973d248aea4af2baedd64a5a396f1">More...</a><br /></td></tr>
+<tr class="separator:af5e973d248aea4af2baedd64a5a396f1"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:ac31f77dafaa622ad33496a451caca1ba" id="r_ac31f77dafaa622ad33496a451caca1ba"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac31f77dafaa622ad33496a451caca1ba">is_initialized</a> () const override</td></tr>
+<tr class="memdesc:ac31f77dafaa622ad33496a451caca1ba"><td class="mdescLeft">&#160;</td><td class="mdescRight">Check whether the scratchpad has been initialized.  <br /></td></tr>
+<tr class="separator:ac31f77dafaa622ad33496a451caca1ba"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:adcd7fe8dfb789527428a868e646053ca" id="r_adcd7fe8dfb789527428a868e646053ca"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#adcd7fe8dfb789527428a868e646053ca">initialize</a> (const <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> &amp;engine)</td></tr>
+<tr class="memdesc:adcd7fe8dfb789527428a868e646053ca"><td class="mdescLeft">&#160;</td><td class="mdescRight">Initialize the scratchpad from a <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a>.  <br /></td></tr>
+<tr class="separator:adcd7fe8dfb789527428a868e646053ca"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa5ececd1fb07a0aabb662c42dcb824b5" id="r_aa5ececd1fb07a0aabb662c42dcb824b5"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa5ececd1fb07a0aabb662c42dcb824b5">clone</a> () const override</td></tr>
+<tr class="memdesc:aa5ececd1fb07a0aabb662c42dcb824b5"><td class="mdescLeft">&#160;</td><td class="mdescRight">Create a deep copy of this scratchpad.  <br /></td></tr>
+<tr class="separator:aa5ececd1fb07a0aabb662c42dcb824b5"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td></tr>
+<tr class="memitem:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad" id="r_ac972e0fa19ff7623a6f0f8aedc5e174b"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a> ()=default</td></tr>
+<tr class="memdesc:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor for proper cleanup of derived classes.  <br /></td></tr>
+<tr class="separator:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:af484620a6c7022af3e0775bfa2568f79" id="r_af484620a6c7022af3e0775bfa2568f79"><td class="memItemLeft" align="right" valign="top">std::optional&lt; CppAD::ADFun&lt; double &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af484620a6c7022af3e0775bfa2568f79">rhsADFun</a></td></tr>
+<tr class="memdesc:af484620a6c7022af3e0775bfa2568f79"><td class="mdescLeft">&#160;</td><td class="mdescRight">CppAD function object for evaluating the ODE right-hand side.  <br /></td></tr>
+<tr class="separator:af484620a6c7022af3e0775bfa2568f79"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a880842c920f730a70b11fef372e267c0" id="r_a880842c920f730a70b11fef372e267c0"><td class="memItemLeft" align="right" valign="top">CppAD::sparse_jac_work&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a880842c920f730a70b11fef372e267c0">jac_work</a></td></tr>
+<tr class="memdesc:a880842c920f730a70b11fef372e267c0"><td class="mdescLeft">&#160;</td><td class="mdescRight">Work structure for sparse Jacobian calculations.  <br /></td></tr>
+<tr class="separator:a880842c920f730a70b11fef372e267c0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afe0786c5a0a72b48c3597406fedbdb9c" id="r_afe0786c5a0a72b48c3597406fedbdb9c"><td class="memItemLeft" align="right" valign="top">std::vector&lt; double &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#afe0786c5a0a72b48c3597406fedbdb9c">local_abundance_cache</a></td></tr>
+<tr class="memdesc:afe0786c5a0a72b48c3597406fedbdb9c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Local cache of abundance values for efficient RHS evaluation.  <br /></td></tr>
+<tr class="separator:afe0786c5a0a72b48c3597406fedbdb9c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:abcadc5999eabeb91cc45887323da5cc1" id="r_abcadc5999eabeb91cc45887323da5cc1"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; size_t, <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#abcadc5999eabeb91cc45887323da5cc1">stepDerivativesCache</a></td></tr>
+<tr class="memdesc:abcadc5999eabeb91cc45887323da5cc1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cache of step derivatives indexed by timestep identifier.  <br /></td></tr>
+<tr class="separator:abcadc5999eabeb91cc45887323da5cc1"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:acf12f4a0a11a2078365f6f5d3133f3ca" id="r_acf12f4a0a11a2078365f6f5d3133f3ca"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; size_t, CppAD::sparse_rcv&lt; std::vector&lt; size_t &gt;, std::vector&lt; double &gt; &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#acf12f4a0a11a2078365f6f5d3133f3ca">jacobianSubsetCache</a></td></tr>
+<tr class="memdesc:acf12f4a0a11a2078365f6f5d3133f3ca"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cache of sparse Jacobian subsets indexed by timestep identifier.  <br /></td></tr>
+<tr class="separator:acf12f4a0a11a2078365f6f5d3133f3ca"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a1f9875b88274f94d11299b633c013e1e" id="r_a1f9875b88274f94d11299b633c013e1e"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; size_t, CppAD::sparse_jac_work &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1f9875b88274f94d11299b633c013e1e">jacWorkCache</a></td></tr>
+<tr class="memdesc:a1f9875b88274f94d11299b633c013e1e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cache of Jacobian work structures indexed by timestep identifier.  <br /></td></tr>
+<tr class="separator:a1f9875b88274f94d11299b633c013e1e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a78e01ce42f453f050d6aca21eb654475" id="r_a78e01ce42f453f050d6aca21eb654475"><td class="memItemLeft" align="right" valign="top">std::optional&lt; <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt; double &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a78e01ce42f453f050d6aca21eb654475">most_recent_rhs_calculation</a></td></tr>
+<tr class="memdesc:a78e01ce42f453f050d6aca21eb654475"><td class="mdescLeft">&#160;</td><td class="mdescRight">The most recent RHS calculation result for warm-starting.  <br /></td></tr>
+<tr class="separator:a78e01ce42f453f050d6aca21eb654475"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab1bc25e2aef7ac5a886811db9173f440" id="r_ab1bc25e2aef7ac5a886811db9173f440"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab1bc25e2aef7ac5a886811db9173f440">has_initialized</a> = false</td></tr>
+<tr class="memdesc:ab1bc25e2aef7ac5a886811db9173f440"><td class="mdescLeft">&#160;</td><td class="mdescRight">Flag indicating whether the scratchpad has been initialized.  <br /></td></tr>
+<tr class="separator:ab1bc25e2aef7ac5a886811db9173f440"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-static-attribs" name="pub-static-attribs"></a>
+Static Public Attributes</h2></td></tr>
+<tr class="memitem:aeebd0f52a1d433864e30af093684f353" id="r_aeebd0f52a1d433864e30af093684f353"><td class="memItemLeft" align="right" valign="top">static constexpr auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aeebd0f52a1d433864e30af093684f353">ID</a> = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a></td></tr>
+<tr class="memdesc:aeebd0f52a1d433864e30af093684f353"><td class="mdescLeft">&#160;</td><td class="mdescRight">Unique identifier for this scratchpad type.  <br /></td></tr>
+<tr class="separator:aeebd0f52a1d433864e30af093684f353"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad for storing CppAD automatic differentiation state for <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a>. </p>
+<p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html" title="Scratchpad for storing CppAD automatic differentiation state for GraphEngine.">GraphEngineScratchPad</a> provides thread-local storage for all CppAD-related objects needed during ODE integration with the <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a>. This includes the ADFun object for evaluating the right-hand side of the ODE and computing Jacobians, as well as various caches to improve performance.</p>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. CppAD ADFun objects maintain internal state that is modified during Forward and Reverse mode operations. Each thread must have its own scratchpad instance. Use <a class="el" href="#aa5ececd1fb07a0aabb662c42dcb824b5" title="Create a deep copy of this scratchpad.">clone()</a> to create independent copies for parallel execution.</dd></dl>
+<dl class="section note"><dt>Note</dt><dd>When cloning, if the rhsADFun has not been initialized, the clone will also be uninitialized and has_initialized will be false. </dd></dl>
+</div><h2 class="groupheader">Member Enumeration Documentation</h2>
+<a id="af5e973d248aea4af2baedd64a5a396f1" name="af5e973d248aea4af2baedd64a5a396f1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af5e973d248aea4af2baedd64a5a396f1">&#9670;&#160;</a></span>ADFunRegistrationResult</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">enum class <a class="el" href="#af5e973d248aea4af2baedd64a5a396f1">gridfire::engine::scratch::GraphEngineScratchPad::ADFunRegistrationResult</a> : uint8_t</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel strong">strong</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Result codes for ADFun registration operations. </p>
+<table class="fieldtable">
+<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><a id="af5e973d248aea4af2baedd64a5a396f1ad0749aaba8b833466dfcbb0428e4f89c" name="af5e973d248aea4af2baedd64a5a396f1ad0749aaba8b833466dfcbb0428e4f89c"></a>SUCCESS&#160;</td><td class="fielddoc"><p>Registration completed successfully. </p>
+</td></tr>
+<tr><td class="fieldname"><a id="af5e973d248aea4af2baedd64a5a396f1a2ed29473219607b1b8c2d77f28b1df5c" name="af5e973d248aea4af2baedd64a5a396f1a2ed29473219607b1b8c2d77f28b1df5c"></a>ALREADY_REGISTERED&#160;</td><td class="fielddoc"><p>ADFun was already registered; no action taken. </p>
+</td></tr>
+</table>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="aa5ececd1fb07a0aabb662c42dcb824b5" name="aa5ececd1fb07a0aabb662c42dcb824b5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa5ececd1fb07a0aabb662c42dcb824b5">&#9670;&#160;</a></span>clone()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt; gridfire::engine::scratch::GraphEngineScratchPad::clone </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Create a deep copy of this scratchpad. </p>
+<p>Creates an independent copy of all internal state, including the CppAD ADFun object and all caches. The clone can be safely used in a separate thread without affecting the original.</p>
+<dl class="section return"><dt>Returns</dt><dd>A unique pointer to the cloned scratchpad.</dd></dl>
+<dl class="section note"><dt>Note</dt><dd>If rhsADFun is not initialized, the clone will also be uninitialized (has_initialized = false).</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>;</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Create independent copies for parallel workers</span></div>
+<div class="line">std::vector&lt;std::unique_ptr&lt;AbstractScratchPad&gt;&gt; worker_pads;</div>
+<div class="line"><span class="keywordflow">for</span> (<span class="keywordtype">int</span> i = 0; i &lt; num_threads; ++i) {</div>
+<div class="line">    worker_pads.push_back(<a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.clone());</div>
+<div class="line">}</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="anamespacegridfire_1_1engine_html"><div class="ttname"><a href="namespacegridfire_1_1engine.html">gridfire::engine</a></div><div class="ttdef"><b>Definition</b> dynamic_engine_diagnostics.h:39</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a></div><div class="ttdoc">Scratchpad for storing CppAD automatic differentiation state for GraphEngine.</div><div class="ttdef"><b>Definition</b> engine_graph_scratchpad.h:83</div></div>
+</div><!-- fragment --> </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<a id="adcd7fe8dfb789527428a868e646053ca" name="adcd7fe8dfb789527428a868e646053ca"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adcd7fe8dfb789527428a868e646053ca">&#9670;&#160;</a></span>initialize()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::engine::scratch::GraphEngineScratchPad::initialize </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Initialize the scratchpad from a <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a>. </p>
+<p>Copies the authoritative ADFun from the engine and clears all caches. This method is idempotent; calling it multiple times has no effect after the first successful initialization.</p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">engine</td><td>The <a class="el" href="classgridfire_1_1engine_1_1_graph_engine.html" title="A reaction network engine that uses a graph-based representation.">GraphEngine</a> to initialize from.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>;</div>
+<div class="line"><a class="code hl_class" href="classgridfire_1_1engine_1_1_graph_engine.html">GraphEngine</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a> = create_engine();</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.initialize(<a class="code hl_namespace" href="namespacegridfire_1_1engine.html">engine</a>);</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Now safe to use for thread-local computations</span></div>
+<div class="line"><span class="keyword">auto</span>&amp; adfun = <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.rhsADFun.value();</div>
+<div class="ttc" id="aclassgridfire_1_1engine_1_1_graph_engine_html"><div class="ttname"><a href="classgridfire_1_1engine_1_1_graph_engine.html">gridfire::engine::GraphEngine</a></div><div class="ttdoc">A reaction network engine that uses a graph-based representation.</div><div class="ttdef"><b>Definition</b> engine_graph.h:100</div></div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="ac31f77dafaa622ad33496a451caca1ba" name="ac31f77dafaa622ad33496a451caca1ba"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac31f77dafaa622ad33496a451caca1ba">&#9670;&#160;</a></span>is_initialized()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::GraphEngineScratchPad::is_initialized </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Check whether the scratchpad has been initialized. </p>
+<dl class="section return"><dt>Returns</dt><dd>true if initialized with a valid ADFun, false otherwise. </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#a1ee6453778d15be0b6dc546f1e5e4768">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="ab1bc25e2aef7ac5a886811db9173f440" name="ab1bc25e2aef7ac5a886811db9173f440"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab1bc25e2aef7ac5a886811db9173f440">&#9670;&#160;</a></span>has_initialized</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::GraphEngineScratchPad::has_initialized = false</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Flag indicating whether the scratchpad has been initialized. </p>
+
+</div>
+</div>
+<a id="aeebd0f52a1d433864e30af093684f353" name="aeebd0f52a1d433864e30af093684f353"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aeebd0f52a1d433864e30af093684f353">&#9670;&#160;</a></span>ID</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">auto gridfire::engine::scratch::GraphEngineScratchPad::ID = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea979fbf2c36e2a27005d241a7d27eb723">ScratchPadType::GRAPH_ENGINE_SCRATCHPAD</a></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Unique identifier for this scratchpad type. </p>
+
+</div>
+</div>
+<a id="a880842c920f730a70b11fef372e267c0" name="a880842c920f730a70b11fef372e267c0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a880842c920f730a70b11fef372e267c0">&#9670;&#160;</a></span>jac_work</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">CppAD::sparse_jac_work gridfire::engine::scratch::GraphEngineScratchPad::jac_work</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Work structure for sparse Jacobian calculations. </p>
+<p>Reused across Jacobian evaluations to avoid reallocation. </p>
+
+</div>
+</div>
+<a id="acf12f4a0a11a2078365f6f5d3133f3ca" name="acf12f4a0a11a2078365f6f5d3133f3ca"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acf12f4a0a11a2078365f6f5d3133f3ca">&#9670;&#160;</a></span>jacobianSubsetCache</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unordered_map&lt;size_t, CppAD::sparse_rcv&lt;std::vector&lt;size_t&gt;, std::vector&lt;double&gt; &gt; &gt; gridfire::engine::scratch::GraphEngineScratchPad::jacobianSubsetCache</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Cache of sparse Jacobian subsets indexed by timestep identifier. </p>
+
+</div>
+</div>
+<a id="a1f9875b88274f94d11299b633c013e1e" name="a1f9875b88274f94d11299b633c013e1e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1f9875b88274f94d11299b633c013e1e">&#9670;&#160;</a></span>jacWorkCache</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unordered_map&lt;size_t, CppAD::sparse_jac_work&gt; gridfire::engine::scratch::GraphEngineScratchPad::jacWorkCache</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Cache of Jacobian work structures indexed by timestep identifier. </p>
+
+</div>
+</div>
+<a id="afe0786c5a0a72b48c3597406fedbdb9c" name="afe0786c5a0a72b48c3597406fedbdb9c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afe0786c5a0a72b48c3597406fedbdb9c">&#9670;&#160;</a></span>local_abundance_cache</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;double&gt; gridfire::engine::scratch::GraphEngineScratchPad::local_abundance_cache</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Local cache of abundance values for efficient RHS evaluation. </p>
+
+</div>
+</div>
+<a id="a78e01ce42f453f050d6aca21eb654475" name="a78e01ce42f453f050d6aca21eb654475"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a78e01ce42f453f050d6aca21eb654475">&#9670;&#160;</a></span>most_recent_rhs_calculation</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;<a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt;double&gt; &gt; gridfire::engine::scratch::GraphEngineScratchPad::most_recent_rhs_calculation</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>The most recent RHS calculation result for warm-starting. </p>
+
+</div>
+</div>
+<a id="af484620a6c7022af3e0775bfa2568f79" name="af484620a6c7022af3e0775bfa2568f79"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af484620a6c7022af3e0775bfa2568f79">&#9670;&#160;</a></span>rhsADFun</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;CppAD::ADFun&lt;double&gt; &gt; gridfire::engine::scratch::GraphEngineScratchPad::rhsADFun</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>CppAD function object for evaluating the ODE right-hand side. </p>
+<p>Contains the computational graph for automatic differentiation. </p>
+
+</div>
+</div>
+<a id="abcadc5999eabeb91cc45887323da5cc1" name="abcadc5999eabeb91cc45887323da5cc1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abcadc5999eabeb91cc45887323da5cc1">&#9670;&#160;</a></span>stepDerivativesCache</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unordered_map&lt;size_t, <a class="el" href="structgridfire_1_1engine_1_1_step_derivatives.html">StepDerivatives</a>&lt;double&gt; &gt; gridfire::engine::scratch::GraphEngineScratchPad::stepDerivativesCache</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Cache of step derivatives indexed by timestep identifier. </p>
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine__graph__scratchpad_8h.html">engine_graph_scratchpad.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine.html">engine</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a></li><li class="navelem"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">GraphEngineScratchPad</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
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+var structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad =
+[
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+      [ "ALREADY_REGISTERED", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af5e973d248aea4af2baedd64a5a396f1a2ed29473219607b1b8c2d77f28b1df5c", null ]
+    ] ],
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+    [ "initialize", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#adcd7fe8dfb789527428a868e646053ca", null ],
+    [ "is_initialized", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ac31f77dafaa622ad33496a451caca1ba", null ],
+    [ "has_initialized", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#ab1bc25e2aef7ac5a886811db9173f440", null ],
+    [ "ID", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#aeebd0f52a1d433864e30af093684f353", null ],
+    [ "jac_work", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#a880842c920f730a70b11fef372e267c0", null ],
+    [ "jacobianSubsetCache", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#acf12f4a0a11a2078365f6f5d3133f3ca", null ],
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+    [ "local_abundance_cache", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#afe0786c5a0a72b48c3597406fedbdb9c", null ],
+    [ "most_recent_rhs_calculation", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#a78e01ce42f453f050d6aca21eb654475", null ],
+    [ "rhsADFun", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#af484620a6c7022af3e0775bfa2568f79", null ],
+    [ "stepDerivativesCache", "structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html#abcadc5999eabeb91cc45887323da5cc1", null ]
+];
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a07552ac293e905112014c421ea15eb2f">algebraic_species</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a7dbce2e9a2f940cbde8888aa67f5f3aa">clone</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a2e02493490755a799f7dbc3322780c63">composition_cache</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a38ea81d9d616cd0f74747e44948f4ab9">dynamic_species</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a95836c7415ca6598185a612e0677ee89">flux_coupling_threshold</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a3c44438f2b807451a0ac56a2b57900b6">has_initialized</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a0200b3fd40de5691f3c3f821a864f9f0">ID</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a97f1fffc38872df3edd8c681685aa1fc">initialize</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ae61c7a93f9d4f8ded1e9c9dd2221d864">is_initialized</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a617d7bcbc77a8004fd75a35bf1bdad45">qse_groups</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ab0a22916cd4f6c18f303558efe077aff">qse_solvers</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#ad81d359207946b3955fc59c78fd7d4f4">QSEGroup</a> typedef</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a3b472db4b4723d3a1c87220144cc9b35">QSESolver</a> typedef</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a636e76d1c67cf412d92461590daa7dbe">Species</a> typedef</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#a735335d563bb612f19b531107c89fab6">sun_ctx</a></td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html#abf68ba962db96f054285ef6ba06070a1">~MultiscalePartitioningEngineViewScratchPad</a>() override</td><td class="entry"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
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diff --git a/docs/html/structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html b/docs/html/structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+<div class="header">
+  <div class="summary">
+<a href="#pub-types">Public Types</a> &#124;
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="#pub-static-attribs">Static Public Attributes</a> &#124;
+<a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>Scratchpad for multiscale partitioning engine computations with QSE groups.  
+ <a href="#details">More...</a></p>
+
+<p><code>#include &lt;engine_multiscale_scratchpad.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad__inherit__graph.svg" width="204" height="155"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad__coll__graph.svg" width="100%" height="566"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-types" name="pub-types"></a>
+Public Types</h2></td></tr>
+<tr class="memitem:ad81d359207946b3955fc59c78fd7d4f4" id="r_ad81d359207946b3955fc59c78fd7d4f4"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad81d359207946b3955fc59c78fd7d4f4">QSEGroup</a> = <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">MultiscalePartitioningEngineView::QSEGroup</a></td></tr>
+<tr class="memdesc:ad81d359207946b3955fc59c78fd7d4f4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Type alias for QSE group from the multiscale engine view.  <br /></td></tr>
+<tr class="separator:ad81d359207946b3955fc59c78fd7d4f4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3b472db4b4723d3a1c87220144cc9b35" id="r_a3b472db4b4723d3a1c87220144cc9b35"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3b472db4b4723d3a1c87220144cc9b35">QSESolver</a> = <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">MultiscalePartitioningEngineView::QSESolver</a></td></tr>
+<tr class="memdesc:a3b472db4b4723d3a1c87220144cc9b35"><td class="mdescLeft">&#160;</td><td class="mdescRight">Type alias for QSE solver from the multiscale engine view.  <br /></td></tr>
+<tr class="separator:a3b472db4b4723d3a1c87220144cc9b35"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a636e76d1c67cf412d92461590daa7dbe" id="r_a636e76d1c67cf412d92461590daa7dbe"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a636e76d1c67cf412d92461590daa7dbe">Species</a> = fourdst::atomic::Species</td></tr>
+<tr class="memdesc:a636e76d1c67cf412d92461590daa7dbe"><td class="mdescLeft">&#160;</td><td class="mdescRight">Type alias for atomic species.  <br /></td></tr>
+<tr class="separator:a636e76d1c67cf412d92461590daa7dbe"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:ae61c7a93f9d4f8ded1e9c9dd2221d864" id="r_ae61c7a93f9d4f8ded1e9c9dd2221d864"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae61c7a93f9d4f8ded1e9c9dd2221d864">is_initialized</a> () const override</td></tr>
+<tr class="memdesc:ae61c7a93f9d4f8ded1e9c9dd2221d864"><td class="mdescLeft">&#160;</td><td class="mdescRight">Check whether the scratchpad has been initialized.  <br /></td></tr>
+<tr class="separator:ae61c7a93f9d4f8ded1e9c9dd2221d864"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a97f1fffc38872df3edd8c681685aa1fc" id="r_a97f1fffc38872df3edd8c681685aa1fc"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a97f1fffc38872df3edd8c681685aa1fc">initialize</a> ()</td></tr>
+<tr class="memdesc:a97f1fffc38872df3edd8c681685aa1fc"><td class="mdescLeft">&#160;</td><td class="mdescRight">Initialize the scratchpad by creating a SUNDIALS context.  <br /></td></tr>
+<tr class="separator:a97f1fffc38872df3edd8c681685aa1fc"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:abf68ba962db96f054285ef6ba06070a1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Destructor that properly releases SUNDIALS resources.  <br /></td></tr>
+<tr class="separator:abf68ba962db96f054285ef6ba06070a1"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memdesc:a7dbce2e9a2f940cbde8888aa67f5f3aa"><td class="mdescLeft">&#160;</td><td class="mdescRight">Create a partial copy of this scratchpad.  <br /></td></tr>
+<tr class="separator:a7dbce2e9a2f940cbde8888aa67f5f3aa"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a></td></tr>
+<tr class="memitem:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad" id="r_ac972e0fa19ff7623a6f0f8aedc5e174b"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#ac972e0fa19ff7623a6f0f8aedc5e174b">~AbstractScratchPad</a> ()=default</td></tr>
+<tr class="memdesc:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor for proper cleanup of derived classes.  <br /></td></tr>
+<tr class="separator:ac972e0fa19ff7623a6f0f8aedc5e174b inherit pub_methods_structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a3c44438f2b807451a0ac56a2b57900b6" id="r_a3c44438f2b807451a0ac56a2b57900b6"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3c44438f2b807451a0ac56a2b57900b6">has_initialized</a> = false</td></tr>
+<tr class="memdesc:a3c44438f2b807451a0ac56a2b57900b6"><td class="mdescLeft">&#160;</td><td class="mdescRight">Flag indicating whether the scratchpad has been initialized.  <br /></td></tr>
+<tr class="separator:a3c44438f2b807451a0ac56a2b57900b6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a95836c7415ca6598185a612e0677ee89" id="r_a95836c7415ca6598185a612e0677ee89"><td class="memItemLeft" align="right" valign="top">double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a95836c7415ca6598185a612e0677ee89">flux_coupling_threshold</a> = 5.0</td></tr>
+<tr class="memdesc:a95836c7415ca6598185a612e0677ee89"><td class="mdescLeft">&#160;</td><td class="mdescRight">@breif User configurable parameter to control flux coupling threshold used  <br /></td></tr>
+<tr class="separator:a95836c7415ca6598185a612e0677ee89"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a617d7bcbc77a8004fd75a35bf1bdad45" id="r_a617d7bcbc77a8004fd75a35bf1bdad45"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="#ad81d359207946b3955fc59c78fd7d4f4">QSEGroup</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a617d7bcbc77a8004fd75a35bf1bdad45">qse_groups</a></td></tr>
+<tr class="memdesc:a617d7bcbc77a8004fd75a35bf1bdad45"><td class="mdescLeft">&#160;</td><td class="mdescRight">Vector of QSE groups representing equilibrium clusters.  <br /></td></tr>
+<tr class="separator:a617d7bcbc77a8004fd75a35bf1bdad45"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab0a22916cd4f6c18f303558efe077aff" id="r_ab0a22916cd4f6c18f303558efe077aff"><td class="memItemLeft" align="right" valign="top">std::vector&lt; std::unique_ptr&lt; <a class="el" href="#a3b472db4b4723d3a1c87220144cc9b35">QSESolver</a> &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab0a22916cd4f6c18f303558efe077aff">qse_solvers</a></td></tr>
+<tr class="memdesc:ab0a22916cd4f6c18f303558efe077aff"><td class="mdescLeft">&#160;</td><td class="mdescRight">Vector of QSE solvers, one per QSE group.  <br /></td></tr>
+<tr class="separator:ab0a22916cd4f6c18f303558efe077aff"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a38ea81d9d616cd0f74747e44948f4ab9" id="r_a38ea81d9d616cd0f74747e44948f4ab9"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="#a636e76d1c67cf412d92461590daa7dbe">Species</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a38ea81d9d616cd0f74747e44948f4ab9">dynamic_species</a></td></tr>
+<tr class="memdesc:a38ea81d9d616cd0f74747e44948f4ab9"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="#a636e76d1c67cf412d92461590daa7dbe" title="Type alias for atomic species.">Species</a> that evolve on the dynamic (slow) timescale.  <br /></td></tr>
+<tr class="separator:a38ea81d9d616cd0f74747e44948f4ab9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a07552ac293e905112014c421ea15eb2f" id="r_a07552ac293e905112014c421ea15eb2f"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="#a636e76d1c67cf412d92461590daa7dbe">Species</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a07552ac293e905112014c421ea15eb2f">algebraic_species</a></td></tr>
+<tr class="memdesc:a07552ac293e905112014c421ea15eb2f"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="#a636e76d1c67cf412d92461590daa7dbe" title="Type alias for atomic species.">Species</a> that are solved algebraically (fast timescale/QSE).  <br /></td></tr>
+<tr class="separator:a07552ac293e905112014c421ea15eb2f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2e02493490755a799f7dbc3322780c63" id="r_a2e02493490755a799f7dbc3322780c63"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; uint64_t, fourdst::composition::Composition &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2e02493490755a799f7dbc3322780c63">composition_cache</a></td></tr>
+<tr class="memdesc:a2e02493490755a799f7dbc3322780c63"><td class="mdescLeft">&#160;</td><td class="mdescRight">Cache of computed compositions indexed by a hash key.  <br /></td></tr>
+<tr class="separator:a2e02493490755a799f7dbc3322780c63"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a735335d563bb612f19b531107c89fab6" id="r_a735335d563bb612f19b531107c89fab6"><td class="memItemLeft" align="right" valign="top">SUNContext&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a735335d563bb612f19b531107c89fab6">sun_ctx</a> = nullptr</td></tr>
+<tr class="memdesc:a735335d563bb612f19b531107c89fab6"><td class="mdescLeft">&#160;</td><td class="mdescRight">SUNDIALS context for solver operations.  <br /></td></tr>
+<tr class="separator:a735335d563bb612f19b531107c89fab6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-static-attribs" name="pub-static-attribs"></a>
+Static Public Attributes</h2></td></tr>
+<tr class="memitem:a0200b3fd40de5691f3c3f821a864f9f0" id="r_a0200b3fd40de5691f3c3f821a864f9f0"><td class="memItemLeft" align="right" valign="top">static constexpr auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0200b3fd40de5691f3c3f821a864f9f0">ID</a> = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea04752870c6cbdf741856f817d68f80bc">ScratchPadType::MULTISCALE_PARTITIONING_ENGINE_VIEW_SCRATCHPAD</a></td></tr>
+<tr class="memdesc:a0200b3fd40de5691f3c3f821a864f9f0"><td class="mdescLeft">&#160;</td><td class="mdescRight">Unique identifier for this scratchpad type.  <br /></td></tr>
+<tr class="separator:a0200b3fd40de5691f3c3f821a864f9f0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>Scratchpad for multiscale partitioning engine computations with QSE groups. </p>
+<p><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html" title="Scratchpad for multiscale partitioning engine computations with QSE groups.">MultiscalePartitioningEngineViewScratchPad</a> provides thread-local storage for the multiscale partitioning algorithm, which separates species into fast (algebraic/QSE) and slow (dynamic) timescale groups. This enables efficient integration of stiff reaction networks by solving QSE subsystems separately.</p>
+<dl class="section user"><dt>Thread Safety</dt><dd>This class is <b>not thread-safe</b>. SUNDIALS contexts and QSE solver objects maintain internal state that cannot be shared across threads. Each thread must have its own scratchpad instance with its own SUNContext. When using <a class="el" href="#a7dbce2e9a2f940cbde8888aa67f5f3aa" title="Create a partial copy of this scratchpad.">clone()</a>, the new instance starts uninitialized and must call <a class="el" href="#a97f1fffc38872df3edd8c681685aa1fc" title="Initialize the scratchpad by creating a SUNDIALS context.">initialize()</a> to create a new SUNContext.</dd></dl>
+<dl class="section note"><dt>Note</dt><dd>The destructor properly cleans up SUNDIALS resources by freeing the SUNContext after clearing all solvers that depend on it.</dd></dl>
+<dl class="section warning"><dt>Warning</dt><dd>QSE solvers are <b>not cloned</b> - they must be re-created in the cloned scratchpad as needed. </dd></dl>
+</div><h2 class="groupheader">Member Typedef Documentation</h2>
+<a id="ad81d359207946b3955fc59c78fd7d4f4" name="ad81d359207946b3955fc59c78fd7d4f4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad81d359207946b3955fc59c78fd7d4f4">&#9670;&#160;</a></span>QSEGroup</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">using <a class="el" href="#ad81d359207946b3955fc59c78fd7d4f4">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::QSEGroup</a> = <a class="el" href="structgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_group.html">MultiscalePartitioningEngineView::QSEGroup</a></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Type alias for QSE group from the multiscale engine view. </p>
+
+</div>
+</div>
+<a id="a3b472db4b4723d3a1c87220144cc9b35" name="a3b472db4b4723d3a1c87220144cc9b35"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3b472db4b4723d3a1c87220144cc9b35">&#9670;&#160;</a></span>QSESolver</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">using <a class="el" href="#a3b472db4b4723d3a1c87220144cc9b35">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::QSESolver</a> = <a class="el" href="classgridfire_1_1engine_1_1_multiscale_partitioning_engine_view_1_1_q_s_e_solver.html">MultiscalePartitioningEngineView::QSESolver</a></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Type alias for QSE solver from the multiscale engine view. </p>
+
+</div>
+</div>
+<a id="a636e76d1c67cf412d92461590daa7dbe" name="a636e76d1c67cf412d92461590daa7dbe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a636e76d1c67cf412d92461590daa7dbe">&#9670;&#160;</a></span>Species</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">using <a class="el" href="#a636e76d1c67cf412d92461590daa7dbe">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::Species</a> = fourdst::atomic::Species</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Type alias for atomic species. </p>
+
+</div>
+</div>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="abf68ba962db96f054285ef6ba06070a1" name="abf68ba962db96f054285ef6ba06070a1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abf68ba962db96f054285ef6ba06070a1">&#9670;&#160;</a></span>~MultiscalePartitioningEngineViewScratchPad()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::~MultiscalePartitioningEngineViewScratchPad </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel override">override</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Destructor that properly releases SUNDIALS resources. </p>
+<p>Clears all QSE solvers before freeing the SUNContext to ensure proper cleanup order and avoid dangling references. </p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a7dbce2e9a2f940cbde8888aa67f5f3aa" name="a7dbce2e9a2f940cbde8888aa67f5f3aa"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7dbce2e9a2f940cbde8888aa67f5f3aa">&#9670;&#160;</a></span>clone()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">AbstractScratchPad</a> &gt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::clone </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Create a partial copy of this scratchpad. </p>
+<p>Creates a copy with the QSE groups, species classifications, and composition cache.</p>
+<dl class="section return"><dt>Returns</dt><dd>A unique pointer to the cloned scratchpad.</dd></dl>
+<dl class="section note"><dt>Note</dt><dd>The new instance will automatically initialize a new SUNContext and clone the QSE solvers.</dd></dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">MultiscalePartitioningEngineViewScratchPad</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>;</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.initialize();</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.dynamic_species = {hydrogen, helium};</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Clone for a worker thread</span></div>
+<div class="line"><span class="keyword">auto</span> worker = <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.clone();</div>
+<div class="ttc" id="anamespacegridfire_1_1engine_1_1scratch_html"><div class="ttname"><a href="namespacegridfire_1_1engine_1_1scratch.html">gridfire::engine::scratch</a></div><div class="ttdoc">Scratchpad memory management for computational engines.</div><div class="ttdef"><b>Definition</b> blob.h:69</div></div>
+<div class="ttc" id="astructgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_html"><div class="ttname"><a href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a></div><div class="ttdoc">Scratchpad for multiscale partitioning engine computations with QSE groups.</div><div class="ttdef"><b>Definition</b> engine_multiscale_scratchpad.h:90</div></div>
+</div><!-- fragment --> </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#aaaa5135efe8b9635e8f91797e9c85b3e">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<a id="a97f1fffc38872df3edd8c681685aa1fc" name="a97f1fffc38872df3edd8c681685aa1fc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a97f1fffc38872df3edd8c681685aa1fc">&#9670;&#160;</a></span>initialize()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::initialize </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Initialize the scratchpad by creating a SUNDIALS context. </p>
+<p>Creates a new SUNContext for use with SUNDIALS solvers. This method is idempotent; calling it multiple times has no effect after the first successful initialization.</p>
+<dl class="exception"><dt>Exceptions</dt><dd>
+  <table class="exception">
+    <tr><td class="paramname">std::runtime_error</td><td>if SUNContext creation fails.</td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section user"><dt>Examples</dt><dd><div class="fragment"><div class="line"><a class="code hl_struct" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">MultiscalePartitioningEngineViewScratchPad</a> <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>;</div>
+<div class="line"><a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.initialize();</div>
+<div class="line"> </div>
+<div class="line"><span class="comment">// Now safe to use SUNContext for solver creation</span></div>
+<div class="line">SUNContext ctx = <a class="code hl_namespace" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a>.sun_ctx;</div>
+</div><!-- fragment --> </dd></dl>
+
+</div>
+</div>
+<a id="ae61c7a93f9d4f8ded1e9c9dd2221d864" name="ae61c7a93f9d4f8ded1e9c9dd2221d864"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae61c7a93f9d4f8ded1e9c9dd2221d864">&#9670;&#160;</a></span>is_initialized()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::is_initialized </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Check whether the scratchpad has been initialized. </p>
+<dl class="section return"><dt>Returns</dt><dd>true if initialized with a valid SUNContext, false otherwise. </dd></dl>
+
+<p>Implements <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html#a1ee6453778d15be0b6dc546f1e5e4768">gridfire::engine::scratch::AbstractScratchPad</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a07552ac293e905112014c421ea15eb2f" name="a07552ac293e905112014c421ea15eb2f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a07552ac293e905112014c421ea15eb2f">&#9670;&#160;</a></span>algebraic_species</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;<a class="el" href="#a636e76d1c67cf412d92461590daa7dbe">Species</a>&gt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::algebraic_species</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p><a class="el" href="#a636e76d1c67cf412d92461590daa7dbe" title="Type alias for atomic species.">Species</a> that are solved algebraically (fast timescale/QSE). </p>
+
+</div>
+</div>
+<a id="a2e02493490755a799f7dbc3322780c63" name="a2e02493490755a799f7dbc3322780c63"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2e02493490755a799f7dbc3322780c63">&#9670;&#160;</a></span>composition_cache</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unordered_map&lt;uint64_t, fourdst::composition::Composition&gt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::composition_cache</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Cache of computed compositions indexed by a hash key. </p>
+
+</div>
+</div>
+<a id="a38ea81d9d616cd0f74747e44948f4ab9" name="a38ea81d9d616cd0f74747e44948f4ab9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a38ea81d9d616cd0f74747e44948f4ab9">&#9670;&#160;</a></span>dynamic_species</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;<a class="el" href="#a636e76d1c67cf412d92461590daa7dbe">Species</a>&gt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::dynamic_species</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p><a class="el" href="#a636e76d1c67cf412d92461590daa7dbe" title="Type alias for atomic species.">Species</a> that evolve on the dynamic (slow) timescale. </p>
+
+</div>
+</div>
+<a id="a95836c7415ca6598185a612e0677ee89" name="a95836c7415ca6598185a612e0677ee89"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a95836c7415ca6598185a612e0677ee89">&#9670;&#160;</a></span>flux_coupling_threshold</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::flux_coupling_threshold = 5.0</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>@breif User configurable parameter to control flux coupling threshold used </p>
+
+</div>
+</div>
+<a id="a3c44438f2b807451a0ac56a2b57900b6" name="a3c44438f2b807451a0ac56a2b57900b6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3c44438f2b807451a0ac56a2b57900b6">&#9670;&#160;</a></span>has_initialized</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::has_initialized = false</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Flag indicating whether the scratchpad has been initialized. </p>
+
+</div>
+</div>
+<a id="a0200b3fd40de5691f3c3f821a864f9f0" name="a0200b3fd40de5691f3c3f821a864f9f0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0200b3fd40de5691f3c3f821a864f9f0">&#9670;&#160;</a></span>ID</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">auto gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::ID = <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649bea04752870c6cbdf741856f817d68f80bc">ScratchPadType::MULTISCALE_PARTITIONING_ENGINE_VIEW_SCRATCHPAD</a></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel static">static</span><span class="mlabel constexpr">constexpr</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Unique identifier for this scratchpad type. </p>
+
+</div>
+</div>
+<a id="a617d7bcbc77a8004fd75a35bf1bdad45" name="a617d7bcbc77a8004fd75a35bf1bdad45"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a617d7bcbc77a8004fd75a35bf1bdad45">&#9670;&#160;</a></span>qse_groups</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;<a class="el" href="#ad81d359207946b3955fc59c78fd7d4f4">QSEGroup</a>&gt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::qse_groups</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Vector of QSE groups representing equilibrium clusters. </p>
+
+</div>
+</div>
+<a id="ab0a22916cd4f6c18f303558efe077aff" name="ab0a22916cd4f6c18f303558efe077aff"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab0a22916cd4f6c18f303558efe077aff">&#9670;&#160;</a></span>qse_solvers</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;std::unique_ptr&lt;<a class="el" href="#a3b472db4b4723d3a1c87220144cc9b35">QSESolver</a>&gt; &gt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::qse_solvers</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Vector of QSE solvers, one per QSE group. </p>
+<dl class="section note"><dt>Note</dt><dd>These are not cloned; new instances must create their own solvers. </dd></dl>
+
+</div>
+</div>
+<a id="a735335d563bb612f19b531107c89fab6" name="a735335d563bb612f19b531107c89fab6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a735335d563bb612f19b531107c89fab6">&#9670;&#160;</a></span>sun_ctx</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">SUNContext gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad::sun_ctx = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>SUNDIALS context for solver operations. </p>
+<dl class="section note"><dt>Note</dt><dd>Must be freed in destructor after clearing solvers. </dd></dl>
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine__multiscale__scratchpad_8h.html">engine_multiscale_scratchpad.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
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+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine.html">engine</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html">scratch</a></li><li class="navelem"><a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">MultiscalePartitioningEngineViewScratchPad</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/structgridfire_1_1reaction_1_1_rate_coefficient_set.html b/docs/html/structgridfire_1_1reaction_1_1_rate_coefficient_set.html
index e52e36f0..7fc6ec76 100644
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+++ b/docs/html/structgridfire_1_1reaction_1_1_rate_coefficient_set.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.0_rc2</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
diff --git a/docs/html/structgridfire_1_1solver_1_1_grid_solver_context-members.html b/docs/html/structgridfire_1_1solver_1_1_grid_solver_context-members.html
new file mode 100644
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+<meta name="generator" content="Doxygen 1.13.2"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: Member List</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<script type="text/javascript" src="search/search.js"></script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
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+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+var searchBox = new SearchBox("searchBox", "search/",'.html');
+/* @license-end */
+</script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(function(){initNavTree('structgridfire_1_1solver_1_1_grid_solver_context.html',''); initResizable(true); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
+     onkeydown="return searchBox.OnSearchSelectKey(event)">
+</div>
+
+<!-- iframe showing the search results (closed by default) -->
+<div id="MSearchResultsWindow">
+<div id="MSearchResults">
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+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::GridSolverContext Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a2b11556cc7da39e1b1b4b86b77766abb">clear_callback</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a1b08b8a2687f7a218addebdb8bf925f0">clear_callback</a>(size_t zone_idx)</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#adc27a38a9db7b8863784adb42c9eaf18">ctx_template</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a4a1812f572efd9ba4bd356357d441934">GridSolverContext</a>(const engine::scratch::StateBlob &amp;ctx_template)</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a58a8e377f76fbb26f11da469411faaaa">init</a>() override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a8cd581b8d3f5c54b4e62536e87134dd9">reset</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#aed2cba60fbf2e45c6f5f30051e49460e">set_callback</a>(const std::function&lt; void(const TimestepContextBase &amp;)&gt; &amp;callback)</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#af1f83152d2e08dd91d5f4c69f69fa931">set_callback</a>(const std::function&lt; void(const TimestepContextBase &amp;)&gt; &amp;callback, size_t zone_idx)</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a02215c68ebc4a488343aabb495791c77">set_detailed_logging</a>(bool enable) override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#af90f3a9d7f688b52cd3ee201af6b0b7f">set_stdout_logging</a>(bool enable) override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#afe3a8b9630757cbbb4df07de04674e4c">solver_workspaces</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a583ef194f336094dda0afdee6379c504">timestep_callbacks</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#af72f6ffeea59145199e6ee889e10559a">zone_completion_logging</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#adcae0fe5026e6939385cfff1c809ddbd">zone_detailed_logging</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a496afc40e71e9d7dd6c2d7e311d49de2">zone_stdout_logging</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html">gridfire::solver::GridSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">~SolverContextBase</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
+</div><!-- doc-content -->
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diff --git a/docs/html/structgridfire_1_1solver_1_1_grid_solver_context.html b/docs/html/structgridfire_1_1solver_1_1_grid_solver_context.html
new file mode 100644
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: gridfire::solver::GridSolverContext Struct Reference</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<link href="search/search.css" rel="stylesheet" type="text/css"/>
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+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
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+<script type="text/javascript">
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
+     onkeydown="return searchBox.OnSearchSelectKey(event)">
+</div>
+
+<!-- iframe showing the search results (closed by default) -->
+<div id="MSearchResultsWindow">
+<div id="MSearchResults">
+<div class="SRPage">
+<div id="SRIndex">
+<div id="SRResults"></div>
+<div class="SRStatus" id="Loading">Loading...</div>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="structgridfire_1_1solver_1_1_grid_solver_context-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::GridSolverContext Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;GridSolver.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::solver::GridSolverContext:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_grid_solver_context__inherit__graph.svg" width="183" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::solver::GridSolverContext:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_grid_solver_context__coll__graph.svg" width="100%" height="518"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a58a8e377f76fbb26f11da469411faaaa" id="r_a58a8e377f76fbb26f11da469411faaaa"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a58a8e377f76fbb26f11da469411faaaa">init</a> () override</td></tr>
+<tr class="separator:a58a8e377f76fbb26f11da469411faaaa"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8cd581b8d3f5c54b4e62536e87134dd9" id="r_a8cd581b8d3f5c54b4e62536e87134dd9"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8cd581b8d3f5c54b4e62536e87134dd9">reset</a> ()</td></tr>
+<tr class="separator:a8cd581b8d3f5c54b4e62536e87134dd9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aed2cba60fbf2e45c6f5f30051e49460e" id="r_aed2cba60fbf2e45c6f5f30051e49460e"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aed2cba60fbf2e45c6f5f30051e49460e">set_callback</a> (const std::function&lt; void(const <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">TimestepContextBase</a> &amp;)&gt; &amp;callback)</td></tr>
+<tr class="separator:aed2cba60fbf2e45c6f5f30051e49460e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af1f83152d2e08dd91d5f4c69f69fa931" id="r_af1f83152d2e08dd91d5f4c69f69fa931"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af1f83152d2e08dd91d5f4c69f69fa931">set_callback</a> (const std::function&lt; void(const <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">TimestepContextBase</a> &amp;)&gt; &amp;callback, size_t zone_idx)</td></tr>
+<tr class="separator:af1f83152d2e08dd91d5f4c69f69fa931"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a4a1812f572efd9ba4bd356357d441934"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_structgridfire_1_1solver_1_1_solver_context_base"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_structgridfire_1_1solver_1_1_solver_context_base')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td></tr>
+<tr class="memitem:ab1abf9e5ff7f53a6cebe5e00ea5fc0c8 inherit pub_methods_structgridfire_1_1solver_1_1_solver_context_base" id="r_ab1abf9e5ff7f53a6cebe5e00ea5fc0c8"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">~SolverContextBase</a> ()=default</td></tr>
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+</table><table class="memberdecls">
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+Public Attributes</h2></td></tr>
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+<tr class="separator:a583ef194f336094dda0afdee6379c504"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:adc27a38a9db7b8863784adb42c9eaf18" id="r_adc27a38a9db7b8863784adb42c9eaf18"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#adc27a38a9db7b8863784adb42c9eaf18">ctx_template</a></td></tr>
+<tr class="separator:adc27a38a9db7b8863784adb42c9eaf18"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:af72f6ffeea59145199e6ee889e10559a"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:adcae0fe5026e6939385cfff1c809ddbd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a4a1812f572efd9ba4bd356357d441934" name="a4a1812f572efd9ba4bd356357d441934"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4a1812f572efd9ba4bd356357d441934">&#9670;&#160;</a></span>GridSolverContext()</h2>
+
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+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::GridSolverContext::GridSolverContext </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx_template</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel explicit">explicit</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a2b11556cc7da39e1b1b4b86b77766abb" name="a2b11556cc7da39e1b1b4b86b77766abb"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2b11556cc7da39e1b1b4b86b77766abb">&#9670;&#160;</a></span>clear_callback() <span class="overload">[1/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::clear_callback </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a1b08b8a2687f7a218addebdb8bf925f0" name="a1b08b8a2687f7a218addebdb8bf925f0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1b08b8a2687f7a218addebdb8bf925f0">&#9670;&#160;</a></span>clear_callback() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::clear_callback </td>
+          <td>(</td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>zone_idx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a58a8e377f76fbb26f11da469411faaaa" name="a58a8e377f76fbb26f11da469411faaaa"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a58a8e377f76fbb26f11da469411faaaa">&#9670;&#160;</a></span>init()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::init </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ae324568d7ca41599f1ea924f06284da0">gridfire::solver::SolverContextBase</a>.</p>
+
+</div>
+</div>
+<a id="a8cd581b8d3f5c54b4e62536e87134dd9" name="a8cd581b8d3f5c54b4e62536e87134dd9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8cd581b8d3f5c54b4e62536e87134dd9">&#9670;&#160;</a></span>reset()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::reset </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aed2cba60fbf2e45c6f5f30051e49460e" name="aed2cba60fbf2e45c6f5f30051e49460e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aed2cba60fbf2e45c6f5f30051e49460e">&#9670;&#160;</a></span>set_callback() <span class="overload">[1/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::set_callback </td>
+          <td>(</td>
+          <td class="paramtype">const std::function&lt; void(const <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">TimestepContextBase</a> &amp;)&gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>callback</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="af1f83152d2e08dd91d5f4c69f69fa931" name="af1f83152d2e08dd91d5f4c69f69fa931"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af1f83152d2e08dd91d5f4c69f69fa931">&#9670;&#160;</a></span>set_callback() <span class="overload">[2/2]</span></h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::set_callback </td>
+          <td>(</td>
+          <td class="paramtype">const std::function&lt; void(const <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">TimestepContextBase</a> &amp;)&gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>callback</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>zone_idx</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a02215c68ebc4a488343aabb495791c77" name="a02215c68ebc4a488343aabb495791c77"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a02215c68ebc4a488343aabb495791c77">&#9670;&#160;</a></span>set_detailed_logging()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::set_detailed_logging </td>
+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a4b8185f8b9d46d19d0b0c2bfba16391f">gridfire::solver::SolverContextBase</a>.</p>
+
+</div>
+</div>
+<a id="af90f3a9d7f688b52cd3ee201af6b0b7f" name="af90f3a9d7f688b52cd3ee201af6b0b7f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af90f3a9d7f688b52cd3ee201af6b0b7f">&#9670;&#160;</a></span>set_stdout_logging()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::GridSolverContext::set_stdout_logging </td>
+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a693d8ad4649456ff3cf956072614a2e7">gridfire::solver::SolverContextBase</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="adc27a38a9db7b8863784adb42c9eaf18" name="adc27a38a9db7b8863784adb42c9eaf18"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adc27a38a9db7b8863784adb42c9eaf18">&#9670;&#160;</a></span>ctx_template</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a>&amp; gridfire::solver::GridSolverContext::ctx_template</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="afe3a8b9630757cbbb4df07de04674e4c" name="afe3a8b9630757cbbb4df07de04674e4c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afe3a8b9630757cbbb4df07de04674e4c">&#9670;&#160;</a></span>solver_workspaces</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;std::unique_ptr&lt;<a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">SolverContextBase</a>&gt; &gt; gridfire::solver::GridSolverContext::solver_workspaces</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a583ef194f336094dda0afdee6379c504" name="a583ef194f336094dda0afdee6379c504"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a583ef194f336094dda0afdee6379c504">&#9670;&#160;</a></span>timestep_callbacks</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt;std::function&lt;void(const <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">TimestepContextBase</a>&amp;)&gt; &gt; gridfire::solver::GridSolverContext::timestep_callbacks</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="af72f6ffeea59145199e6ee889e10559a" name="af72f6ffeea59145199e6ee889e10559a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af72f6ffeea59145199e6ee889e10559a">&#9670;&#160;</a></span>zone_completion_logging</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::solver::GridSolverContext::zone_completion_logging = true</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="adcae0fe5026e6939385cfff1c809ddbd" name="adcae0fe5026e6939385cfff1c809ddbd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adcae0fe5026e6939385cfff1c809ddbd">&#9670;&#160;</a></span>zone_detailed_logging</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::solver::GridSolverContext::zone_detailed_logging = false</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a496afc40e71e9d7dd6c2d7e311d49de2" name="a496afc40e71e9d7dd6c2d7e311d49de2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a496afc40e71e9d7dd6c2d7e311d49de2">&#9670;&#160;</a></span>zone_stdout_logging</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::solver::GridSolverContext::zone_stdout_logging = false</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following files:<ul>
+<li>src/include/gridfire/solver/strategies/<a class="el" href="_grid_solver_8h.html">GridSolver.h</a></li>
+<li>src/lib/solver/strategies/<a class="el" href="_grid_solver_8cpp.html">GridSolver.cpp</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
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+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data.html">gridfire::solver::PointSolver::CVODEUserData</a>, including all inherited members.</p>
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+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::PointSolver::CVODEUserData Struct Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>A helper struct to pass C++ context to C-style CVODE callbacks.  
+ <a href="#details">More...</a></p>
+<div class="dynheader">
+Collaboration diagram for gridfire::solver::PointSolver::CVODEUserData:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_point_solver_1_1_c_v_o_d_e_user_data__coll__graph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a6a9e63ce74c9b26309097d8aeeb228ed" id="r_a6a9e63ce74c9b26309097d8aeeb228ed"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1solver_1_1_point_solver.html">PointSolver</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6a9e63ce74c9b26309097d8aeeb228ed">solver_instance</a> {}</td></tr>
+<tr class="separator:a6a9e63ce74c9b26309097d8aeeb228ed"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a1797578ad8bed04e9a7e3f44fa49e532"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8b8253d6ec25a11a70dc94dccf14c190" id="r_a8b8253d6ec25a11a70dc94dccf14c190"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8b8253d6ec25a11a70dc94dccf14c190">ctx</a></td></tr>
+<tr class="separator:a8b8253d6ec25a11a70dc94dccf14c190"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a50ec51653a2a23a46a0cddee3196d2d3"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a2eb3a8c09b537971bd6818df3e86ea23"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a7efb6d5939cb8427a2ca853b564b50e0" id="r_a7efb6d5939cb8427a2ca853b564b50e0"><td class="memItemLeft" align="right" valign="top">double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7efb6d5939cb8427a2ca853b564b50e0">energy</a> {}</td></tr>
+<tr class="separator:a7efb6d5939cb8427a2ca853b564b50e0"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a4ed85956c95e21ae8801a9fbf2f8f554"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:adb7ced0b812f675c3087b05d0810c56a" id="r_adb7ced0b812f675c3087b05d0810c56a"><td class="memItemLeft" align="right" valign="top">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1exceptions_1_1_engine_error.html">exceptions::EngineError</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#adb7ced0b812f675c3087b05d0810c56a">captured_exception</a> = nullptr</td></tr>
+<tr class="separator:adb7ced0b812f675c3087b05d0810c56a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2839fe5ea6e7e9f9c1a9e1de6be7180b" id="r_a2839fe5ea6e7e9f9c1a9e1de6be7180b"><td class="memItemLeft" align="right" valign="top">std::optional&lt; std::map&lt; fourdst::atomic::Species, std::unordered_map&lt; std::string, double &gt; &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2839fe5ea6e7e9f9c1a9e1de6be7180b">reaction_contribution_map</a></td></tr>
+<tr class="separator:a2839fe5ea6e7e9f9c1a9e1de6be7180b"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ab26b161db829d2dc43e644f4388f9749"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><p>A helper struct to pass C++ context to C-style CVODE callbacks. </p>
+<p>Carries pointers back to the solver instance and engine, the current thermodynamic state, energy accumulator, and a slot to capture a copy of exceptions::StaleEngineTrigger from RHS evaluation. The RHS wrapper treats this as a recoverable failure and returns 1 to CVODE, then the driver loop inspects and rethrows. </p>
+</div><h2 class="groupheader">Member Data Documentation</h2>
+<a id="adb7ced0b812f675c3087b05d0810c56a" name="adb7ced0b812f675c3087b05d0810c56a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adb7ced0b812f675c3087b05d0810c56a">&#9670;&#160;</a></span>captured_exception</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt;<a class="el" href="classgridfire_1_1exceptions_1_1_engine_error.html">exceptions::EngineError</a>&gt; gridfire::solver::PointSolver::CVODEUserData::captured_exception = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a8b8253d6ec25a11a70dc94dccf14c190" name="a8b8253d6ec25a11a70dc94dccf14c190"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8b8253d6ec25a11a70dc94dccf14c190">&#9670;&#160;</a></span>ctx</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a>&amp; gridfire::solver::PointSolver::CVODEUserData::ctx</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a7efb6d5939cb8427a2ca853b564b50e0" name="a7efb6d5939cb8427a2ca853b564b50e0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7efb6d5939cb8427a2ca853b564b50e0">&#9670;&#160;</a></span>energy</h2>
+
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+<div class="memproto">
+      <table class="memname">
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+          <td class="memname">double gridfire::solver::PointSolver::CVODEUserData::energy {}</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a2ad8a79a9655787599cd5a85a03de602" name="a2ad8a79a9655787599cd5a85a03de602"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2ad8a79a9655787599cd5a85a03de602">&#9670;&#160;</a></span>engine</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a>* gridfire::solver::PointSolver::CVODEUserData::engine {}</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
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+<h2 class="memtitle"><span class="permalink"><a href="#a4ed85956c95e21ae8801a9fbf2f8f554">&#9670;&#160;</a></span>networkSpecies</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const std::vector&lt;fourdst::atomic::Species&gt;* gridfire::solver::PointSolver::CVODEUserData::networkSpecies {}</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a25faf0a584babf267399789bfad17652" name="a25faf0a584babf267399789bfad17652"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a25faf0a584babf267399789bfad17652">&#9670;&#160;</a></span>neutrino_energy_loss_rate</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
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+          <td class="memname">double gridfire::solver::PointSolver::CVODEUserData::neutrino_energy_loss_rate = 0.0</td>
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+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a2839fe5ea6e7e9f9c1a9e1de6be7180b" name="a2839fe5ea6e7e9f9c1a9e1de6be7180b"></a>
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+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;std::map&lt;fourdst::atomic::Species, std::unordered_map&lt;std::string, double&gt; &gt; &gt; gridfire::solver::PointSolver::CVODEUserData::reaction_contribution_map</td>
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+<h2 class="memtitle"><span class="permalink"><a href="#a2eb3a8c09b537971bd6818df3e86ea23">&#9670;&#160;</a></span>rho</h2>
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+        </tr>
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+
+</div>
+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a1797578ad8bed04e9a7e3f44fa49e532">&#9670;&#160;</a></span>sctx</h2>
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+          <td class="memname">double gridfire::solver::PointSolver::CVODEUserData::total_neutrino_flux = 0.0</td>
+        </tr>
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+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/solver/strategies/<a class="el" href="_point_solver_8h.html">PointSolver.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
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+  <ul>
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: Member List</title>
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+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
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+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
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+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
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+<!-- Generated by Doxygen 1.13.2 -->
+<script type="text/javascript">
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+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::PointSolverContext Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#ad77ecf8c8b8520a56290ae09ea5889c1">abs_tol</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a5b810215c7ba5f00866815caf6cd875b">callback</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a0b28b5c16fe1892c8f5ea14c7d2f153f">clear_context</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#acb4ff9703d8ce8ff25a2d0772f493a0c">constraints</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a91614f1e009159d89e4c5a6c3dcc35a9">cvode_mem</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a895377662ff062bb83dd77226fa01c69">detailed_step_logging</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a637809fbd1ff29044b4b72f9860b62e9">engine_ctx</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a88b67dbf29cb41fe1880e6b471584b4c">has_context</a>() const</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#af20bd86770e817a82babaf719b3b4003">init</a>() override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#ae34ffe5c479c7318867eb55af33c2251">init_context</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a0ddfaa67469e8a86d2bd5d7a9b9aa581">J</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a5146d445436c49b9575e4d96102f3bf6">last_composition_hash</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a4b57947a21bd3969e229e9ed53185ae2">last_good_time_step</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a2d97cecbfee3e4a4bc40a94fc14e1ebb">last_size</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#af09072e265aa0ada637d765455d2625a">LS</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a07b3435453c57b31e7cb58212a886601">num_steps</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a34c212780f29247b2d18260ed46177d1">PointSolverContext</a>(const engine::scratch::StateBlob &amp;engine_ctx)</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#afac00ebe1c8bdea292cebf8b377e8181">rel_tol</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a3a339c970f45511a22ab8be1bd906a30">reset_all</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a66b1b37b00a5f7c858424d09781d7ebb">reset_cvode</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#aac1be4b918a38bfa9c37545510cd0a99">reset_user</a>()</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#ad78dbc3cf9da0a5e508f08343f2c6da5">set_detailed_logging</a>(bool enable) override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#aa9a3442738429f362a9f10fe92d5a1ea">set_stdout_logging</a>(bool enable) override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a3a342362afef5d3075e688ea7d0a68f1">stdout_logging</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a71ae0bd5dc85e83adc602a13fdf6bf3a">sun_ctx</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a8ed34f474bb0ea4f059adce3f84add22">Y</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#a0152fff56513f0eab79aa1909da507a0">YErr</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#adc6829dc77b6ef540af93c1b7e2e4f16">~PointSolverContext</a>() override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html">gridfire::solver::PointSolverContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">~SolverContextBase</a>()=default</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<title>GridFire: gridfire::solver::PointSolverContext Struct Reference</title>
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+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
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+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="structgridfire_1_1solver_1_1_point_solver_context-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::PointSolverContext Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;PointSolver.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::solver::PointSolverContext:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_point_solver_context__inherit__graph.svg" width="190" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for gridfire::solver::PointSolverContext:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_point_solver_context__coll__graph.svg" width="100%" height="411"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:af20bd86770e817a82babaf719b3b4003" id="r_af20bd86770e817a82babaf719b3b4003"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af20bd86770e817a82babaf719b3b4003">init</a> () override</td></tr>
+<tr class="separator:af20bd86770e817a82babaf719b3b4003"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa9a3442738429f362a9f10fe92d5a1ea" id="r_aa9a3442738429f362a9f10fe92d5a1ea"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa9a3442738429f362a9f10fe92d5a1ea">set_stdout_logging</a> (bool enable) override</td></tr>
+<tr class="separator:aa9a3442738429f362a9f10fe92d5a1ea"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ad78dbc3cf9da0a5e508f08343f2c6da5" id="r_ad78dbc3cf9da0a5e508f08343f2c6da5"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad78dbc3cf9da0a5e508f08343f2c6da5">set_detailed_logging</a> (bool enable) override</td></tr>
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+<tr class="separator:aac1be4b918a38bfa9c37545510cd0a99"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a0b28b5c16fe1892c8f5ea14c7d2f153f"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ae34ffe5c479c7318867eb55af33c2251"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a88b67dbf29cb41fe1880e6b471584b4c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a34c212780f29247b2d18260ed46177d1" id="r_a34c212780f29247b2d18260ed46177d1"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a34c212780f29247b2d18260ed46177d1">PointSolverContext</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;<a class="el" href="#a637809fbd1ff29044b4b72f9860b62e9">engine_ctx</a>)</td></tr>
+<tr class="separator:a34c212780f29247b2d18260ed46177d1"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:adc6829dc77b6ef540af93c1b7e2e4f16"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_structgridfire_1_1solver_1_1_solver_context_base"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_structgridfire_1_1solver_1_1_solver_context_base')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td></tr>
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+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a71ae0bd5dc85e83adc602a13fdf6bf3a" id="r_a71ae0bd5dc85e83adc602a13fdf6bf3a"><td class="memItemLeft" align="right" valign="top">SUNContext&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a71ae0bd5dc85e83adc602a13fdf6bf3a">sun_ctx</a> = nullptr</td></tr>
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+<tr class="memitem:a91614f1e009159d89e4c5a6c3dcc35a9" id="r_a91614f1e009159d89e4c5a6c3dcc35a9"><td class="memItemLeft" align="right" valign="top">void *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a91614f1e009159d89e4c5a6c3dcc35a9">cvode_mem</a> = nullptr</td></tr>
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+<tr class="separator:a637809fbd1ff29044b4b72f9860b62e9"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a5b810215c7ba5f00866815caf6cd875b"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a3a342362afef5d3075e688ea7d0a68f1"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:acb4ff9703d8ce8ff25a2d0772f493a0c"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:a2d97cecbfee3e4a4bc40a94fc14e1ebb" id="r_a2d97cecbfee3e4a4bc40a94fc14e1ebb"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2d97cecbfee3e4a4bc40a94fc14e1ebb">last_size</a> = 0</td></tr>
+<tr class="separator:a2d97cecbfee3e4a4bc40a94fc14e1ebb"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a5146d445436c49b9575e4d96102f3bf6" id="r_a5146d445436c49b9575e4d96102f3bf6"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5146d445436c49b9575e4d96102f3bf6">last_composition_hash</a> = 0ULL</td></tr>
+<tr class="separator:a5146d445436c49b9575e4d96102f3bf6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4b57947a21bd3969e229e9ed53185ae2" id="r_a4b57947a21bd3969e229e9ed53185ae2"><td class="memItemLeft" align="right" valign="top">sunrealtype&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4b57947a21bd3969e229e9ed53185ae2">last_good_time_step</a> = 0ULL</td></tr>
+<tr class="separator:a4b57947a21bd3969e229e9ed53185ae2"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a34c212780f29247b2d18260ed46177d1" name="a34c212780f29247b2d18260ed46177d1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a34c212780f29247b2d18260ed46177d1">&#9670;&#160;</a></span>PointSolverContext()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::PointSolverContext::PointSolverContext </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine_ctx</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel explicit">explicit</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="adc6829dc77b6ef540af93c1b7e2e4f16" name="adc6829dc77b6ef540af93c1b7e2e4f16"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adc6829dc77b6ef540af93c1b7e2e4f16">&#9670;&#160;</a></span>~PointSolverContext()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::PointSolverContext::~PointSolverContext </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a0b28b5c16fe1892c8f5ea14c7d2f153f" name="a0b28b5c16fe1892c8f5ea14c7d2f153f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0b28b5c16fe1892c8f5ea14c7d2f153f">&#9670;&#160;</a></span>clear_context()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::clear_context </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a88b67dbf29cb41fe1880e6b471584b4c" name="a88b67dbf29cb41fe1880e6b471584b4c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a88b67dbf29cb41fe1880e6b471584b4c">&#9670;&#160;</a></span>has_context()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::solver::PointSolverContext::has_context </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="af20bd86770e817a82babaf719b3b4003" name="af20bd86770e817a82babaf719b3b4003"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af20bd86770e817a82babaf719b3b4003">&#9670;&#160;</a></span>init()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::init </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ae324568d7ca41599f1ea924f06284da0">gridfire::solver::SolverContextBase</a>.</p>
+
+</div>
+</div>
+<a id="ae34ffe5c479c7318867eb55af33c2251" name="ae34ffe5c479c7318867eb55af33c2251"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae34ffe5c479c7318867eb55af33c2251">&#9670;&#160;</a></span>init_context()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::init_context </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a3a339c970f45511a22ab8be1bd906a30" name="a3a339c970f45511a22ab8be1bd906a30"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3a339c970f45511a22ab8be1bd906a30">&#9670;&#160;</a></span>reset_all()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::reset_all </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a66b1b37b00a5f7c858424d09781d7ebb" name="a66b1b37b00a5f7c858424d09781d7ebb"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a66b1b37b00a5f7c858424d09781d7ebb">&#9670;&#160;</a></span>reset_cvode()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::reset_cvode </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aac1be4b918a38bfa9c37545510cd0a99" name="aac1be4b918a38bfa9c37545510cd0a99"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aac1be4b918a38bfa9c37545510cd0a99">&#9670;&#160;</a></span>reset_user()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::reset_user </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ad78dbc3cf9da0a5e508f08343f2c6da5" name="ad78dbc3cf9da0a5e508f08343f2c6da5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad78dbc3cf9da0a5e508f08343f2c6da5">&#9670;&#160;</a></span>set_detailed_logging()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::set_detailed_logging </td>
+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a4b8185f8b9d46d19d0b0c2bfba16391f">gridfire::solver::SolverContextBase</a>.</p>
+
+</div>
+</div>
+<a id="aa9a3442738429f362a9f10fe92d5a1ea" name="aa9a3442738429f362a9f10fe92d5a1ea"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa9a3442738429f362a9f10fe92d5a1ea">&#9670;&#160;</a></span>set_stdout_logging()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">void gridfire::solver::PointSolverContext::set_stdout_logging </td>
+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implements <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a693d8ad4649456ff3cf956072614a2e7">gridfire::solver::SolverContextBase</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="ad77ecf8c8b8520a56290ae09ea5889c1" name="ad77ecf8c8b8520a56290ae09ea5889c1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad77ecf8c8b8520a56290ae09ea5889c1">&#9670;&#160;</a></span>abs_tol</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;double&gt; gridfire::solver::PointSolverContext::abs_tol</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>User-specified absolute tolerance. </p>
+
+</div>
+</div>
+<a id="a5b810215c7ba5f00866815caf6cd875b" name="a5b810215c7ba5f00866815caf6cd875b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5b810215c7ba5f00866815caf6cd875b">&#9670;&#160;</a></span>callback</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;<a class="el" href="namespacegridfire_1_1solver.html#a472214bac45251c72c311af1d615e6ea">TimestepCallback</a>&gt; gridfire::solver::PointSolverContext::callback</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Optional per-step callback. </p>
+
+</div>
+</div>
+<a id="acb4ff9703d8ce8ff25a2d0772f493a0c" name="acb4ff9703d8ce8ff25a2d0772f493a0c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acb4ff9703d8ce8ff25a2d0772f493a0c">&#9670;&#160;</a></span>constraints</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">N_Vector gridfire::solver::PointSolverContext::constraints = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>CVODE constraints vector (&gt;= 0 for species entries). </p>
+
+</div>
+</div>
+<a id="a91614f1e009159d89e4c5a6c3dcc35a9" name="a91614f1e009159d89e4c5a6c3dcc35a9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a91614f1e009159d89e4c5a6c3dcc35a9">&#9670;&#160;</a></span>cvode_mem</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void* gridfire::solver::PointSolverContext::cvode_mem = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>CVODE memory block. </p>
+
+</div>
+</div>
+<a id="a895377662ff062bb83dd77226fa01c69" name="a895377662ff062bb83dd77226fa01c69"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a895377662ff062bb83dd77226fa01c69">&#9670;&#160;</a></span>detailed_step_logging</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::solver::PointSolverContext::detailed_step_logging = false</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>If true, log detailed step diagnostics (error ratios, Jacobian, species balance). </p>
+
+</div>
+</div>
+<a id="a637809fbd1ff29044b4b72f9860b62e9" name="a637809fbd1ff29044b4b72f9860b62e9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a637809fbd1ff29044b4b72f9860b62e9">&#9670;&#160;</a></span>engine_ctx</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::unique_ptr&lt;<a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a>&gt; gridfire::solver::PointSolverContext::engine_ctx</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a0ddfaa67469e8a86d2bd5d7a9b9aa581" name="a0ddfaa67469e8a86d2bd5d7a9b9aa581"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0ddfaa67469e8a86d2bd5d7a9b9aa581">&#9670;&#160;</a></span>J</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">SUNMatrix gridfire::solver::PointSolverContext::J = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Dense Jacobian matrix. </p>
+
+</div>
+</div>
+<a id="a5146d445436c49b9575e4d96102f3bf6" name="a5146d445436c49b9575e4d96102f3bf6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5146d445436c49b9575e4d96102f3bf6">&#9670;&#160;</a></span>last_composition_hash</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::solver::PointSolverContext::last_composition_hash = 0ULL</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a4b57947a21bd3969e229e9ed53185ae2" name="a4b57947a21bd3969e229e9ed53185ae2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4b57947a21bd3969e229e9ed53185ae2">&#9670;&#160;</a></span>last_good_time_step</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">sunrealtype gridfire::solver::PointSolverContext::last_good_time_step = 0ULL</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a2d97cecbfee3e4a4bc40a94fc14e1ebb" name="a2d97cecbfee3e4a4bc40a94fc14e1ebb"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2d97cecbfee3e4a4bc40a94fc14e1ebb">&#9670;&#160;</a></span>last_size</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">size_t gridfire::solver::PointSolverContext::last_size = 0</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="af09072e265aa0ada637d765455d2625a" name="af09072e265aa0ada637d765455d2625a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af09072e265aa0ada637d765455d2625a">&#9670;&#160;</a></span>LS</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">SUNLinearSolver gridfire::solver::PointSolverContext::LS = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Dense linear solver. </p>
+
+</div>
+</div>
+<a id="a07b3435453c57b31e7cb58212a886601" name="a07b3435453c57b31e7cb58212a886601"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a07b3435453c57b31e7cb58212a886601">&#9670;&#160;</a></span>num_steps</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">int gridfire::solver::PointSolverContext::num_steps = 0</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>CVODE step counter (used for diagnostics and triggers). </p>
+
+</div>
+</div>
+<a id="afac00ebe1c8bdea292cebf8b377e8181" name="afac00ebe1c8bdea292cebf8b377e8181"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afac00ebe1c8bdea292cebf8b377e8181">&#9670;&#160;</a></span>rel_tol</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::optional&lt;double&gt; gridfire::solver::PointSolverContext::rel_tol</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>User-specified relative tolerance. </p>
+
+</div>
+</div>
+<a id="a3a342362afef5d3075e688ea7d0a68f1" name="a3a342362afef5d3075e688ea7d0a68f1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3a342362afef5d3075e688ea7d0a68f1">&#9670;&#160;</a></span>stdout_logging</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">bool gridfire::solver::PointSolverContext::stdout_logging = true</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>If true, print per-step logs and use CV_ONE_STEP. </p>
+
+</div>
+</div>
+<a id="a71ae0bd5dc85e83adc602a13fdf6bf3a" name="a71ae0bd5dc85e83adc602a13fdf6bf3a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a71ae0bd5dc85e83adc602a13fdf6bf3a">&#9670;&#160;</a></span>sun_ctx</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">SUNContext gridfire::solver::PointSolverContext::sun_ctx = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>SUNDIALS context (lifetime of the solver). </p>
+
+</div>
+</div>
+<a id="a8ed34f474bb0ea4f059adce3f84add22" name="a8ed34f474bb0ea4f059adce3f84add22"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8ed34f474bb0ea4f059adce3f84add22">&#9670;&#160;</a></span>Y</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">N_Vector gridfire::solver::PointSolverContext::Y = nullptr</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>CVODE state vector (species + energy accumulator). </p>
+
+</div>
+</div>
+<a id="a0152fff56513f0eab79aa1909da507a0" name="a0152fff56513f0eab79aa1909da507a0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0152fff56513f0eab79aa1909da507a0">&#9670;&#160;</a></span>YErr</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
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+<p>Estimated local errors. </p>
+
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+<div id="titlearea">
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+ <tr id="projectrow">
+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
+  </td>
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+<!-- end header part -->
+<!-- Generated by Doxygen 1.13.2 -->
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+<div class="header">
+  <div class="headertitle"><div class="title">gridfire::solver::PointSolverTimestepContext Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ab7d9e6258c7b11d04be596a248b8943f">current_neutrino_energy_loss_rate</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a3473e38643070becd4650b278c5c42ff">current_total_energy</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a463e55bef82693821e0cc52890a8a5fe">currentConvergenceFailures</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ad2c3941768d61d828400ea0cbf984bda">currentNonlinearIterations</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a5307efe7f090f77b17d78a6d789d929b">describe</a>() const override</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a976046c4a6a70b1d5bad48a936885250">dt</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ab47a6b0cf09ea0ad87faaca2cca41557">engine</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a5dade04c339a5a5f96cbb144c825b298">getPhysicalComposition</a>() const</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a75a409284ed62215f7285f21f31a672a">last_step_time</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a4a22b9d1c37ceb95cc8b64055fba2f51">networkSpecies</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ac5fd90d8ee8b31790ec3f75bffbc330e">num_steps</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a0493540df76c61ebb2f58214327d3419">PointSolverTimestepContext</a>(double t, const N_Vector &amp;state, double dt, double last_step_time, double t9, double rho, size_t num_steps, const engine::DynamicEngine &amp;engine, const std::vector&lt; fourdst::atomic::Species &gt; &amp;networkSpecies, size_t currentConvergenceFailure, size_t currentNonlinearIterations, const std::map&lt; fourdst::atomic::Species, std::unordered_map&lt; std::string, double &gt; &gt; &amp;reactionContributionMap, engine::scratch::StateBlob &amp;state_ctx)</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ae2c64bfc1ae2ca7eeb59ba42b1d93c16">reactionContributionMap</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a7c4618a9939276f502f18faebd4cbda8">rho</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ae0cc0270ead108365f0345c94f97f175">state</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a9a88f0368ec8e36c804799d0de7a76a0">state_ctx</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ad4c0ed91a8735f3cda2003dc322e3797">t</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a95c44f3e4ececd10edca188b2e0dee2c">T9</a></td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">gridfire::solver::PointSolverTimestepContext</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html#a6c82f2104d1b3f7f1926dddf69912251">~TimestepContextBase</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">gridfire::solver::TimestepContextBase</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
+</table></div><!-- contents -->
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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diff --git a/docs/html/structgridfire_1_1solver_1_1_point_solver_timestep_context.html b/docs/html/structgridfire_1_1solver_1_1_point_solver_timestep_context.html
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+  <td id="projectalign">
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
+   </div>
+   <div id="projectbrief">General Purpose Nuclear Network</div>
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+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="structgridfire_1_1solver_1_1_point_solver_timestep_context-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire::solver::PointSolverTimestepContext Struct Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;PointSolver.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for gridfire::solver::PointSolverTimestepContext:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_point_solver_timestep_context__inherit__graph.svg" width="190" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+Collaboration diagram for gridfire::solver::PointSolverTimestepContext:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_point_solver_timestep_context__coll__graph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a0493540df76c61ebb2f58214327d3419" id="r_a0493540df76c61ebb2f58214327d3419"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0493540df76c61ebb2f58214327d3419">PointSolverTimestepContext</a> (double <a class="el" href="#ad4c0ed91a8735f3cda2003dc322e3797">t</a>, const N_Vector &amp;<a class="el" href="#ae0cc0270ead108365f0345c94f97f175">state</a>, double <a class="el" href="#a976046c4a6a70b1d5bad48a936885250">dt</a>, double <a class="el" href="#a75a409284ed62215f7285f21f31a672a">last_step_time</a>, double t9, double <a class="el" href="#a7c4618a9939276f502f18faebd4cbda8">rho</a>, size_t <a class="el" href="#ac5fd90d8ee8b31790ec3f75bffbc330e">num_steps</a>, const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;<a class="el" href="#ab47a6b0cf09ea0ad87faaca2cca41557">engine</a>, const std::vector&lt; fourdst::atomic::Species &gt; &amp;<a class="el" href="#a4a22b9d1c37ceb95cc8b64055fba2f51">networkSpecies</a>, size_t currentConvergenceFailure, size_t <a class="el" href="#ad2c3941768d61d828400ea0cbf984bda">currentNonlinearIterations</a>, const std::map&lt; fourdst::atomic::Species, std::unordered_map&lt; std::string, double &gt; &gt; &amp;<a class="el" href="#ae2c64bfc1ae2ca7eeb59ba42b1d93c16">reactionContributionMap</a>, <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;<a class="el" href="#a9a88f0368ec8e36c804799d0de7a76a0">state_ctx</a>)</td></tr>
+<tr class="separator:a0493540df76c61ebb2f58214327d3419"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a5307efe7f090f77b17d78a6d789d929b" id="r_a5307efe7f090f77b17d78a6d789d929b"><td class="memItemLeft" align="right" valign="top">std::vector&lt; std::tuple&lt; std::string, std::string &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5307efe7f090f77b17d78a6d789d929b">describe</a> () const override</td></tr>
+<tr class="memdesc:a5307efe7f090f77b17d78a6d789d929b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Describe the context for callback functions.  <br /></td></tr>
+<tr class="separator:a5307efe7f090f77b17d78a6d789d929b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a5dade04c339a5a5f96cbb144c825b298" id="r_a5dade04c339a5a5f96cbb144c825b298"><td class="memItemLeft" align="right" valign="top">fourdst::composition::Composition&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5dade04c339a5a5f96cbb144c825b298">getPhysicalComposition</a> () const</td></tr>
+<tr class="separator:a5dade04c339a5a5f96cbb144c825b298"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_methods_classgridfire_1_1solver_1_1_timestep_context_base"><td colspan="2" onclick="javascript:dynsection.toggleInherit('pub_methods_classgridfire_1_1solver_1_1_timestep_context_base')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html">gridfire::solver::TimestepContextBase</a></td></tr>
+<tr class="memitem:a6c82f2104d1b3f7f1926dddf69912251 inherit pub_methods_classgridfire_1_1solver_1_1_timestep_context_base" id="r_a6c82f2104d1b3f7f1926dddf69912251"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html#a6c82f2104d1b3f7f1926dddf69912251">~TimestepContextBase</a> ()=default</td></tr>
+<tr class="separator:a6c82f2104d1b3f7f1926dddf69912251 inherit pub_methods_classgridfire_1_1solver_1_1_timestep_context_base"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:ad4c0ed91a8735f3cda2003dc322e3797" id="r_ad4c0ed91a8735f3cda2003dc322e3797"><td class="memItemLeft" align="right" valign="top">const double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad4c0ed91a8735f3cda2003dc322e3797">t</a></td></tr>
+<tr class="memdesc:ad4c0ed91a8735f3cda2003dc322e3797"><td class="mdescLeft">&#160;</td><td class="mdescRight">Current integration time [s].  <br /></td></tr>
+<tr class="separator:ad4c0ed91a8735f3cda2003dc322e3797"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ae0cc0270ead108365f0345c94f97f175" id="r_ae0cc0270ead108365f0345c94f97f175"><td class="memItemLeft" align="right" valign="top">const N_Vector &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae0cc0270ead108365f0345c94f97f175">state</a></td></tr>
+<tr class="memdesc:ae0cc0270ead108365f0345c94f97f175"><td class="mdescLeft">&#160;</td><td class="mdescRight">Current CVODE state vector (N_Vector).  <br /></td></tr>
+<tr class="separator:ae0cc0270ead108365f0345c94f97f175"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a976046c4a6a70b1d5bad48a936885250" id="r_a976046c4a6a70b1d5bad48a936885250"><td class="memItemLeft" align="right" valign="top">const double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a976046c4a6a70b1d5bad48a936885250">dt</a></td></tr>
+<tr class="memdesc:a976046c4a6a70b1d5bad48a936885250"><td class="mdescLeft">&#160;</td><td class="mdescRight">Last step size [s].  <br /></td></tr>
+<tr class="separator:a976046c4a6a70b1d5bad48a936885250"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a75a409284ed62215f7285f21f31a672a" id="r_a75a409284ed62215f7285f21f31a672a"><td class="memItemLeft" align="right" valign="top">const double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a75a409284ed62215f7285f21f31a672a">last_step_time</a></td></tr>
+<tr class="memdesc:a75a409284ed62215f7285f21f31a672a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Time at last callback [s].  <br /></td></tr>
+<tr class="separator:a75a409284ed62215f7285f21f31a672a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a95c44f3e4ececd10edca188b2e0dee2c" id="r_a95c44f3e4ececd10edca188b2e0dee2c"><td class="memItemLeft" align="right" valign="top">const double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a95c44f3e4ececd10edca188b2e0dee2c">T9</a></td></tr>
+<tr class="memdesc:a95c44f3e4ececd10edca188b2e0dee2c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Temperature in GK.  <br /></td></tr>
+<tr class="separator:a95c44f3e4ececd10edca188b2e0dee2c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a7c4618a9939276f502f18faebd4cbda8" id="r_a7c4618a9939276f502f18faebd4cbda8"><td class="memItemLeft" align="right" valign="top">const double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7c4618a9939276f502f18faebd4cbda8">rho</a></td></tr>
+<tr class="memdesc:a7c4618a9939276f502f18faebd4cbda8"><td class="mdescLeft">&#160;</td><td class="mdescRight">Density [g cm^-3].  <br /></td></tr>
+<tr class="separator:a7c4618a9939276f502f18faebd4cbda8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ac5fd90d8ee8b31790ec3f75bffbc330e" id="r_ac5fd90d8ee8b31790ec3f75bffbc330e"><td class="memItemLeft" align="right" valign="top">const size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ac5fd90d8ee8b31790ec3f75bffbc330e">num_steps</a></td></tr>
+<tr class="memdesc:ac5fd90d8ee8b31790ec3f75bffbc330e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Number of CVODE steps taken so far.  <br /></td></tr>
+<tr class="separator:ac5fd90d8ee8b31790ec3f75bffbc330e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab47a6b0cf09ea0ad87faaca2cca41557" id="r_ab47a6b0cf09ea0ad87faaca2cca41557"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab47a6b0cf09ea0ad87faaca2cca41557">engine</a></td></tr>
+<tr class="memdesc:ab47a6b0cf09ea0ad87faaca2cca41557"><td class="mdescLeft">&#160;</td><td class="mdescRight">Reference to the engine.  <br /></td></tr>
+<tr class="separator:ab47a6b0cf09ea0ad87faaca2cca41557"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4a22b9d1c37ceb95cc8b64055fba2f51" id="r_a4a22b9d1c37ceb95cc8b64055fba2f51"><td class="memItemLeft" align="right" valign="top">const std::vector&lt; fourdst::atomic::Species &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4a22b9d1c37ceb95cc8b64055fba2f51">networkSpecies</a></td></tr>
+<tr class="memdesc:a4a22b9d1c37ceb95cc8b64055fba2f51"><td class="mdescLeft">&#160;</td><td class="mdescRight">Species layout.  <br /></td></tr>
+<tr class="separator:a4a22b9d1c37ceb95cc8b64055fba2f51"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a463e55bef82693821e0cc52890a8a5fe" id="r_a463e55bef82693821e0cc52890a8a5fe"><td class="memItemLeft" align="right" valign="top">const size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a463e55bef82693821e0cc52890a8a5fe">currentConvergenceFailures</a></td></tr>
+<tr class="memdesc:a463e55bef82693821e0cc52890a8a5fe"><td class="mdescLeft">&#160;</td><td class="mdescRight">Total number of convergence failures.  <br /></td></tr>
+<tr class="separator:a463e55bef82693821e0cc52890a8a5fe"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ad2c3941768d61d828400ea0cbf984bda" id="r_ad2c3941768d61d828400ea0cbf984bda"><td class="memItemLeft" align="right" valign="top">const size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad2c3941768d61d828400ea0cbf984bda">currentNonlinearIterations</a></td></tr>
+<tr class="memdesc:ad2c3941768d61d828400ea0cbf984bda"><td class="mdescLeft">&#160;</td><td class="mdescRight">Total number of non-linear iterations.  <br /></td></tr>
+<tr class="separator:ad2c3941768d61d828400ea0cbf984bda"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ae2c64bfc1ae2ca7eeb59ba42b1d93c16" id="r_ae2c64bfc1ae2ca7eeb59ba42b1d93c16"><td class="memItemLeft" align="right" valign="top">const std::map&lt; fourdst::atomic::Species, std::unordered_map&lt; std::string, double &gt; &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae2c64bfc1ae2ca7eeb59ba42b1d93c16">reactionContributionMap</a></td></tr>
+<tr class="memdesc:ae2c64bfc1ae2ca7eeb59ba42b1d93c16"><td class="mdescLeft">&#160;</td><td class="mdescRight">Map of reaction contributions for the current step.  <br /></td></tr>
+<tr class="separator:ae2c64bfc1ae2ca7eeb59ba42b1d93c16"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a9a88f0368ec8e36c804799d0de7a76a0" id="r_a9a88f0368ec8e36c804799d0de7a76a0"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a9a88f0368ec8e36c804799d0de7a76a0">state_ctx</a></td></tr>
+<tr class="memdesc:a9a88f0368ec8e36c804799d0de7a76a0"><td class="mdescLeft">&#160;</td><td class="mdescRight">Reference to the engine scratch state blob.  <br /></td></tr>
+<tr class="separator:a9a88f0368ec8e36c804799d0de7a76a0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3473e38643070becd4650b278c5c42ff" id="r_a3473e38643070becd4650b278c5c42ff"><td class="memItemLeft" align="right" valign="top">double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3473e38643070becd4650b278c5c42ff">current_total_energy</a> = 0.0</td></tr>
+<tr class="memdesc:a3473e38643070becd4650b278c5c42ff"><td class="mdescLeft">&#160;</td><td class="mdescRight">Current energy generation rate [erg/g/s].  <br /></td></tr>
+<tr class="separator:a3473e38643070becd4650b278c5c42ff"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab7d9e6258c7b11d04be596a248b8943f" id="r_ab7d9e6258c7b11d04be596a248b8943f"><td class="memItemLeft" align="right" valign="top">double&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab7d9e6258c7b11d04be596a248b8943f">current_neutrino_energy_loss_rate</a> = 0.0</td></tr>
+<tr class="memdesc:ab7d9e6258c7b11d04be596a248b8943f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Current neutrino energy loss rate [erg/g/s].  <br /></td></tr>
+<tr class="separator:ab7d9e6258c7b11d04be596a248b8943f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a0493540df76c61ebb2f58214327d3419" name="a0493540df76c61ebb2f58214327d3419"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0493540df76c61ebb2f58214327d3419">&#9670;&#160;</a></span>PointSolverTimestepContext()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">gridfire::solver::PointSolverTimestepContext::PointSolverTimestepContext </td>
+          <td>(</td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const N_Vector &amp;</td>          <td class="paramname"><span class="paramname"><em>state</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>dt</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>last_step_time</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>t9</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>num_steps</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>engine</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::vector&lt; fourdst::atomic::Species &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>networkSpecies</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>currentConvergenceFailure</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">size_t</td>          <td class="paramname"><span class="paramname"><em>currentNonlinearIterations</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">const std::map&lt; fourdst::atomic::Species, std::unordered_map&lt; std::string, double &gt; &gt; &amp;</td>          <td class="paramname"><span class="paramname"><em>reactionContributionMap</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>state_ctx</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a5307efe7f090f77b17d78a6d789d929b" name="a5307efe7f090f77b17d78a6d789d929b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5307efe7f090f77b17d78a6d789d929b">&#9670;&#160;</a></span>describe()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">std::vector&lt; std::tuple&lt; std::string, std::string &gt; &gt; gridfire::solver::PointSolverTimestepContext::describe </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel override">override</span><span class="mlabel virtual">virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Describe the context for callback functions. </p>
+<dl class="section return"><dt>Returns</dt><dd>A vector of tuples, each containing a string for the parameters name and a string for its type.</dd></dl>
+<p>This method should be overridden by derived classes to provide a description of the context that will be passed to the callback function. The intent of this method is that an end user can investigate the context that will be passed to the callback function, and use this information to craft their own callback function. </p>
+
+<p>Implements <a class="el" href="classgridfire_1_1solver_1_1_timestep_context_base.html#a58b7962bb4196b5f4999576b151250da">gridfire::solver::TimestepContextBase</a>.</p>
+
+</div>
+</div>
+<a id="a5dade04c339a5a5f96cbb144c825b298" name="a5dade04c339a5a5f96cbb144c825b298"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5dade04c339a5a5f96cbb144c825b298">&#9670;&#160;</a></span>getPhysicalComposition()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">fourdst::composition::Composition gridfire::solver::PointSolverTimestepContext::getPhysicalComposition </td>
+          <td>(</td>
+          <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
+          <td> const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="ab7d9e6258c7b11d04be596a248b8943f" name="ab7d9e6258c7b11d04be596a248b8943f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab7d9e6258c7b11d04be596a248b8943f">&#9670;&#160;</a></span>current_neutrino_energy_loss_rate</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::solver::PointSolverTimestepContext::current_neutrino_energy_loss_rate = 0.0</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Current neutrino energy loss rate [erg/g/s]. </p>
+
+</div>
+</div>
+<a id="a3473e38643070becd4650b278c5c42ff" name="a3473e38643070becd4650b278c5c42ff"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3473e38643070becd4650b278c5c42ff">&#9670;&#160;</a></span>current_total_energy</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">double gridfire::solver::PointSolverTimestepContext::current_total_energy = 0.0</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Current energy generation rate [erg/g/s]. </p>
+
+</div>
+</div>
+<a id="a463e55bef82693821e0cc52890a8a5fe" name="a463e55bef82693821e0cc52890a8a5fe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a463e55bef82693821e0cc52890a8a5fe">&#9670;&#160;</a></span>currentConvergenceFailures</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const size_t gridfire::solver::PointSolverTimestepContext::currentConvergenceFailures</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Total number of convergence failures. </p>
+
+</div>
+</div>
+<a id="ad2c3941768d61d828400ea0cbf984bda" name="ad2c3941768d61d828400ea0cbf984bda"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad2c3941768d61d828400ea0cbf984bda">&#9670;&#160;</a></span>currentNonlinearIterations</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const size_t gridfire::solver::PointSolverTimestepContext::currentNonlinearIterations</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Total number of non-linear iterations. </p>
+
+</div>
+</div>
+<a id="a976046c4a6a70b1d5bad48a936885250" name="a976046c4a6a70b1d5bad48a936885250"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a976046c4a6a70b1d5bad48a936885250">&#9670;&#160;</a></span>dt</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const double gridfire::solver::PointSolverTimestepContext::dt</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Last step size [s]. </p>
+
+</div>
+</div>
+<a id="ab47a6b0cf09ea0ad87faaca2cca41557" name="ab47a6b0cf09ea0ad87faaca2cca41557"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab47a6b0cf09ea0ad87faaca2cca41557">&#9670;&#160;</a></span>engine</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const <a class="el" href="classgridfire_1_1engine_1_1_dynamic_engine.html">engine::DynamicEngine</a>&amp; gridfire::solver::PointSolverTimestepContext::engine</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Reference to the engine. </p>
+
+</div>
+</div>
+<a id="a75a409284ed62215f7285f21f31a672a" name="a75a409284ed62215f7285f21f31a672a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a75a409284ed62215f7285f21f31a672a">&#9670;&#160;</a></span>last_step_time</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const double gridfire::solver::PointSolverTimestepContext::last_step_time</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Time at last callback [s]. </p>
+
+</div>
+</div>
+<a id="a4a22b9d1c37ceb95cc8b64055fba2f51" name="a4a22b9d1c37ceb95cc8b64055fba2f51"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4a22b9d1c37ceb95cc8b64055fba2f51">&#9670;&#160;</a></span>networkSpecies</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const std::vector&lt;fourdst::atomic::Species&gt;&amp; gridfire::solver::PointSolverTimestepContext::networkSpecies</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Species layout. </p>
+
+</div>
+</div>
+<a id="ac5fd90d8ee8b31790ec3f75bffbc330e" name="ac5fd90d8ee8b31790ec3f75bffbc330e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac5fd90d8ee8b31790ec3f75bffbc330e">&#9670;&#160;</a></span>num_steps</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const size_t gridfire::solver::PointSolverTimestepContext::num_steps</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Number of CVODE steps taken so far. </p>
+
+</div>
+</div>
+<a id="ae2c64bfc1ae2ca7eeb59ba42b1d93c16" name="ae2c64bfc1ae2ca7eeb59ba42b1d93c16"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae2c64bfc1ae2ca7eeb59ba42b1d93c16">&#9670;&#160;</a></span>reactionContributionMap</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const std::map&lt;fourdst::atomic::Species, std::unordered_map&lt;std::string, double&gt; &gt;&amp; gridfire::solver::PointSolverTimestepContext::reactionContributionMap</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Map of reaction contributions for the current step. </p>
+
+</div>
+</div>
+<a id="a7c4618a9939276f502f18faebd4cbda8" name="a7c4618a9939276f502f18faebd4cbda8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7c4618a9939276f502f18faebd4cbda8">&#9670;&#160;</a></span>rho</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const double gridfire::solver::PointSolverTimestepContext::rho</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Density [g cm^-3]. </p>
+
+</div>
+</div>
+<a id="ae0cc0270ead108365f0345c94f97f175" name="ae0cc0270ead108365f0345c94f97f175"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae0cc0270ead108365f0345c94f97f175">&#9670;&#160;</a></span>state</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const N_Vector&amp; gridfire::solver::PointSolverTimestepContext::state</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Current CVODE state vector (N_Vector). </p>
+
+</div>
+</div>
+<a id="a9a88f0368ec8e36c804799d0de7a76a0" name="a9a88f0368ec8e36c804799d0de7a76a0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9a88f0368ec8e36c804799d0de7a76a0">&#9670;&#160;</a></span>state_ctx</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">engine::scratch::StateBlob</a>&amp; gridfire::solver::PointSolverTimestepContext::state_ctx</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Reference to the engine scratch state blob. </p>
+
+</div>
+</div>
+<a id="ad4c0ed91a8735f3cda2003dc322e3797" name="ad4c0ed91a8735f3cda2003dc322e3797"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad4c0ed91a8735f3cda2003dc322e3797">&#9670;&#160;</a></span>t</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const double gridfire::solver::PointSolverTimestepContext::t</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Current integration time [s]. </p>
+
+</div>
+</div>
+<a id="a95c44f3e4ececd10edca188b2e0dee2c" name="a95c44f3e4ececd10edca188b2e0dee2c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a95c44f3e4ececd10edca188b2e0dee2c">&#9670;&#160;</a></span>T9</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">const double gridfire::solver::PointSolverTimestepContext::T9</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Temperature in GK. </p>
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following files:<ul>
+<li>src/include/gridfire/solver/strategies/<a class="el" href="_point_solver_8h.html">PointSolver.h</a></li>
+<li>src/lib/solver/strategies/<a class="el" href="_point_solver_8cpp.html">PointSolver.cpp</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
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+  <ul>
+    <li class="navelem"><a class="el" href="namespacegridfire.html">gridfire</a></li><li class="navelem"><a class="el" href="namespacegridfire_1_1solver.html">solver</a></li><li class="navelem"><a class="el" href="structgridfire_1_1solver_1_1_point_solver_timestep_context.html">PointSolverTimestepContext</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
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+var structgridfire_1_1solver_1_1_point_solver_timestep_context =
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+    [ "current_total_energy", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a3473e38643070becd4650b278c5c42ff", null ],
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+    [ "engine", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ab47a6b0cf09ea0ad87faaca2cca41557", null ],
+    [ "last_step_time", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a75a409284ed62215f7285f21f31a672a", null ],
+    [ "networkSpecies", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a4a22b9d1c37ceb95cc8b64055fba2f51", null ],
+    [ "num_steps", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ac5fd90d8ee8b31790ec3f75bffbc330e", null ],
+    [ "reactionContributionMap", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ae2c64bfc1ae2ca7eeb59ba42b1d93c16", null ],
+    [ "rho", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a7c4618a9939276f502f18faebd4cbda8", null ],
+    [ "state", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ae0cc0270ead108365f0345c94f97f175", null ],
+    [ "state_ctx", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a9a88f0368ec8e36c804799d0de7a76a0", null ],
+    [ "t", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#ad4c0ed91a8735f3cda2003dc322e3797", null ],
+    [ "T9", "structgridfire_1_1solver_1_1_point_solver_timestep_context.html#a95c44f3e4ececd10edca188b2e0dee2c", null ]
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+++ b/docs/html/structgridfire_1_1solver_1_1_solver_context_base-members.html
@@ -29,7 +29,7 @@
  <tbody>
  <tr id="projectrow">
   <td id="projectalign">
-   <div id="projectname">GridFire<span id="projectnumber">&#160;0.6.0</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
    </div>
    <div id="projectbrief">General Purpose Nuclear Network</div>
   </td>
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 <p>This is the complete list of members for <a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a>, including all inherited members.</p>
 <table class="directory">
-  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a9cbef3cabc8524e542613ee50d8860c6">describe</a>() const =0</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#ae324568d7ca41599f1ea924f06284da0">init</a>()=0</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a4b8185f8b9d46d19d0b0c2bfba16391f">set_detailed_logging</a>(bool enable)=0</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html#a693d8ad4649456ff3cf956072614a2e7">set_stdout_logging</a>(bool enable)=0</td><td class="entry"><a class="el" href="structgridfire_1_1solver_1_1_solver_context_base.html">gridfire::solver::SolverContextBase</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
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diff --git a/docs/html/structgridfire_1_1solver_1_1_solver_context_base.html b/docs/html/structgridfire_1_1solver_1_1_solver_context_base.html
index a40c39da..fc2dbf66 100644
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  <tbody>
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-   <div id="projectname">GridFire<span id="projectnumber">&#160;0.6.0</span>
+   <div id="projectname">GridFire<span id="projectnumber">&#160;v0.7.6rc4.0</span>
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    <div id="projectbrief">General Purpose Nuclear Network</div>
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 <div class="contents">
 
-<p>Base class for solver callback contexts.  
- <a href="#details">More...</a></p>
-
-<p><code>#include &lt;solver.h&gt;</code></p>
+<p><code>#include &lt;strategy_abstract.h&gt;</code></p>
 <div class="dynheader">
 Inheritance diagram for gridfire::solver::SolverContextBase:</div>
 <div class="dyncontent">
- <div class="center">
-  <img src="structgridfire_1_1solver_1_1_solver_context_base.png" usemap="#gridfire::solver::SolverContextBase_map" alt=""/>
-  <map id="gridfire::solver::SolverContextBase_map" name="gridfire::solver::SolverContextBase_map">
-<area href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html" title="Immutable view of the current integration state passed to callbacks." alt="gridfire::solver::CVODESolverStrategy::TimestepContext" shape="rect" coords="0,56,326,80"/>
-  </map>
-</div></div>
+<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire_1_1solver_1_1_solver_context_base__inherit__graph.svg" width="386" height="167"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
 Public Member Functions</h2></td></tr>
+<tr class="memitem:ae324568d7ca41599f1ea924f06284da0" id="r_ae324568d7ca41599f1ea924f06284da0"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae324568d7ca41599f1ea924f06284da0">init</a> ()=0</td></tr>
+<tr class="separator:ae324568d7ca41599f1ea924f06284da0"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a693d8ad4649456ff3cf956072614a2e7"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4b8185f8b9d46d19d0b0c2bfba16391f" id="r_a4b8185f8b9d46d19d0b0c2bfba16391f"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4b8185f8b9d46d19d0b0c2bfba16391f">set_detailed_logging</a> (bool enable)=0</td></tr>
+<tr class="separator:a4b8185f8b9d46d19d0b0c2bfba16391f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:ab1abf9e5ff7f53a6cebe5e00ea5fc0c8" id="r_ab1abf9e5ff7f53a6cebe5e00ea5fc0c8"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">~SolverContextBase</a> ()=default</td></tr>
 <tr class="separator:ab1abf9e5ff7f53a6cebe5e00ea5fc0c8"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="memdesc:a9cbef3cabc8524e542613ee50d8860c6"><td class="mdescLeft">&#160;</td><td class="mdescRight">Describe the context for callback functions.  <br /></td></tr>
-<tr class="separator:a9cbef3cabc8524e542613ee50d8860c6"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
-<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
-<div class="textblock"><p>Base class for solver callback contexts. </p>
-<p>This struct serves as a base class for contexts that can be passed to solver callbacks, it enforces that derived classes implement a <code>describe</code> method that returns a vector of tuples describing the context that a callback will receive when called. </p>
-</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
 <a id="ab1abf9e5ff7f53a6cebe5e00ea5fc0c8" name="ab1abf9e5ff7f53a6cebe5e00ea5fc0c8"></a>
 <h2 class="memtitle"><span class="permalink"><a href="#ab1abf9e5ff7f53a6cebe5e00ea5fc0c8">&#9670;&#160;</a></span>~SolverContextBase()</h2>
 
@@ -158,8 +151,8 @@ Public Member Functions</h2></td></tr>
 </div>
 </div>
 <h2 class="groupheader">Member Function Documentation</h2>
-<a id="a9cbef3cabc8524e542613ee50d8860c6" name="a9cbef3cabc8524e542613ee50d8860c6"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a9cbef3cabc8524e542613ee50d8860c6">&#9670;&#160;</a></span>describe()</h2>
+<a id="ae324568d7ca41599f1ea924f06284da0" name="ae324568d7ca41599f1ea924f06284da0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae324568d7ca41599f1ea924f06284da0">&#9670;&#160;</a></span>init()</h2>
 
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@@ -168,29 +161,79 @@ Public Member Functions</h2></td></tr>
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-          <td class="memname">virtual std::vector&lt; std::tuple&lt; std::string, std::string &gt; &gt; gridfire::solver::SolverContextBase::describe </td>
+          <td class="memname">virtual void gridfire::solver::SolverContextBase::init </td>
           <td>(</td>
           <td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
-          <td> const</td>
+          <td></td>
         </tr>
       </table>
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   <td class="mlabels-right">
-<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
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-<p>Describe the context for callback functions. </p>
-<dl class="section return"><dt>Returns</dt><dd>A vector of tuples, each containing a string for the parameters name and a string for its type.</dd></dl>
-<p>This method should be overridden by derived classes to provide a description of the context that will be passed to the callback function. The intent of this method is that an end user can investigate the context that will be passed to the callback function, and use this information to craft their own callback function. </p>
+<p>Implemented in <a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a58a8e377f76fbb26f11da469411faaaa">gridfire::solver::GridSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#af20bd86770e817a82babaf719b3b4003">gridfire::solver::PointSolverContext</a>, and <a class="el" href="class_py_solver_context_base.html#ac68080cd0e7aa2884ce628925e8cf932">PySolverContextBase</a>.</p>
 
-<p>Implemented in <a class="el" href="structgridfire_1_1solver_1_1_c_v_o_d_e_solver_strategy_1_1_timestep_context.html#ae3c6320ce7a8f41c9ae36c42d62b4204">gridfire::solver::CVODESolverStrategy::TimestepContext</a>.</p>
+</div>
+</div>
+<a id="a4b8185f8b9d46d19d0b0c2bfba16391f" name="a4b8185f8b9d46d19d0b0c2bfba16391f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4b8185f8b9d46d19d0b0c2bfba16391f">&#9670;&#160;</a></span>set_detailed_logging()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual void gridfire::solver::SolverContextBase::set_detailed_logging </td>
+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implemented in <a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#a02215c68ebc4a488343aabb495791c77">gridfire::solver::GridSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#ad78dbc3cf9da0a5e508f08343f2c6da5">gridfire::solver::PointSolverContext</a>, and <a class="el" href="class_py_solver_context_base.html#a2400e5ab20fe2e5c31a712cb9b24aebe">PySolverContextBase</a>.</p>
+
+</div>
+</div>
+<a id="a693d8ad4649456ff3cf956072614a2e7" name="a693d8ad4649456ff3cf956072614a2e7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a693d8ad4649456ff3cf956072614a2e7">&#9670;&#160;</a></span>set_stdout_logging()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">virtual void gridfire::solver::SolverContextBase::set_stdout_logging </td>
+          <td>(</td>
+          <td class="paramtype">bool</td>          <td class="paramname"><span class="paramname"><em>enable</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel pure-virtual">pure virtual</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+<p>Implemented in <a class="el" href="structgridfire_1_1solver_1_1_grid_solver_context.html#af90f3a9d7f688b52cd3ee201af6b0b7f">gridfire::solver::GridSolverContext</a>, <a class="el" href="structgridfire_1_1solver_1_1_point_solver_context.html#aa9a3442738429f362a9f10fe92d5a1ea">gridfire::solver::PointSolverContext</a>, and <a class="el" href="class_py_solver_context_base.html#af8f861a94e0a6654a8f9b752a28ad0e7">PySolverContextBase</a>.</p>
 
 </div>
 </div>
 <hr/>The documentation for this struct was generated from the following file:<ul>
-<li>src/include/gridfire/solver/<a class="el" href="solver_8h.html">solver.h</a></li>
+<li>src/include/gridfire/solver/strategies/<a class="el" href="strategy__abstract_8h.html">strategy_abstract.h</a></li>
 </ul>
 </div><!-- contents -->
 </div><!-- doc-content -->
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+
+<div class="header">
+  <div class="summary">
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="structgridfire__mod_1_1gf__type-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">gridfire_mod::gf_type Type Reference</div></div>
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+  <tr class="even"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#a3404cadb40ea5287e9cc3472129cd456">gff_evolve</a>(self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#a3404cadb40ea5287e9cc3472129cd456">gff_evolve</a>(self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#a86de88c6b7d6c181361e1bce220c7f46">gff_free</a>(self)</td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#a8bccaeec1800bf22aa5feb992ebb0991">gff_get_last_error</a>(self)</td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#a883ee20a7735a1a11e12cda9a4f231a1">gff_init</a>(self, type, zones)</td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#ab55f52e0ebb8785df56541afa631a354">gff_register_species</a>(self, species_list)</td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
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+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#a7aab879c62f4cb920042ecdd6bc087e5">gff_setup_solver</a>(self, solver_name)</td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#ad4e967702e2d02d33589d23ecf0234d4">num_species</a></td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html#a12753bdefdcd195baf0b72858e9f9ed4">num_zones</a></td><td class="entry"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire_mod::gridfire</a></td><td class="entry"></td></tr>
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@@ -99,143 +106,360 @@ $(document).ready(function(){initNavTree('structgridfire__mod_1_1gridfire.html',
   <div class="headertitle"><div class="title">gridfire_mod::gridfire Type Reference</div></div>
 </div><!--header-->
 <div class="contents">
-<div class="dynheader">
-Collaboration diagram for gridfire_mod::gridfire:</div>
-<div class="dyncontent">
-<div class="center"><iframe scrolling="no" frameborder="0" src="structgridfire__mod_1_1gridfire__coll__graph.svg" width="170" height="124"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
-<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
 <table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
 Public Member Functions</h2></td></tr>
-<tr class="memitem:a72415e2f4ff6b74cbc38316a4df8792f" id="r_a72415e2f4ff6b74cbc38316a4df8792f"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire__mod_1_1gridfire.html#a72415e2f4ff6b74cbc38316a4df8792f">gff_init</a> (self)</td></tr>
-<tr class="separator:a72415e2f4ff6b74cbc38316a4df8792f"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:a883ee20a7735a1a11e12cda9a4f231a1" id="r_a883ee20a7735a1a11e12cda9a4f231a1"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a883ee20a7735a1a11e12cda9a4f231a1">gff_init</a> (self, type, zones)</td></tr>
+<tr class="separator:a883ee20a7735a1a11e12cda9a4f231a1"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a86de88c6b7d6c181361e1bce220c7f46" id="r_a86de88c6b7d6c181361e1bce220c7f46"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a86de88c6b7d6c181361e1bce220c7f46">gff_free</a> (self)</td></tr>
 <tr class="separator:a86de88c6b7d6c181361e1bce220c7f46"><td class="memSeparator" colspan="2">&#160;</td></tr>
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-<tr class="separator:abfe3f8c818080814a6d45a0cab83107c"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a2537a8b237e390fefea02ae2da46f851" id="r_a2537a8b237e390fefea02ae2da46f851"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire__mod_1_1gridfire.html#a2537a8b237e390fefea02ae2da46f851">setup_policy</a> (self, policy_name, abundances)</td></tr>
-<tr class="separator:a2537a8b237e390fefea02ae2da46f851"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a973855fa1cc81b0afd5a599cec1d6fcf" id="r_a973855fa1cc81b0afd5a599cec1d6fcf"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire__mod_1_1gridfire.html#a973855fa1cc81b0afd5a599cec1d6fcf">setup_solver</a> (self, solver_name)</td></tr>
-<tr class="separator:a973855fa1cc81b0afd5a599cec1d6fcf"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:a6d864e135a5c93f3c57eafbc3622a6aa" id="r_a6d864e135a5c93f3c57eafbc3622a6aa"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire__mod_1_1gridfire.html#a6d864e135a5c93f3c57eafbc3622a6aa">evolve</a> (self, y_in, t, rho, dt, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
-<tr class="separator:a6d864e135a5c93f3c57eafbc3622a6aa"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:aa88436f1a449988744973e43fe70e76b" id="r_aa88436f1a449988744973e43fe70e76b"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire__mod_1_1gridfire.html#aa88436f1a449988744973e43fe70e76b">get_last_error</a> (self)</td></tr>
-<tr class="separator:aa88436f1a449988744973e43fe70e76b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab55f52e0ebb8785df56541afa631a354" id="r_ab55f52e0ebb8785df56541afa631a354"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab55f52e0ebb8785df56541afa631a354">gff_register_species</a> (self, species_list)</td></tr>
+<tr class="separator:ab55f52e0ebb8785df56541afa631a354"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a008f81b5c059e82bd7a46f7d53e9e20f" id="r_a008f81b5c059e82bd7a46f7d53e9e20f"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a008f81b5c059e82bd7a46f7d53e9e20f">gff_setup_policy</a> (self, policy_name, abundances)</td></tr>
+<tr class="separator:a008f81b5c059e82bd7a46f7d53e9e20f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a7aab879c62f4cb920042ecdd6bc087e5" id="r_a7aab879c62f4cb920042ecdd6bc087e5"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a7aab879c62f4cb920042ecdd6bc087e5">gff_setup_solver</a> (self, solver_name)</td></tr>
+<tr class="separator:a7aab879c62f4cb920042ecdd6bc087e5"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8bccaeec1800bf22aa5feb992ebb0991" id="r_a8bccaeec1800bf22aa5feb992ebb0991"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8bccaeec1800bf22aa5feb992ebb0991">gff_get_last_error</a> (self)</td></tr>
+<tr class="separator:a8bccaeec1800bf22aa5feb992ebb0991"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a810642b2160b9fcec6aeb9da0b40b3a0" id="r_a810642b2160b9fcec6aeb9da0b40b3a0"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a810642b2160b9fcec6aeb9da0b40b3a0">gff_evolve_single</a> (self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
+<tr class="separator:a810642b2160b9fcec6aeb9da0b40b3a0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ad071c30fb2751b8c641dbf4ae29acfe9" id="r_ad071c30fb2751b8c641dbf4ae29acfe9"><td class="memItemLeft" align="right" valign="top">procedure&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad071c30fb2751b8c641dbf4ae29acfe9">gff_evolve_multi</a> (self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
+<tr class="separator:ad071c30fb2751b8c641dbf4ae29acfe9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3404cadb40ea5287e9cc3472129cd456" id="r_a3404cadb40ea5287e9cc3472129cd456"><td class="memItemLeft" align="right" valign="top">generic&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3404cadb40ea5287e9cc3472129cd456">gff_evolve</a> (self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
+<tr class="separator:a3404cadb40ea5287e9cc3472129cd456"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3404cadb40ea5287e9cc3472129cd456" id="r_a3404cadb40ea5287e9cc3472129cd456"><td class="memItemLeft" align="right" valign="top">generic&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3404cadb40ea5287e9cc3472129cd456">gff_evolve</a> (self, y_in, t, rho, tmax, dt0, y_out, energy, dedt, dedrho, nu_e_loss, nu_flux, mass_lost, ierr)</td></tr>
+<tr class="separator:a3404cadb40ea5287e9cc3472129cd456"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table><table class="memberdecls">
 <tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
 Public Attributes</h2></td></tr>
-<tr class="memitem:a8e15e0b0839783747bc7b046c56b3610" id="r_a8e15e0b0839783747bc7b046c56b3610"><td class="memItemLeft" align="right" valign="top">type(c_ptr)&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire__mod_1_1gridfire.html#a8e15e0b0839783747bc7b046c56b3610">ctx</a> = c_null_ptr</td></tr>
+<tr class="memitem:a8e15e0b0839783747bc7b046c56b3610" id="r_a8e15e0b0839783747bc7b046c56b3610"><td class="memItemLeft" align="right" valign="top">type(c_ptr)&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a8e15e0b0839783747bc7b046c56b3610">ctx</a> = c_null_ptr</td></tr>
 <tr class="separator:a8e15e0b0839783747bc7b046c56b3610"><td class="memSeparator" colspan="2">&#160;</td></tr>
-<tr class="memitem:ad4e967702e2d02d33589d23ecf0234d4" id="r_ad4e967702e2d02d33589d23ecf0234d4"><td class="memItemLeft" align="right" valign="top">integer(c_size_t)&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structgridfire__mod_1_1gridfire.html#ad4e967702e2d02d33589d23ecf0234d4">num_species</a> = 0</td></tr>
+<tr class="memitem:aaebba95942c6db1d51b201d2fde78615" id="r_aaebba95942c6db1d51b201d2fde78615"><td class="memItemLeft" align="right" valign="top">integer(c_int)&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aaebba95942c6db1d51b201d2fde78615">ctx_type</a> = <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42da458c9dcd06d6bf0c8d6e3764725cad5e">SINGLE_ZONE</a>%value</td></tr>
+<tr class="separator:aaebba95942c6db1d51b201d2fde78615"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ad4e967702e2d02d33589d23ecf0234d4" id="r_ad4e967702e2d02d33589d23ecf0234d4"><td class="memItemLeft" align="right" valign="top">integer(c_size_t)&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad4e967702e2d02d33589d23ecf0234d4">num_species</a> = 0</td></tr>
 <tr class="separator:ad4e967702e2d02d33589d23ecf0234d4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a12753bdefdcd195baf0b72858e9f9ed4" id="r_a12753bdefdcd195baf0b72858e9f9ed4"><td class="memItemLeft" align="right" valign="top">integer(c_size_t)&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a12753bdefdcd195baf0b72858e9f9ed4">num_zones</a> = 1</td></tr>
+<tr class="separator:a12753bdefdcd195baf0b72858e9f9ed4"><td class="memSeparator" colspan="2">&#160;</td></tr>
 </table>
 <h2 class="groupheader">Member Function/Subroutine Documentation</h2>
-<a id="a6d864e135a5c93f3c57eafbc3622a6aa" name="a6d864e135a5c93f3c57eafbc3622a6aa"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a6d864e135a5c93f3c57eafbc3622a6aa">&#9670;&#160;</a></span>evolve()</h2>
+<a id="a3404cadb40ea5287e9cc3472129cd456" name="a3404cadb40ea5287e9cc3472129cd456"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3404cadb40ea5287e9cc3472129cd456">&#9670;&#160;</a></span>gff_evolve() <span class="overload">[1/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">procedure gridfire_mod::gridfire::evolve </td>
+          <td class="memname">generic gridfire_mod::gridfire::gff_evolve </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), dimension(:), intent(in)&#160;</td>
-          <td class="paramname"><em>y_in</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), value&#160;</td>
-          <td class="paramname"><em>t</em>, </td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), value&#160;</td>
-          <td class="paramname"><em>rho</em>, </td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), value&#160;</td>
-          <td class="paramname"><em>dt</em>, </td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), dimension(:), intent(out)&#160;</td>
-          <td class="paramname"><em>y_out</em>, </td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>energy</em>, </td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>dedt</em>, </td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>dedrho</em>, </td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>nu_e_loss</em>, </td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>nu_flux</em>, </td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_e_loss</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), intent(out)&#160;</td>
-          <td class="paramname"><em>mass_lost</em>, </td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">integer, intent(out)&#160;</td>
-          <td class="paramname"><em>ierr</em>&#160;</td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>, </td>
         </tr>
         <tr>
+          <td class="paramkey"></td>
           <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">integer, intent(out)</td>          <td class="paramname"><span class="paramname"><em>ierr</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="aa88436f1a449988744973e43fe70e76b" name="aa88436f1a449988744973e43fe70e76b"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#aa88436f1a449988744973e43fe70e76b">&#9670;&#160;</a></span>get_last_error()</h2>
+<a id="a3404cadb40ea5287e9cc3472129cd456" name="a3404cadb40ea5287e9cc3472129cd456"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3404cadb40ea5287e9cc3472129cd456">&#9670;&#160;</a></span>gff_evolve() <span class="overload">[2/2]</span></h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">procedure gridfire_mod::gridfire::get_last_error </td>
+          <td class="memname">generic gridfire_mod::gridfire::gff_evolve </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em></td><td>)</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">real(c_double), dimension(:,:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:,:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_e_loss</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer, intent(out)</td>          <td class="paramname"><span class="paramname"><em>ierr</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ad071c30fb2751b8c641dbf4ae29acfe9" name="ad071c30fb2751b8c641dbf4ae29acfe9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad071c30fb2751b8c641dbf4ae29acfe9">&#9670;&#160;</a></span>gff_evolve_multi()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">procedure gridfire_mod::gridfire::gff_evolve_multi </td>
+          <td>(</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:,:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:,:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_e_loss</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer, intent(out)</td>          <td class="paramname"><span class="paramname"><em>ierr</em></span>&#160;)</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a810642b2160b9fcec6aeb9da0b40b3a0" name="a810642b2160b9fcec6aeb9da0b40b3a0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a810642b2160b9fcec6aeb9da0b40b3a0">&#9670;&#160;</a></span>gff_evolve_single()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">procedure gridfire_mod::gridfire::gff_evolve_single </td>
+          <td>(</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>y_in</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>t</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(in)</td>          <td class="paramname"><span class="paramname"><em>rho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>tmax</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), value</td>          <td class="paramname"><span class="paramname"><em>dt0</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(out)</td>          <td class="paramname"><span class="paramname"><em>y_out</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>energy</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedt</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>dedrho</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_e_loss</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>nu_flux</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">real(c_double), intent(out)</td>          <td class="paramname"><span class="paramname"><em>mass_lost</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer, intent(out)</td>          <td class="paramname"><span class="paramname"><em>ierr</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -251,8 +475,7 @@ Public Attributes</h2></td></tr>
         <tr>
           <td class="memname">procedure gridfire_mod::gridfire::gff_free </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)&#160;</td>
-          <td class="paramname"><em>self</em></td><td>)</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)</td>          <td class="paramname"><span class="paramname"><em>self</em></span></td><td>)</td>
           <td></td>
         </tr>
       </table>
@@ -260,8 +483,25 @@ Public Attributes</h2></td></tr>
 
 </div>
 </div>
-<a id="a72415e2f4ff6b74cbc38316a4df8792f" name="a72415e2f4ff6b74cbc38316a4df8792f"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a72415e2f4ff6b74cbc38316a4df8792f">&#9670;&#160;</a></span>gff_init()</h2>
+<a id="a8bccaeec1800bf22aa5feb992ebb0991" name="a8bccaeec1800bf22aa5feb992ebb0991"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8bccaeec1800bf22aa5feb992ebb0991">&#9670;&#160;</a></span>gff_get_last_error()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">procedure gridfire_mod::gridfire::gff_get_last_error </td>
+          <td>(</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a883ee20a7735a1a11e12cda9a4f231a1" name="a883ee20a7735a1a11e12cda9a4f231a1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a883ee20a7735a1a11e12cda9a4f231a1">&#9670;&#160;</a></span>gff_init()</h2>
 
 <div class="memitem">
 <div class="memproto">
@@ -269,99 +509,85 @@ Public Attributes</h2></td></tr>
         <tr>
           <td class="memname">procedure gridfire_mod::gridfire::gff_init </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(out)&#160;</td>
-          <td class="paramname"><em>self</em></td><td>)</td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(out)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
           <td></td>
+          <td class="paramtype">type(<a class="el" href="structgridfire__mod_1_1gf__type.html">gf_type</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>type</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">integer(c_size_t), intent(in), optional</td>          <td class="paramname"><span class="paramname"><em>zones</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="abfe3f8c818080814a6d45a0cab83107c" name="abfe3f8c818080814a6d45a0cab83107c"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#abfe3f8c818080814a6d45a0cab83107c">&#9670;&#160;</a></span>register_species()</h2>
+<a id="ab55f52e0ebb8785df56541afa631a354" name="ab55f52e0ebb8785df56541afa631a354"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab55f52e0ebb8785df56541afa631a354">&#9670;&#160;</a></span>gff_register_species()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">procedure gridfire_mod::gridfire::register_species </td>
+          <td class="memname">procedure gridfire_mod::gridfire::gff_register_species </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(inout)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">character(len=*), dimension(:), intent(in)&#160;</td>
-          <td class="paramname"><em>species_list</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">character(len=*), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>species_list</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="a2537a8b237e390fefea02ae2da46f851" name="a2537a8b237e390fefea02ae2da46f851"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a2537a8b237e390fefea02ae2da46f851">&#9670;&#160;</a></span>setup_policy()</h2>
+<a id="a008f81b5c059e82bd7a46f7d53e9e20f" name="a008f81b5c059e82bd7a46f7d53e9e20f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a008f81b5c059e82bd7a46f7d53e9e20f">&#9670;&#160;</a></span>gff_setup_policy()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">procedure gridfire_mod::gridfire::setup_policy </td>
+          <td class="memname">procedure gridfire_mod::gridfire::gff_setup_policy </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">character(len=*), intent(in)&#160;</td>
-          <td class="paramname"><em>policy_name</em>, </td>
+          <td class="paramtype">character(len=*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>policy_name</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">real(c_double), dimension(:), intent(in)&#160;</td>
-          <td class="paramname"><em>abundances</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">real(c_double), dimension(:), intent(in)</td>          <td class="paramname"><span class="paramname"><em>abundances</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
 
 </div>
 </div>
-<a id="a973855fa1cc81b0afd5a599cec1d6fcf" name="a973855fa1cc81b0afd5a599cec1d6fcf"></a>
-<h2 class="memtitle"><span class="permalink"><a href="#a973855fa1cc81b0afd5a599cec1d6fcf">&#9670;&#160;</a></span>setup_solver()</h2>
+<a id="a7aab879c62f4cb920042ecdd6bc087e5" name="a7aab879c62f4cb920042ecdd6bc087e5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7aab879c62f4cb920042ecdd6bc087e5">&#9670;&#160;</a></span>gff_setup_solver()</h2>
 
 <div class="memitem">
 <div class="memproto">
       <table class="memname">
         <tr>
-          <td class="memname">procedure gridfire_mod::gridfire::setup_solver </td>
+          <td class="memname">procedure gridfire_mod::gridfire::gff_setup_solver </td>
           <td>(</td>
-          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)&#160;</td>
-          <td class="paramname"><em>self</em>, </td>
+          <td class="paramtype">class(<a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a>), intent(in)</td>          <td class="paramname"><span class="paramname"><em>self</em></span>, </td>
         </tr>
         <tr>
           <td class="paramkey"></td>
           <td></td>
-          <td class="paramtype">character(len=*), intent(in)&#160;</td>
-          <td class="paramname"><em>solver_name</em>&#160;</td>
-        </tr>
-        <tr>
-          <td></td>
-          <td>)</td>
-          <td></td><td></td>
+          <td class="paramtype">character(len=*), intent(in)</td>          <td class="paramname"><span class="paramname"><em>solver_name</em></span>&#160;)</td>
         </tr>
       </table>
 </div><div class="memdoc">
@@ -381,6 +607,20 @@ Public Attributes</h2></td></tr>
       </table>
 </div><div class="memdoc">
 
+</div>
+</div>
+<a id="aaebba95942c6db1d51b201d2fde78615" name="aaebba95942c6db1d51b201d2fde78615"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aaebba95942c6db1d51b201d2fde78615">&#9670;&#160;</a></span>ctx_type</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">integer(c_int) gridfire_mod::gridfire::ctx_type = <a class="el" href="gridfire__extern_8h.html#aef130f2ece7c95a5d172559febbbd42da458c9dcd06d6bf0c8d6e3764725cad5e">SINGLE_ZONE</a>%value</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
 </div>
 </div>
 <a id="ad4e967702e2d02d33589d23ecf0234d4" name="ad4e967702e2d02d33589d23ecf0234d4"></a>
@@ -395,6 +635,20 @@ Public Attributes</h2></td></tr>
       </table>
 </div><div class="memdoc">
 
+</div>
+</div>
+<a id="a12753bdefdcd195baf0b72858e9f9ed4" name="a12753bdefdcd195baf0b72858e9f9ed4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a12753bdefdcd195baf0b72858e9f9ed4">&#9670;&#160;</a></span>num_zones</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">integer(c_size_t) gridfire_mod::gridfire::num_zones = 1</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
 </div>
 </div>
 <hr/>The documentation for this type was generated from the following file:<ul>
@@ -406,7 +660,7 @@ Public Attributes</h2></td></tr>
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
     <li class="navelem"><a class="el" href="namespacegridfire__mod.html">gridfire_mod</a></li><li class="navelem"><a class="el" href="structgridfire__mod_1_1gridfire.html">gridfire</a></li>
-    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.9.8 </li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
   </ul>
 </div>
 </body>
diff --git a/docs/html/structgridfire__mod_1_1gridfire.js b/docs/html/structgridfire__mod_1_1gridfire.js
index 252400cc..63d81b90 100644
--- a/docs/html/structgridfire__mod_1_1gridfire.js
+++ b/docs/html/structgridfire__mod_1_1gridfire.js
@@ -1,12 +1,17 @@
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+<div class="header">
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+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="structstd_1_1formatter_3_01gridfire_1_1_net_in_01_4-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::NetIn &gt; Struct Reference</div></div>
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+<div class="contents">
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+<p><code>#include &lt;types.h&gt;</code></p>
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+Inheritance diagram for std::formatter&lt; gridfire::NetIn &gt;:</div>
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for std::formatter&lt; gridfire::NetIn &gt;:</div>
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
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+<tr class="memitem:ade68d16fc339d70874c8411ecd47cbb4" id="r_ade68d16fc339d70874c8411ecd47cbb4"><td class="memItemLeft" align="right" valign="top">auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ade68d16fc339d70874c8411ecd47cbb4">format</a> (const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;netIn, auto &amp;ctx)</td></tr>
+<tr class="separator:ade68d16fc339d70874c8411ecd47cbb4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="ade68d16fc339d70874c8411ecd47cbb4" name="ade68d16fc339d70874c8411ecd47cbb4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ade68d16fc339d70874c8411ecd47cbb4">&#9670;&#160;</a></span>format()</h2>
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+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_in.html">gridfire::NetIn</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netIn</em></span>, </td>
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+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;)</td>
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+<hr/>The documentation for this struct was generated from the following file:<ul>
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+</ul>
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+</div>
+</div>
+</div>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::NetOut &gt; Struct Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;types.h&gt;</code></p>
+<div class="dynheader">
+Inheritance diagram for std::formatter&lt; gridfire::NetOut &gt;:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4__inherit__graph.svg" width="162" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<div class="dynheader">
+Collaboration diagram for std::formatter&lt; gridfire::NetOut &gt;:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4__coll__graph.svg" width="162" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a0285b08b463c065477d40c9227770b34" id="r_a0285b08b463c065477d40c9227770b34"><td class="memItemLeft" align="right" valign="top">auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a0285b08b463c065477d40c9227770b34">format</a> (const <a class="el" href="structgridfire_1_1_net_out.html">gridfire::NetOut</a> &amp;netOut, auto &amp;ctx)</td></tr>
+<tr class="separator:a0285b08b463c065477d40c9227770b34"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a0285b08b463c065477d40c9227770b34" name="a0285b08b463c065477d40c9227770b34"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0285b08b463c065477d40c9227770b34">&#9670;&#160;</a></span>format()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">auto std::formatter&lt; <a class="el" href="structgridfire_1_1_net_out.html">gridfire::NetOut</a> &gt;::format </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1_net_out.html">gridfire::NetOut</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>netOut</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;)</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/types/<a class="el" href="types_2types_8h.html">types.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacestd.html">std</a></li><li class="navelem"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1_net_out_01_4.html">formatter&lt; gridfire::NetOut &gt;</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+<tr class="separator:a76d68d55b606384472d95bbc96dd0be6"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a76d68d55b606384472d95bbc96dd0be6" name="a76d68d55b606384472d95bbc96dd0be6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a76d68d55b606384472d95bbc96dd0be6">&#9670;&#160;</a></span>format()</h2>
+
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+<div class="memproto">
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+  <tr>
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+      <table class="memname">
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+          <td class="memname">auto std::formatter&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a> &gt;::format </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_abstract_scratch_pad.html">gridfire::engine::scratch::AbstractScratchPad</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>pad</em></span>, </td>
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+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;) const</td>
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+
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+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine_2scratchpads_2formatters_8h.html">formatters.h</a></li>
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+<div class="header">
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+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_01_4-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::engine::scratch::AdaptiveEngineViewScratchPad &gt; Struct Reference</div></div>
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+<p><code>#include &lt;formatters.h&gt;</code></p>
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+Collaboration diagram for std::formatter&lt; gridfire::engine::scratch::AdaptiveEngineViewScratchPad &gt;:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad_01_4__coll__graph.svg" width="228" height="155"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a094a6e321f3e44a21898bfdd1ba8648b" id="r_a094a6e321f3e44a21898bfdd1ba8648b"><td class="memItemLeft" align="right" valign="top">auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a094a6e321f3e44a21898bfdd1ba8648b">format</a> (const <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a> &amp;pad, auto &amp;ctx) const</td></tr>
+<tr class="separator:a094a6e321f3e44a21898bfdd1ba8648b"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a094a6e321f3e44a21898bfdd1ba8648b" name="a094a6e321f3e44a21898bfdd1ba8648b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a094a6e321f3e44a21898bfdd1ba8648b">&#9670;&#160;</a></span>format()</h2>
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+      <table class="memname">
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+          <td class="memname">auto std::formatter&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a> &gt;::format </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_adaptive_engine_view_scratch_pad.html">gridfire::engine::scratch::AdaptiveEngineViewScratchPad</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>pad</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;) const</td>
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+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine_2scratchpads_2formatters_8h.html">formatters.h</a></li>
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+<a href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4-members.html">List of all members</a>  </div>
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+<p><code>#include &lt;formatters.h&gt;</code></p>
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+<div class="dyncontent">
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a471717c7e7e34060b86b111cf78dff25">&#9670;&#160;</a></span>format()</h2>
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+      <table class="memname">
+        <tr>
+          <td class="memname">auto std::formatter&lt; <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a> &gt;::format </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad.html">gridfire::engine::scratch::DefinedEngineViewScratchPad</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>pad</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine_2scratchpads_2formatters_8h.html">formatters.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacestd.html">std</a></li><li class="navelem"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.html">formatter&lt; gridfire::engine::scratch::DefinedEngineViewScratchPad &gt;</a></li>
+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.js b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.js
new file mode 100644
index 00000000..f9918b61
--- /dev/null
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@@ -0,0 +1,4 @@
+var structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4 =
+[
+    [ "format", "structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4.html#a471717c7e7e34060b86b111cf78dff25", null ]
+];
\ No newline at end of file
diff --git a/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph.map b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph.map
new file mode 100644
index 00000000..fda8e976
--- /dev/null
+++ b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph.map
@@ -0,0 +1,5 @@
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diff --git a/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph.md5 b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph.md5
new file mode 100644
index 00000000..f52a728f
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+++ b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph.md5
@@ -0,0 +1 @@
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new file mode 100644
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@@ -0,0 +1,68 @@
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+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 112.25)">
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diff --git a/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph_org.svg b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__coll__graph_org.svg
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+<text xml:space="preserve" text-anchor="start" x="8" y="-28.25" font-family="Helvetica,sans-Serif" font-size="10.00">std::formatter&lt; gridfire</text>
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+<!-- Node2 -->
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diff --git a/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__inherit__graph.map b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__inherit__graph.map
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@@ -0,0 +1,5 @@
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new file mode 100644
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diff --git a/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__inherit__graph_org.svg b/docs/html/structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_defined_engine_view_scratch_pad_01_4__inherit__graph_org.svg
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new file mode 100644
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+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::engine::scratch::GraphEngineScratchPad &gt; Struct Reference</div></div>
+</div><!--header-->
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+<p><code>#include &lt;formatters.h&gt;</code></p>
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
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+Public Member Functions</h2></td></tr>
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+<tr class="separator:a0a1aa2aa1feb7216121b73e61cd6180a"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<h2 class="memtitle"><span class="permalink"><a href="#a0a1aa2aa1feb7216121b73e61cd6180a">&#9670;&#160;</a></span>format()</h2>
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+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_graph_engine_scratch_pad.html">gridfire::engine::scratch::GraphEngineScratchPad</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>pad</em></span>, </td>
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+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;) const</td>
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+<hr/>The documentation for this struct was generated from the following file:<ul>
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+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_01_4-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad &gt; Struct Reference</div></div>
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+<p><code>#include &lt;formatters.h&gt;</code></p>
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+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad_01_4__coll__graph.svg" width="262" height="155"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="structgridfire_1_1engine_1_1scratch_1_1_multiscale_partitioning_engine_view_scratch_pad.html">gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>pad</em></span>, </td>
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+<a href="#pub-methods">Public Member Functions</a> &#124;
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+<a id="a285526b36757df0a8b77ee07919a9d57" name="a285526b36757df0a8b77ee07919a9d57"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a285526b36757df0a8b77ee07919a9d57">&#9670;&#160;</a></span>format()</h2>
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+<div class="memitem">
+<div class="memproto">
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+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">auto std::formatter&lt; <a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">gridfire::engine::scratch::ScratchPadType</a> &gt;::format </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="namespacegridfire_1_1engine_1_1scratch.html#a61cbbc8ec7103cc74fc8e549fd0649be">gridfire::engine::scratch::ScratchPadType</a></td>          <td class="paramname"><span class="paramname"><em>type</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine_2scratchpads_2formatters_8h.html">formatters.h</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
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+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::engine::scratch::StateBlob &gt; Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4.html">std::formatter&lt; gridfire::engine::scratch::StateBlob &gt;</a>, including all inherited members.</p>
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+  <tr class="even"><td class="entry"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4.html#accacd00c3ee75e02fee48eb7a37cdbcf">format</a>(const gridfire::engine::scratch::StateBlob &amp;blob, auto &amp;ctx) const</td><td class="entry"><a class="el" href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4.html">std::formatter&lt; gridfire::engine::scratch::StateBlob &gt;</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
+</table></div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
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+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::engine::scratch::StateBlob &gt; Struct Reference</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p><code>#include &lt;formatters.h&gt;</code></p>
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+Inheritance diagram for std::formatter&lt; gridfire::engine::scratch::StateBlob &gt;:</div>
+<div class="dyncontent">
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+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+Collaboration diagram for std::formatter&lt; gridfire::engine::scratch::StateBlob &gt;:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structstd_1_1formatter_3_01gridfire_1_1engine_1_1scratch_1_1_state_blob_01_4__coll__graph.svg" width="207" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:accacd00c3ee75e02fee48eb7a37cdbcf" id="r_accacd00c3ee75e02fee48eb7a37cdbcf"><td class="memItemLeft" align="right" valign="top">auto&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#accacd00c3ee75e02fee48eb7a37cdbcf">format</a> (const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;blob, auto &amp;ctx) const</td></tr>
+<tr class="separator:accacd00c3ee75e02fee48eb7a37cdbcf"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="accacd00c3ee75e02fee48eb7a37cdbcf" name="accacd00c3ee75e02fee48eb7a37cdbcf"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#accacd00c3ee75e02fee48eb7a37cdbcf">&#9670;&#160;</a></span>format()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">auto std::formatter&lt; <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &gt;::format </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1engine_1_1scratch_1_1_state_blob.html">gridfire::engine::scratch::StateBlob</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>blob</em></span>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">auto &amp;</td>          <td class="paramname"><span class="paramname"><em>ctx</em></span>&#160;) const</td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel inline">inline</span></span>  </td>
+  </tr>
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+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this struct was generated from the following file:<ul>
+<li>src/include/gridfire/engine/scratchpads/<a class="el" href="engine_2scratchpads_2formatters_8h.html">formatters.h</a></li>
+</ul>
+</div><!-- contents -->
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+<a href="#pub-static-methods">Static Public Member Functions</a> &#124;
+<a href="structstd_1_1formatter_3_01gridfire_1_1policy_1_1_network_policy_01_4-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">std::formatter&lt; gridfire::policy::NetworkPolicy &gt; Struct Reference</div></div>
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+
+<p><code>#include &lt;policy_abstract.h&gt;</code></p>
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+Inheritance diagram for std::formatter&lt; gridfire::policy::NetworkPolicy &gt;:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="structstd_1_1formatter_3_01gridfire_1_1policy_1_1_network_policy_01_4__inherit__graph.svg" width="216" height="140"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+<center><span class="legend">[<a target="top" href="graph_legend.html">legend</a>]</span></center></div>
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+Public Member Functions</h2></td></tr>
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+<tr class="memitem:a80e3e81245585871e149d1de0b1718a9"><td class="memTemplItemLeft" align="right" valign="top">auto&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="#a80e3e81245585871e149d1de0b1718a9">format</a> (const <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a> &amp;policy, FormatContext &amp;ctx) const</td></tr>
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+          <td class="memname">auto std::formatter&lt; <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a> &gt;::format </td>
+          <td>(</td>
+          <td class="paramtype">const <a class="el" href="classgridfire_1_1policy_1_1_network_policy.html">gridfire::policy::NetworkPolicy</a> &amp;</td>          <td class="paramname"><span class="paramname"><em>policy</em></span>, </td>
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diff --git a/docs/html/trigger_8h.html b/docs/html/trigger_8h.html
index 15896d6d..d2322864 100644
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+++ b/docs/html/trigger_8h.html
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+    [ "gridfire::trigger::LogicalTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_logical_trigger.html", null ],
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+    [ "gridfire::trigger::OrTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_or_trigger.html", "classgridfire_1_1trigger_1_1_or_trigger" ],
+    [ "gridfire::trigger::NotTrigger< TriggerContextStruct >", "classgridfire_1_1trigger_1_1_not_trigger.html", "classgridfire_1_1trigger_1_1_not_trigger" ],
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 <script type="text/javascript" src="jquery.js"></script>
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+<script type="text/javascript" src="resize.js"></script>
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+<script type="text/javascript">
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+$(function(){initNavTree('trigger__pprint_8h.html',''); initResizable(true); });
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 <div class="textblock"><p>Structured explanation node for trigger evaluations. </p>
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diff --git a/docs/html/weak_8cpp__incl.map b/docs/html/weak_8cpp__incl.map
index bf6df08c..b12603ea 100644
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diff --git a/docs/html/weak__interpolator_8h.js b/docs/html/weak__interpolator_8h.js
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