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docs(docs): rebuilt docs with loads more detail for triggers and weak reactions

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Emily Boudreaux
2025-10-08 11:17:09 -04:00
parent 8a0b5b2c36
commit 274c566726
600 changed files with 39207 additions and 9125 deletions
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@@ -29,7 +29,7 @@
<tbody>
<tr id="projectrow">
<td id="projectalign">
<div id="projectname">GridFire<span id="projectnumber">&#160;0.0.1a</span>
<div id="projectname">GridFire<span id="projectnumber">&#160;0.6.0</span>
</div>
<div id="projectbrief">General Purpose Nuclear Network</div>
</td>
@@ -102,43 +102,35 @@ $(function(){initNavTree('classgridfire_1_1reaction_1_1_reaction_set.html','');
<div class="summary">
<a href="#pub-methods">Public Member Functions</a> &#124;
<a href="#pri-attribs">Private Attributes</a> &#124;
<a href="#friends">Friends</a> &#124;
<a href="classgridfire_1_1reaction_1_1_reaction_set-members.html">List of all members</a> </div>
<div class="headertitle"><div class="title">gridfire::reaction::ReactionSet Class Reference</div></div>
<div class="headertitle"><div class="title">gridfire::reaction::ReactionSet Class Reference<span class="mlabels"><span class="mlabel final">final</span></span></div></div>
</div><!--header-->
<div class="contents">
<p>A collection of <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> objects.
<a href="#details">More...</a></p>
<p><code>#include &lt;<a class="el" href="reaction_8h_source.html">reaction.h</a>&gt;</code></p>
<div class="dynheader">
Inheritance diagram for gridfire::reaction::ReactionSet:</div>
<div class="dyncontent">
<div class="center">
<img src="classgridfire_1_1reaction_1_1_reaction_set.png" usemap="#gridfire::reaction::ReactionSet_map" alt=""/>
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<area href="classgridfire_1_1reaction_1_1_logical_reaction_set.html" title="A collection of LogicalReaction objects." alt="gridfire::reaction::LogicalReactionSet" shape="rect" coords="0,56,219,80"/>
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<p><code>#include &lt;reaction.h&gt;</code></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:afc40e3783576867229fad3115b3d39d3" id="r_afc40e3783576867229fad3115b3d39d3"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#afc40e3783576867229fad3115b3d39d3">ReactionSet</a> (std::vector&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; reactions)</td></tr>
<tr class="memdesc:afc40e3783576867229fad3115b3d39d3"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs a <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html" title="A collection of Reaction objects.">ReactionSet</a> from a vector of reactions. <br /></td></tr>
<tr class="separator:afc40e3783576867229fad3115b3d39d3"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a9a63306b92e23e3651c955ab614084de" id="r_a9a63306b92e23e3651c955ab614084de"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a9a63306b92e23e3651c955ab614084de">ReactionSet</a> (std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; &gt; &amp;&amp;reactions)</td></tr>
<tr class="memdesc:a9a63306b92e23e3651c955ab614084de"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructs a <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> from a vector of reactions. <br /></td></tr>
<tr class="separator:a9a63306b92e23e3651c955ab614084de"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a789dee5d93810b85062e59508fe0adea" id="r_a789dee5d93810b85062e59508fe0adea"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a789dee5d93810b85062e59508fe0adea">ReactionSet</a> (const std::vector&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> * &gt; &amp;reactions)</td></tr>
<tr class="separator:a789dee5d93810b85062e59508fe0adea"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ab9edff40316b42ce41b2f895962c1041" id="r_ab9edff40316b42ce41b2f895962c1041"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ab9edff40316b42ce41b2f895962c1041">ReactionSet</a> ()</td></tr>
<tr class="separator:ab9edff40316b42ce41b2f895962c1041"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:acfe2341ae1f016ad82098b6f5a1efc45" id="r_acfe2341ae1f016ad82098b6f5a1efc45"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#acfe2341ae1f016ad82098b6f5a1efc45">ReactionSet</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;other)</td></tr>
<tr class="memdesc:acfe2341ae1f016ad82098b6f5a1efc45"><td class="mdescLeft">&#160;</td><td class="mdescRight">Copy constructor. <br /></td></tr>
<tr class="separator:acfe2341ae1f016ad82098b6f5a1efc45"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aac890bf7fdf689890d765ff67489520a" id="r_aac890bf7fdf689890d765ff67489520a"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aac890bf7fdf689890d765ff67489520a">operator=</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;other)</td></tr>
<tr class="memdesc:aac890bf7fdf689890d765ff67489520a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Copy assignment operator. <br /></td></tr>
<tr class="separator:aac890bf7fdf689890d765ff67489520a"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a64ca23fc5bdc41b868c3fbeb5aef6d98" id="r_a64ca23fc5bdc41b868c3fbeb5aef6d98"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a64ca23fc5bdc41b868c3fbeb5aef6d98">~ReactionSet</a> ()=default</td></tr>
<tr class="memdesc:a64ca23fc5bdc41b868c3fbeb5aef6d98"><td class="mdescLeft">&#160;</td><td class="mdescRight">Virtual destructor. <br /></td></tr>
<tr class="separator:a64ca23fc5bdc41b868c3fbeb5aef6d98"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:acea41c2ffb010e46bc5cf56f5f244fac" id="r_acea41c2ffb010e46bc5cf56f5f244fac"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#acea41c2ffb010e46bc5cf56f5f244fac">add_reaction</a> (<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> reaction)</td></tr>
<tr class="memdesc:acea41c2ffb010e46bc5cf56f5f244fac"><td class="mdescLeft">&#160;</td><td class="mdescRight">Adds a reaction to the set. <br /></td></tr>
<tr class="separator:acea41c2ffb010e46bc5cf56f5f244fac"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a1177193b1e46b4e5be630028883ab8dd" id="r_a1177193b1e46b4e5be630028883ab8dd"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1177193b1e46b4e5be630028883ab8dd">remove_reaction</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;reaction)</td></tr>
<tr class="memitem:ad9dbc77e93467c95ebda908b53e9a9d1" id="r_ad9dbc77e93467c95ebda908b53e9a9d1"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad9dbc77e93467c95ebda908b53e9a9d1">add_reaction</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;reaction)</td></tr>
<tr class="memdesc:ad9dbc77e93467c95ebda908b53e9a9d1"><td class="mdescLeft">&#160;</td><td class="mdescRight">Adds a reaction to the set. <br /></td></tr>
<tr class="separator:ad9dbc77e93467c95ebda908b53e9a9d1"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ad7e95562ea0860bf492b447341f41fb5" id="r_ad7e95562ea0860bf492b447341f41fb5"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad7e95562ea0860bf492b447341f41fb5">add_reaction</a> (std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; &amp;&amp;reaction)</td></tr>
<tr class="separator:ad7e95562ea0860bf492b447341f41fb5"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a1177193b1e46b4e5be630028883ab8dd" id="r_a1177193b1e46b4e5be630028883ab8dd"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a1177193b1e46b4e5be630028883ab8dd">remove_reaction</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;reaction)</td></tr>
<tr class="memdesc:a1177193b1e46b4e5be630028883ab8dd"><td class="mdescLeft">&#160;</td><td class="mdescRight">Removes a reaction from the set. <br /></td></tr>
<tr class="separator:a1177193b1e46b4e5be630028883ab8dd"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ae5f8078e77a700a8356487fbd69ba387" id="r_ae5f8078e77a700a8356487fbd69ba387"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ae5f8078e77a700a8356487fbd69ba387">contains</a> (const std::string_view &amp;id) const</td></tr>
@@ -147,9 +139,9 @@ Public Member Functions</h2></td></tr>
<tr class="memitem:a2f6b165c86634a68f35032c2267255f8" id="r_a2f6b165c86634a68f35032c2267255f8"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a2f6b165c86634a68f35032c2267255f8">contains</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;reaction) const</td></tr>
<tr class="memdesc:a2f6b165c86634a68f35032c2267255f8"><td class="mdescLeft">&#160;</td><td class="mdescRight">Checks if the set contains the given reaction. <br /></td></tr>
<tr class="separator:a2f6b165c86634a68f35032c2267255f8"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a6b07a81a3500e4e91d3bcd336b66e35d" id="r_a6b07a81a3500e4e91d3bcd336b66e35d"><td class="memItemLeft" align="right" valign="top">virtual size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a6b07a81a3500e4e91d3bcd336b66e35d">size</a> () const</td></tr>
<tr class="memdesc:a6b07a81a3500e4e91d3bcd336b66e35d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Gets the number of reactions in the set. <br /></td></tr>
<tr class="separator:a6b07a81a3500e4e91d3bcd336b66e35d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:af14cf34d7367cb6a6be5191724c2d4cf" id="r_af14cf34d7367cb6a6be5191724c2d4cf"><td class="memItemLeft" align="right" valign="top">size_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af14cf34d7367cb6a6be5191724c2d4cf">size</a> () const</td></tr>
<tr class="memdesc:af14cf34d7367cb6a6be5191724c2d4cf"><td class="mdescLeft">&#160;</td><td class="mdescRight">Gets the number of reactions in the set. <br /></td></tr>
<tr class="separator:af14cf34d7367cb6a6be5191724c2d4cf"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aa8e0d65aafc6e0320690b4906e1bf300" id="r_aa8e0d65aafc6e0320690b4906e1bf300"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aa8e0d65aafc6e0320690b4906e1bf300">clear</a> ()</td></tr>
<tr class="memdesc:aa8e0d65aafc6e0320690b4906e1bf300"><td class="mdescLeft">&#160;</td><td class="mdescRight">Removes all reactions from the set. <br /></td></tr>
<tr class="separator:aa8e0d65aafc6e0320690b4906e1bf300"><td class="memSeparator" colspan="2">&#160;</td></tr>
@@ -162,7 +154,7 @@ Public Member Functions</h2></td></tr>
<tr class="memitem:a4bdf50219d686a6cbc0b3cc5365dc18e" id="r_a4bdf50219d686a6cbc0b3cc5365dc18e"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4bdf50219d686a6cbc0b3cc5365dc18e">contains_product</a> (const fourdst::atomic::Species &amp;species) const</td></tr>
<tr class="memdesc:a4bdf50219d686a6cbc0b3cc5365dc18e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Checks if any reaction in the set contains the given species as a product. <br /></td></tr>
<tr class="separator:a4bdf50219d686a6cbc0b3cc5365dc18e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4057f74ae647b691f4f61f150553c52b" id="r_a4057f74ae647b691f4f61f150553c52b"><td class="memItemLeft" align="right" valign="top">virtual const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4057f74ae647b691f4f61f150553c52b">operator[]</a> (size_t index) const</td></tr>
<tr class="memitem:a4057f74ae647b691f4f61f150553c52b" id="r_a4057f74ae647b691f4f61f150553c52b"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a4057f74ae647b691f4f61f150553c52b">operator[]</a> (size_t index) const</td></tr>
<tr class="memdesc:a4057f74ae647b691f4f61f150553c52b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Accesses a reaction by its index. <br /></td></tr>
<tr class="separator:a4057f74ae647b691f4f61f150553c52b"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a896b4e492ef596d9174aeda4b59c46cd" id="r_a896b4e492ef596d9174aeda4b59c46cd"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a896b4e492ef596d9174aeda4b59c46cd">operator[]</a> (const std::string_view &amp;id) const</td></tr>
@@ -174,9 +166,11 @@ Public Member Functions</h2></td></tr>
<tr class="memitem:a529189f464aebc6b5ac5c717f70e14b8" id="r_a529189f464aebc6b5ac5c717f70e14b8"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a529189f464aebc6b5ac5c717f70e14b8">operator!=</a> (const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;other) const</td></tr>
<tr class="memdesc:a529189f464aebc6b5ac5c717f70e14b8"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compares this set with another for inequality. <br /></td></tr>
<tr class="separator:a529189f464aebc6b5ac5c717f70e14b8"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a3209bb7c2a41deabaab059f6c671776f" id="r_a3209bb7c2a41deabaab059f6c671776f"><td class="memItemLeft" align="right" valign="top">uint64_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a3209bb7c2a41deabaab059f6c671776f">hash</a> (uint64_t seed=0) const</td></tr>
<tr class="memdesc:a3209bb7c2a41deabaab059f6c671776f"><td class="mdescLeft">&#160;</td><td class="mdescRight">Computes a hash for the entire set. <br /></td></tr>
<tr class="separator:a3209bb7c2a41deabaab059f6c671776f"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ad28907fc08de978461d68cc5b77a3a99" id="r_ad28907fc08de978461d68cc5b77a3a99"><td class="memItemLeft" align="right" valign="top">uint64_t&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad28907fc08de978461d68cc5b77a3a99">hash</a> (uint64_t seed) const</td></tr>
<tr class="memdesc:ad28907fc08de978461d68cc5b77a3a99"><td class="mdescLeft">&#160;</td><td class="mdescRight">Computes a hash for the entire set. <br /></td></tr>
<tr class="separator:ad28907fc08de978461d68cc5b77a3a99"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a133ad8cca6a75d31ef8efe67801aef1b" id="r_a133ad8cca6a75d31ef8efe67801aef1b"><td class="memItemLeft" align="right" valign="top">std::unordered_set&lt; fourdst::atomic::Species &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a133ad8cca6a75d31ef8efe67801aef1b">getReactionSetSpecies</a> () const</td></tr>
<tr class="separator:a133ad8cca6a75d31ef8efe67801aef1b"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr><td colspan="2"><div class="groupHeader">Iterators</div></td></tr>
<tr><td colspan="2"><div class="groupText"><p>Provides iterators to loop over the reactions in the set. </p>
</div></td></tr>
@@ -193,29 +187,22 @@ Public Member Functions</h2></td></tr>
Private Attributes</h2></td></tr>
<tr class="memitem:aff5ae284012009164d4b3033577709eb" id="r_aff5ae284012009164d4b3033577709eb"><td class="memItemLeft" align="right" valign="top">quill::Logger *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aff5ae284012009164d4b3033577709eb">m_logger</a> = fourdst::logging::LogManager::getInstance().getLogger(&quot;log&quot;)</td></tr>
<tr class="separator:aff5ae284012009164d4b3033577709eb"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aaa3c40cb22b8bd056cf62b047ae4937c" id="r_aaa3c40cb22b8bd056cf62b047ae4937c"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#aaa3c40cb22b8bd056cf62b047ae4937c">m_reactions</a></td></tr>
<tr class="separator:aaa3c40cb22b8bd056cf62b047ae4937c"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:abd6feda1b3f65a6177904755581f6efe" id="r_abd6feda1b3f65a6177904755581f6efe"><td class="memItemLeft" align="right" valign="top">std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#abd6feda1b3f65a6177904755581f6efe">m_reactions</a></td></tr>
<tr class="separator:abd6feda1b3f65a6177904755581f6efe"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:af92e3003b2a3606b48ab857cdedc3111" id="r_af92e3003b2a3606b48ab857cdedc3111"><td class="memItemLeft" align="right" valign="top">std::string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#af92e3003b2a3606b48ab857cdedc3111">m_id</a></td></tr>
<tr class="separator:af92e3003b2a3606b48ab857cdedc3111"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ad3e2715e9e4d6b4f1dc54b969a1322f4" id="r_ad3e2715e9e4d6b4f1dc54b969a1322f4"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; std::string, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#ad3e2715e9e4d6b4f1dc54b969a1322f4">m_reactionNameMap</a></td></tr>
<tr class="memdesc:ad3e2715e9e4d6b4f1dc54b969a1322f4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps reaction IDs to <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> objects for quick lookup. <br /></td></tr>
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<tr class="memitem:a62965c04447909462bb4f2112661ef44" id="r_a62965c04447909462bb4f2112661ef44"><td class="memItemLeft" align="right" valign="top">std::unordered_map&lt; std::string, size_t &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a62965c04447909462bb4f2112661ef44">m_reactionNameMap</a></td></tr>
<tr class="memdesc:a62965c04447909462bb4f2112661ef44"><td class="mdescLeft">&#160;</td><td class="mdescRight">Maps reaction IDs to <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> objects for quick lookup. <br /></td></tr>
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</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="friends" name="friends"></a>
Friends</h2></td></tr>
<tr class="memitem:a5a5e6ed364794f872c2c819536e24c20" id="r_a5a5e6ed364794f872c2c819536e24c20"><td class="memItemLeft" align="right" valign="top">std::ostream &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="#a5a5e6ed364794f872c2c819536e24c20">operator&lt;&lt;</a> (std::ostream &amp;os, const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;rs)</td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>A collection of <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> objects. </p>
<p>This class manages a set of individual <code><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a></code> objects, providing efficient lookup by ID and functionality to query the entire set.</p>
<p>Example: </p><div class="fragment"><div class="line"><a class="code hl_function" href="#afc40e3783576867229fad3115b3d39d3">ReactionSet</a> my_set({reaction1, reaction2});</div>
<div class="line">my_set.add_reaction(reaction3);</div>
<div class="line"><span class="keywordflow">if</span> (my_set.contains(<span class="stringliteral">&quot;h1(p,g)h2&quot;</span>)) {</div>
<div class="line"> <span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>&amp; r = my_set[<span class="stringliteral">&quot;h1(p,g)h2&quot;</span>];</div>
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<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a></div><div class="ttdoc">Represents a single nuclear reaction from a specific data source.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8h_source.html#l00071">reaction.h:71</a></div></div>
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_afc40e3783576867229fad3115b3d39d3"><div class="ttname"><a href="#afc40e3783576867229fad3115b3d39d3">gridfire::reaction::ReactionSet::ReactionSet</a></div><div class="ttdeci">ReactionSet(std::vector&lt; Reaction &gt; reactions)</div><div class="ttdoc">Constructs a ReactionSet from a vector of reactions.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00140">reaction.cpp:140</a></div></div>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00307">307</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
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<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
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<td class="paramtype">std::vector&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt;</td> <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
<td class="paramtype">std::vector&lt; std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; &gt; &amp;&amp;</td> <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
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<p>Constructs a <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html" title="A collection of Reaction objects.">ReactionSet</a> from a vector of reactions. </p>
<p>Constructs a <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> from a vector of reactions. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">reactions</td><td>The initial vector of <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> objects. </td></tr>
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<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00140">140</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<td class="paramtype">const std::vector&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> * &gt; &amp;</td> <td class="paramname"><span class="paramname"><em>reactions</em></span></td><td>)</td>
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<p>Copy constructor. </p>
<dl class="params"><dt>Parameters</dt><dd>
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<tr><td class="paramname">other</td><td>The <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html" title="A collection of Reaction objects.">ReactionSet</a> to copy. </td></tr>
<tr><td class="paramname">other</td><td>The <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> to copy. </td></tr>
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<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00154">154</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a64ca23fc5bdc41b868c3fbeb5aef6d98">&#9670;&#160;</a></span>~ReactionSet()</h2>
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<td class="memname">virtual gridfire::reaction::ReactionSet::~ReactionSet </td>
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<p>Virtual destructor. </p>
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<h2 class="groupheader">Member Function Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#acea41c2ffb010e46bc5cf56f5f244fac">&#9670;&#160;</a></span>add_reaction()</h2>
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<td class="paramtype"><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a></td> <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
<td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &amp;</td> <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
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<p>Adds a reaction to the set. </p>
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<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00175">175</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<td class="paramtype">std::unique_ptr&lt; <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> &gt; &amp;&amp;</td> <td class="paramname"><span class="paramname"><em>reaction</em></span></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00435">435</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00436">436</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<p>Removes all reactions from the set. </p>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00211">211</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<dl class="section return"><dt>Returns</dt><dd>True if the reaction is in the set, false otherwise. </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00202">202</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<dl class="section return"><dt>Returns</dt><dd>True if the reaction is in the set, false otherwise. </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00193">193</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<dl class="section return"><dt>Returns</dt><dd>True if the species is a product in any reaction. </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00234">234</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<dl class="section return"><dt>Returns</dt><dd>True if the species is a reactant in any reaction. </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00225">225</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<dl class="section return"><dt>Returns</dt><dd>True if the species is involved in any reaction. </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00216">216</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00437">437</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00438">438</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a133ad8cca6a75d31ef8efe67801aef1b">&#9670;&#160;</a></span>getReactionSetSpecies()</h2>
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<dl class="section return"><dt>Returns</dt><dd>A 64-bit hash value.</dd></dl>
<p>The algorithm computes the hash of each individual reaction, sorts the hashes, and then computes a final hash over the sorted list of hashes. This ensures the hash is order-independent. </p>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00270">270</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<p>Compares this set with another for inequality. </p>
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<dl class="section return"><dt>Returns</dt><dd>True if the sets are not equal. </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00266">266</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<p>Copy assignment operator. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">other</td><td>The <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html" title="A collection of Reaction objects.">ReactionSet</a> to assign from. </td></tr>
<tr><td class="paramname">other</td><td>The <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> to assign from. </td></tr>
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<dl class="section return"><dt>Returns</dt><dd>A reference to this <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html" title="A collection of Reaction objects.">ReactionSet</a>. </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00166">166</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
<dl class="section return"><dt>Returns</dt><dd>A reference to this <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a>. </dd></dl>
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@@ -759,14 +771,12 @@ Private Attributes</h2></td></tr>
<p>Compares this set with another for equality. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">other</td><td>The other <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html" title="A collection of Reaction objects.">ReactionSet</a> to compare with. </td></tr>
<tr><td class="paramname">other</td><td>The other <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> to compare with. </td></tr>
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<dl class="section return"><dt>Returns</dt><dd>True if the sets are equal (same size and hash). </dd></dl>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00259">259</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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</dd>
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<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00251">251</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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@@ -829,7 +837,7 @@ Private Attributes</h2></td></tr>
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<td class="mlabels-right">
<span class="mlabels"><span class="mlabel nodiscard">nodiscard</span><span class="mlabel virtual">virtual</span></span> </td>
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<p>Reimplemented in <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a00001bbc0f888b167da50ae9fc2a75af">gridfire::reaction::LogicalReactionSet</a>.</p>
<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00243">243</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<td class="memname">void gridfire::reaction::ReactionSet::remove_reaction </td>
@@ -871,11 +872,6 @@ Private Attributes</h2></td></tr>
<td></td>
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<span class="mlabels"><span class="mlabel virtual">virtual</span></span> </td>
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<p>Removes a reaction from the set. </p>
@@ -886,12 +882,10 @@ Private Attributes</h2></td></tr>
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<p class="definition">Definition at line <a class="el" href="reaction_8cpp_source.html#l00181">181</a> of file <a class="el" href="reaction_8cpp_source.html">reaction.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a6b07a81a3500e4e91d3bcd336b66e35d">&#9670;&#160;</a></span>size()</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#af14cf34d7367cb6a6be5191724c2d4cf">&#9670;&#160;</a></span>size()</h2>
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<td class="memname">virtual size_t gridfire::reaction::ReactionSet::size </td>
<td class="memname">size_t gridfire::reaction::ReactionSet::size </td>
<td>(</td>
<td class="paramname"><span class="paramname"><em></em></span></td><td>)</td>
<td> const</td>
@@ -908,7 +902,7 @@ Private Attributes</h2></td></tr>
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<p>Gets the number of reactions in the set. </p>
<dl class="section return"><dt>Returns</dt><dd>The size of the set. </dd></dl>
<p>Reimplemented in <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a3bcdf2f98c19e9b95e03ad62d6ff7da7">gridfire::reaction::LogicalReactionSet</a>.</p>
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<h2 class="groupheader">Friends And Related Symbol Documentation</h2>
<a id="a5a5e6ed364794f872c2c819536e24c20" name="a5a5e6ed364794f872c2c819536e24c20"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a5a5e6ed364794f872c2c819536e24c20">&#9670;&#160;</a></span>operator&lt;&lt;</h2>
<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00363">363</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<td class="memname">std::ostream &amp; operator&lt;&lt; </td>
<td>(</td>
<td class="paramtype">std::ostream &amp;</td> <td class="paramname"><span class="paramname"><em>os</em></span>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a> &amp;</td> <td class="paramname"><span class="paramname"><em>rs</em></span>&#160;)</td>
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<span class="mlabels"><span class="mlabel friend">friend</span></span> </td>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00443">443</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00441">441</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ad3e2715e9e4d6b4f1dc54b969a1322f4">&#9670;&#160;</a></span>m_reactionNameMap</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#a62965c04447909462bb4f2112661ef44">&#9670;&#160;</a></span>m_reactionNameMap</h2>
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<td class="memname">std::unordered_map&lt;std::string, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>&gt; gridfire::reaction::ReactionSet::m_reactionNameMap</td>
<td class="memname">std::unordered_map&lt;std::string, size_t&gt; gridfire::reaction::ReactionSet::m_reactionNameMap</td>
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@@ -993,12 +1009,10 @@ Private Attributes</h2></td></tr>
<p>Maps reaction IDs to <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" title="Represents a single nuclear reaction from a specific data source.">Reaction</a> objects for quick lookup. </p>
<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00444">444</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#aaa3c40cb22b8bd056cf62b047ae4937c">&#9670;&#160;</a></span>m_reactions</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#abd6feda1b3f65a6177904755581f6efe">&#9670;&#160;</a></span>m_reactions</h2>
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<td class="memname">std::vector&lt;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>&gt; gridfire::reaction::ReactionSet::m_reactions</td>
<td class="memname">std::vector&lt;std::unique_ptr&lt;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>&gt; &gt; gridfire::reaction::ReactionSet::m_reactions</td>
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<p class="definition">Definition at line <a class="el" href="reaction_8h_source.html#l00442">442</a> of file <a class="el" href="reaction_8h_source.html">reaction.h</a>.</p>
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<hr/>The documentation for this class was generated from the following files:<ul>
<li>src/network/include/gridfire/reaction/<a class="el" href="reaction_8h_source.html">reaction.h</a></li>
<li>src/network/lib/reaction/<a class="el" href="reaction_8cpp_source.html">reaction.cpp</a></li>
<li>src/include/gridfire/reaction/<a class="el" href="reaction_8h.html">reaction.h</a></li>
<li>src/lib/reaction/<a class="el" href="reaction_8cpp.html">reaction.cpp</a></li>
</ul>
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