From 9a3fd9ee3dbe08cab047aac16c260a9fc36bef76 Mon Sep 17 00:00:00 2001 From: Emily Boudreaux Date: Wed, 9 Sep 2026 12:39:53 -0400 Subject: [PATCH] docs(docs): rebuilt docs --- docs/html/_logo_8png.html | 2 +- docs/html/annotated.html | 38 +- docs/html/annotated_dup.js | 38 +- docs/html/classes.html | 39 +- docs/html/config_8h.html | 31 +- docs/html/config_8h.js | 5 +- docs/html/config_8h__dep__incl.map | 85 ++- docs/html/config_8h__dep__incl.md5 | 2 +- docs/html/config_8h__dep__incl.svg | 646 ++++++++++++++-- docs/html/config_8h__dep__incl_org.svg | 644 ++++++++++++++-- docs/html/curvilinear_8cpp.html | 9 +- docs/html/curvilinear_8cpp.js | 1 + docs/html/curvilinear_8cpp__incl.map | 55 +- docs/html/curvilinear_8cpp__incl.md5 | 2 +- docs/html/curvilinear_8cpp__incl.svg | 400 ++++++++-- docs/html/curvilinear_8cpp__incl_org.svg | 341 +++++++-- docs/html/curvilinear_8h.html | 12 +- docs/html/curvilinear_8h.js | 1 + docs/html/curvilinear_8h__dep__incl.map | 16 +- 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+ ...r_936721fd6a792737eaef7358bcd49428_dep.map | 4 +- ...r_936721fd6a792737eaef7358bcd49428_dep.md5 | 2 +- ...r_936721fd6a792737eaef7358bcd49428_dep.svg | 8 +- ...6721fd6a792737eaef7358bcd49428_dep_org.svg | 8 +- .../dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html | 8 +- .../dir_9d5018b9ddb63a582aa4c6b91bec2f8c.js | 4 +- ...r_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.map | 7 +- ...r_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.md5 | 2 +- ...r_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.svg | 42 +- ...5018b9ddb63a582aa4c6b91bec2f8c_dep_org.svg | 42 +- .../dir_9da86e8abab39b749c6020360d8e4403.html | 6 +- .../dir_9da86e8abab39b749c6020360d8e4403.js | 1 + ...r_9da86e8abab39b749c6020360d8e4403_dep.map | 13 +- ...r_9da86e8abab39b749c6020360d8e4403_dep.md5 | 2 +- ...r_9da86e8abab39b749c6020360d8e4403_dep.svg | 60 +- ...a86e8abab39b749c6020360d8e4403_dep_org.svg | 60 +- .../dir_b0856f6b0d80ccb263b2f415c91f9e17.html | 2 +- .../dir_c34d5e8363cf0aa3fabc4f3fad3412a4.html | 2 +- .../dir_c85d3e3c5052e9ad9ce18c6863244a25.html | 6 +- .../dir_c85d3e3c5052e9ad9ce18c6863244a25.js | 1 + ...r_c85d3e3c5052e9ad9ce18c6863244a25_dep.map | 25 +- ...r_c85d3e3c5052e9ad9ce18c6863244a25_dep.md5 | 2 +- ...r_c85d3e3c5052e9ad9ce18c6863244a25_dep.svg | 88 ++- ...5d3e3c5052e9ad9ce18c6863244a25_dep_org.svg | 88 ++- .../dir_dc36fd7496f87f6989d6d6a9445d600c.html | 2 +- docs/html/doxygen_crawl.html | 366 +++++++++- docs/html/files.html | 68 +- docs/html/functions.html | 237 +++++- docs/html/functions_vars.html | 216 +++++- docs/html/graph_legend.html | 2 +- docs/html/index.html | 181 +++-- docs/html/mainpage_8md.html | 2 +- docs/html/mapping_8cpp.html | 14 +- docs/html/mapping_8cpp.js | 1 + docs/html/mapping_8cpp__incl.map | 49 +- docs/html/mapping_8cpp__incl.md5 | 2 +- docs/html/mapping_8cpp__incl.svg | 367 ++++++++-- docs/html/mapping_8cpp__incl_org.svg | 308 ++++++-- docs/html/mapping_8h.html | 11 +- docs/html/mapping_8h.js | 1 + docs/html/mapping_8h__dep__incl.map | 14 +- docs/html/mapping_8h__dep__incl.md5 | 2 +- docs/html/mapping_8h__dep__incl.svg | 79 +- docs/html/mapping_8h__dep__incl_org.svg | 79 +- docs/html/mapping_8h__incl.map | 24 +- docs/html/mapping_8h__incl.md5 | 2 +- docs/html/mapping_8h__incl.svg | 136 +++- docs/html/mapping_8h__incl_org.svg | 136 +++- docs/html/menudata.js | 94 ++- docs/html/mesh_8cpp.html | 52 +- docs/html/mesh_8cpp.js | 12 +- docs/html/mesh_8cpp__incl.map | 89 ++- docs/html/mesh_8cpp__incl.md5 | 2 +- docs/html/mesh_8cpp__incl.svg | 690 ++++++++++++++++-- docs/html/mesh_8cpp__incl_org.svg | 631 ++++++++++++++-- docs/html/mesh_8h.html | 43 +- docs/html/mesh_8h.js | 12 +- docs/html/mesh_8h__dep__incl.map | 12 +- docs/html/mesh_8h__dep__incl.md5 | 2 +- docs/html/mesh_8h__dep__incl.svg | 79 +- docs/html/mesh_8h__dep__incl_org.svg | 79 +- docs/html/mesh_8h__incl.map | 37 +- docs/html/mesh_8h__incl.md5 | 2 +- docs/html/mesh_8h__incl.svg | 332 ++++++++- docs/html/mesh_8h__incl_org.svg | 273 ++++++- docs/html/mesh__utils_8cpp.html | 11 +- docs/html/mesh__utils_8cpp.js | 2 + docs/html/mesh__utils_8cpp__incl.map | 48 +- docs/html/mesh__utils_8cpp__incl.md5 | 2 +- docs/html/mesh__utils_8cpp__incl.svg | 409 ++++++++++- docs/html/mesh__utils_8cpp__incl_org.svg | 350 ++++++++- docs/html/mesh__utils_8h.html | 14 +- docs/html/mesh__utils_8h.js | 2 + docs/html/mesh__utils_8h__dep__incl.map | 14 +- docs/html/mesh__utils_8h__dep__incl.md5 | 2 +- docs/html/mesh__utils_8h__dep__incl.svg | 100 ++- docs/html/mesh__utils_8h__dep__incl_org.svg | 100 ++- docs/html/mesh__utils_8h__incl.map | 20 +- docs/html/mesh__utils_8h__incl.md5 | 2 +- docs/html/mesh__utils_8h__incl.svg | 148 +++- docs/html/mesh__utils_8h__incl_org.svg | 148 +++- docs/html/namespacemembers.html | 108 ++- docs/html/namespacemembers_enum.html | 4 +- docs/html/namespacemembers_func.html | 91 ++- docs/html/namespaces.html | 18 +- docs/html/namespacestroid.html | 401 +++++++++- docs/html/namespacestroid.js | 49 +- docs/html/namespacestroid_1_1_i_o.html | 301 +++++++- docs/html/namespacestroid_1_1config.html | 73 +- docs/html/namespacestroid_1_1config.js | 5 +- docs/html/namespacestroid_1_1topology.html | 153 +++- docs/html/namespacestroid_1_1utils.html | 61 +- docs/html/navtreedata.js | 36 +- docs/html/navtreeindex0.js | 343 ++++++--- docs/html/search/all_0.js | 15 +- docs/html/search/all_1.js | 18 +- docs/html/search/all_10.js | 32 +- docs/html/search/all_2.js | 24 +- docs/html/search/all_3.js | 30 +- docs/html/search/all_4.js | 14 +- docs/html/search/all_5.js | 15 +- docs/html/search/all_6.js | 11 +- docs/html/search/all_7.js | 7 +- docs/html/search/all_8.js | 20 +- docs/html/search/all_9.js | 7 +- docs/html/search/all_a.js | 6 +- docs/html/search/all_b.js | 5 +- docs/html/search/all_c.js | 45 +- docs/html/search/all_d.js | 17 +- docs/html/search/all_e.js | 18 +- docs/html/search/all_f.js | 9 +- docs/html/search/classes_0.js | 2 +- docs/html/search/enums_0.js | 3 +- docs/html/search/enumvalues_0.js | 2 +- docs/html/search/enumvalues_1.js | 4 +- docs/html/search/enumvalues_2.js | 4 +- docs/html/search/files_0.js | 4 +- docs/html/search/files_1.js | 3 +- docs/html/search/files_2.js | 10 +- docs/html/search/files_3.js | 3 +- docs/html/search/functions_0.js | 4 +- docs/html/search/functions_1.js | 4 +- docs/html/search/functions_2.js | 4 +- docs/html/search/functions_3.js | 7 +- docs/html/search/functions_4.js | 3 +- docs/html/search/functions_5.js | 4 +- docs/html/search/functions_6.js | 2 +- docs/html/search/functions_7.js | 3 +- docs/html/search/namespaces_0.js | 10 +- docs/html/search/pages_0.js | 2 +- docs/html/search/searchdata.js | 14 +- docs/html/search/variables_0.js | 11 +- docs/html/search/variables_1.js | 5 +- docs/html/search/variables_2.js | 4 +- docs/html/search/variables_3.js | 13 +- docs/html/search/variables_4.js | 5 +- docs/html/search/variables_5.js | 11 +- docs/html/search/variables_6.js | 2 +- docs/html/search/variables_7.js | 4 +- ...oid_1_1config_1_1_mesh_config-members.html | 35 +- ...tructstroid_1_1config_1_1_mesh_config.html | 290 +++++--- .../structstroid_1_1config_1_1_mesh_config.js | 33 +- docs/html/topology_8cpp.html | 12 +- docs/html/topology_8cpp__incl.map | 34 +- docs/html/topology_8cpp__incl.md5 | 2 +- docs/html/topology_8cpp__incl.svg | 275 ++++++- docs/html/topology_8cpp__incl_org.svg | 216 +++++- docs/html/topology_8h.html | 13 +- docs/html/topology_8h__incl.map | 28 +- docs/html/topology_8h__incl.md5 | 2 +- docs/html/topology_8h__incl.svg | 152 +++- docs/html/topology_8h__incl_org.svg | 152 +++- docs/static/mainpage.md | 191 ++++- 210 files changed, 12046 insertions(+), 2044 deletions(-) diff --git a/docs/html/_logo_8png.html b/docs/html/_logo_8png.html index 87e7fd1..ddde62e 100644 --- a/docs/html/_logo_8png.html +++ b/docs/html/_logo_8png.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
diff --git a/docs/html/annotated.html b/docs/html/annotated.html index af39902..f7f6f23 100644 --- a/docs/html/annotated.html +++ b/docs/html/annotated.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -106,9 +106,39 @@ $(function(){initNavTree('annotated.html',''); initResizable(true); });
Here are the classes, structs, unions and interfaces with brief descriptions:
[detail level 123]
- - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
 ▼Nstroid
 ▼Nconfig
 CMeshConfigConfiguration parameters for stroid mesh generation
 ▼NstdSTL namespace
 Cformatter< stroid::stats::MeshStats, char >
 ▼NstroidPublic API surface for the stroid mesh generation library
 ▼NconfigConfiguration types and defaults for mesh generation
 CMeshConfigConfiguration parameters for stroid mesh generation
 COptimizationMethods
 ▼Nexceptions
 CStroidContinuityError
 CStroidError
 CStroidMeshError
 CStroidMissingReferenceMesh
 ▼Nstats
 CAxisStats
 CBoundingBox
 CBoundingBoxStats
 CBowingStats
 CCentroidStats
 CConfigMeta
 CConformityStats
 CElementCounts
 CEllipticityStats
 CJacobianStats
 CMeshSizeStats
 CMeshStats
 COuterBoundsStats
 CRadiusStats
 CRefinementStats
 CRegionRefinementStats
 CVolumeAreaStats
 ▼NtopologyTopology construction and curvilinear mapping utilities
 CTMOPProgressBar
 CScalarMeshField
 CStroidMesh
diff --git a/docs/html/annotated_dup.js b/docs/html/annotated_dup.js index ed02b46..419e6eb 100644 --- a/docs/html/annotated_dup.js +++ b/docs/html/annotated_dup.js @@ -1,8 +1,42 @@ var annotated_dup = [ + [ "std", null, [ + [ "formatter< stroid::stats::MeshStats, char >", "structstd_1_1formatter_3_01stroid_1_1stats_1_1_mesh_stats_00_01char_01_4.html", "structstd_1_1formatter_3_01stroid_1_1stats_1_1_mesh_stats_00_01char_01_4" ] + ] ], [ "stroid", "namespacestroid.html", [ [ "config", "namespacestroid_1_1config.html", [ - [ "MeshConfig", "structstroid_1_1config_1_1_mesh_config.html", "structstroid_1_1config_1_1_mesh_config" ] - ] ] + [ "MeshConfig", "structstroid_1_1config_1_1_mesh_config.html", "structstroid_1_1config_1_1_mesh_config" ], + [ "OptimizationMethods", "structstroid_1_1config_1_1_optimization_methods.html", "structstroid_1_1config_1_1_optimization_methods" ] + ] ], + [ "exceptions", "namespacestroid_1_1exceptions.html", [ + [ "StroidContinuityError", "classstroid_1_1exceptions_1_1_stroid_continuity_error.html", "classstroid_1_1exceptions_1_1_stroid_continuity_error" ], + [ "StroidError", "classstroid_1_1exceptions_1_1_stroid_error.html", "classstroid_1_1exceptions_1_1_stroid_error" ], + [ "StroidMeshError", "classstroid_1_1exceptions_1_1_stroid_mesh_error.html", "classstroid_1_1exceptions_1_1_stroid_mesh_error" ], + [ "StroidMissingReferenceMesh", "classstroid_1_1exceptions_1_1_stroid_missing_reference_mesh.html", null ] + ] ], + [ "stats", "namespacestroid_1_1stats.html", [ + [ "AxisStats", "structstroid_1_1stats_1_1_axis_stats.html", "structstroid_1_1stats_1_1_axis_stats" ], + [ "BoundingBox", "structstroid_1_1stats_1_1_bounding_box.html", "structstroid_1_1stats_1_1_bounding_box" ], + [ "BoundingBoxStats", "structstroid_1_1stats_1_1_bounding_box_stats.html", "structstroid_1_1stats_1_1_bounding_box_stats" ], + [ "BowingStats", "structstroid_1_1stats_1_1_bowing_stats.html", "structstroid_1_1stats_1_1_bowing_stats" ], + [ "CentroidStats", "structstroid_1_1stats_1_1_centroid_stats.html", "structstroid_1_1stats_1_1_centroid_stats" ], + [ "ConfigMeta", "structstroid_1_1stats_1_1_config_meta.html", "structstroid_1_1stats_1_1_config_meta" ], + [ "ConformityStats", "structstroid_1_1stats_1_1_conformity_stats.html", "structstroid_1_1stats_1_1_conformity_stats" ], + [ "ElementCounts", "structstroid_1_1stats_1_1_element_counts.html", "structstroid_1_1stats_1_1_element_counts" ], + [ "EllipticityStats", "structstroid_1_1stats_1_1_ellipticity_stats.html", "structstroid_1_1stats_1_1_ellipticity_stats" ], + [ "JacobianStats", "structstroid_1_1stats_1_1_jacobian_stats.html", "structstroid_1_1stats_1_1_jacobian_stats" ], + [ "MeshSizeStats", "structstroid_1_1stats_1_1_mesh_size_stats.html", "structstroid_1_1stats_1_1_mesh_size_stats" ], + [ "MeshStats", "structstroid_1_1stats_1_1_mesh_stats.html", "structstroid_1_1stats_1_1_mesh_stats" ], + [ "OuterBoundsStats", "structstroid_1_1stats_1_1_outer_bounds_stats.html", "structstroid_1_1stats_1_1_outer_bounds_stats" ], + [ "RadiusStats", "structstroid_1_1stats_1_1_radius_stats.html", "structstroid_1_1stats_1_1_radius_stats" ], + [ "RefinementStats", "structstroid_1_1stats_1_1_refinement_stats.html", "structstroid_1_1stats_1_1_refinement_stats" ], + [ "RegionRefinementStats", "structstroid_1_1stats_1_1_region_refinement_stats.html", "structstroid_1_1stats_1_1_region_refinement_stats" ], + [ "VolumeAreaStats", "structstroid_1_1stats_1_1_volume_area_stats.html", "structstroid_1_1stats_1_1_volume_area_stats" ] + ] ], + [ "topology", "namespacestroid_1_1topology.html", [ + [ "TMOPProgressBar", "classstroid_1_1topology_1_1_t_m_o_p_progress_bar.html", "classstroid_1_1topology_1_1_t_m_o_p_progress_bar" ] + ] ], + [ "ScalarMeshField", "structstroid_1_1_scalar_mesh_field.html", "structstroid_1_1_scalar_mesh_field" ], + [ "StroidMesh", "structstroid_1_1_stroid_mesh.html", "structstroid_1_1_stroid_mesh" ] ] ] ]; \ No newline at end of file diff --git a/docs/html/classes.html b/docs/html/classes.html index 340b50a..2e2cc52 100644 --- a/docs/html/classes.html +++ b/docs/html/classes.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -104,11 +104,44 @@ $(function(){initNavTree('classes.html',''); initResizable(true); });
Class Index
-
M
+
A | B | C | E | F | J | M | O | R | S | T | V
+
A
+
AxisStats (stroid::stats)
+
+
B
+
BoundingBox (stroid::stats)
BoundingBoxStats (stroid::stats)
BowingStats (stroid::stats)
+
+
C
+
CentroidStats (stroid::stats)
ConfigMeta (stroid::stats)
ConformityStats (stroid::stats)
+
+
E
+
ElementCounts (stroid::stats)
EllipticityStats (stroid::stats)
+
+
F
+
formatter< stroid::stats::MeshStats, char > (std)
+
+
J
+
JacobianStats (stroid::stats)
+
M
-
MeshConfig (stroid::config)
+
MeshConfig (stroid::config)
MeshSizeStats (stroid::stats)
MeshStats (stroid::stats)
+
+
O
+
OptimizationMethods (stroid::config)
OuterBoundsStats (stroid::stats)
+
+
R
+
RadiusStats (stroid::stats)
RefinementStats (stroid::stats)
RegionRefinementStats (stroid::stats)
+
+
S
+
ScalarMeshField (stroid)
StroidContinuityError (stroid::exceptions)
StroidError (stroid::exceptions)
StroidMesh (stroid)
StroidMeshError (stroid::exceptions)
StroidMissingReferenceMesh (stroid::exceptions)
+
+
T
+
TMOPProgressBar (stroid::topology)
+
+
V
+
VolumeAreaStats (stroid::stats)
diff --git a/docs/html/config_8h.html b/docs/html/config_8h.html index 25ebfcc..45fe864 100644 --- a/docs/html/config_8h.html +++ b/docs/html/config_8h.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -103,18 +103,31 @@ $(function(){initNavTree('config_8h.html',''); initResizable(true); });
Classes | -Namespaces
+Namespaces | +Functions
config.h File Reference
-
+
#include <cstdint>
+#include <optional>
+#include <string>
+#include <format>
+#include <sstream>
+
+Include dependency graph for config.h:
+
+
+
+
This graph shows which files directly or indirectly include this file:
-
+
+ + @@ -122,9 +135,19 @@ Classes + + +

Classes

struct  stroid::config::OptimizationMethods
 
struct  stroid::config::MeshConfig
 Configuration parameters for stroid mesh generation. More...
 

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::config
 Configuration types and defaults for mesh generation.
 
+ + + + + +

+Functions

MeshConfig stroid::config::ResolveDefaults (const MeshConfig &mesh_config)
 Fill omitted configuration values.
 
std::string stroid::config::to_string (const MeshConfig &mesh_config)
 
diff --git a/docs/html/config_8h.js b/docs/html/config_8h.js index e42db01..399b398 100644 --- a/docs/html/config_8h.js +++ b/docs/html/config_8h.js @@ -1,4 +1,7 @@ var config_8h = [ - [ "stroid::config::MeshConfig", "structstroid_1_1config_1_1_mesh_config.html", "structstroid_1_1config_1_1_mesh_config" ] + [ "stroid::config::OptimizationMethods", "structstroid_1_1config_1_1_optimization_methods.html", "structstroid_1_1config_1_1_optimization_methods" ], + [ "stroid::config::MeshConfig", "structstroid_1_1config_1_1_mesh_config.html", "structstroid_1_1config_1_1_mesh_config" ], + [ "stroid::config::ResolveDefaults", "namespacestroid_1_1config.html#a84d2f4618367487820ac818c3c47a39a", null ], + [ "stroid::config::to_string", "namespacestroid_1_1config.html#a4f2409cb05fd572794c115d850502d61", null ] ]; \ No newline at end of file diff --git a/docs/html/config_8h__dep__incl.map b/docs/html/config_8h__dep__incl.map index 1c938c7..c184b8c 100644 --- a/docs/html/config_8h__dep__incl.map +++ b/docs/html/config_8h__dep__incl.map @@ -1,18 +1,71 @@ - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/config_8h__dep__incl.md5 b/docs/html/config_8h__dep__incl.md5 index 3d79d0f..6d3c273 100644 --- a/docs/html/config_8h__dep__incl.md5 +++ b/docs/html/config_8h__dep__incl.md5 @@ -1 +1 @@ -1981f677764f42c4b4f0cb2161e8450f \ No newline at end of file +2eeac66c032be21b1039e05b200bea4f \ No newline at end of file diff --git a/docs/html/config_8h__dep__incl.svg b/docs/html/config_8h__dep__incl.svg index 90b65b4..ddf7e8d 100644 --- a/docs/html/config_8h__dep__incl.svg +++ b/docs/html/config_8h__dep__incl.svg @@ -1,10 +1,10 @@ - - + @@ -47,9 +47,9 @@ @@ -59,19 +59,19 @@ var sectionId = 'dynsection-0'; Node1 - -src/include/stroid -/config/config.h + +src/include/stroid +/config/config.h Node2 - - -src/include/stroid -/topology/curvilinear.h + + +src/include/stroid +/stroid.h @@ -79,18 +79,18 @@ var sectionId = 'dynsection-0'; Node1->Node2 - - + + Node4 - - -src/include/stroid -/topology/mapping.h + + +src/include/stroid +/topology/curvilinear.h @@ -98,72 +98,185 @@ var sectionId = 'dynsection-0'; Node1->Node4 - - + + - - -Node6 - - -src/include/stroid -/topology/topology.h + + +Node5 + + +src/lib/IO/mesh.cpp - - -Node1->Node6 - - - + + +Node1->Node5 + + + - - -Node7 - - -src/lib/IO/mesh.cpp + + +Node9 + + +src/include/stroid +/topology/mapping.h - - -Node1->Node7 - - - + + +Node1->Node9 + + + - - -Node8 - - -src/lib/topology/topology.cpp + + +Node11 + + +src/include/stroid +/topology/optimize.h - - -Node1->Node8 - - - + + +Node1->Node11 + + + + + + + + +Node13 + + +src/include/stroid +/topology/topology.h + + + + + +Node1->Node13 + + + + + + + + +Node14 + + +src/include/stroid +/utils/mesh_stats.h + + + + + +Node1->Node14 + + + + + + + + +Node17 + + +src/include/stroid +/utils/mesh_utils.h + + + + + +Node1->Node17 + + + + + + + + +Node18 + + +src/include/stroid +/utils/types.h + + + + + +Node1->Node18 + + + + + + + + +Node23 + + +src/lib/topology/topology.cpp + + + + + +Node1->Node23 + + + + + + + + +Node24 + + +src/python/config/bindings.cpp + + + + + +Node1->Node24 + + + Node3 - - -src/lib/topology/curvilinear.cpp + + +src/python/bindings.cpp @@ -171,26 +284,17 @@ var sectionId = 'dynsection-0'; Node2->Node3 - - + + - - -Node4->Node3 - - - - - - - - -Node5 - - -src/lib/topology/mapping.cpp + + +Node4->Node2 + + + @@ -198,8 +302,392 @@ var sectionId = 'dynsection-0'; Node4->Node5 - - + + + + + + + +Node6 + + +src/lib/refinement +/uniform.cpp + + + + + +Node4->Node6 + + + + + + + + +Node7 + + +src/lib/topology/curvilinear.cpp + + + + + +Node4->Node7 + + + + + + + + +Node8 + + +src/lib/utils/mesh +_utils.cpp + + + + + +Node4->Node8 + + + + + + + + +Node9->Node2 + + + + + + + + +Node9->Node7 + + + + + + + + +Node10 + + +src/lib/topology/mapping.cpp + + + + + +Node9->Node10 + + + + + + + + +Node11->Node2 + + + + + + + + +Node11->Node6 + + + + + + + + +Node12 + + +src/lib/topology/optimize.cpp + + + + + +Node11->Node12 + + + + + + + + +Node13->Node2 + + + + + + + + +Node13->Node6 + + + + + + + + +Node14->Node2 + + + + + + + + +Node15 + + +src/lib/utils/mesh +_stats.cpp + + + + + +Node14->Node15 + + + + + + + + +Node16 + + +src/python/utils/bindings.cpp + + + + + +Node14->Node16 + + + + + + + + +Node17->Node2 + + + + + + + + +Node17->Node6 + + + + + + + + +Node17->Node8 + + + + + + + + +Node17->Node16 + + + + + + + + +Node18->Node2 + + + + + + + + +Node18->Node4 + + + + + + + + +Node18->Node6 + + + + + + + + +Node18->Node14 + + + + + + + + +Node18->Node16 + + + + + + + + +Node19 + + +src/include/stroid +/IO/mesh.h + + + + + +Node18->Node19 + + + + + + + + +Node21 + + +src/include/stroid +/refinement/uniform.h + + + + + +Node18->Node21 + + + + + + + + +Node19->Node2 + + + + + + + + +Node19->Node5 + + + + + + + + +Node20 + + +src/python/IO/bindings.cpp + + + + + +Node19->Node20 + + + + + + + + +Node21->Node2 + + + + + + + + +Node21->Node6 + + + + + + + + +Node22 + + +src/python/refinement +/bindings.cpp + + + + + +Node21->Node22 + + + diff --git a/docs/html/config_8h__dep__incl_org.svg b/docs/html/config_8h__dep__incl_org.svg index e368527..20f35a2 100644 --- a/docs/html/config_8h__dep__incl_org.svg +++ b/docs/html/config_8h__dep__incl_org.svg @@ -1,30 +1,30 @@ - - - + + src/include/stroid/config/config.h Node1 - -src/include/stroid -/config/config.h + +src/include/stroid +/config/config.h Node2 - - -src/include/stroid -/topology/curvilinear.h + + +src/include/stroid +/stroid.h @@ -32,18 +32,18 @@ Node1->Node2 - - + + Node4 - - -src/include/stroid -/topology/mapping.h + + +src/include/stroid +/topology/curvilinear.h @@ -51,72 +51,185 @@ Node1->Node4 - - + + - - -Node6 - - -src/include/stroid -/topology/topology.h + + +Node5 + + +src/lib/IO/mesh.cpp - - -Node1->Node6 - - - + + +Node1->Node5 + + + - - -Node7 - - -src/lib/IO/mesh.cpp + + +Node9 + + +src/include/stroid +/topology/mapping.h - - -Node1->Node7 - - - + + +Node1->Node9 + + + - - -Node8 - - -src/lib/topology/topology.cpp + + +Node11 + + +src/include/stroid +/topology/optimize.h - - -Node1->Node8 - - - + + +Node1->Node11 + + + + + + + + +Node13 + + +src/include/stroid +/topology/topology.h + + + + + +Node1->Node13 + + + + + + + + +Node14 + + +src/include/stroid +/utils/mesh_stats.h + + + + + +Node1->Node14 + + + + + + + + +Node17 + + +src/include/stroid +/utils/mesh_utils.h + + + + + +Node1->Node17 + + + + + + + + +Node18 + + +src/include/stroid +/utils/types.h + + + + + +Node1->Node18 + + + + + + + + +Node23 + + +src/lib/topology/topology.cpp + + + + + +Node1->Node23 + + + + + + + + +Node24 + + +src/python/config/bindings.cpp + + + + + +Node1->Node24 + + + Node3 - - -src/lib/topology/curvilinear.cpp + + +src/python/bindings.cpp @@ -124,26 +237,17 @@ Node2->Node3 - - + + - - -Node4->Node3 - - - - - - - - -Node5 - - -src/lib/topology/mapping.cpp + + +Node4->Node2 + + + @@ -151,8 +255,392 @@ Node4->Node5 - - + + + + + + + +Node6 + + +src/lib/refinement +/uniform.cpp + + + + + +Node4->Node6 + + + + + + + + +Node7 + + +src/lib/topology/curvilinear.cpp + + + + + +Node4->Node7 + + + + + + + + +Node8 + + +src/lib/utils/mesh +_utils.cpp + + + + + +Node4->Node8 + + + + + + + + +Node9->Node2 + + + + + + + + +Node9->Node7 + + + + + + + + +Node10 + + +src/lib/topology/mapping.cpp + + + + + +Node9->Node10 + + + + + + + + +Node11->Node2 + + + + + + + + +Node11->Node6 + + + + + + + + +Node12 + + +src/lib/topology/optimize.cpp + + + + + +Node11->Node12 + + + + + + + + +Node13->Node2 + + + + + + + + +Node13->Node6 + + + + + + + + +Node14->Node2 + + + + + + + + +Node15 + + +src/lib/utils/mesh +_stats.cpp + + + + + +Node14->Node15 + + + + + + + + +Node16 + + +src/python/utils/bindings.cpp + + + + + +Node14->Node16 + + + + + + + + +Node17->Node2 + + + + + + + + +Node17->Node6 + + + + + + + + +Node17->Node8 + + + + + + + + +Node17->Node16 + + + + + + + + +Node18->Node2 + + + + + + + + +Node18->Node4 + + + + + + + + +Node18->Node6 + + + + + + + + +Node18->Node14 + + + + + + + + +Node18->Node16 + + + + + + + + +Node19 + + +src/include/stroid +/IO/mesh.h + + + + + +Node18->Node19 + + + + + + + + +Node21 + + +src/include/stroid +/refinement/uniform.h + + + + + +Node18->Node21 + + + + + + + + +Node19->Node2 + + + + + + + + +Node19->Node5 + + + + + + + + +Node20 + + +src/python/IO/bindings.cpp + + + + + +Node19->Node20 + + + + + + + + +Node21->Node2 + + + + + + + + +Node21->Node6 + + + + + + + + +Node22 + + +src/python/refinement +/bindings.cpp + + + + + +Node21->Node22 + + + diff --git a/docs/html/curvilinear_8cpp.html b/docs/html/curvilinear_8cpp.html index 4a7183d..29f6a52 100644 --- a/docs/html/curvilinear_8cpp.html +++ b/docs/html/curvilinear_8cpp.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -113,14 +113,16 @@ $(function(){initNavTree('curvilinear_8cpp.html',''); initResizable(true); });
Include dependency graph for curvilinear.cpp:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::topology
 Topology construction and curvilinear mapping utilities.
 
+ + +

@@ -131,6 +133,9 @@ Functions

void stroid::topology::ProjectMesh (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
 Project high-order mesh nodes using the configured curvilinear mapping.
 
std::unique_ptr< ScalarMeshField > stroid::topology::BuildExteriorCoordinate (mfem::Mesh &mesh, mfem::Mesh &reference_mesh, const fourdst::config::Config< config::MeshConfig > &config)
 Build a scalar grid function representing the compactification coordinate for a mesh. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.
 
diff --git a/docs/html/curvilinear_8cpp.js b/docs/html/curvilinear_8cpp.js index 1379c5b..0841d46 100644 --- a/docs/html/curvilinear_8cpp.js +++ b/docs/html/curvilinear_8cpp.js @@ -1,5 +1,6 @@ var curvilinear_8cpp = [ + [ "stroid::topology::BuildExteriorCoordinate", "namespacestroid_1_1topology.html#a5ab92f7fb487c4639042539bf7b86606", null ], [ "stroid::topology::ProjectMesh", "namespacestroid_1_1topology.html#a836ed13e5bac63e7952c3ce4e5532e78", null ], [ "stroid::topology::PromoteToHighOrder", "namespacestroid_1_1topology.html#a5907aa2e639cda703d48d177abc37caf", null ] ]; \ No newline at end of file diff --git a/docs/html/curvilinear_8cpp__incl.map b/docs/html/curvilinear_8cpp__incl.map index 7462081..74a1e36 100644 --- a/docs/html/curvilinear_8cpp__incl.map +++ b/docs/html/curvilinear_8cpp__incl.map @@ -1,18 +1,41 @@ - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/curvilinear_8cpp__incl.md5 b/docs/html/curvilinear_8cpp__incl.md5 index 63565a5..857b754 100644 --- a/docs/html/curvilinear_8cpp__incl.md5 +++ b/docs/html/curvilinear_8cpp__incl.md5 @@ -1 +1 @@ -31c392d827608579a7e0e3bf6524e7f9 \ No newline at end of file +d45956378a9ea1ae6c7d8c6291ea6c42 \ No newline at end of file diff --git a/docs/html/curvilinear_8cpp__incl.svg b/docs/html/curvilinear_8cpp__incl.svg index 5ec19ad..d2c2b91 100644 --- a/docs/html/curvilinear_8cpp__incl.svg +++ b/docs/html/curvilinear_8cpp__incl.svg @@ -4,10 +4,9 @@ - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + src/lib/topology/curvilinear.cpp Node1 - -src/lib/topology/curvilinear.cpp + +src/lib/topology/curvilinear.cpp @@ -32,8 +68,8 @@ Node2 - -stroid/topology/curvilinear.h + +stroid/topology/curvilinear.h @@ -41,44 +77,44 @@ Node1->Node2 - - + + - - -Node6 - - -stroid/topology/mapping.h + + +Node16 + + +stroid/topology/mapping.h - - -Node1->Node6 - - - + + +Node1->Node16 + + + - - -Node7 - - -iostream + + +Node17 + + +iostream - - -Node1->Node7 - - - + + +Node1->Node17 + + + @@ -86,8 +122,8 @@ Node3 - -mfem.hpp + +mfem.hpp @@ -95,8 +131,8 @@ Node2->Node3 - - + + @@ -104,8 +140,8 @@ Node4 - -stroid/config/config.h + +stroid/config/config.h @@ -113,8 +149,44 @@ Node2->Node4 - - + + + + + + + +Node10 + + +fourdst/config/config.h + + + + + +Node2->Node10 + + + + + + + + +Node11 + + +stroid/utils/types.h + + + + + +Node2->Node11 + + + @@ -122,49 +194,241 @@ Node5 - -fourdst/config/config.h + +cstdint - - -Node2->Node5 - - - + + +Node4->Node5 + + + - - -Node6->Node3 - - - + + +Node6 + + +optional - - -Node6->Node4 - - - + + +Node4->Node6 + + + - - -Node6->Node5 - - - + + +Node7 + + +string + + + + + +Node4->Node7 + + + + + + + + +Node8 + + +format + + + + + +Node4->Node8 + + + + + + + + +Node9 + + +sstream + + + + + +Node4->Node9 + + + + + + + + +Node11->Node3 + + + + + + + + +Node11->Node4 + + + + + + + + +Node11->Node7 + + + + + + + + +Node12 + + +memory + + + + + +Node11->Node12 + + + + + + + + +Node13 + + +expected + + + + + +Node11->Node13 + + + + + + + + +Node14 + + +unordered_map + + + + + +Node11->Node14 + + + + + + + + +Node15 + + +variant + + + + + +Node11->Node15 + + + + + + + + +Node16->Node3 + + + + + + + + +Node16->Node4 + + + + + + + + +Node16->Node10 + + + + + + + + + + + + + + + + + + + + + Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -110,22 +110,25 @@ $(function(){initNavTree('curvilinear_8h.html',''); initResizable(true); });
#include "mfem.hpp"
#include "stroid/config/config.h"
#include "fourdst/config/config.h"
+#include "stroid/utils/types.h"
Include dependency graph for curvilinear.h:
-
+
This graph shows which files directly or indirectly include this file:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::topology
 Topology construction and curvilinear mapping utilities.
 
+ + +

@@ -136,6 +139,9 @@ Functions

void stroid::topology::ProjectMesh (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
 Project high-order mesh nodes using the configured curvilinear mapping.
 
std::unique_ptr< ScalarMeshField > stroid::topology::BuildExteriorCoordinate (mfem::Mesh &mesh, mfem::Mesh &reference_mesh, const fourdst::config::Config< config::MeshConfig > &config)
 Build a scalar grid function representing the compactification coordinate for a mesh. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.
 
diff --git a/docs/html/curvilinear_8h.js b/docs/html/curvilinear_8h.js index afbb0ab..585bd4d 100644 --- a/docs/html/curvilinear_8h.js +++ b/docs/html/curvilinear_8h.js @@ -1,5 +1,6 @@ var curvilinear_8h = [ + [ "stroid::topology::BuildExteriorCoordinate", "namespacestroid_1_1topology.html#a5ab92f7fb487c4639042539bf7b86606", null ], [ "stroid::topology::ProjectMesh", "namespacestroid_1_1topology.html#a836ed13e5bac63e7952c3ce4e5532e78", null ], [ "stroid::topology::PromoteToHighOrder", "namespacestroid_1_1topology.html#a5907aa2e639cda703d48d177abc37caf", null ] ]; \ No newline at end of file diff --git a/docs/html/curvilinear_8h__dep__incl.map b/docs/html/curvilinear_8h__dep__incl.map index 46308f6..0baba87 100644 --- a/docs/html/curvilinear_8h__dep__incl.map +++ b/docs/html/curvilinear_8h__dep__incl.map @@ -1,5 +1,15 @@ - - - + + + + + + + + + + + + + diff --git a/docs/html/curvilinear_8h__dep__incl.md5 b/docs/html/curvilinear_8h__dep__incl.md5 index 5f4b3af..9578c80 100644 --- a/docs/html/curvilinear_8h__dep__incl.md5 +++ b/docs/html/curvilinear_8h__dep__incl.md5 @@ -1 +1 @@ -1ef7d734bf2c7c23d22f2dc767d814d9 \ No newline at end of file +8ebbe784dcbe0800100b357b2af6d277 \ No newline at end of file diff --git a/docs/html/curvilinear_8h__dep__incl.svg b/docs/html/curvilinear_8h__dep__incl.svg index 6d3283d..b0495ea 100644 --- a/docs/html/curvilinear_8h__dep__incl.svg +++ b/docs/html/curvilinear_8h__dep__incl.svg @@ -1,13 +1,12 @@ - - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + src/include/stroid/topology/curvilinear.h Node1 - -src/include/stroid -/topology/curvilinear.h + +src/include/stroid +/topology/curvilinear.h Node2 - - -src/lib/topology/curvilinear.cpp + + +src/include/stroid +/stroid.h @@ -42,13 +79,126 @@ Node1->Node2 - - + + + + + + + +Node4 + + +src/lib/IO/mesh.cpp + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +src/lib/refinement +/uniform.cpp + + + + + +Node1->Node5 + + + + + + + + +Node6 + + +src/lib/topology/curvilinear.cpp + + + + + +Node1->Node6 + + + + + + + + +Node7 + + +src/lib/utils/mesh +_utils.cpp + + + + + +Node1->Node7 + + + + + + + + +Node3 + + +src/python/bindings.cpp + + + + + +Node2->Node3 + + + + + + + + + + + + + + + + + + + + + Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -107,7 +107,7 @@ $(function(){initNavTree('dir_31a6c70da1404d38d1b51e38b19548a1.html',''); initRe
Directory dependency graph for IO:
-
+
@@ -107,19 +107,28 @@ $(function(){initNavTree('dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.html',''); initRe
Directory dependency graph for stroid:
-
+

diff --git a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.map b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.map index d7f574b..70f15e1 100644 --- a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.map +++ b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.map @@ -1,4 +1,7 @@ - - + + + + + diff --git a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.md5 b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.md5 index 87a2367..7c1bef7 100644 --- a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.md5 +++ b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.md5 @@ -1 +1 @@ -ca552089631a787b46f4183859a8aad9 \ No newline at end of file +cca422376e856b7996b22c55ca903c9e \ No newline at end of file diff --git a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.svg b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.svg index fe13325..a366b72 100644 --- a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.svg +++ b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep.svg @@ -1,11 +1,11 @@ - - + @@ -17,22 +17,44 @@ ]]> - + src/include/stroid/IO clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - -stroid + +stroid + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + +utils - + dir_31a6c70da1404d38d1b51e38b19548a1 - - -IO + + +IO + + + + + +dir_31a6c70da1404d38d1b51e38b19548a1->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 diff --git a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep_org.svg b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep_org.svg index c954b32..850ce45 100644 --- a/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep_org.svg +++ b/docs/html/dir_31a6c70da1404d38d1b51e38b19548a1_dep_org.svg @@ -1,27 +1,49 @@ - - - + + src/include/stroid/IO clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - -stroid + +stroid + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + +utils - + dir_31a6c70da1404d38d1b51e38b19548a1 - - -IO + + +IO + + + + + +dir_31a6c70da1404d38d1b51e38b19548a1->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 diff --git a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.html b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.html index e5894ab..5331ccb 100644 --- a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.html +++ b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.html @@ -31,7 +31,7 @@
Logo

 -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
+ + + + +

Directories

 config
 
 exceptions
 
 IO
 
 refinement
 
 topology
 
 utils
 
+ + +

+Files

 stroid.h
 
diff --git a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.js b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.js index 56c4d38..e854266 100644 --- a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.js +++ b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5.js @@ -1,7 +1,10 @@ var dir_3f4f28e99864f6e7d54ad0c93ce0a2a5 = [ [ "config", "dir_dc36fd7496f87f6989d6d6a9445d600c.html", "dir_dc36fd7496f87f6989d6d6a9445d600c" ], + [ "exceptions", "dir_760124f38acb4ebb9f6d85a2d3ae192f.html", "dir_760124f38acb4ebb9f6d85a2d3ae192f" ], [ "IO", "dir_31a6c70da1404d38d1b51e38b19548a1.html", "dir_31a6c70da1404d38d1b51e38b19548a1" ], + [ "refinement", "dir_23ef0af4381c568078c3c1a0b52a2897.html", "dir_23ef0af4381c568078c3c1a0b52a2897" ], [ "topology", "dir_9da86e8abab39b749c6020360d8e4403.html", "dir_9da86e8abab39b749c6020360d8e4403" ], - [ "utils", "dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html", "dir_9d5018b9ddb63a582aa4c6b91bec2f8c" ] + [ "utils", "dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html", "dir_9d5018b9ddb63a582aa4c6b91bec2f8c" ], + [ "stroid.h", "stroid_8h.html", "stroid_8h" ] ]; \ No newline at end of file diff --git a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.map b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.map index 7774bd2..ccde09e 100644 --- a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.map +++ b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.map @@ -1,10 +1,30 @@ - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.md5 b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.md5 index d35bafe..3c20a83 100644 --- a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.md5 +++ b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.md5 @@ -1 +1 @@ -b815693e1badcd6ad0f56a891383b798 \ No newline at end of file +a15c55619a3c29d262782e8125e054f8 \ No newline at end of file diff --git a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.svg b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.svg index 7cc84be..40d78e9 100644 --- a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.svg +++ b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep.svg @@ -1,11 +1,11 @@ - - + @@ -17,74 +17,209 @@ ]]> - + src/include/stroid clusterdir_b0856f6b0d80ccb263b2f415c91f9e17 - -include + +include clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - + dir_3f4f28e99864f6e7d54ad0c93ce0a2a5 -stroid +stroid dir_dc36fd7496f87f6989d6d6a9445d600c - -config + +config + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +8 - + dir_31a6c70da1404d38d1b51e38b19548a1 - - -IO + + +IO + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_31a6c70da1404d38d1b51e38b19548a1 + + + + + + +1 + + + + + +dir_23ef0af4381c568078c3c1a0b52a2897 + + +refinement + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_23ef0af4381c568078c3c1a0b52a2897 + + + + + + +1 - + dir_9da86e8abab39b749c6020360d8e4403 - - -topology + + +topology - - -dir_9da86e8abab39b749c6020360d8e4403->dir_dc36fd7496f87f6989d6d6a9445d600c - - - + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_9da86e8abab39b749c6020360d8e4403 + + + - -3 + +4 - + dir_9d5018b9ddb63a582aa4c6b91bec2f8c - - -utils + + +utils + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +6 + + + + + +dir_760124f38acb4ebb9f6d85a2d3ae192f + + +exceptions + + + + + +dir_31a6c70da1404d38d1b51e38b19548a1->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 + + + + + +dir_23ef0af4381c568078c3c1a0b52a2897->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 + + + + + +dir_9da86e8abab39b749c6020360d8e4403->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +4 + + + + + +dir_9da86e8abab39b749c6020360d8e4403->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +3 diff --git a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep_org.svg b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep_org.svg index 9ab3621..de6b977 100644 --- a/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep_org.svg +++ b/docs/html/dir_3f4f28e99864f6e7d54ad0c93ce0a2a5_dep_org.svg @@ -1,79 +1,214 @@ - - - + + src/include/stroid clusterdir_b0856f6b0d80ccb263b2f415c91f9e17 - -include + +include clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - + dir_3f4f28e99864f6e7d54ad0c93ce0a2a5 -stroid +stroid dir_dc36fd7496f87f6989d6d6a9445d600c - -config + +config + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +8 - + dir_31a6c70da1404d38d1b51e38b19548a1 - - -IO + + +IO + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_31a6c70da1404d38d1b51e38b19548a1 + + + + + + +1 + + + + + +dir_23ef0af4381c568078c3c1a0b52a2897 + + +refinement + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_23ef0af4381c568078c3c1a0b52a2897 + + + + + + +1 - + dir_9da86e8abab39b749c6020360d8e4403 - - -topology + + +topology - - -dir_9da86e8abab39b749c6020360d8e4403->dir_dc36fd7496f87f6989d6d6a9445d600c - - - + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_9da86e8abab39b749c6020360d8e4403 + + + - -3 + +4 - + dir_9d5018b9ddb63a582aa4c6b91bec2f8c - - -utils + + +utils + + + + + +dir_3f4f28e99864f6e7d54ad0c93ce0a2a5->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +6 + + + + + +dir_760124f38acb4ebb9f6d85a2d3ae192f + + +exceptions + + + + + +dir_31a6c70da1404d38d1b51e38b19548a1->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 + + + + + +dir_23ef0af4381c568078c3c1a0b52a2897->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 + + + + + +dir_9da86e8abab39b749c6020360d8e4403->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +4 + + + + + +dir_9da86e8abab39b749c6020360d8e4403->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +3 diff --git a/docs/html/dir_49e56c817e5e54854c35e136979f97ca.html b/docs/html/dir_49e56c817e5e54854c35e136979f97ca.html index c4899d2..1b476d5 100644 --- a/docs/html/dir_49e56c817e5e54854c35e136979f97ca.html +++ b/docs/html/dir_49e56c817e5e54854c35e136979f97ca.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
diff --git a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html index 59c038a..e44d589 100644 --- a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html +++ b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -107,7 +107,7 @@ $(function(){initNavTree('dir_68267d1309a1af8e8297ef4c3efbcdba.html',''); initRe
Directory dependency graph for src:
-
+
+ +

@@ -116,6 +116,8 @@ Directories

 
 lib
 
 python
 
diff --git a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.js b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.js index 43391b2..33782d1 100644 --- a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.js +++ b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.js @@ -1,5 +1,6 @@ var dir_68267d1309a1af8e8297ef4c3efbcdba = [ [ "include", "dir_b0856f6b0d80ccb263b2f415c91f9e17.html", "dir_b0856f6b0d80ccb263b2f415c91f9e17" ], - [ "lib", "dir_c85d3e3c5052e9ad9ce18c6863244a25.html", "dir_c85d3e3c5052e9ad9ce18c6863244a25" ] + [ "lib", "dir_c85d3e3c5052e9ad9ce18c6863244a25.html", "dir_c85d3e3c5052e9ad9ce18c6863244a25" ], + [ "python", "dir_5c0d64f70903e893b1efe571a4b8de29.html", "dir_5c0d64f70903e893b1efe571a4b8de29" ] ]; \ No newline at end of file diff --git a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.map b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.map index 7781d18..1ce09d1 100644 --- a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.map +++ b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.map @@ -1,7 +1,10 @@ - + - - - + + + + + + diff --git a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.md5 b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.md5 index aa33daf..c1c8bac 100644 --- a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.md5 +++ b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.md5 @@ -1 +1 @@ -32f7a5be2d2ff8dc39a2a4b9db9092a6 \ No newline at end of file +02e19dbaf02362b7e506fbcaddd38b33 \ No newline at end of file diff --git a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.svg b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.svg index e9d7332..b353201 100644 --- a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.svg +++ b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep.svg @@ -1,11 +1,11 @@ - - + @@ -22,7 +22,7 @@ clusterdir_68267d1309a1af8e8297ef4c3efbcdba - + @@ -35,8 +35,8 @@ dir_b0856f6b0d80ccb263b2f415c91f9e17 - -include + +include @@ -52,13 +52,35 @@ dir_c85d3e3c5052e9ad9ce18c6863244a25->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -7 + +19 + + + + + +dir_5c0d64f70903e893b1efe571a4b8de29 + + +python + + + + + +dir_5c0d64f70903e893b1efe571a4b8de29->dir_b0856f6b0d80ccb263b2f415c91f9e17 + + + + + + +9 diff --git a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep_org.svg b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep_org.svg index f411c1d..5dbd2cd 100644 --- a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep_org.svg +++ b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba_dep_org.svg @@ -1,17 +1,17 @@ - - + src clusterdir_68267d1309a1af8e8297ef4c3efbcdba - + @@ -24,8 +24,8 @@ dir_b0856f6b0d80ccb263b2f415c91f9e17 - -include + +include @@ -41,13 +41,35 @@ dir_c85d3e3c5052e9ad9ce18c6863244a25->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -7 + +19 + + + + + +dir_5c0d64f70903e893b1efe571a4b8de29 + + +python + + + + + +dir_5c0d64f70903e893b1efe571a4b8de29->dir_b0856f6b0d80ccb263b2f415c91f9e17 + + + + + + +9 diff --git a/docs/html/dir_82887d4f338e92537fa9d809bec8c614.html b/docs/html/dir_82887d4f338e92537fa9d809bec8c614.html index bfa9489..95e9767 100644 --- a/docs/html/dir_82887d4f338e92537fa9d809bec8c614.html +++ b/docs/html/dir_82887d4f338e92537fa9d809bec8c614.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
diff --git a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.map b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.map index 1658d23..7865711 100644 --- a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.map +++ b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.map @@ -1,7 +1,7 @@ - - + + diff --git a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.md5 b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.md5 index 58b4cf5..a14093b 100644 --- a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.md5 +++ b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.md5 @@ -1 +1 @@ -3231d3feafcfb48db197b1ba201573ce \ No newline at end of file +3cccde186a0e6a6a7d1300a70f60b9a3 \ No newline at end of file diff --git a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.svg b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.svg index 846707b..1a5a1b3 100644 --- a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.svg +++ b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep.svg @@ -1,7 +1,7 @@ - dir_82887d4f338e92537fa9d809bec8c614->dir_b0856f6b0d80ccb263b2f415c91f9e17 - + - -2 + +3 diff --git a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep_org.svg b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep_org.svg index fb607cb..2633f6b 100644 --- a/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep_org.svg +++ b/docs/html/dir_82887d4f338e92537fa9d809bec8c614_dep_org.svg @@ -1,7 +1,7 @@ - dir_82887d4f338e92537fa9d809bec8c614->dir_b0856f6b0d80ccb263b2f415c91f9e17 - + - -2 + +3 diff --git a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.html b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.html index 6519573..9cd110c 100644 --- a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.html +++ b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -112,6 +112,8 @@ Directory dependency graph for utils:
+ +

Files

 mesh_stats.cpp
 
 mesh_utils.cpp
 
diff --git a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.js b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.js index 11f97d4..c86be53 100644 --- a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.js +++ b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6.js @@ -1,4 +1,5 @@ var dir_87d18a4dc5174905bfd7d2dc734defe6 = [ + [ "mesh_stats.cpp", "mesh__stats_8cpp.html", "mesh__stats_8cpp" ], [ "mesh_utils.cpp", "mesh__utils_8cpp.html", "mesh__utils_8cpp" ] ]; \ No newline at end of file diff --git a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.map b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.map index b2eaea4..ea00717 100644 --- a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.map +++ b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.map @@ -1,7 +1,7 @@ - - + + diff --git a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.md5 b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.md5 index 7a0f78b..1f8c785 100644 --- a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.md5 +++ b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.md5 @@ -1 +1 @@ -62ece51f3bfca5aa9f7321dddbaaeed5 \ No newline at end of file +35dcfbf6324b586a55502eb25156f8c8 \ No newline at end of file diff --git a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.svg b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.svg index 2334ed7..baafea6 100644 --- a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.svg +++ b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep.svg @@ -1,7 +1,7 @@ - dir_87d18a4dc5174905bfd7d2dc734defe6->dir_b0856f6b0d80ccb263b2f415c91f9e17 - + - -1 + +3 diff --git a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep_org.svg b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep_org.svg index 495c9e6..639a404 100644 --- a/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep_org.svg +++ b/docs/html/dir_87d18a4dc5174905bfd7d2dc734defe6_dep_org.svg @@ -1,7 +1,7 @@ - dir_87d18a4dc5174905bfd7d2dc734defe6->dir_b0856f6b0d80ccb263b2f415c91f9e17 - + - -1 + +3 diff --git a/docs/html/dir_936721fd6a792737eaef7358bcd49428.html b/docs/html/dir_936721fd6a792737eaef7358bcd49428.html index fb70278..864dabd 100644 --- a/docs/html/dir_936721fd6a792737eaef7358bcd49428.html +++ b/docs/html/dir_936721fd6a792737eaef7358bcd49428.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -116,6 +116,8 @@ Files    mapping.cpp   + optimize.cpp +   topology.cpp   diff --git a/docs/html/dir_936721fd6a792737eaef7358bcd49428.js b/docs/html/dir_936721fd6a792737eaef7358bcd49428.js index 59601a1..2c9381d 100644 --- a/docs/html/dir_936721fd6a792737eaef7358bcd49428.js +++ b/docs/html/dir_936721fd6a792737eaef7358bcd49428.js @@ -2,5 +2,6 @@ var dir_936721fd6a792737eaef7358bcd49428 = [ [ "curvilinear.cpp", "curvilinear_8cpp.html", "curvilinear_8cpp" ], [ "mapping.cpp", "mapping_8cpp.html", "mapping_8cpp" ], + [ "optimize.cpp", "optimize_8cpp.html", "optimize_8cpp" ], [ "topology.cpp", "topology_8cpp.html", "topology_8cpp" ] ]; \ No newline at end of file diff --git a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.map b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.map index b40d3bf..8ebaa82 100644 --- a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.map +++ b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.map @@ -1,7 +1,7 @@ - - + + diff --git a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.md5 b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.md5 index 73aeee4..c8a569d 100644 --- a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.md5 +++ b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.md5 @@ -1 +1 @@ -a6827e6f70050682b6d24a1b9d480500 \ No newline at end of file +d1afbfcf5c8f195778cd568bcc291c8f \ No newline at end of file diff --git a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.svg b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.svg index 58e278f..35648bf 100644 --- a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.svg +++ b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep.svg @@ -1,7 +1,7 @@ - dir_936721fd6a792737eaef7358bcd49428->dir_b0856f6b0d80ccb263b2f415c91f9e17 - + - -4 + +6 diff --git a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep_org.svg b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep_org.svg index 638757c..e6481b2 100644 --- a/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep_org.svg +++ b/docs/html/dir_936721fd6a792737eaef7358bcd49428_dep_org.svg @@ -1,7 +1,7 @@ - dir_936721fd6a792737eaef7358bcd49428->dir_b0856f6b0d80ccb263b2f415c91f9e17 - + - -4 + +6 diff --git a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html index 7aaf0e4..3aa925c 100644 --- a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html +++ b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -107,13 +107,17 @@ $(function(){initNavTree('dir_9d5018b9ddb63a582aa4c6b91bec2f8c.html',''); initRe
Directory dependency graph for utils:
-
+
+ + + +

Files

 mesh_stats.h
 
 mesh_utils.h
 
 types.h
 
diff --git a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.js b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.js index 5a1ec02..6a08b61 100644 --- a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.js +++ b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c.js @@ -1,4 +1,6 @@ var dir_9d5018b9ddb63a582aa4c6b91bec2f8c = [ - [ "mesh_utils.h", "mesh__utils_8h.html", "mesh__utils_8h" ] + [ "mesh_stats.h", "mesh__stats_8h.html", "mesh__stats_8h" ], + [ "mesh_utils.h", "mesh__utils_8h.html", "mesh__utils_8h" ], + [ "types.h", "types_8h.html", "types_8h" ] ]; \ No newline at end of file diff --git a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.map b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.map index c2111a6..5805df2 100644 --- a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.map +++ b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.map @@ -1,4 +1,7 @@ - - + + + + + diff --git a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.md5 b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.md5 index 6b3b9ed..7c6ebbd 100644 --- a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.md5 +++ b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.md5 @@ -1 +1 @@ -df55410125b942793bb664278575ee94 \ No newline at end of file +5844954aa4f7a89b3299a9003b4cf928 \ No newline at end of file diff --git a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.svg b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.svg index e6e614b..0d5e6f3 100644 --- a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.svg +++ b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep.svg @@ -1,11 +1,11 @@ - - + @@ -17,22 +17,44 @@ ]]> - + src/include/stroid/utils clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - -stroid + +stroid + + + + + +dir_dc36fd7496f87f6989d6d6a9445d600c + + +config - + dir_9d5018b9ddb63a582aa4c6b91bec2f8c - - -utils + + +utils + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +3 diff --git a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep_org.svg b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep_org.svg index 287dfe5..1d1f2aa 100644 --- a/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep_org.svg +++ b/docs/html/dir_9d5018b9ddb63a582aa4c6b91bec2f8c_dep_org.svg @@ -1,27 +1,49 @@ - - - + + src/include/stroid/utils clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - -stroid + +stroid + + + + + +dir_dc36fd7496f87f6989d6d6a9445d600c + + +config - + dir_9d5018b9ddb63a582aa4c6b91bec2f8c - - -utils + + +utils + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c->dir_dc36fd7496f87f6989d6d6a9445d600c + + + + + + +3 diff --git a/docs/html/dir_9da86e8abab39b749c6020360d8e4403.html b/docs/html/dir_9da86e8abab39b749c6020360d8e4403.html index e7c7a13..04ee96d 100644 --- a/docs/html/dir_9da86e8abab39b749c6020360d8e4403.html +++ b/docs/html/dir_9da86e8abab39b749c6020360d8e4403.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -107,7 +107,7 @@ $(function(){initNavTree('dir_9da86e8abab39b749c6020360d8e4403.html',''); initRe
Directory dependency graph for topology:
-
+
+ +

@@ -116,6 +116,8 @@ Files

 
 mapping.h
 
 optimize.h
 
 topology.h
 
diff --git a/docs/html/dir_9da86e8abab39b749c6020360d8e4403.js b/docs/html/dir_9da86e8abab39b749c6020360d8e4403.js index 7beae3e..2b61b55 100644 --- a/docs/html/dir_9da86e8abab39b749c6020360d8e4403.js +++ b/docs/html/dir_9da86e8abab39b749c6020360d8e4403.js @@ -2,5 +2,6 @@ var dir_9da86e8abab39b749c6020360d8e4403 = [ [ "curvilinear.h", "curvilinear_8h.html", "curvilinear_8h" ], [ "mapping.h", "mapping_8h.html", "mapping_8h" ], + [ "optimize.h", "optimize_8h.html", "optimize_8h" ], [ "topology.h", "topology_8h.html", "topology_8h" ] ]; \ No newline at end of file diff --git a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.map b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.map index f1e1e42..117f74b 100644 --- a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.map +++ b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.map @@ -1,7 +1,10 @@ - - - - - + + + + + + + + diff --git a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.md5 b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.md5 index 03b264d..82af4ae 100644 --- a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.md5 +++ b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.md5 @@ -1 +1 @@ -19d94e8bef8dac3ca0c5b36cb64c7024 \ No newline at end of file +f5fed5f3256b8c95b6bf5a446e11525a \ No newline at end of file diff --git a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.svg b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.svg index 17637ba..da202c4 100644 --- a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.svg +++ b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep.svg @@ -1,11 +1,11 @@ - - + @@ -22,39 +22,61 @@ clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - -stroid + +stroid + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + +utils - + dir_dc36fd7496f87f6989d6d6a9445d600c - - -config + + +config - + dir_9da86e8abab39b749c6020360d8e4403 - - -topology + + +topology + + + + + +dir_9da86e8abab39b749c6020360d8e4403->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 - + dir_9da86e8abab39b749c6020360d8e4403->dir_dc36fd7496f87f6989d6d6a9445d600c - - - + + + - -3 + +4 diff --git a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep_org.svg b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep_org.svg index 3c6e344..2873b17 100644 --- a/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep_org.svg +++ b/docs/html/dir_9da86e8abab39b749c6020360d8e4403_dep_org.svg @@ -1,49 +1,71 @@ - - + src/include/stroid/topology clusterdir_3f4f28e99864f6e7d54ad0c93ce0a2a5 - -stroid + +stroid + + + + + +dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + +utils - + dir_dc36fd7496f87f6989d6d6a9445d600c - - -config + + +config - + dir_9da86e8abab39b749c6020360d8e4403 - - -topology + + +topology + + + + + +dir_9da86e8abab39b749c6020360d8e4403->dir_9d5018b9ddb63a582aa4c6b91bec2f8c + + + + + + +1 - + dir_9da86e8abab39b749c6020360d8e4403->dir_dc36fd7496f87f6989d6d6a9445d600c - - - + + + - -3 + +4 diff --git a/docs/html/dir_b0856f6b0d80ccb263b2f415c91f9e17.html b/docs/html/dir_b0856f6b0d80ccb263b2f415c91f9e17.html index 8f61856..3c812df 100644 --- a/docs/html/dir_b0856f6b0d80ccb263b2f415c91f9e17.html +++ b/docs/html/dir_b0856f6b0d80ccb263b2f415c91f9e17.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
diff --git a/docs/html/dir_c34d5e8363cf0aa3fabc4f3fad3412a4.html b/docs/html/dir_c34d5e8363cf0aa3fabc4f3fad3412a4.html index 4c467af..c883871 100644 --- a/docs/html/dir_c34d5e8363cf0aa3fabc4f3fad3412a4.html +++ b/docs/html/dir_c34d5e8363cf0aa3fabc4f3fad3412a4.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
diff --git a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.html b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.html index 8250efc..47b2be1 100644 --- a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.html +++ b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -107,13 +107,15 @@ $(function(){initNavTree('dir_c85d3e3c5052e9ad9ce18c6863244a25.html',''); initRe
Directory dependency graph for lib:
-
+
+ + diff --git a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.js b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.js index f04ecbb..086323f 100644 --- a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.js +++ b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25.js @@ -1,6 +1,7 @@ var dir_c85d3e3c5052e9ad9ce18c6863244a25 = [ [ "IO", "dir_82887d4f338e92537fa9d809bec8c614.html", "dir_82887d4f338e92537fa9d809bec8c614" ], + [ "refinement", "dir_fbf157f01b55b8656afa0c9222ffb8e3.html", "dir_fbf157f01b55b8656afa0c9222ffb8e3" ], [ "topology", "dir_936721fd6a792737eaef7358bcd49428.html", "dir_936721fd6a792737eaef7358bcd49428" ], [ "utils", "dir_87d18a4dc5174905bfd7d2dc734defe6.html", "dir_87d18a4dc5174905bfd7d2dc734defe6" ] ]; \ No newline at end of file diff --git a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.map b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.map index 82a40c0..e8b75c5 100644 --- a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.map +++ b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.map @@ -1,14 +1,17 @@ - + - - - - - - - - - - + + + + + + + + + + + + + diff --git a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.md5 b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.md5 index e440e21..21653ad 100644 --- a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.md5 +++ b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.md5 @@ -1 +1 @@ -5d9ef3125767d08f4f264c156680ff08 \ No newline at end of file +c68bb87b6379572c3ef0a76a0d75a951 \ No newline at end of file diff --git a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.svg b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.svg index db422b3..c59aa23 100644 --- a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.svg +++ b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep.svg @@ -1,11 +1,11 @@ - - + @@ -22,15 +22,15 @@ clusterdir_68267d1309a1af8e8297ef4c3efbcdba - -src + +src clusterdir_c85d3e3c5052e9ad9ce18c6863244a25 - + @@ -38,8 +38,8 @@ dir_b0856f6b0d80ccb263b2f415c91f9e17 - -include + +include @@ -60,57 +60,79 @@ dir_82887d4f338e92537fa9d809bec8c614->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -2 + +3 + + + + + +dir_fbf157f01b55b8656afa0c9222ffb8e3 + + +refinement + + + + + +dir_fbf157f01b55b8656afa0c9222ffb8e3->dir_b0856f6b0d80ccb263b2f415c91f9e17 + + + + + + +7 - + dir_936721fd6a792737eaef7358bcd49428 - - -topology + + +topology - + dir_936721fd6a792737eaef7358bcd49428->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -4 + +6 - + dir_87d18a4dc5174905bfd7d2dc734defe6 - - -utils + + +utils - + dir_87d18a4dc5174905bfd7d2dc734defe6->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -1 + +3 diff --git a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep_org.svg b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep_org.svg index 8e77321..039305e 100644 --- a/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep_org.svg +++ b/docs/html/dir_c85d3e3c5052e9ad9ce18c6863244a25_dep_org.svg @@ -1,25 +1,25 @@ - - + src/lib clusterdir_68267d1309a1af8e8297ef4c3efbcdba - -src + +src clusterdir_c85d3e3c5052e9ad9ce18c6863244a25 - + @@ -27,8 +27,8 @@ dir_b0856f6b0d80ccb263b2f415c91f9e17 - -include + +include @@ -49,57 +49,79 @@ dir_82887d4f338e92537fa9d809bec8c614->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -2 + +3 + + + + + +dir_fbf157f01b55b8656afa0c9222ffb8e3 + + +refinement + + + + + +dir_fbf157f01b55b8656afa0c9222ffb8e3->dir_b0856f6b0d80ccb263b2f415c91f9e17 + + + + + + +7 - + dir_936721fd6a792737eaef7358bcd49428 - - -topology + + +topology - + dir_936721fd6a792737eaef7358bcd49428->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -4 + +6 - + dir_87d18a4dc5174905bfd7d2dc734defe6 - - -utils + + +utils - + dir_87d18a4dc5174905bfd7d2dc734defe6->dir_b0856f6b0d80ccb263b2f415c91f9e17 - - - + + + - -1 + +3 diff --git a/docs/html/dir_dc36fd7496f87f6989d6d6a9445d600c.html b/docs/html/dir_dc36fd7496f87f6989d6d6a9445d600c.html index e2c59b4..b0f814f 100644 --- a/docs/html/dir_dc36fd7496f87f6989d6d6a9445d600c.html +++ b/docs/html/dir_dc36fd7496f87f6989d6d6a9445d600c.html @@ -31,7 +31,7 @@
Logo diff --git a/docs/html/doxygen_crawl.html b/docs/html/doxygen_crawl.html index b1a22fc..adacb7e 100644 --- a/docs/html/doxygen_crawl.html +++ b/docs/html/doxygen_crawl.html @@ -8,37 +8,120 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -46,57 +129,298 @@ + + + + + + + + + + + + + + + + + + + + - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/files.html b/docs/html/files.html index 526636e..ad6772c 100644 --- a/docs/html/files.html +++ b/docs/html/files.html @@ -31,7 +31,7 @@ @@ -114,23 +114,55 @@ $(function(){initNavTree('files.html',''); initResizable(true); }); - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

Directories

 IO
 
 refinement
 
 topology
 
 utils
-
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
-
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
 ▼ stroid
 ▼ config
 config.h
 ▼ IO
 mesh.h
 ▼ topology
 curvilinear.h
 mapping.h
 topology.h
 ▼ utils
 mesh_utils.h
 ▼ lib
 ▼ IO
 mesh.cpp
 ▼ topology
 curvilinear.cpp
 mapping.cpp
 topology.cpp
 ▼ utils
 mesh_utils.cpp
 ▼ exceptions
 exceptions.h
 stroid_error.h
 ▼ IO
 mesh.h
 ▼ refinement
 uniform.h
 ▼ topology
 curvilinear.h
 mapping.h
 optimize.h
 topology.h
 ▼ utils
 mesh_stats.h
 mesh_utils.h
 types.h
 stroid.h
 ▼ lib
 ▼ IO
 mesh.cpp
 ▼ refinement
 uniform.cpp
 ▼ topology
 curvilinear.cpp
 mapping.cpp
 optimize.cpp
 topology.cpp
 ▼ utils
 mesh_stats.cpp
 mesh_utils.cpp
 ▼ python
 ▼ config
 bindings.cpp
 bindings.h
 ▼ exceptions
 bindings.cpp
 bindings.h
 ▼ IO
 bindings.cpp
 bindings.h
 ▼ refinement
 bindings.cpp
 bindings.h
 ▼ stroid
 __init__.py
 ▼ utils
 bindings.cpp
 bindings.h
 bindings.cpp
diff --git a/docs/html/functions.html b/docs/html/functions.html index 0553578..b8672ca 100644 --- a/docs/html/functions.html +++ b/docs/html/functions.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -101,21 +101,226 @@ $(function(){initNavTree('functions.html',''); initResizable(true); });
-
Here is a list of all class members with links to the classes they belong to:
diff --git a/docs/html/functions_vars.html b/docs/html/functions_vars.html index c8757ae..7e8c24e 100644 --- a/docs/html/functions_vars.html +++ b/docs/html/functions_vars.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -101,21 +101,205 @@ $(function(){initNavTree('functions_vars.html',''); initResizable(true); });
-
Here is a list of all variables with links to the classes they belong to:
diff --git a/docs/html/graph_legend.html b/docs/html/graph_legend.html index ecd9f78..bf406ae 100644 --- a/docs/html/graph_legend.html +++ b/docs/html/graph_legend.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
diff --git a/docs/html/index.html b/docs/html/index.html index 8766633..4ba31d4 100644 --- a/docs/html/index.html +++ b/docs/html/index.html @@ -5,7 +5,7 @@ -stroid: Stroid +stroid: stroid @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -101,32 +101,34 @@ $(function(){initNavTree('index.html',''); initResizable(true); });
-
Stroid
+
stroid
-

-

-A multi-block mesh generation tool for stellar modeling

+

stroid logo

+

+Stroid

+

+A multi-block mesh generation tool for stellar modeling

Stroid is a simple multi-block mesh generation tool designed to generate multi-domain meshes for 3D finite element modeling of stellar physics. It uses the MFEM library for mesh generation and manipulation and is capable of generating high-order curvilinear and non-singular meshes.

Note: Stroid is under active development and is not yet stable. Features and interfaces may change in future releases.

-

-Building and Installing

+

+Building and Installing

Stroid uses meson as its build system, specifically we require version 1.3.0 or higher. Further, stroid depends on C++23 standard library features, so both a compatible compiler and standard template library are required. All other dependencies are handled by meson and will be downloaded and built automatically.

-

-Building

+

+Building

git clone https://github.com/4D-STAR/stroid.git
cd stroid
meson setup build
meson compile -C build
meson test -C build
meson install -C build
-

-Uninstalling

+

+Uninstalling

To uninstall stroid, if you built it using meson and the default ninja backend, you can use the following command

sudo ninja uninstall -C build
-

-Running

+

+Running

Stroid can be used either from the command line or from C++. The command line interface is the simplest way to get started. After installation, the stroid generate command should be available in your terminal.

stroid generate --help

The main way to interface with this is through the subcommands (currently only generate and info are available):

@@ -146,8 +148,8 @@ Running

Further, mesh generation options are loaded from a toml file, a default version of this file can be saved by running

stroid info -d

which will save a default config file to default.toml

-

-Configuration File

+

+Configuration File

Stroid uses a TOML configuration file to specify the parameters for mesh generation. An example configuration file is found below

[main]
refinement_levels = 2
@@ -164,19 +166,25 @@ Configuration File
core_id = 1
envelope_id = 2
vacuum_id = 3
+
core_mapping = "multi_block"
+
+
+
[main.optimization_methods]
+
tmop = false
+
smoothstep = true
- + - + - + @@ -194,45 +202,114 @@ Configuration File - + + + + + + +
Parameter Description Default
refinement_levels Number of uniform refinement levels to apply to the mesh after generation 4
refinement_levels Stellar minimum depth, or uniform depth when vacuum overrides are omitted 4
order The polynomial order of the finite elements in the mesh 3
include_external_domain Whether to include an external domain extending to r_infinity true
r_core The radius of the core region of the star 1.5
r_core The radius of the core region of the star 0.25
r_star The radius of the star 5.0
r_star The radius of the star 1.0
flattening The flattening factor of the star (0 for spherical, >0 for oblate) 0
envelope_id The material ID to assign to the envelope region of the star 2
vacuum_id The material ID to assign to the vacuum region of the star (if included) 3
vacuum_id The material ID to assign to the vacuum region of the star (if included) 3
optimization_methods.tmop The tmop flag enables or disables the use of TMOP ideal shape unit size metric optimization during mesh generation. This can help improve the quality of the generated mesh, but will dramatically increase the time required for mesh generation. false
optimization_methods.smoothstep The smoothstep flag enables or disables the use of a smoothstep function to transition between the core and envelope regions of the star. This can help improve the quality of the generated mesh true
core_mapping The core mapping strategy to use for the mesh generation. Options are "spherified" (legacy) or "multi_block" (conditioned). The multi_block strategy is strongly preferred for its improved condition number. "multi_block"
-

If no configuration file is provided, stroid will use the default parameters listed above. Further, configuration files need only include parameters that differ from the defaults, any parameters not specified will use the default values.

-

-C++ Interface

+

If no configuration file is provided, stroid will use the default parameters listed above. Further, configuration files need only include parameters that differ from the defaults. For compatibility with older TOML files, an omitted core_mapping uses "spherified", and omitted TMOP controls leave optimization disabled. Set core_mapping = "multi_block" explicitly to use the conditioned mapping in a TOML file. Default-constructed C++ and Python MeshConfig objects select "multi_block"; other omitted TOML geometry fields use the defaults from MeshConfig.

+

+Conditioned core mapping

+

There are two core mapping strategies, spherified and multi_block. Generally multi_block should be strongly preferred. The core_mapping = "multi_block" strategy avoids the radial rank loss at the eight corners of the spherified core block. It uses a Cartesian center plus six transition blocks inside the core. The inner cube has circumscribed radius r_core / 2; its six faces connect linearly to the existing spherical r_core interface. If enabled, spheroidal flattening is applied afterwards.

+
cfg = stroid.config.MeshConfig(core_mapping="multi_block", refinement_levels=2)
+
cfg.optimization_methods = stroid.config.OptimizationMethods(tmop=False)
+
mesh = stroid.GenerateMesh(cfg)
+
stroid::GenerateMesh
StroidMesh GenerateMesh(const fourdst::config::Config< stroid::config::MeshConfig > &input)
Definition stroid.h:52
+
stroid::config::MeshConfig
Configuration parameters for stroid mesh generation.
Definition config.h:25
+ +

The optional, non-installed geometry_quality_experiment target may be used to measure the actual high-order geometry at quadrature points, vertices, edges, and near-corner probes. You may build and run it explicitly:

+
meson compile -C build geometry_quality_experiment
+
build/tools/geometry_quality_experiment --orders 4 --refinements 2 \
+
--contraction-probe --probe-order 3 --output core_comparison.csv
+

+Nonconforming vacuum refinement

+

Stroid can keep the star and both ends of the vacuum well resolved while using coarser elements in the vacuum interior. Refinement is isotropic: each refinement splits a hexahedron into eight children. Note however that only one geometric polynomial order applies to every region.

+
[main]
+
refinement_levels = 4
+
vacuum_refinement_levels = 2
+
# Optional: omitted outer depth inherits refinement_levels (4 here).
+
# vacuum_outer_refinement_levels = 4
+
order = 3
+
include_external_domain = true
+
core_mapping = "multi_block"
+
+
[main.optimization_methods]
+
tmop = false
+
smoothstep = true
+

configs/nonconforming_vacuum.toml provides a complete example. The three depth settings are absolute minimum targets measured from the initial block topology:

+ + + + + + + + + +
Setting Applies to Default
refinement_levels Core and envelope 4
vacuum_refinement_levels Vacuum interior Inherit refinement_levels
vacuum_outer_refinement_levels Cells touching the vacuum outer boundary Inherit refinement_levels
+

Omitting both vacuum overrides preserves uniform generation. Supplying either activates the local refinement policy and requires include_external_domain = true. All levels must be nonnegative integers.

+

Stroid enforces that vacuum cells touching the stellar surface match the stellar face subdivision. That is to say that the inner boundary of the vacuum region is conforming to the outer boundary of the stellar region. Further, the outer-boundary cells receive the outer target, and automatic grading limits neighboring refinement depths to one level. This two layer approach is intended to allow for refinement when using compactification maps.

+
import stroid
+
+
cfg = stroid.config.MeshConfig(
+
refinement_levels=4,
+
vacuum_refinement_levels=2,
+
vacuum_outer_refinement_levels=None, # Inherit stellar depth.
+
order=3,
+
core_mapping="multi_block",
+
optimization_methods=stroid.config.OptimizationMethods(tmop=False),
+
)
+
mesh = stroid.GenerateMesh(cfg)
+
features = stroid.stats.MESH_STAT_DEFAULT | stroid.stats.MeshStatFeatures.ELEMENT_COUNT
+
stats = stroid.stats.ComputeMeshStats(mesh, features)
+
print(stats.element_counts.vacuum)
+
print(stats.refinement.vacuum.min_depth, stats.refinement.vacuum.max_depth)
+
print(stats.refinement.geometry_dofs, stats.refinement.geometry_true_dofs)
+
print(stats.conformity.conforming, stats.conformity.n_nonconforming_faces)
+
+
stroid.IO.SaveStroidMesh(mesh, "graded.stroid")
+
restored = stroid.IO.LoadStroidMesh("graded.stroid")
+
stroid.refinement.UniformRefinement(restored, 1)
+
stroid::IO::LoadStroidMesh
std::expected< StroidMesh, std::string > LoadStroidMesh(const std::string &filename)
Definition mesh.cpp:838
+
stroid::IO::SaveStroidMesh
void SaveStroidMesh(const StroidMesh &mesh, const std::string &filename, const std::string &comment="")
Definition mesh.cpp:681
+
stroid::refinement::UniformRefinement
void UniformRefinement(StroidMesh &mesh, size_t levels)
Refine every current leaf, preserving any existing nonconforming hierarchy. Rebuilds constrained geom...
Definition uniform.cpp:14
+
stroid::stats::ComputeMeshStats
MeshStats ComputeMeshStats(const StroidMesh &sm, MeshStatFeatures features=MESH_STAT_DEFAULT, int sample_order=-1)
Definition mesh_stats.cpp:20
+

The UniformRefinement(mesh, n) function adds n levels to every current leaf while preserving the existing grading, and rebuilds the geometry and exterior coordinate. Note that this means that a non-conforming mesh that has been Uniformly refined will still be non-conforming, but the refinement will be applied to all leaves.

+

+Viewing curved meshes in GLVis

+

It is important to note — and potentially confusing if not understood — that GLVis approximates curved faces with flat triangles. At a hanging interface, the same subdivision count on a coarse face and its finer neighbors samples the curved surface at different locations. This can produce apparent gaps even when the finite-element face transformations agree. These gaps are not indications that the mesh itself is non-conforming; rather, they are a visualization artifact.

+

+C++ Interface

Stroid can be used as a library in C++ projects. After installation, include the stroid header and link against the stroid library.

-

A basic example of using stroid in C++ is shown below (note that you will need a glvis instance running on localhost:19916 to visualize the mesh):

#include <memory>
-
#include "mfem.hpp"
-
-
#include "stroid/config/config.h"
-
#include "stroid/IO/mesh.h"
-
#include "stroid/topology/curvilinear.h"
-
#include "stroid/topology/topology.h"
-
-
#include "fourdst/config/config.h"
+

A basic example of using stroid in C++ is shown below (note that you will need a glvis instance running on localhost:19916 to visualize the mesh):

#include "stroid/stroid.h"
int main() {
-
const fourdst::config::Config<stroid::config::MeshConfig> cfg;
+
stroid::config::MeshConfig cfg;
+
cfg.refinement_levels = 4;
+
cfg.vacuum_refinement_levels = 2;
+
cfg.optimization_methods = stroid::config::OptimizationMethods{false, true};
-
const std::unique_ptr<mfem::Mesh> mesh = stroid::topology::BuildSkeleton(cfg);
-
stroid::topology::Finalize(*mesh, cfg);
-
stroid::topology::PromoteToHighOrder(*mesh, cfg);
-
stroid::topology::ProjectMesh(*mesh, cfg);
-
-
-
stroid::IO::ViewMesh(*mesh, "Spheroidal Mesh", stroid::IO::VISUALIZATION_MODE::BOUNDARY_ELEMENT_ID);
+
auto mesh = stroid::GenerateMesh(cfg);
+
stroid::IO::SaveStroidMesh(mesh, "graded.stroid");
+
stroid::IO::ViewMesh(mesh, "Spheroidal Mesh", stroid::IO::VISUALIZATION_MODE::ELEMENT_ID, "localhost", 19916);
}
- - - -
stroid::IO::ViewMesh
void ViewMesh(mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport)
Stream a mesh to a running GLVis server for interactive viewing.
Definition mesh.cpp:25
-
stroid::IO::VISUALIZATION_MODE::BOUNDARY_ELEMENT_ID
@ BOUNDARY_ELEMENT_ID
Color boundary-adjacent elements by boundary attribute/ID.
Definition mesh.h:15
-
stroid::topology::PromoteToHighOrder
void PromoteToHighOrder(mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
Promote a mesh to high-order by attaching an H1 nodal finite element space.
Definition curvilinear.cpp:7
-
stroid::topology::Finalize
void Finalize(mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
Finalize topology, validate orientation, and apply uniform refinement.
Definition topology.cpp:90
-
stroid::topology::ProjectMesh
void ProjectMesh(mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
Project high-order mesh nodes using the configured curvilinear mapping.
Definition curvilinear.cpp:13
-
stroid::topology::BuildSkeleton
std::unique_ptr< mfem::Mesh > BuildSkeleton(const fourdst::config::Config< config::MeshConfig > &config)
Build the initial multi-block mesh topology for the star model.
Definition topology.cpp:10
- -

-Funding

+
stroid::IO::ViewMesh
void ViewMesh(mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
Stream a mesh to a running GLVis server for interactive viewing.
Definition mesh.cpp:727
+
stroid::IO::VISUALIZATION_MODE::ELEMENT_ID
@ ELEMENT_ID
Color elements by their element attribute/ID.
Definition mesh.h:19
+ +
stroid::config::MeshConfig::refinement_levels
std::optional< int > refinement_levels
Stellar refinement depth, or uniform depth when vacuum overrides are absent.
Definition config.h:31
+
stroid::config::MeshConfig::vacuum_refinement_levels
std::optional< int > vacuum_refinement_levels
Minimum refinement depth in the vacuum interior; unset inherits refinement_levels.
Definition config.h:41
+
stroid::config::MeshConfig::optimization_methods
std::optional< OptimizationMethods > optimization_methods
Definition config.h:145
+

+Example Meshes

+

An example mesh with the default configuration parameters is shown below (coloration indicates attribute IDs of different regions): Example Mesh

+

The legacy spherified core mapping strategy is shown below as well Example Spheried Mesh

+

An example of a non-conforming mesh generated with stroid. Note that the gaps between elements are a visualization artifact rather than true gaps within the mesh. Non Conforming Mesh

+

Note that both of these meshes are shown with 3 levels of refinement and polynomial order 3. Blue shows the core domain, yellow shows the envelope domain, while purple shows the vacuum domain.

+

+Funding

Stroid is developed as part of the 4D-STAR project.

4D-STAR is funded by European Research Council (ERC) under the Horizon Europe programme (Synergy Grant agreement No. 101071505: 4D-STAR) Work for this project is funded by the European Union. Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council.

diff --git a/docs/html/mainpage_8md.html b/docs/html/mainpage_8md.html index cc97d16..3be20f5 100644 --- a/docs/html/mainpage_8md.html +++ b/docs/html/mainpage_8md.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
diff --git a/docs/html/mapping_8cpp.html b/docs/html/mapping_8cpp.html index 14d2b1c..fcc4e28 100644 --- a/docs/html/mapping_8cpp.html +++ b/docs/html/mapping_8cpp.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -108,19 +108,26 @@ $(function(){initNavTree('mapping_8cpp.html',''); initResizable(true); });
#include "stroid/topology/mapping.h"
+#include "stroid/exceptions/exceptions.h"
#include <cmath>
#include <algorithm>
+#include <array>
+#include <utility>
+#include <format>
+#include <string>
Include dependency graph for mapping.cpp:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::topology
 Topology construction and curvilinear mapping utilities.
 
+ + +

@@ -134,6 +141,9 @@ Functions

void stroid::topology::TransformPoint (mfem::Vector &pos, const fourdst::config::Config< config::MeshConfig > &config, int attribute_id)
 Map a point from the initial block topology to the curvilinear domain.
 
double stroid::topology::ComputeExteriorCoordinate (const mfem::Vector &logical_position, int attribute, const fourdst::config::Config< config::MeshConfig > &config)
 Compute the compactification coordinate for a point in the curvilinear domain. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.
 
diff --git a/docs/html/mapping_8cpp.js b/docs/html/mapping_8cpp.js index cc17306..9506f2f 100644 --- a/docs/html/mapping_8cpp.js +++ b/docs/html/mapping_8cpp.js @@ -2,5 +2,6 @@ var mapping_8cpp = [ [ "stroid::topology::ApplyEquiangular", "namespacestroid_1_1topology.html#a03f0b29ccf7d427a175de9ff75824b7c", null ], [ "stroid::topology::ApplySpheroidal", "namespacestroid_1_1topology.html#a7fbf58c40c03bc751d53f4a3273744fc", null ], + [ "stroid::topology::ComputeExteriorCoordinate", "namespacestroid_1_1topology.html#a11783fac833cd43c7c59d712912795a8", null ], [ "stroid::topology::TransformPoint", "namespacestroid_1_1topology.html#a394e33bdfafdaccd6edfaae0642d3456", null ] ]; \ No newline at end of file diff --git a/docs/html/mapping_8cpp__incl.map b/docs/html/mapping_8cpp__incl.map index b7e5516..d1bc94e 100644 --- a/docs/html/mapping_8cpp__incl.map +++ b/docs/html/mapping_8cpp__incl.map @@ -1,15 +1,38 @@ - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/mapping_8cpp__incl.md5 b/docs/html/mapping_8cpp__incl.md5 index 1f62239..568ab13 100644 --- a/docs/html/mapping_8cpp__incl.md5 +++ b/docs/html/mapping_8cpp__incl.md5 @@ -1 +1 @@ -4bdfcf54667cf17336f1a89bd11d9f51 \ No newline at end of file +092087a1dae722af355ed84c57a30031 \ No newline at end of file diff --git a/docs/html/mapping_8cpp__incl.svg b/docs/html/mapping_8cpp__incl.svg index 165eff4..3fed2b1 100644 --- a/docs/html/mapping_8cpp__incl.svg +++ b/docs/html/mapping_8cpp__incl.svg @@ -1,13 +1,12 @@ - - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + src/lib/topology/mapping.cpp Node1 - -src/lib/topology/mapping.cpp + +src/lib/topology/mapping.cpp @@ -32,8 +68,8 @@ Node2 - -stroid/topology/mapping.h + +stroid/topology/mapping.h @@ -41,26 +77,8 @@ Node1->Node2 - - - - - - - -Node6 - - -cmath - - - - - -Node1->Node6 - - - + + @@ -68,17 +86,125 @@ Node7 - -algorithm + +string - + Node1->Node7 - - - + + + + + + + + +Node8 + + +format + + + + + +Node1->Node8 + + + + + + + + +Node11 + + +stroid/exceptions/exceptions.h + + + + + +Node1->Node11 + + + + + + + + +Node14 + + +cmath + + + + + +Node1->Node14 + + + + + + + + +Node15 + + +algorithm + + + + + +Node1->Node15 + + + + + + + + +Node16 + + +array + + + + + +Node1->Node16 + + + + + + + + +Node17 + + +utility + + + + + +Node1->Node17 + + + @@ -86,8 +212,8 @@ Node3 - -mfem.hpp + +mfem.hpp @@ -95,8 +221,8 @@ Node2->Node3 - - + + @@ -104,8 +230,8 @@ Node4 - -stroid/config/config.h + +stroid/config/config.h @@ -113,8 +239,26 @@ Node2->Node4 - - + + + + + + + +Node10 + + +fourdst/config/config.h + + + + + +Node2->Node10 + + + @@ -122,22 +266,143 @@ Node5 - -fourdst/config/config.h + +cstdint - - -Node2->Node5 - - - + + +Node4->Node5 + + + + + + + + +Node6 + + +optional + + + + + +Node4->Node6 + + + + + + + + +Node4->Node7 + + + + + + + + +Node4->Node8 + + + + + + + + +Node9 + + +sstream + + + + + +Node4->Node9 + + + + + + + + +Node12 + + +stroid/exceptions/stroid +_error.h + + + + + +Node11->Node12 + + + + + + + + +Node12->Node7 + + + + + + + + +Node13 + + +exception + + + + + +Node12->Node13 + + + + + + + + + + + + + + + + + + + + + Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -113,19 +113,21 @@ $(function(){initNavTree('mapping_8h.html',''); initResizable(true); });
Include dependency graph for mapping.h:
-
+
This graph shows which files directly or indirectly include this file:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::topology
 Topology construction and curvilinear mapping utilities.
 
+ + +

@@ -142,6 +144,9 @@ Functions

void stroid::topology::TransformPoint (mfem::Vector &pos, const fourdst::config::Config< config::MeshConfig > &config, int attribute_id)
 Map a point from the initial block topology to the curvilinear domain.
 
double stroid::topology::ComputeExteriorCoordinate (const mfem::Vector &logical_position, int attribute, const fourdst::config::Config< config::MeshConfig > &config)
 Compute the compactification coordinate for a point in the curvilinear domain. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.
 
diff --git a/docs/html/mapping_8h.js b/docs/html/mapping_8h.js index b37f73a..195d161 100644 --- a/docs/html/mapping_8h.js +++ b/docs/html/mapping_8h.js @@ -3,5 +3,6 @@ var mapping_8h = [ "stroid::topology::ApplyEquiangular", "namespacestroid_1_1topology.html#a03f0b29ccf7d427a175de9ff75824b7c", null ], [ "stroid::topology::ApplyKelvin", "namespacestroid_1_1topology.html#a59c54a10f726d323f8506b4a2edd7467", null ], [ "stroid::topology::ApplySpheroidal", "namespacestroid_1_1topology.html#a7fbf58c40c03bc751d53f4a3273744fc", null ], + [ "stroid::topology::ComputeExteriorCoordinate", "namespacestroid_1_1topology.html#a11783fac833cd43c7c59d712912795a8", null ], [ "stroid::topology::TransformPoint", "namespacestroid_1_1topology.html#a394e33bdfafdaccd6edfaae0642d3456", null ] ]; \ No newline at end of file diff --git a/docs/html/mapping_8h__dep__incl.map b/docs/html/mapping_8h__dep__incl.map index 0525b5a..6857ff7 100644 --- a/docs/html/mapping_8h__dep__incl.map +++ b/docs/html/mapping_8h__dep__incl.map @@ -1,7 +1,11 @@ - - - - - + + + + + + + + + diff --git a/docs/html/mapping_8h__dep__incl.md5 b/docs/html/mapping_8h__dep__incl.md5 index ff1680f..1854b4f 100644 --- a/docs/html/mapping_8h__dep__incl.md5 +++ b/docs/html/mapping_8h__dep__incl.md5 @@ -1 +1 @@ -f79ba543c56f1aac55d093e48f7a369f \ No newline at end of file +facb1c62b4a65ab75fd179bd1f334a7b \ No newline at end of file diff --git a/docs/html/mapping_8h__dep__incl.svg b/docs/html/mapping_8h__dep__incl.svg index af5d61e..7a5681d 100644 --- a/docs/html/mapping_8h__dep__incl.svg +++ b/docs/html/mapping_8h__dep__incl.svg @@ -1,11 +1,11 @@ - - + @@ -17,24 +17,25 @@ ]]> - + src/include/stroid/topology/mapping.h Node1 - -src/include/stroid -/topology/mapping.h + +src/include/stroid +/topology/mapping.h Node2 - - -src/lib/topology/curvilinear.cpp + + +src/include/stroid +/stroid.h @@ -42,26 +43,62 @@ Node1->Node2 - - + + + + + + + +Node4 + + +src/lib/topology/curvilinear.cpp + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +src/lib/topology/mapping.cpp + + + + + +Node1->Node5 + + + Node3 - - -src/lib/topology/mapping.cpp + + +src/python/bindings.cpp - - -Node1->Node3 - - - + + +Node2->Node3 + + + diff --git a/docs/html/mapping_8h__dep__incl_org.svg b/docs/html/mapping_8h__dep__incl_org.svg index 50d3d12..e051e61 100644 --- a/docs/html/mapping_8h__dep__incl_org.svg +++ b/docs/html/mapping_8h__dep__incl_org.svg @@ -1,29 +1,30 @@ - - - + + src/include/stroid/topology/mapping.h Node1 - -src/include/stroid -/topology/mapping.h + +src/include/stroid +/topology/mapping.h Node2 - - -src/lib/topology/curvilinear.cpp + + +src/include/stroid +/stroid.h @@ -31,26 +32,62 @@ Node1->Node2 - - + + + + + + + +Node4 + + +src/lib/topology/curvilinear.cpp + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +src/lib/topology/mapping.cpp + + + + + +Node1->Node5 + + + Node3 - - -src/lib/topology/mapping.cpp + + +src/python/bindings.cpp - - -Node1->Node3 - - - + + +Node2->Node3 + + + diff --git a/docs/html/mapping_8h__incl.map b/docs/html/mapping_8h__incl.map index 374b151..52f7890 100644 --- a/docs/html/mapping_8h__incl.map +++ b/docs/html/mapping_8h__incl.map @@ -1,9 +1,19 @@ - - - - - - - + + + + + + + + + + + + + + + + + diff --git a/docs/html/mapping_8h__incl.md5 b/docs/html/mapping_8h__incl.md5 index 667d70f..e79a68c 100644 --- a/docs/html/mapping_8h__incl.md5 +++ b/docs/html/mapping_8h__incl.md5 @@ -1 +1 @@ -86a889bd4bc95c54b54525ea6b373586 \ No newline at end of file +553587845cda9842c6a499ea49f844e6 \ No newline at end of file diff --git a/docs/html/mapping_8h__incl.svg b/docs/html/mapping_8h__incl.svg index f2af59e..f87e47e 100644 --- a/docs/html/mapping_8h__incl.svg +++ b/docs/html/mapping_8h__incl.svg @@ -1,11 +1,11 @@ - - + @@ -17,15 +17,15 @@ ]]> - + src/include/stroid/topology/mapping.h Node1 - -src/include/stroid -/topology/mapping.h + +src/include/stroid +/topology/mapping.h @@ -33,8 +33,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -42,8 +42,8 @@ Node1->Node2 - - + + @@ -51,8 +51,8 @@ Node3 - -stroid/config/config.h + +stroid/config/config.h @@ -60,8 +60,26 @@ Node1->Node3 - - + + + + + + + +Node9 + + +fourdst/config/config.h + + + + + +Node1->Node9 + + + @@ -69,17 +87,89 @@ Node4 - -fourdst/config/config.h + +cstdint - - -Node1->Node4 - - - + + +Node3->Node4 + + + + + + + + +Node5 + + +optional + + + + + +Node3->Node5 + + + + + + + + +Node6 + + +string + + + + + +Node3->Node6 + + + + + + + + +Node7 + + +format + + + + + +Node3->Node7 + + + + + + + + +Node8 + + +sstream + + + + + +Node3->Node8 + + + diff --git a/docs/html/mapping_8h__incl_org.svg b/docs/html/mapping_8h__incl_org.svg index 64bfccc..ba70926 100644 --- a/docs/html/mapping_8h__incl_org.svg +++ b/docs/html/mapping_8h__incl_org.svg @@ -1,20 +1,20 @@ - - - + + src/include/stroid/topology/mapping.h Node1 - -src/include/stroid -/topology/mapping.h + +src/include/stroid +/topology/mapping.h @@ -22,8 +22,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -31,8 +31,8 @@ Node1->Node2 - - + + @@ -40,8 +40,8 @@ Node3 - -stroid/config/config.h + +stroid/config/config.h @@ -49,8 +49,26 @@ Node1->Node3 - - + + + + + + + +Node9 + + +fourdst/config/config.h + + + + + +Node1->Node9 + + + @@ -58,17 +76,89 @@ Node4 - -fourdst/config/config.h + +cstdint - - -Node1->Node4 - - - + + +Node3->Node4 + + + + + + + + +Node5 + + +optional + + + + + +Node3->Node5 + + + + + + + + +Node6 + + +string + + + + + +Node3->Node6 + + + + + + + + +Node7 + + +format + + + + + +Node3->Node7 + + + + + + + + +Node8 + + +sstream + + + + + +Node3->Node8 + + + diff --git a/docs/html/menudata.js b/docs/html/menudata.js index c2de7d0..17f865a 100644 --- a/docs/html/menudata.js +++ b/docs/html/menudata.js @@ -27,14 +27,98 @@ var menudata={children:[ {text:"Namespaces",url:"namespaces.html",children:[ {text:"Namespace List",url:"namespaces.html"}, {text:"Namespace Members",url:"namespacemembers.html",children:[ -{text:"All",url:"namespacemembers.html"}, -{text:"Functions",url:"namespacemembers_func.html"}, +{text:"All",url:"namespacemembers.html",children:[ +{text:"_",url:"namespacemembers.html#index__5F"}, +{text:"a",url:"namespacemembers.html#index_a"}, +{text:"b",url:"namespacemembers.html#index_b"}, +{text:"c",url:"namespacemembers.html#index_c"}, +{text:"e",url:"namespacemembers.html#index_e"}, +{text:"f",url:"namespacemembers.html#index_f"}, +{text:"g",url:"namespacemembers.html#index_g"}, +{text:"h",url:"namespacemembers.html#index_h"}, +{text:"l",url:"namespacemembers.html#index_l"}, +{text:"m",url:"namespacemembers.html#index_m"}, +{text:"o",url:"namespacemembers.html#index_o"}, +{text:"p",url:"namespacemembers.html#index_p"}, +{text:"r",url:"namespacemembers.html#index_r"}, +{text:"s",url:"namespacemembers.html#index_s"}, +{text:"t",url:"namespacemembers.html#index_t"}, +{text:"u",url:"namespacemembers.html#index_u"}, +{text:"v",url:"namespacemembers.html#index_v"}]}, +{text:"Functions",url:"namespacemembers_func.html",children:[ +{text:"a",url:"namespacemembers_func.html#index_a"}, +{text:"b",url:"namespacemembers_func.html#index_b"}, +{text:"c",url:"namespacemembers_func.html#index_c"}, +{text:"e",url:"namespacemembers_func.html#index_e"}, +{text:"f",url:"namespacemembers_func.html#index_f"}, +{text:"g",url:"namespacemembers_func.html#index_g"}, +{text:"h",url:"namespacemembers_func.html#index_h"}, +{text:"l",url:"namespacemembers_func.html#index_l"}, +{text:"m",url:"namespacemembers_func.html#index_m"}, +{text:"o",url:"namespacemembers_func.html#index_o"}, +{text:"p",url:"namespacemembers_func.html#index_p"}, +{text:"r",url:"namespacemembers_func.html#index_r"}, +{text:"s",url:"namespacemembers_func.html#index_s"}, +{text:"t",url:"namespacemembers_func.html#index_t"}, +{text:"u",url:"namespacemembers_func.html#index_u"}, +{text:"v",url:"namespacemembers_func.html#index_v"}]}, +{text:"Variables",url:"namespacemembers_vars.html"}, {text:"Enumerations",url:"namespacemembers_enum.html"}]}]}, {text:"Classes",url:"annotated.html",children:[ {text:"Class List",url:"annotated.html"}, {text:"Class Index",url:"classes.html"}, +{text:"Class Hierarchy",url:"inherits.html"}, {text:"Class Members",url:"functions.html",children:[ -{text:"All",url:"functions.html"}, -{text:"Variables",url:"functions_vars.html"}]}]}, +{text:"All",url:"functions.html",children:[ +{text:"a",url:"functions.html#index_a"}, +{text:"b",url:"functions.html#index_b"}, +{text:"c",url:"functions.html#index_c"}, +{text:"d",url:"functions.html#index_d"}, +{text:"e",url:"functions.html#index_e"}, +{text:"f",url:"functions.html#index_f"}, +{text:"g",url:"functions.html#index_g"}, +{text:"h",url:"functions.html#index_h"}, +{text:"i",url:"functions.html#index_i"}, +{text:"j",url:"functions.html#index_j"}, +{text:"m",url:"functions.html#index_m"}, +{text:"n",url:"functions.html#index_n"}, +{text:"o",url:"functions.html#index_o"}, +{text:"p",url:"functions.html#index_p"}, +{text:"r",url:"functions.html#index_r"}, +{text:"s",url:"functions.html#index_s"}, +{text:"t",url:"functions.html#index_t"}, +{text:"v",url:"functions.html#index_v"}, +{text:"w",url:"functions.html#index_w"}, +{text:"x",url:"functions.html#index_x"}, +{text:"y",url:"functions.html#index_y"}, +{text:"z",url:"functions.html#index_z"}, +{text:"~",url:"functions.html#index__7E"}]}, +{text:"Functions",url:"functions_func.html"}, +{text:"Variables",url:"functions_vars.html",children:[ +{text:"a",url:"functions_vars.html#index_a"}, +{text:"b",url:"functions_vars.html#index_b"}, +{text:"c",url:"functions_vars.html#index_c"}, +{text:"d",url:"functions_vars.html#index_d"}, +{text:"e",url:"functions_vars.html#index_e"}, +{text:"f",url:"functions_vars.html#index_f"}, +{text:"g",url:"functions_vars.html#index_g"}, +{text:"h",url:"functions_vars.html#index_h"}, +{text:"i",url:"functions_vars.html#index_i"}, +{text:"j",url:"functions_vars.html#index_j"}, +{text:"m",url:"functions_vars.html#index_m"}, +{text:"n",url:"functions_vars.html#index_n"}, +{text:"o",url:"functions_vars.html#index_o"}, +{text:"p",url:"functions_vars.html#index_p"}, +{text:"r",url:"functions_vars.html#index_r"}, +{text:"s",url:"functions_vars.html#index_s"}, +{text:"t",url:"functions_vars.html#index_t"}, +{text:"v",url:"functions_vars.html#index_v"}, +{text:"w",url:"functions_vars.html#index_w"}, +{text:"x",url:"functions_vars.html#index_x"}, +{text:"y",url:"functions_vars.html#index_y"}, +{text:"z",url:"functions_vars.html#index_z"}]}]}]}, {text:"Files",url:"files.html",children:[ -{text:"File List",url:"files.html"}]}]} +{text:"File List",url:"files.html"}, +{text:"File Members",url:"globals.html",children:[ +{text:"All",url:"globals.html"}, +{text:"Functions",url:"globals_func.html"}]}]}]} diff --git a/docs/html/mesh_8cpp.html b/docs/html/mesh_8cpp.html index ef54686..7f4231e 100644 --- a/docs/html/mesh_8cpp.html +++ b/docs/html/mesh_8cpp.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -110,36 +110,72 @@ $(function(){initNavTree('mesh_8cpp.html',''); initResizable(true); });
#include "mfem.hpp"
#include "stroid/config/config.h"
#include "stroid/IO/mesh.h"
+#include "stroid/topology/curvilinear.h"
+#include <algorithm>
+#include <charconv>
+#include <cmath>
+#include "stroid/version.h"
#include <fstream>
+#include <iomanip>
#include <iostream>
#include <cstdint>
+#include <format>
+#include <chrono>
+#include <string>
+#include <string_view>
+#include <expected>
+#include <stdexcept>
+#include <concepts>
+#include <limits>
+#include <vector>
Include dependency graph for mesh.cpp:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::IO
 Mesh serialization and visualization helpers.
 
+ + + + + - - - - - - + + + + + + + + + + + + + + + + + + + +

Functions

void stroid::IO::SaveStroidMesh (const StroidMesh &mesh, const std::string &filename, const std::string &comment="")
 
void stroid::IO::SaveMesh (const mfem::Mesh &mesh, const std::string &filename)
 Save a mesh to MFEM's native .mesh format.
 
void stroid::IO::SaveMesh (const stroid::StroidMesh &mesh, const std::string &filename)
 Overload of SaveMesh which accepts a StroidMesh type and will internally unpack it.
 
void stroid::IO::SaveVTU (mfem::Mesh &mesh, const std::string &exportName)
 Save a mesh as a ParaView VTU dataset.
 
void stroid::IO::ViewMesh (mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport)
 Stream a mesh to a running GLVis server for interactive viewing.
 
void stroid::IO::VisualizeFaceValence (mfem::Mesh &mesh)
 Visualize boundary face valence (1=surface, 2=internal).
 
void stroid::IO::SaveVTU (const stroid::StroidMesh &mesh, const std::string &exportName)
 Overload of SaveVTU which accepts a StroidMesh type and will internally unpack it.
 
std::unique_ptr< mfem::Mesh > stroid::IO::MakeConformingVisualizationMesh (const mfem::Mesh &mesh)
 Make a display-only mesh copy with matching face subdivisions. This is purely for visualization and should not be used for any science goals.
 
void stroid::IO::ViewMesh (mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
 Stream a mesh to a running GLVis server for interactive viewing.
 
void stroid::IO::ViewMesh (const stroid::StroidMesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
 
void stroid::IO::VisualizeFaceValence (mfem::Mesh &mesh, const std::string &vishost, int visport, bool conforming_display=true)
 Color boundary-adjacent elements by face valence (1=surface, 2=internal). Untagged elements are zero; elements touching several tagged faces use the maximum valence. Values are computed before display subdivision.
 
void stroid::IO::VisualizeFaceValence (const stroid::StroidMesh &mesh, const std::string &vishost, int visport, bool conforming_display=true)
 
std::expected< StroidMesh, std::string > stroid::IO::ParseStroidMesh (std::istream &is)
 
std::expected< StroidMesh, std::string > stroid::IO::LoadStroidMesh (const std::string &filename)
 
diff --git a/docs/html/mesh_8cpp.js b/docs/html/mesh_8cpp.js index 988fa2f..4ba166b 100644 --- a/docs/html/mesh_8cpp.js +++ b/docs/html/mesh_8cpp.js @@ -1,7 +1,15 @@ var mesh_8cpp = [ + [ "stroid::IO::LoadStroidMesh", "namespacestroid_1_1_i_o.html#a3f39dc149d5650468b579c76d00f991d", null ], + [ "stroid::IO::MakeConformingVisualizationMesh", "namespacestroid_1_1_i_o.html#a7426b1e664be45cbf791167748d4feb8", null ], + [ "stroid::IO::ParseStroidMesh", "namespacestroid_1_1_i_o.html#a20ae517986b9c27d23ef5f0ab704b247", null ], [ "stroid::IO::SaveMesh", "namespacestroid_1_1_i_o.html#aeb567ddc70ff2d064c139dee87575830", null ], + [ "stroid::IO::SaveMesh", "namespacestroid_1_1_i_o.html#ad7721ff3eda0ad42365955ea33da2b0a", null ], + [ "stroid::IO::SaveStroidMesh", "namespacestroid_1_1_i_o.html#ab854167b428c1a77597d9bb3a972b363", null ], + [ "stroid::IO::SaveVTU", "namespacestroid_1_1_i_o.html#ae0fc8e0663da26ff11be71fb1b5a0b0e", null ], [ "stroid::IO::SaveVTU", "namespacestroid_1_1_i_o.html#ab4c8bda7ab370e34376a7832fbf0951e", null ], - [ "stroid::IO::ViewMesh", "namespacestroid_1_1_i_o.html#a496f5c16eaffda5922a0b96c1f525dab", null ], - [ "stroid::IO::VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a8100e130b3a49fdee48bc3c4d4e63963", null ] + [ "stroid::IO::ViewMesh", "namespacestroid_1_1_i_o.html#a6491a99d6d2859b2c098b94f2f8171d3", null ], + [ "stroid::IO::ViewMesh", "namespacestroid_1_1_i_o.html#a7bc6daa0f9ef8327355022363e1db3fb", null ], + [ "stroid::IO::VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a26155a525b34257a3eb2305e477b6bef", null ], + [ "stroid::IO::VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a516d260163e0b6ac000b301b0b8cf4bb", null ] ]; \ No newline at end of file diff --git a/docs/html/mesh_8cpp__incl.map b/docs/html/mesh_8cpp__incl.map index c24f84f..1a750ac 100644 --- a/docs/html/mesh_8cpp__incl.map +++ b/docs/html/mesh_8cpp__incl.map @@ -1,18 +1,75 @@ - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/mesh_8cpp__incl.md5 b/docs/html/mesh_8cpp__incl.md5 index f7498e7..4a41229 100644 --- a/docs/html/mesh_8cpp__incl.md5 +++ b/docs/html/mesh_8cpp__incl.md5 @@ -1 +1 @@ -03de2118e8632a757bd4ee512ec2bd8a \ No newline at end of file +4c8fb452f93258fec2fa9334656fc635 \ No newline at end of file diff --git a/docs/html/mesh_8cpp__incl.svg b/docs/html/mesh_8cpp__incl.svg index db9c517..52ac683 100644 --- a/docs/html/mesh_8cpp__incl.svg +++ b/docs/html/mesh_8cpp__incl.svg @@ -1,13 +1,12 @@ - - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + src/lib/IO/mesh.cpp Node1 - -src/lib/IO/mesh.cpp + +src/lib/IO/mesh.cpp @@ -32,8 +68,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -41,8 +77,8 @@ Node1->Node2 - - + + @@ -50,8 +86,8 @@ Node3 - -stroid/config/config.h + +stroid/config/config.h @@ -59,26 +95,26 @@ Node1->Node3 - - + + Node4 - - -stroid/IO/mesh.h + + +cstdint - + Node1->Node4 - - - + + + @@ -86,17 +122,17 @@ Node6 - -fstream + +string - + Node1->Node6 - - - + + + @@ -104,44 +140,314 @@ Node7 - -iostream + +format - + Node1->Node7 - - - + + + - - -Node8 - - -cstdint + + +Node9 + + +stroid/IO/mesh.h - - -Node1->Node8 - - - + + +Node1->Node9 + + + - - -Node4->Node2 - - - + + +Node10 + + +expected + + + + + +Node1->Node10 + + + + + + + + +Node16 + + +stroid/topology/curvilinear.h + + + + + +Node1->Node16 + + + + + + + + +Node18 + + +algorithm + + + + + +Node1->Node18 + + + + + + + + +Node19 + + +charconv + + + + + +Node1->Node19 + + + + + + + + +Node20 + + +cmath + + + + + +Node1->Node20 + + + + + + + + +Node21 + + +stroid/version.h + + + + + +Node1->Node21 + + + + + + + + +Node22 + + +fstream + + + + + +Node1->Node22 + + + + + + + + +Node23 + + +iomanip + + + + + +Node1->Node23 + + + + + + + + +Node24 + + +iostream + + + + + +Node1->Node24 + + + + + + + + +Node25 + + +chrono + + + + + +Node1->Node25 + + + + + + + + +Node26 + + +string_view + + + + + +Node1->Node26 + + + + + + + + +Node27 + + +stdexcept + + + + + +Node1->Node27 + + + + + + + + +Node28 + + +concepts + + + + + +Node1->Node28 + + + + + + + + +Node29 + + +limits + + + + + +Node1->Node29 + + + + + + + + +Node30 + + +vector + + + + + +Node1->Node30 + + + + + + + + +Node3->Node4 + + + @@ -149,22 +455,286 @@ Node5 - -string + +optional - - -Node4->Node5 - - - + + +Node3->Node5 + + + + + + + + +Node3->Node6 + + + + + + + + +Node3->Node7 + + + + + + + + +Node8 + + +sstream + + + + + +Node3->Node8 + + + + + + + + +Node9->Node2 + + + + + + + + +Node9->Node6 + + + + + + + + +Node9->Node10 + + + + + + + + +Node11 + + +istream + + + + + +Node9->Node11 + + + + + + + + +Node12 + + +memory + + + + + +Node9->Node12 + + + + + + + + +Node13 + + +stroid/utils/types.h + + + + + +Node9->Node13 + + + + + + + + +Node13->Node2 + + + + + + + + +Node13->Node3 + + + + + + + + +Node13->Node6 + + + + + + + + +Node13->Node10 + + + + + + + + +Node13->Node12 + + + + + + + + +Node14 + + +unordered_map + + + + + +Node13->Node14 + + + + + + + + +Node15 + + +variant + + + + + +Node13->Node15 + + + + + + + + +Node16->Node2 + + + + + + + + +Node16->Node3 + + + + + + + + +Node16->Node13 + + + + + + + + +Node17 + + +fourdst/config/config.h + + + + + +Node16->Node17 + + + + + + + + + + + + + + + + + + + + + Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -109,23 +109,29 @@ $(function(){initNavTree('mesh_8h.html',''); initResizable(true); });
#include <string>
+#include <expected>
+#include <istream>
+#include <memory>
#include "mfem.hpp"
+#include "stroid/utils/types.h"
Include dependency graph for mesh.h:
-
+
This graph shows which files directly or indirectly include this file:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::IO
 Mesh serialization and visualization helpers.
 

@@ -139,18 +145,37 @@ Enumerations

+ + + + + - - - - - - + + + + + + + + + + + + + + + + + + + +

Functions

void stroid::IO::SaveStroidMesh (const StroidMesh &mesh, const std::string &filename, const std::string &comment="")
 
void stroid::IO::SaveMesh (const mfem::Mesh &mesh, const std::string &filename)
 Save a mesh to MFEM's native .mesh format.
 
void stroid::IO::SaveMesh (const stroid::StroidMesh &mesh, const std::string &filename)
 Overload of SaveMesh which accepts a StroidMesh type and will internally unpack it.
 
void stroid::IO::SaveVTU (mfem::Mesh &mesh, const std::string &exportName)
 Save a mesh as a ParaView VTU dataset.
 
void stroid::IO::ViewMesh (mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport)
 Stream a mesh to a running GLVis server for interactive viewing.
 
void stroid::IO::VisualizeFaceValence (mfem::Mesh &mesh)
 Visualize boundary face valence (1=surface, 2=internal).
 
void stroid::IO::SaveVTU (const stroid::StroidMesh &mesh, const std::string &exportName)
 Overload of SaveVTU which accepts a StroidMesh type and will internally unpack it.
 
std::unique_ptr< mfem::Mesh > stroid::IO::MakeConformingVisualizationMesh (const mfem::Mesh &mesh)
 Make a display-only mesh copy with matching face subdivisions. This is purely for visualization and should not be used for any science goals.
 
void stroid::IO::ViewMesh (mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
 Stream a mesh to a running GLVis server for interactive viewing.
 
void stroid::IO::ViewMesh (const stroid::StroidMesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
 
void stroid::IO::VisualizeFaceValence (mfem::Mesh &mesh, const std::string &vishost, int visport, bool conforming_display=true)
 Color boundary-adjacent elements by face valence (1=surface, 2=internal). Untagged elements are zero; elements touching several tagged faces use the maximum valence. Values are computed before display subdivision.
 
void stroid::IO::VisualizeFaceValence (const stroid::StroidMesh &mesh, const std::string &vishost, int visport, bool conforming_display=true)
 
std::expected< StroidMesh, std::string > stroid::IO::ParseStroidMesh (std::istream &is)
 
std::expected< StroidMesh, std::string > stroid::IO::LoadStroidMesh (const std::string &filename)
 
diff --git a/docs/html/mesh_8h.js b/docs/html/mesh_8h.js index 753b3a9..f6d5f19 100644 --- a/docs/html/mesh_8h.js +++ b/docs/html/mesh_8h.js @@ -5,8 +5,16 @@ var mesh_8h = [ "stroid::IO::VISUALIZATION_MODE::ELEMENT_ID", "namespacestroid_1_1_i_o.html#ad4048304d8a0c7075d2b2a6e465d0b6eac31a2fe3e97d218a154c1947b43d6bbf", null ], [ "stroid::IO::VISUALIZATION_MODE::BOUNDARY_ELEMENT_ID", "namespacestroid_1_1_i_o.html#ad4048304d8a0c7075d2b2a6e465d0b6eaee96e14c2b71bd59252006289ba464cf", null ] ] ], + [ "stroid::IO::LoadStroidMesh", "namespacestroid_1_1_i_o.html#a3f39dc149d5650468b579c76d00f991d", null ], + [ "stroid::IO::MakeConformingVisualizationMesh", "namespacestroid_1_1_i_o.html#a7426b1e664be45cbf791167748d4feb8", null ], + [ "stroid::IO::ParseStroidMesh", "namespacestroid_1_1_i_o.html#a20ae517986b9c27d23ef5f0ab704b247", null ], [ "stroid::IO::SaveMesh", "namespacestroid_1_1_i_o.html#aeb567ddc70ff2d064c139dee87575830", null ], + [ "stroid::IO::SaveMesh", "namespacestroid_1_1_i_o.html#ad7721ff3eda0ad42365955ea33da2b0a", null ], + [ "stroid::IO::SaveStroidMesh", "namespacestroid_1_1_i_o.html#ab854167b428c1a77597d9bb3a972b363", null ], + [ "stroid::IO::SaveVTU", "namespacestroid_1_1_i_o.html#ae0fc8e0663da26ff11be71fb1b5a0b0e", null ], [ "stroid::IO::SaveVTU", "namespacestroid_1_1_i_o.html#ab4c8bda7ab370e34376a7832fbf0951e", null ], - [ "stroid::IO::ViewMesh", "namespacestroid_1_1_i_o.html#a496f5c16eaffda5922a0b96c1f525dab", null ], - [ "stroid::IO::VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a8100e130b3a49fdee48bc3c4d4e63963", null ] + [ "stroid::IO::ViewMesh", "namespacestroid_1_1_i_o.html#a6491a99d6d2859b2c098b94f2f8171d3", null ], + [ "stroid::IO::ViewMesh", "namespacestroid_1_1_i_o.html#a7bc6daa0f9ef8327355022363e1db3fb", null ], + [ "stroid::IO::VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a26155a525b34257a3eb2305e477b6bef", null ], + [ "stroid::IO::VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a516d260163e0b6ac000b301b0b8cf4bb", null ] ]; \ No newline at end of file diff --git a/docs/html/mesh_8h__dep__incl.map b/docs/html/mesh_8h__dep__incl.map index 7125699..b0499ec 100644 --- a/docs/html/mesh_8h__dep__incl.map +++ b/docs/html/mesh_8h__dep__incl.map @@ -1,5 +1,11 @@ - - - + + + + + + + + + diff --git a/docs/html/mesh_8h__dep__incl.md5 b/docs/html/mesh_8h__dep__incl.md5 index 25a3d37..3164488 100644 --- a/docs/html/mesh_8h__dep__incl.md5 +++ b/docs/html/mesh_8h__dep__incl.md5 @@ -1 +1 @@ -f9dd1f1f0ada45c031664e05baeddedf \ No newline at end of file +5829ce8728a6f5b491dd3d16a51c427e \ No newline at end of file diff --git a/docs/html/mesh_8h__dep__incl.svg b/docs/html/mesh_8h__dep__incl.svg index 7c9d524..937de65 100644 --- a/docs/html/mesh_8h__dep__incl.svg +++ b/docs/html/mesh_8h__dep__incl.svg @@ -1,11 +1,11 @@ - - + @@ -17,24 +17,25 @@ ]]> - + src/include/stroid/IO/mesh.h Node1 - -src/include/stroid -/IO/mesh.h + +src/include/stroid +/IO/mesh.h Node2 - - -src/lib/IO/mesh.cpp + + +src/include/stroid +/stroid.h @@ -42,8 +43,62 @@ Node1->Node2 - - + + + + + + + +Node4 + + +src/lib/IO/mesh.cpp + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +src/python/IO/bindings.cpp + + + + + +Node1->Node5 + + + + + + + + +Node3 + + +src/python/bindings.cpp + + + + + +Node2->Node3 + + + diff --git a/docs/html/mesh_8h__dep__incl_org.svg b/docs/html/mesh_8h__dep__incl_org.svg index dc8b185..0b9574a 100644 --- a/docs/html/mesh_8h__dep__incl_org.svg +++ b/docs/html/mesh_8h__dep__incl_org.svg @@ -1,29 +1,30 @@ - - - + + src/include/stroid/IO/mesh.h Node1 - -src/include/stroid -/IO/mesh.h + +src/include/stroid +/IO/mesh.h Node2 - - -src/lib/IO/mesh.cpp + + +src/include/stroid +/stroid.h @@ -31,8 +32,62 @@ Node1->Node2 - - + + + + + + + +Node4 + + +src/lib/IO/mesh.cpp + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +src/python/IO/bindings.cpp + + + + + +Node1->Node5 + + + + + + + + +Node3 + + +src/python/bindings.cpp + + + + + +Node2->Node3 + + + diff --git a/docs/html/mesh_8h__incl.map b/docs/html/mesh_8h__incl.map index e1680a4..bcd278f 100644 --- a/docs/html/mesh_8h__incl.map +++ b/docs/html/mesh_8h__incl.map @@ -1,7 +1,34 @@ - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/mesh_8h__incl.md5 b/docs/html/mesh_8h__incl.md5 index 98ab67d..9d0a1d4 100644 --- a/docs/html/mesh_8h__incl.md5 +++ b/docs/html/mesh_8h__incl.md5 @@ -1 +1 @@ -afe9d66dd2a249678e38f4e7d21fa29a \ No newline at end of file +2510757cb4a4bbfdbb3fee3f69185998 \ No newline at end of file diff --git a/docs/html/mesh_8h__incl.svg b/docs/html/mesh_8h__incl.svg index 1cf7f78..77bf712 100644 --- a/docs/html/mesh_8h__incl.svg +++ b/docs/html/mesh_8h__incl.svg @@ -1,13 +1,12 @@ - - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + src/include/stroid/IO/mesh.h Node1 - -src/include/stroid -/IO/mesh.h + +src/include/stroid +/IO/mesh.h @@ -33,8 +69,8 @@ Node2 - -string + +string @@ -42,8 +78,8 @@ Node1->Node2 - - + + @@ -51,8 +87,8 @@ Node3 - -mfem.hpp + +expected @@ -60,13 +96,277 @@ Node1->Node3 - - + + + + + + + +Node4 + + +istream + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +memory + + + + + +Node1->Node5 + + + + + + + + +Node6 + + +mfem.hpp + + + + + +Node1->Node6 + + + + + + + + +Node7 + + +stroid/utils/types.h + + + + + +Node1->Node7 + + + + + + + + +Node7->Node2 + + + + + + + + +Node7->Node3 + + + + + + + + +Node7->Node5 + + + + + + + + +Node7->Node6 + + + + + + + + +Node8 + + +stroid/config/config.h + + + + + +Node7->Node8 + + + + + + + + +Node13 + + +unordered_map + + + + + +Node7->Node13 + + + + + + + + +Node14 + + +variant + + + + + +Node7->Node14 + + + + + + + + +Node8->Node2 + + + + + + + + +Node9 + + +cstdint + + + + + +Node8->Node9 + + + + + + + + +Node10 + + +optional + + + + + +Node8->Node10 + + + + + + + + +Node11 + + +format + + + + + +Node8->Node11 + + + + + + + + +Node12 + + +sstream + + + + + +Node8->Node12 + + + + + + + + + + + + + + + + + + + + + Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -110,17 +110,20 @@ $(function(){initNavTree('mesh__utils_8cpp.html',''); initResizable(true); });
#include "stroid/utils/mesh_utils.h"
#include "mfem.hpp"
#include <print>
+#include "stroid/topology/curvilinear.h"
Include dependency graph for mesh_utils.cpp:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::utils
 Mesh inspection and validation utilities.
 
+ + + +

@@ -131,6 +134,10 @@ Functions

void stroid::utils::MarkFlippedBoundaryElements (mfem::Mesh &mesh)
 Mark boundary elements whose outward normal orientation is flipped.
 
void stroid::utils::ExportJacobianRadialProfile (mfem::Mesh &mesh, const std::string &filename)
 
std::unique_ptr< mfem::Mesh > stroid::utils::BuildProjected (const mfem::Mesh &reference, const fourdst::config::Config< config::MeshConfig > &cfg)
 
diff --git a/docs/html/mesh__utils_8cpp.js b/docs/html/mesh__utils_8cpp.js index 186562e..ed28038 100644 --- a/docs/html/mesh__utils_8cpp.js +++ b/docs/html/mesh__utils_8cpp.js @@ -1,5 +1,7 @@ var mesh__utils_8cpp = [ + [ "stroid::utils::BuildProjected", "namespacestroid_1_1utils.html#aa81cc28e65c9208a29a6aa9c51ba5126", null ], + [ "stroid::utils::ExportJacobianRadialProfile", "namespacestroid_1_1utils.html#ad6d849312ba094bda29ab3adf2326435", null ], [ "stroid::utils::MarkFlippedBoundaryElements", "namespacestroid_1_1utils.html#ae047d97d7d5dc12812395909d00f5bbe", null ], [ "stroid::utils::MarkFlippedElements", "namespacestroid_1_1utils.html#a22ab5809195bf85156607790f82b5e2d", null ] ]; \ No newline at end of file diff --git a/docs/html/mesh__utils_8cpp__incl.map b/docs/html/mesh__utils_8cpp__incl.map index 01b61b8..fd185c0 100644 --- a/docs/html/mesh__utils_8cpp__incl.map +++ b/docs/html/mesh__utils_8cpp__incl.map @@ -1,10 +1,42 @@ - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/mesh__utils_8cpp__incl.md5 b/docs/html/mesh__utils_8cpp__incl.md5 index 3f3f4cf..80bf544 100644 --- a/docs/html/mesh__utils_8cpp__incl.md5 +++ b/docs/html/mesh__utils_8cpp__incl.md5 @@ -1 +1 @@ -3355a8c256060a80ee8565f88e54695e \ No newline at end of file +f7231ddb4b0d9cab599c490ef9c0c904 \ No newline at end of file diff --git a/docs/html/mesh__utils_8cpp__incl.svg b/docs/html/mesh__utils_8cpp__incl.svg index 7dfb5a9..7581352 100644 --- a/docs/html/mesh__utils_8cpp__incl.svg +++ b/docs/html/mesh__utils_8cpp__incl.svg @@ -1,13 +1,12 @@ - - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + src/lib/utils/mesh_utils.cpp Node1 - -src/lib/utils/mesh -_utils.cpp + +src/lib/utils/mesh +_utils.cpp @@ -33,8 +69,8 @@ Node2 - -stroid/utils/mesh_utils.h + +stroid/utils/mesh_utils.h @@ -42,8 +78,8 @@ Node1->Node2 - - + + @@ -51,35 +87,53 @@ Node3 - -mfem.hpp + +mfem.hpp - + Node1->Node3 - - - + + + - - -Node4 - - -print + + +Node11 + + +print - - -Node1->Node4 - - - + + +Node1->Node11 + + + + + + + + +Node12 + + +stroid/topology/curvilinear.h + + + + + +Node1->Node12 + + + @@ -87,13 +141,304 @@ Node2->Node3 - - + + + + + + + +Node4 + + +stroid/config/config.h + + + + + +Node2->Node4 + + + + + + + + +Node10 + + +fourdst/config/config.h + + + + + +Node2->Node10 + + + + + + + + +Node5 + + +cstdint + + + + + +Node4->Node5 + + + + + + + + +Node6 + + +optional + + + + + +Node4->Node6 + + + + + + + + +Node7 + + +string + + + + + +Node4->Node7 + + + + + + + + +Node8 + + +format + + + + + +Node4->Node8 + + + + + + + + +Node9 + + +sstream + + + + + +Node4->Node9 + + + + + + + + +Node12->Node3 + + + + + + + + +Node12->Node4 + + + + + + + + +Node12->Node10 + + + + + + + + +Node13 + + +stroid/utils/types.h + + + + + +Node12->Node13 + + + + + + + + +Node13->Node3 + + + + + + + + +Node13->Node4 + + + + + + + + +Node13->Node7 + + + + + + + + +Node14 + + +memory + + + + + +Node13->Node14 + + + + + + + + +Node15 + + +expected + + + + + +Node13->Node15 + + + + + + + + +Node16 + + +unordered_map + + + + + +Node13->Node16 + + + + + + + + +Node17 + + +variant + + + + + +Node13->Node17 + + + + + + + + + + + + + + + + + + + + + Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -108,22 +108,26 @@ $(function(){initNavTree('mesh__utils_8h.html',''); initResizable(true); });
#include "mfem.hpp"
+#include "stroid/config/config.h"
+#include "fourdst/config/config.h"
Include dependency graph for mesh_utils.h:
-
+
This graph shows which files directly or indirectly include this file:
-
+
+ +

Namespaces

namespace  stroid
 Public API surface for the stroid mesh generation library.
 
namespace  stroid::utils
 Mesh inspection and validation utilities.
 
+ + + +

@@ -134,6 +138,10 @@ Functions

void stroid::utils::MarkFlippedBoundaryElements (mfem::Mesh &mesh)
 Mark boundary elements whose outward normal orientation is flipped.
 
void stroid::utils::ExportJacobianRadialProfile (mfem::Mesh &mesh, const std::string &filename)
 
std::unique_ptr< mfem::Mesh > stroid::utils::BuildProjected (const mfem::Mesh &reference, const fourdst::config::Config< config::MeshConfig > &cfg)
 
diff --git a/docs/html/mesh__utils_8h.js b/docs/html/mesh__utils_8h.js index 6798f3a..ad9b29f 100644 --- a/docs/html/mesh__utils_8h.js +++ b/docs/html/mesh__utils_8h.js @@ -1,5 +1,7 @@ var mesh__utils_8h = [ + [ "stroid::utils::BuildProjected", "namespacestroid_1_1utils.html#aa81cc28e65c9208a29a6aa9c51ba5126", null ], + [ "stroid::utils::ExportJacobianRadialProfile", "namespacestroid_1_1utils.html#ad6d849312ba094bda29ab3adf2326435", null ], [ "stroid::utils::MarkFlippedBoundaryElements", "namespacestroid_1_1utils.html#ae047d97d7d5dc12812395909d00f5bbe", null ], [ "stroid::utils::MarkFlippedElements", "namespacestroid_1_1utils.html#a22ab5809195bf85156607790f82b5e2d", null ] ]; \ No newline at end of file diff --git a/docs/html/mesh__utils_8h__dep__incl.map b/docs/html/mesh__utils_8h__dep__incl.map index 3d3268c..958fc3d 100644 --- a/docs/html/mesh__utils_8h__dep__incl.map +++ b/docs/html/mesh__utils_8h__dep__incl.map @@ -1,5 +1,13 @@ - - - + + + + + + + + + + + diff --git a/docs/html/mesh__utils_8h__dep__incl.md5 b/docs/html/mesh__utils_8h__dep__incl.md5 index 7f3510c..be71e69 100644 --- a/docs/html/mesh__utils_8h__dep__incl.md5 +++ b/docs/html/mesh__utils_8h__dep__incl.md5 @@ -1 +1 @@ -de670fa6b2670745aee89477f345c4fe \ No newline at end of file +5b02785045c4a578e29c4f2fdccb5e16 \ No newline at end of file diff --git a/docs/html/mesh__utils_8h__dep__incl.svg b/docs/html/mesh__utils_8h__dep__incl.svg index 0a4ab07..31a69ac 100644 --- a/docs/html/mesh__utils_8h__dep__incl.svg +++ b/docs/html/mesh__utils_8h__dep__incl.svg @@ -1,11 +1,11 @@ - - + @@ -17,25 +17,25 @@ ]]> - + src/include/stroid/utils/mesh_utils.h Node1 - -src/include/stroid -/utils/mesh_utils.h + +src/include/stroid +/utils/mesh_utils.h Node2 - - -src/lib/utils/mesh -_utils.cpp + + +src/include/stroid +/stroid.h @@ -43,8 +43,82 @@ Node1->Node2 - - + + + + + + + +Node4 + + +src/lib/refinement +/uniform.cpp + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +src/lib/utils/mesh +_utils.cpp + + + + + +Node1->Node5 + + + + + + + + +Node6 + + +src/python/utils/bindings.cpp + + + + + +Node1->Node6 + + + + + + + + +Node3 + + +src/python/bindings.cpp + + + + + +Node2->Node3 + + + diff --git a/docs/html/mesh__utils_8h__dep__incl_org.svg b/docs/html/mesh__utils_8h__dep__incl_org.svg index 4b6ab3f..19a50be 100644 --- a/docs/html/mesh__utils_8h__dep__incl_org.svg +++ b/docs/html/mesh__utils_8h__dep__incl_org.svg @@ -1,30 +1,30 @@ - - - + + src/include/stroid/utils/mesh_utils.h Node1 - -src/include/stroid -/utils/mesh_utils.h + +src/include/stroid +/utils/mesh_utils.h Node2 - - -src/lib/utils/mesh -_utils.cpp + + +src/include/stroid +/stroid.h @@ -32,8 +32,82 @@ Node1->Node2 - - + + + + + + + +Node4 + + +src/lib/refinement +/uniform.cpp + + + + + +Node1->Node4 + + + + + + + + +Node5 + + +src/lib/utils/mesh +_utils.cpp + + + + + +Node1->Node5 + + + + + + + + +Node6 + + +src/python/utils/bindings.cpp + + + + + +Node1->Node6 + + + + + + + + +Node3 + + +src/python/bindings.cpp + + + + + +Node2->Node3 + + + diff --git a/docs/html/mesh__utils_8h__incl.map b/docs/html/mesh__utils_8h__incl.map index 1c9072c..ab5fcf2 100644 --- a/docs/html/mesh__utils_8h__incl.map +++ b/docs/html/mesh__utils_8h__incl.map @@ -1,5 +1,19 @@ - - - + + + + + + + + + + + + + + + + + diff --git a/docs/html/mesh__utils_8h__incl.md5 b/docs/html/mesh__utils_8h__incl.md5 index 485602c..c4acdd5 100644 --- a/docs/html/mesh__utils_8h__incl.md5 +++ b/docs/html/mesh__utils_8h__incl.md5 @@ -1 +1 @@ -9b2d93b00a4338b84ba80d223a34ed2c \ No newline at end of file +93c2497072092c94a6d4ef789a7d4740 \ No newline at end of file diff --git a/docs/html/mesh__utils_8h__incl.svg b/docs/html/mesh__utils_8h__incl.svg index 77753d3..e1e2cfc 100644 --- a/docs/html/mesh__utils_8h__incl.svg +++ b/docs/html/mesh__utils_8h__incl.svg @@ -1,11 +1,11 @@ - - + @@ -17,15 +17,15 @@ ]]> - + src/include/stroid/utils/mesh_utils.h Node1 - -src/include/stroid -/utils/mesh_utils.h + +src/include/stroid +/utils/mesh_utils.h @@ -33,8 +33,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -42,8 +42,134 @@ Node1->Node2 - - + + + + + + + +Node3 + + +stroid/config/config.h + + + + + +Node1->Node3 + + + + + + + + +Node9 + + +fourdst/config/config.h + + + + + +Node1->Node9 + + + + + + + + +Node4 + + +cstdint + + + + + +Node3->Node4 + + + + + + + + +Node5 + + +optional + + + + + +Node3->Node5 + + + + + + + + +Node6 + + +string + + + + + +Node3->Node6 + + + + + + + + +Node7 + + +format + + + + + +Node3->Node7 + + + + + + + + +Node8 + + +sstream + + + + + +Node3->Node8 + + + diff --git a/docs/html/mesh__utils_8h__incl_org.svg b/docs/html/mesh__utils_8h__incl_org.svg index 94d93a8..eee6290 100644 --- a/docs/html/mesh__utils_8h__incl_org.svg +++ b/docs/html/mesh__utils_8h__incl_org.svg @@ -1,20 +1,20 @@ - - - + + src/include/stroid/utils/mesh_utils.h Node1 - -src/include/stroid -/utils/mesh_utils.h + +src/include/stroid +/utils/mesh_utils.h @@ -22,8 +22,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -31,8 +31,134 @@ Node1->Node2 - - + + + + + + + +Node3 + + +stroid/config/config.h + + + + + +Node1->Node3 + + + + + + + + +Node9 + + +fourdst/config/config.h + + + + + +Node1->Node9 + + + + + + + + +Node4 + + +cstdint + + + + + +Node3->Node4 + + + + + + + + +Node5 + + +optional + + + + + +Node3->Node5 + + + + + + + + +Node6 + + +string + + + + + +Node3->Node6 + + + + + + + + +Node7 + + +format + + + + + +Node3->Node7 + + + + + + + + +Node8 + + +sstream + + + + + +Node3->Node8 + + + diff --git a/docs/html/namespacemembers.html b/docs/html/namespacemembers.html index ad6733a..1313b8f 100644 --- a/docs/html/namespacemembers.html +++ b/docs/html/namespacemembers.html @@ -31,7 +31,7 @@
Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -101,22 +101,122 @@ $(function(){initNavTree('namespacemembers.html',''); initResizable(true); });
-
Here is a list of all namespace members with links to the namespace documentation for each member:
diff --git a/docs/html/namespacemembers_enum.html b/docs/html/namespacemembers_enum.html index c368897..16dce2a 100644 --- a/docs/html/namespacemembers_enum.html +++ b/docs/html/namespacemembers_enum.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -102,6 +102,8 @@ $(function(){initNavTree('namespacemembers_enum.html',''); initResizable(true);
Here is a list of all namespace enums with links to the namespace documentation for each enum:
diff --git a/docs/html/namespacemembers_func.html b/docs/html/namespacemembers_func.html index e13e3c7..ec6af37 100644 --- a/docs/html/namespacemembers_func.html +++ b/docs/html/namespacemembers_func.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -101,21 +101,104 @@ $(function(){initNavTree('namespacemembers_func.html',''); initResizable(true);
-
Here is a list of all namespace functions with links to the namespace documentation for each function:
diff --git a/docs/html/namespaces.html b/docs/html/namespaces.html index b5b39de..e82922b 100644 --- a/docs/html/namespaces.html +++ b/docs/html/namespaces.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -105,12 +105,16 @@ $(function(){initNavTree('namespaces.html',''); initResizable(true); });
Here is a list of all namespaces with brief descriptions:
-
[detail level 12]
- - - - - +
[detail level 123]
 ▼Nstroid
 Nconfig
 NIO
 Ntopology
 Nutils
+ + + + + + + + +
 ▼NstroidPublic API surface for the stroid mesh generation library
 NconfigConfiguration types and defaults for mesh generation
 Nexceptions
 NIOMesh serialization and visualization helpers
 Nrefinement
 Nstats
 NtopologyTopology construction and curvilinear mapping utilities
 ▼NutilsMesh inspection and validation utilities
 Nterm_support
diff --git a/docs/html/namespacestroid.html b/docs/html/namespacestroid.html index 74ff0b6..9aa9a13 100644 --- a/docs/html/namespacestroid.html +++ b/docs/html/namespacestroid.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -102,22 +102,419 @@ $(function(){initNavTree('namespacestroid.html',''); initResizable(true); });
-Namespaces
+Namespaces | +Classes | +Enumerations | +Functions | +Variables
stroid Namespace Reference
+ +

Public API surface for the stroid mesh generation library. +More...

+ + + + + + + + + + +

Namespaces

namespace  config
 Configuration types and defaults for mesh generation.
 
namespace  exceptions
 
namespace  IO
 Mesh serialization and visualization helpers.
 
namespace  refinement
 
namespace  stats
 
namespace  topology
 Topology construction and curvilinear mapping utilities.
 
namespace  utils
 Mesh inspection and validation utilities.
 
+ + + + + +

+Classes

struct  ScalarMeshField
 
struct  StroidMesh
 
+ + + +

+Enumerations

enum class  MFEM_MESH_TYPE { SERIAL +, PARALLEL + }
 
+ + + + + + + +

+Functions

StroidMesh GenerateMesh (const fourdst::config::Config< stroid::config::MeshConfig > &input)
 
StroidMesh GenerateMesh (const stroid::config::MeshConfig &config)
 
StroidMesh GenerateMesh (const std::string &filename)
 
+ + + + + + + + + + + + + + + + + + +

+Variables

list __all__ = ['config', 'exceptions', 'IO', 'refinement', 'stats', 'GenerateMesh', 'StroidMesh']
 
 _meta = importlib.metadata.metadata('stroid')
 
 __version__ = _meta['Version']
 
 __license__ = _meta['License']
 
 __description__ = _meta['Summary']
 
str __author__ = 'Emily M. Boudreaux'
 
str __url__ = 'https://github.com/4D-STAR/stroid'
 
str __email__ = 'emily.boudreaux@dartmouth.edu'
 
 _PACKAGE_DIR = Path(__file__).resolve().parent
 
+

Detailed Description

+

Public API surface for the stroid mesh generation library.

+

This namespace aggregates configuration, topology construction, mapping, and mesh utilities for building curvilinear multi-block meshes.

+
Example: build a mesh programmatically
#include <memory>
+
#include "mfem.hpp"
+
#include "fourdst/config/config.h"
+
#include "stroid/stroid.h"
+
+
int main() {
+
fourdst::config::Config<stroid::config::MeshConfig> cfg;
+
auto mesh = stroid::topology::BuildSkeleton(cfg);
+
stroid::topology::Finalize(*mesh, cfg);
+
stroid::topology::PromoteToHighOrder(*mesh, cfg);
+
stroid::topology::ProjectMesh(*mesh, cfg);
+
stroid::IO::SaveVTU(*mesh, "stroid");
+
}
+
stroid::IO::SaveVTU
void SaveVTU(mfem::Mesh &mesh, const std::string &exportName)
Save a mesh as a ParaView VTU dataset.
Definition mesh.cpp:710
+
stroid::topology::PromoteToHighOrder
void PromoteToHighOrder(mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
Promote a mesh to high-order by attaching an H1 nodal finite element space.
Definition curvilinear.cpp:43
+
stroid::topology::Finalize
void Finalize(mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
Finalize topology, validate orientation, and apply the configured refinement policy.
Definition topology.cpp:234
+
stroid::topology::ProjectMesh
void ProjectMesh(mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
Project high-order mesh nodes using the configured curvilinear mapping.
Definition curvilinear.cpp:47
+
stroid::topology::BuildSkeleton
std::unique_ptr< mfem::Mesh > BuildSkeleton(const fourdst::config::Config< config::MeshConfig > &config)
Build the initial multi-block mesh topology for the star model.
Definition topology.cpp:114
+ +
+
Example: tweak config then visualize
fourdst::config::Config<stroid::config::MeshConfig> cfg;
+
cfg->order = 4;
+
cfg->flattening = 0.1;
+
auto mesh = stroid::topology::BuildSkeleton(cfg);
+
stroid::topology::Finalize(*mesh, cfg);
+
stroid::topology::PromoteToHighOrder(*mesh, cfg);
+
stroid::topology::ProjectMesh(*mesh, cfg);
+
stroid::IO::ViewMesh(*mesh, "Stroid Mesh", stroid::IO::VISUALIZATION_MODE::ELEMENT_ID, "localhost", 19916);
+
stroid::IO::ViewMesh
void ViewMesh(mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
Stream a mesh to a running GLVis server for interactive viewing.
Definition mesh.cpp:727
+
stroid::IO::VISUALIZATION_MODE::ELEMENT_ID
@ ELEMENT_ID
Color elements by their element attribute/ID.
Definition mesh.h:19
+
+

Enumeration Type Documentation

+ +

◆ MFEM_MESH_TYPE

+ +
+
+ + + + + +
+ + + + +
enum class stroid::MFEM_MESH_TYPE
+ 		+strong
+
+ + + +
Enumerator
SERIAL 
PARALLEL 
+ +
+
+

Function Documentation

+ +

◆ GenerateMesh() [1/3]

+ +
+
+ + + + + +
+ + + + + + + +
StroidMesh stroid::GenerateMesh (const fourdst::config::Config< stroid::config::MeshConfig > & input)
+ 		+inline
+
+ +
+
+ +

◆ GenerateMesh() [2/3]

+ +
+
+ + + + + +
+ + + + + + + +
StroidMesh stroid::GenerateMesh (const std::string & filename)
+ 		+inline
+
+ +
+
+ +

◆ GenerateMesh() [3/3]

+ +
+
+ + + + + +
+ + + + + + + +
StroidMesh stroid::GenerateMesh (const stroid::config::MeshConfig & config)
+ 		+inline
+
+ +
+
+

Variable Documentation

+ +

◆ __all__

+ +
+
+ + + + + +
+ + + + +
list stroid.__all__ = ['config', 'exceptions', 'IO', 'refinement', 'stats', 'GenerateMesh', 'StroidMesh']
+ 		+private
+
+ +
+
+ +

◆ __author__

+ +
+
+ + + + + +
+ + + + +
str stroid.__author__ = 'Emily M. Boudreaux'
+ 		+private
+
+ +
+
+ +

◆ __description__

+ +
+
+ + + + + +
+ + + + +
stroid.__description__ = _meta['Summary']
+ 		+private
+
+ +
+
+ +

◆ __email__

+ +
+
+ + + + + +
+ + + + +
str stroid.__email__ = 'emily.boudreaux@dartmouth.edu'
+ 		+private
+
+ +
+
+ +

◆ __license__

+ +
+
+ + + + + +
+ + + + +
str stroid.__license__ = _meta['License']
+ 		+private
+
+ +
+
+ +

◆ __url__

+ +
+
+ + + + + +
+ + + + +
str stroid.__url__ = 'https://github.com/4D-STAR/stroid'
+ 		+private
+
+ +
+
+ +

◆ __version__

+ +
+
+ + + + + +
+ + + + +
str stroid.__version__ = _meta['Version']
+ 		+private
+
+ +
+
+ +

◆ _meta

+ +
+
+ + + + + +
+ + + + +
stroid._meta = importlib.metadata.metadata('stroid')
+ 		+protected
+
+ +
+
+ +

◆ _PACKAGE_DIR

+ +
+
+ + + + + +
+ + + + +
stroid._PACKAGE_DIR = Path(__file__).resolve().parent
+ 		+protected
+
+ +
+
diff --git a/docs/html/namespacestroid.js b/docs/html/namespacestroid.js index c3af8c5..aa85cc8 100644 --- a/docs/html/namespacestroid.js +++ b/docs/html/namespacestroid.js @@ -1,29 +1,48 @@ var namespacestroid = [ [ "config", "namespacestroid_1_1config.html", "namespacestroid_1_1config" ], + [ "exceptions", "namespacestroid_1_1exceptions.html", "namespacestroid_1_1exceptions" ], [ "IO", "namespacestroid_1_1_i_o.html", [ [ "VISUALIZATION_MODE", "namespacestroid_1_1_i_o.html#ad4048304d8a0c7075d2b2a6e465d0b6e", [ [ "NONE", "namespacestroid_1_1_i_o.html#ad4048304d8a0c7075d2b2a6e465d0b6eab50339a10e1de285ac99d4c3990b8693", null ], [ "ELEMENT_ID", "namespacestroid_1_1_i_o.html#ad4048304d8a0c7075d2b2a6e465d0b6eac31a2fe3e97d218a154c1947b43d6bbf", null ], [ "BOUNDARY_ELEMENT_ID", "namespacestroid_1_1_i_o.html#ad4048304d8a0c7075d2b2a6e465d0b6eaee96e14c2b71bd59252006289ba464cf", null ] ] ], + [ "LoadStroidMesh", "namespacestroid_1_1_i_o.html#a3f39dc149d5650468b579c76d00f991d", null ], + [ "MakeConformingVisualizationMesh", "namespacestroid_1_1_i_o.html#a7426b1e664be45cbf791167748d4feb8", null ], + [ "ParseStroidMesh", "namespacestroid_1_1_i_o.html#a20ae517986b9c27d23ef5f0ab704b247", null ], [ "SaveMesh", "namespacestroid_1_1_i_o.html#aeb567ddc70ff2d064c139dee87575830", null ], + [ "SaveMesh", "namespacestroid_1_1_i_o.html#ad7721ff3eda0ad42365955ea33da2b0a", null ], + [ "SaveStroidMesh", "namespacestroid_1_1_i_o.html#ab854167b428c1a77597d9bb3a972b363", null ], + [ "SaveVTU", "namespacestroid_1_1_i_o.html#ae0fc8e0663da26ff11be71fb1b5a0b0e", null ], [ "SaveVTU", "namespacestroid_1_1_i_o.html#ab4c8bda7ab370e34376a7832fbf0951e", null ], - [ "ViewMesh", "namespacestroid_1_1_i_o.html#a496f5c16eaffda5922a0b96c1f525dab", null ], - [ "VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a8100e130b3a49fdee48bc3c4d4e63963", null ] + [ "ViewMesh", "namespacestroid_1_1_i_o.html#a6491a99d6d2859b2c098b94f2f8171d3", null ], + [ "ViewMesh", "namespacestroid_1_1_i_o.html#a7bc6daa0f9ef8327355022363e1db3fb", null ], + [ "VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a26155a525b34257a3eb2305e477b6bef", null ], + [ "VisualizeFaceValence", "namespacestroid_1_1_i_o.html#a516d260163e0b6ac000b301b0b8cf4bb", null ] ] ], - [ "topology", "namespacestroid_1_1topology.html", [ - [ "ApplyEquiangular", "namespacestroid_1_1topology.html#a03f0b29ccf7d427a175de9ff75824b7c", null ], - [ "ApplyKelvin", "namespacestroid_1_1topology.html#a59c54a10f726d323f8506b4a2edd7467", null ], - [ "ApplySpheroidal", "namespacestroid_1_1topology.html#a7fbf58c40c03bc751d53f4a3273744fc", null ], - [ "BuildSkeleton", "namespacestroid_1_1topology.html#abc0d8a1fb8e9c5ac0e259e4c93db7892", null ], - [ "Finalize", "namespacestroid_1_1topology.html#a62774bcba7ea1a485892dcd4bed6425b", null ], - [ "ProjectMesh", "namespacestroid_1_1topology.html#a836ed13e5bac63e7952c3ce4e5532e78", null ], - [ "PromoteToHighOrder", "namespacestroid_1_1topology.html#a5907aa2e639cda703d48d177abc37caf", null ], - [ "TransformPoint", "namespacestroid_1_1topology.html#a394e33bdfafdaccd6edfaae0642d3456", null ] + [ "refinement", "namespacestroid_1_1refinement.html", [ + [ "UniformRefinement", "namespacestroid_1_1refinement.html#a1f203a99bc3096f62f7584fd4c19122c", null ] ] ], - [ "utils", "namespacestroid_1_1utils.html", [ - [ "MarkFlippedBoundaryElements", "namespacestroid_1_1utils.html#ae047d97d7d5dc12812395909d00f5bbe", null ], - [ "MarkFlippedElements", "namespacestroid_1_1utils.html#a22ab5809195bf85156607790f82b5e2d", null ] - ] ] + [ "stats", "namespacestroid_1_1stats.html", "namespacestroid_1_1stats" ], + [ "topology", "namespacestroid_1_1topology.html", "namespacestroid_1_1topology" ], + [ "utils", "namespacestroid_1_1utils.html", "namespacestroid_1_1utils" ], + [ "ScalarMeshField", "structstroid_1_1_scalar_mesh_field.html", "structstroid_1_1_scalar_mesh_field" ], + [ "StroidMesh", "structstroid_1_1_stroid_mesh.html", "structstroid_1_1_stroid_mesh" ], + [ "MFEM_MESH_TYPE", "namespacestroid.html#a90f6d065df7b5224bbfc04c6d89c467e", [ + [ "SERIAL", "namespacestroid.html#a90f6d065df7b5224bbfc04c6d89c467ea7b804a28d6154ab8007287532037f1d0", null ], + [ "PARALLEL", "namespacestroid.html#a90f6d065df7b5224bbfc04c6d89c467eadf13a99b035d6f0bce4f44ab18eec8eb", null ] + ] ], + [ "GenerateMesh", "namespacestroid.html#a009af3074e8681e87067228deab670d6", null ], + [ "GenerateMesh", "namespacestroid.html#ae9643927d87d14a87970569dd0d8f3ae", null ], + [ "GenerateMesh", "namespacestroid.html#a2e8a90a2a7e9606de8b07cf330c0fd8d", null ], + [ "__all__", "namespacestroid.html#af6ce344ae299e3ad50f4ad30f3e98fb4", null ], + [ "__author__", "namespacestroid.html#a0980d815006142018342badd4a344b75", null ], + [ "__description__", "namespacestroid.html#a46eadd157b4003bbf1df5f46df72ecf6", null ], + [ "__email__", "namespacestroid.html#a7aa709789d28ac6d51079f35b030fb7b", null ], + [ "__license__", "namespacestroid.html#a66665c450e6087c6d5d85fe337229886", null ], + [ "__url__", "namespacestroid.html#a82f32fe152e5f48927bba40b0131c047", null ], + [ "__version__", "namespacestroid.html#a6c6c3bffa4c5eaa2cbfa16072a66ec85", null ], + [ "_meta", "namespacestroid.html#a7515d5089908807b72e300799c8e6d8a", null ], + [ "_PACKAGE_DIR", "namespacestroid.html#a6c93a0ee650df592ef5c32c3e6b110e0", null ] ]; \ No newline at end of file diff --git a/docs/html/namespacestroid_1_1_i_o.html b/docs/html/namespacestroid_1_1_i_o.html index 8d1a8ff..b4540e0 100644 --- a/docs/html/namespacestroid_1_1_i_o.html +++ b/docs/html/namespacestroid_1_1_i_o.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -107,6 +107,9 @@ $(function(){initNavTree('namespacestroid_1_1_i_o.html',''); initResizable(true)
stroid::IO Namespace Reference
+ +

Mesh serialization and visualization helpers. +More...

@@ -119,20 +122,41 @@ Enumerations

Enumerations

+ + + + + - - - - - - + + + + + + + + + + + + + + + + + + + +

Functions

void SaveStroidMesh (const StroidMesh &mesh, const std::string &filename, const std::string &comment="")
 
void SaveMesh (const mfem::Mesh &mesh, const std::string &filename)
 Save a mesh to MFEM's native .mesh format.
 
void SaveMesh (const stroid::StroidMesh &mesh, const std::string &filename)
 Overload of SaveMesh which accepts a StroidMesh type and will internally unpack it.
 
void SaveVTU (mfem::Mesh &mesh, const std::string &exportName)
 Save a mesh as a ParaView VTU dataset.
 
void ViewMesh (mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport)
 Stream a mesh to a running GLVis server for interactive viewing.
 
void VisualizeFaceValence (mfem::Mesh &mesh)
 Visualize boundary face valence (1=surface, 2=internal).
 
void SaveVTU (const stroid::StroidMesh &mesh, const std::string &exportName)
 Overload of SaveVTU which accepts a StroidMesh type and will internally unpack it.
 
std::unique_ptr< mfem::Mesh > MakeConformingVisualizationMesh (const mfem::Mesh &mesh)
 Make a display-only mesh copy with matching face subdivisions. This is purely for visualization and should not be used for any science goals.
 
void ViewMesh (mfem::Mesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
 Stream a mesh to a running GLVis server for interactive viewing.
 
void ViewMesh (const stroid::StroidMesh &mesh, const std::string &title, VISUALIZATION_MODE mode, const std::string &vishost, int visport, bool conforming_display=true)
 
void VisualizeFaceValence (mfem::Mesh &mesh, const std::string &vishost, int visport, bool conforming_display=true)
 Color boundary-adjacent elements by face valence (1=surface, 2=internal). Untagged elements are zero; elements touching several tagged faces use the maximum valence. Values are computed before display subdivision.
 
void VisualizeFaceValence (const stroid::StroidMesh &mesh, const std::string &vishost, int visport, bool conforming_display=true)
 
std::expected< StroidMesh, std::string > ParseStroidMesh (std::istream &is)
 
std::expected< StroidMesh, std::string > LoadStroidMesh (const std::string &filename)
 
-

Enumeration Type Documentation

+

Detailed Description

+

Mesh serialization and visualization helpers.

+

Enumeration Type Documentation

◆ VISUALIZATION_MODE

@@ -166,8 +190,68 @@ Functions

Function Documentation

+ +

◆ LoadStroidMesh()

+ +
+
+ + + + + + + +
std::expected< StroidMesh, std::string > stroid::IO::LoadStroidMesh (const std::string & filename)
+
+ +
+
+ +

◆ MakeConformingVisualizationMesh()

+ +
+
+ + + + + + + +
std::unique_ptr< mfem::Mesh > stroid::IO::MakeConformingVisualizationMesh (const mfem::Mesh & mesh)
+
+ +

Make a display-only mesh copy with matching face subdivisions. This is purely for visualization and should not be used for any science goals.

+
Parameters
+ + +
meshSource mesh whose geometry is to be displayed.
+
+
+
Returns
Independently owned copy with no hanging faces.
+ +
+
+ +

◆ ParseStroidMesh()

+ +
+
+ + + + + + + +
std::expected< StroidMesh, std::string > stroid::IO::ParseStroidMesh (std::istream & is)
+
+ +
+
-

◆ SaveMesh()

+

◆ SaveMesh() [1/2]

@@ -194,10 +278,98 @@ Functions +
+
+ +

◆ SaveMesh() [2/2]

+ +
+
+ + + + + + + + + + + +
void stroid::IO::SaveMesh (const stroid::StroidMesh & mesh,
const std::string & filename )
+
+ +

Overload of SaveMesh which accepts a StroidMesh type and will internally unpack it.

+
Parameters
+ + + +
meshStroidMesh to serialize.
filenamePath to save to
+
+
+
Note
This function is a utility wrapper to save a StroidMesh object in MFEM's native .mesh format. Data other than the mesh pointer in StroidMesh will not be saved (e.g. the reference mesh, the number of refinement levels, etc..). If you need to serialize an entire StroidMesh then please use the stroid::IO::SaveStroidMesh function
+ +
+
+ +

◆ SaveStroidMesh()

+ +
+
+ + + + + + + + + + + + + + + + +
void stroid::IO::SaveStroidMesh (const StroidMesh & mesh,
const std::string & filename,
const std::string & comment = "" )
+
+ +
+
+ +

◆ SaveVTU() [1/2]

+ +
+
+ + + + + + + + + + + +
void stroid::IO::SaveVTU (const stroid::StroidMesh & mesh,
const std::string & exportName )
+
+ +

Overload of SaveVTU which accepts a StroidMesh type and will internally unpack it.

+
Parameters
+ + + +
meshStroidMesh to serialize.
filenamePath to save to
+
+
+
Note
This function is a utility wrapper to save a StroidMesh object in MFEM's native .mesh format. Data other than the mesh pointer in StroidMesh will not be saved (e.g. the reference mesh, the number of refinement levels, etc..). If you need to serialize an entire StroidMesh then please use the stroid::IO::SaveStroidVTU function
+
-

◆ SaveVTU()

+

◆ SaveVTU() [2/2]

@@ -226,8 +398,49 @@ Functions
- -

◆ ViewMesh()

+ +

◆ ViewMesh() [1/2]

+ +
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
void stroid::IO::ViewMesh (const stroid::StroidMesh & mesh,
const std::string & title,
VISUALIZATION_MODE mode,
const std::string & vishost,
int visport,
bool conforming_display = true )
+
+ +
+
+ +

◆ ViewMesh() [2/2]

@@ -255,7 +468,12 @@ Functions - int visport ) + int visport, + + + + + bool conforming_display = true )
@@ -268,14 +486,15 @@ Functions modeAttribute visualization mode. vishostGLVis server host. visportGLVis server port. + conforming_displayRefine a display-only copy at hanging interfaces to prevent GLVis tessellation gaps. Set false to inspect the original element layout, which can show rendering gaps on curved interfaces.
- -

◆ VisualizeFaceValence()

+ +

◆ VisualizeFaceValence() [1/2]

@@ -283,16 +502,64 @@ Functions void stroid::IO::VisualizeFaceValence ( - mfem::Mesh & mesh) + const stroid::StroidMesh & mesh, + + + + const std::string & vishost, + + + + + int visport, + + + + + bool conforming_display = true )
-

Visualize boundary face valence (1=surface, 2=internal).

+
+
+ +

◆ VisualizeFaceValence() [2/2]

+ +
+
+ + + + + + + + + + + + + + + + + + + + + +
void stroid::IO::VisualizeFaceValence (mfem::Mesh & mesh,
const std::string & vishost,
int visport,
bool conforming_display = true )
+
+ +

Color boundary-adjacent elements by face valence (1=surface, 2=internal). Untagged elements are zero; elements touching several tagged faces use the maximum valence. Values are computed before display subdivision.

Parameters
+ + +
meshMesh whose boundary faces are inspected.
vishostGLVis server host.
visportGLVis server port.
conforming_displayUse the same display-only refinement as ViewMesh.
diff --git a/docs/html/namespacestroid_1_1config.html b/docs/html/namespacestroid_1_1config.html index 580b4f9..834599c 100644 --- a/docs/html/namespacestroid_1_1config.html +++ b/docs/html/namespacestroid_1_1config.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -102,17 +102,86 @@ $(function(){initNavTree('namespacestroid_1_1config.html',''); initResizable(tru
-Classes
+Classes | +Functions
stroid::config Namespace Reference
+ +

Configuration types and defaults for mesh generation. +More...

+ + +

Classes

struct  MeshConfig
 Configuration parameters for stroid mesh generation. More...
 
struct  OptimizationMethods
 
+ + + + + +

+Functions

MeshConfig ResolveDefaults (const MeshConfig &mesh_config)
 Fill omitted configuration values.
 
std::string to_string (const MeshConfig &mesh_config)
 
+

Detailed Description

+

Configuration types and defaults for mesh generation.

+

Function Documentation

+ +

◆ ResolveDefaults()

+ +
+
+ + + + + +
+ + + + + + + +
MeshConfig stroid::config::ResolveDefaults (const MeshConfig & mesh_config)
+ 		+inline
+
+ +

Fill omitted configuration values.

+ +
+
+ +

◆ to_string()

+ +
+
+ + + + + +
+ + + + + + + +
std::string stroid::config::to_string (const MeshConfig & mesh_config)
+ 		+inline
+
+ +
+
diff --git a/docs/html/namespacestroid_1_1config.js b/docs/html/namespacestroid_1_1config.js index edb6deb..381fd80 100644 --- a/docs/html/namespacestroid_1_1config.js +++ b/docs/html/namespacestroid_1_1config.js @@ -1,4 +1,7 @@ var namespacestroid_1_1config = [ - [ "MeshConfig", "structstroid_1_1config_1_1_mesh_config.html", "structstroid_1_1config_1_1_mesh_config" ] + [ "MeshConfig", "structstroid_1_1config_1_1_mesh_config.html", "structstroid_1_1config_1_1_mesh_config" ], + [ "OptimizationMethods", "structstroid_1_1config_1_1_optimization_methods.html", "structstroid_1_1config_1_1_optimization_methods" ], + [ "ResolveDefaults", "namespacestroid_1_1config.html#a84d2f4618367487820ac818c3c47a39a", null ], + [ "to_string", "namespacestroid_1_1config.html#a4f2409cb05fd572794c115d850502d61", null ] ]; \ No newline at end of file diff --git a/docs/html/namespacestroid_1_1topology.html b/docs/html/namespacestroid_1_1topology.html index fa5012e..76f4670 100644 --- a/docs/html/namespacestroid_1_1topology.html +++ b/docs/html/namespacestroid_1_1topology.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -102,11 +102,20 @@ $(function(){initNavTree('namespacestroid_1_1topology.html',''); initResizable(t
+Classes | Functions
stroid::topology Namespace Reference
+ +

Topology construction and curvilinear mapping utilities. +More...

+ + + +

+Classes

class  TMOPProgressBar
 
@@ -115,6 +124,9 @@ Functions + + + @@ -127,14 +139,23 @@ Functions + + + + + + + - +

Functions

void PromoteToHighOrder (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
void ProjectMesh (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
 Project high-order mesh nodes using the configured curvilinear mapping.
 
std::unique_ptr< ScalarMeshField > BuildExteriorCoordinate (mfem::Mesh &mesh, mfem::Mesh &reference_mesh, const fourdst::config::Config< config::MeshConfig > &config)
 Build a scalar grid function representing the compactification coordinate for a mesh. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.
 
void ApplyEquiangular (mfem::Vector &pos)
 Apply an equiangular (gnomonic) projection to a point on a cube.
 
void TransformPoint (mfem::Vector &pos, const fourdst::config::Config< config::MeshConfig > &config, int attribute_id)
 Map a point from the initial block topology to the curvilinear domain.
 
double ComputeExteriorCoordinate (const mfem::Vector &logical_position, int attribute, const fourdst::config::Config< config::MeshConfig > &config)
 Compute the compactification coordinate for a point in the curvilinear domain. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.
 
void ApplyTMOP (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
 
void OptimizeMesh (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &cfg)
 
std::unique_ptr< mfem::Mesh > BuildSkeleton (const fourdst::config::Config< config::MeshConfig > &config)
 Build the initial multi-block mesh topology for the star model.
 
void Finalize (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
 Finalize topology, validate orientation, and apply uniform refinement.
 Finalize topology, validate orientation, and apply the configured refinement policy.
 
-

Function Documentation

+

Detailed Description

+

Topology construction and curvilinear mapping utilities.

+

Function Documentation

◆ ApplyEquiangular()

@@ -218,6 +239,65 @@ Functions +
+
+ +

◆ ApplyTMOP()

+ +
+
+ + + + + + + + + + + +
void stroid::topology::ApplyTMOP (mfem::Mesh & mesh,
const fourdst::config::Config< config::MeshConfig > & config )
+
+

@breif Apply target matrix optimization to improve conditioning of the mesh

+ +
+
+ +

◆ BuildExteriorCoordinate()

+ +
+
+ + + + + + + + + + + + + + + + +
std::unique_ptr< ScalarMeshField > stroid::topology::BuildExteriorCoordinate (mfem::Mesh & mesh,
mfem::Mesh & reference_mesh,
const fourdst::config::Config< config::MeshConfig > & config )
+
+ +

Build a scalar grid function representing the compactification coordinate for a mesh. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.

+
Parameters
+ + + + +
meshReference to the underlying serial MFEM mesh which has been promoted to high-order and projected into the curvilinear domain.
reference_meshreference to the underlying serial which has not been promoted to high-order or projected into the curvilinear domain. This is used to compute the compactification coordinate.
configConfig file
+
+
+
Returns
Unique pointer to a scalar mesh field representing the compactification coordinate.
+
@@ -238,12 +318,49 @@ Functions

Build the initial multi-block mesh topology for the star model.

Parameters
- +
configMesh configuration (uses radii and domain flags).
configMesh configuration (uses radii, domain flags, and core_mapping). The legacy spherified core uses one block; multi_block uses an inner Cartesian block and six core transition blocks.
Returns
Newly allocated mesh skeleton (not yet refined or curved).
+
+ + +

◆ ComputeExteriorCoordinate()

+ +
+
+ + + + + + + + + + + + + + + + +
double stroid::topology::ComputeExteriorCoordinate (const mfem::Vector & logical_position,
int attribute,
const fourdst::config::Config< config::MeshConfig > & config )
+
+ +

Compute the compactification coordinate for a point in the curvilinear domain. This ranges from 0-1 with 0 at the stellar surface and 1 at the compactified infinity.

+
Parameters
+ + + + +
logical_positionLogical position of the point in the curvilinear domain.
attributeElement attribute ID (used to determine the exterior coordinate).
configMesh configuration (uses radii and flattening).
+
+
+
Returns
Compactification coordinate ranging from 0 (stellar surface) to 1 (compactified infinity).
+
@@ -265,15 +382,37 @@ Functions
-

Finalize topology, validate orientation, and apply uniform refinement.

+

Finalize topology, validate orientation, and apply the configured refinement policy.

Parameters
- +
meshMesh to finalize in-place.
configMesh configuration (uses refinement_levels).
configMesh configuration. Vacuum refinement overrides enable a balanced hierarchy with fine layers at both vacuum boundaries and a conforming stellar interface. Without overrides, refinement is uniform.
+
+ + +

◆ OptimizeMesh()

+ +
+
+ + + + + + + + + + + +
void stroid::topology::OptimizeMesh (mfem::Mesh & mesh,
const fourdst::config::Config< config::MeshConfig > & cfg )
+
+

@breif Helper to call TMOP if the correct flags are set

+
@@ -364,7 +503,7 @@ Functions
Parameters
- +
posPosition vector updated in-place.
configMesh configuration (uses radii, flattening, instability radius, and core steepness).
configMesh configuration (uses radii, flattening, and core_mapping). The multi_block strategy requires the matching skeleton from BuildSkeleton; changing only the mapping on a legacy core element is not supported.
attribute_idElement attribute ID (currently unused).
diff --git a/docs/html/namespacestroid_1_1utils.html b/docs/html/namespacestroid_1_1utils.html index 25e8ff3..9032408 100644 --- a/docs/html/namespacestroid_1_1utils.html +++ b/docs/html/namespacestroid_1_1utils.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -102,11 +102,20 @@ $(function(){initNavTree('namespacestroid_1_1utils.html',''); initResizable(true
+Namespaces | Functions
stroid::utils Namespace Reference
+ +

Mesh inspection and validation utilities. +More...

+ + + +

+Namespaces

namespace  term_support
 
@@ -115,8 +124,56 @@ Functions + + + +

Functions

void MarkFlippedElements (mfem::Mesh &mesh)
void MarkFlippedBoundaryElements (mfem::Mesh &mesh)
 Mark boundary elements whose outward normal orientation is flipped.
 
void ExportJacobianRadialProfile (mfem::Mesh &mesh, const std::string &filename)
 
std::unique_ptr< mfem::Mesh > BuildProjected (const mfem::Mesh &reference, const fourdst::config::Config< config::MeshConfig > &cfg)
 
-

Function Documentation

+

Detailed Description

+

Mesh inspection and validation utilities.

+

Function Documentation

+ +

◆ BuildProjected()

+ +
+
+ + + + + + + + + + + +
std::unique_ptr< mfem::Mesh > stroid::utils::BuildProjected (const mfem::Mesh & reference,
const fourdst::config::Config< config::MeshConfig > & cfg )
+
+ +
+
+ +

◆ ExportJacobianRadialProfile()

+ +
+
+ + + + + + + + + + + +
void stroid::utils::ExportJacobianRadialProfile (mfem::Mesh & mesh,
const std::string & filename )
+
+ +
+

◆ MarkFlippedBoundaryElements()

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['conformity_5',['conformity',['../structstroid_1_1stats_1_1_mesh_stats.html#ad13cc0c6a5b223ace653825355660bdd',1,'stroid::stats::MeshStats']]], + ['continuity_5forder_6',['continuity_order',['../structstroid_1_1config_1_1_mesh_config.html#ae8bf54f7fd649578d44e46e96f501e34',1,'stroid::config::MeshConfig']]], + ['core_7',['core',['../structstroid_1_1stats_1_1_refinement_stats.html#aa1bd1a7c712813ab7913defe74bc9e13',1,'stroid::stats::RefinementStats::core'],['../structstroid_1_1stats_1_1_element_counts.html#adf8ca94d0323409da0a8e6dd7a09b43d',1,'stroid::stats::ElementCounts::core'],['../structstroid_1_1stats_1_1_bounding_box_stats.html#ae3dcc95d73affc02d81e91f6dcbd5757',1,'stroid::stats::BoundingBoxStats::core']]], + ['core_5fid_8',['core_id',['../structstroid_1_1config_1_1_mesh_config.html#ad6af127dd2bdcba58dd64eee24378dbe',1,'stroid::config::MeshConfig']]], + ['core_5fmapping_9',['core_mapping',['../structstroid_1_1config_1_1_mesh_config.html#a932e1257cacf5831c216bc3c48d4346d',1,'stroid::config::MeshConfig']]], + ['core_5fsteepness_10',['core_steepness',['../structstroid_1_1config_1_1_mesh_config.html#aae33c48f949858944a6baa6033cebb7b',1,'stroid::config::MeshConfig']]] ]; diff --git a/docs/html/search/variables_4.js b/docs/html/search/variables_4.js index 54e4e33..73bf964 100644 --- a/docs/html/search/variables_4.js +++ b/docs/html/search/variables_4.js @@ -1,4 +1,7 @@ var searchData= [ - ['order_0',['order',['../structstroid_1_1config_1_1_mesh_config.html#a860e78f1906acb0c3aa08d55f94de3fd',1,'stroid::config::MeshConfig']]] + ['detj_5fmax_0',['detJ_max',['../structstroid_1_1stats_1_1_jacobian_stats.html#a111e61403f15558c3f18047480851996',1,'stroid::stats::JacobianStats']]], + ['detj_5fmin_1',['detJ_min',['../structstroid_1_1stats_1_1_jacobian_stats.html#a01d0af968bea5acf49ab33ae7120d500',1,'stroid::stats::JacobianStats']]], + ['detj_5fmin_5fat_5fradius_2',['detJ_min_at_radius',['../structstroid_1_1stats_1_1_jacobian_stats.html#ae2e42851b5c866819eadbd761c94248f',1,'stroid::stats::JacobianStats']]], + ['done_5f_3',['done_',['../classstroid_1_1topology_1_1_t_m_o_p_progress_bar.html#afd3e86deff330cd6f65fdffe29aa7d79',1,'stroid::topology::TMOPProgressBar']]] ]; diff --git a/docs/html/search/variables_5.js b/docs/html/search/variables_5.js index ca9c138..9585bfe 100644 --- a/docs/html/search/variables_5.js +++ b/docs/html/search/variables_5.js @@ -1,8 +1,9 @@ var searchData= [ - ['r_5fcore_0',['r_core',['../structstroid_1_1config_1_1_mesh_config.html#a5c68a895f73dc82a38a8daac22a83ad7',1,'stroid::config::MeshConfig']]], - ['r_5finfinity_1',['r_infinity',['../structstroid_1_1config_1_1_mesh_config.html#ac7546899ebbfe191ea3a8bf2403b31eb',1,'stroid::config::MeshConfig']]], - ['r_5finstability_2',['r_instability',['../structstroid_1_1config_1_1_mesh_config.html#a4da6d99ff7ba24d2f917e1fd98ddd877',1,'stroid::config::MeshConfig']]], - ['r_5fstar_3',['r_star',['../structstroid_1_1config_1_1_mesh_config.html#a3fe80a30990d484dcc39b6f9a0befc05',1,'stroid::config::MeshConfig']]], - ['refinement_5flevels_4',['refinement_levels',['../structstroid_1_1config_1_1_mesh_config.html#a8cafcbebf64ae251517118eb152de981',1,'stroid::config::MeshConfig']]] + ['element_5fcounts_0',['element_counts',['../structstroid_1_1stats_1_1_mesh_stats.html#aae74d0872a0b3c0d2dea9529171388fe',1,'stroid::stats::MeshStats']]], + ['ellipticity_1',['ellipticity',['../structstroid_1_1stats_1_1_mesh_stats.html#ae9cab419f39d089ba48522385177e6ae',1,'stroid::stats::MeshStats']]], + ['envelope_2',['envelope',['../structstroid_1_1stats_1_1_refinement_stats.html#a1c1898450bd29021f9e9ee061932b805',1,'stroid::stats::RefinementStats::envelope'],['../structstroid_1_1stats_1_1_element_counts.html#a5e60266ab6c79811e4e64b09457d2138',1,'stroid::stats::ElementCounts::envelope']]], + ['envelope_5fid_3',['envelope_id',['../structstroid_1_1config_1_1_mesh_config.html#a8d30e307723eba6d964dfbe835532c8e',1,'stroid::config::MeshConfig']]], + ['errors_4',['errors',['../structstroid_1_1stats_1_1_mesh_stats.html#a77dcb0bd9fa7e211c9a14cc6e65da426',1,'stroid::stats::MeshStats']]], + ['exterior_5fcoordinate_5',['exterior_coordinate',['../structstroid_1_1_stroid_mesh.html#a6ee2e855b58552ac9204b6b85f5ade1a',1,'stroid::StroidMesh']]] ]; diff --git a/docs/html/search/variables_6.js b/docs/html/search/variables_6.js index 15b2f32..6be6cad 100644 --- a/docs/html/search/variables_6.js +++ b/docs/html/search/variables_6.js @@ -1,4 +1,4 @@ var searchData= [ - ['surface_5fbdr_5fid_0',['surface_bdr_id',['../structstroid_1_1config_1_1_mesh_config.html#a33f25ff277aa8834065e04ccb9cdbdda',1,'stroid::config::MeshConfig']]] + ['flattening_0',['flattening',['../structstroid_1_1config_1_1_mesh_config.html#af25094952d1f73e0de4368fe7a5a6f6b',1,'stroid::config::MeshConfig::flattening'],['../structstroid_1_1stats_1_1_ellipticity_stats.html#af7f40620a3fe79497492c59b3a281fc7',1,'stroid::stats::EllipticityStats::flattening'],['../structstroid_1_1stats_1_1_config_meta.html#ae91faf6fc82d7f1b40fbc56a052f3f3b',1,'stroid::stats::ConfigMeta::flattening']]] ]; diff --git a/docs/html/search/variables_7.js b/docs/html/search/variables_7.js index 87b7171..8705d10 100644 --- a/docs/html/search/variables_7.js +++ b/docs/html/search/variables_7.js @@ -1,4 +1,6 @@ var searchData= [ - ['vacuum_5fid_0',['vacuum_id',['../structstroid_1_1config_1_1_mesh_config.html#a36c7b05405691393d381086a27ea36ad',1,'stroid::config::MeshConfig']]] + ['geom_5forder_0',['geom_order',['../structstroid_1_1stats_1_1_config_meta.html#ac35acd7f85f35d509cc71cc98c93c4b3',1,'stroid::stats::ConfigMeta']]], + ['geometry_5fdofs_1',['geometry_dofs',['../structstroid_1_1stats_1_1_refinement_stats.html#a12102f92ec997538e42108a941e0f9eb',1,'stroid::stats::RefinementStats']]], + ['geometry_5ftrue_5fdofs_2',['geometry_true_dofs',['../structstroid_1_1stats_1_1_refinement_stats.html#aef469d52ee5d4b95baadfa785bd3e492',1,'stroid::stats::RefinementStats']]] ]; diff --git a/docs/html/structstroid_1_1config_1_1_mesh_config-members.html b/docs/html/structstroid_1_1config_1_1_mesh_config-members.html index 6c048d9..37c527e 100644 --- a/docs/html/structstroid_1_1config_1_1_mesh_config-members.html +++ b/docs/html/structstroid_1_1config_1_1_mesh_config-members.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -107,20 +107,25 @@ $(function(){initNavTree('structstroid_1_1config_1_1_mesh_config.html',''); init

This is the complete list of members for stroid::config::MeshConfig, including all inherited members.

- - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + +
core_idstroid::config::MeshConfig
core_steepnessstroid::config::MeshConfig
envelope_idstroid::config::MeshConfig
flatteningstroid::config::MeshConfig
include_external_domainstroid::config::MeshConfig
inf_bdr_idstroid::config::MeshConfig
orderstroid::config::MeshConfig
r_corestroid::config::MeshConfig
r_infinitystroid::config::MeshConfig
r_instabilitystroid::config::MeshConfig
r_starstroid::config::MeshConfig
refinement_levelsstroid::config::MeshConfig
surface_bdr_idstroid::config::MeshConfig
vacuum_idstroid::config::MeshConfig
continuity_orderstroid::config::MeshConfig
core_idstroid::config::MeshConfig
core_mappingstroid::config::MeshConfig
core_steepnessstroid::config::MeshConfig
envelope_idstroid::config::MeshConfig
flatteningstroid::config::MeshConfig
include_external_domainstroid::config::MeshConfig
inf_bdr_idstroid::config::MeshConfig
optimization_methodsstroid::config::MeshConfig
orderstroid::config::MeshConfig
r_corestroid::config::MeshConfig
r_infinitystroid::config::MeshConfig
r_instabilitystroid::config::MeshConfig
r_starstroid::config::MeshConfig
refinement_levelsstroid::config::MeshConfig
surface_bdr_idstroid::config::MeshConfig
vacuum_idstroid::config::MeshConfig
vacuum_outer_refinement_levelsstroid::config::MeshConfig
vacuum_refinement_levelsstroid::config::MeshConfig
diff --git a/docs/html/structstroid_1_1config_1_1_mesh_config.html b/docs/html/structstroid_1_1config_1_1_mesh_config.html index 9bf1334..5e4b8eb 100644 --- a/docs/html/structstroid_1_1config_1_1_mesh_config.html +++ b/docs/html/structstroid_1_1config_1_1_mesh_config.html @@ -31,7 +31,7 @@ Logo -
stroid v0.2.1 +
stroid v0.6.0
Multi-block curvilinear mesh generation
@@ -115,61 +115,96 @@ $(function(){initNavTree('structstroid_1_1config_1_1_mesh_config.html',''); init - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

Public Attributes

int refinement_levels = 4
 Number of uniform refinement passes applied after topology creation.
 
int order = 3
 Polynomial order for high-order elements.
 
bool include_external_domain = true
 Whether to include an external domain extending to r_infinity.
 
double r_core = 1.5
 Radius of the stellar core region.
 
double r_star = 5.0
 Radius of the stellar surface.
 
double flattening = 0
 Flattening factor for spheroidal shaping (0 = spherical, >0 = oblate).
 
double r_infinity = 6.0
 Outer radius of the external domain when enabled.
 
double r_instability = 1e-14
 Radius inside which transformations are skipped to avoid singularities.
 
double core_steepness = 1.0
 Controls the smoothness/steepness of the core-to-envelope transition.
 
size_t surface_bdr_id = 1
 Boundary attribute id for stellar surface.
 
size_t inf_bdr_id = 2
 Boundary attribute id for infinity in kelvin mapping.
 
size_t core_id = 1
 Material attribute id for the core region.
 
size_t envelope_id = 2
 Material attribute id for the envelope region.
 
size_t vacuum_id = 3
 Material attribute id for the external domain (if enabled)
 
std::optional< int > refinement_levels = 4
 Stellar refinement depth, or uniform depth when vacuum overrides are absent.
 
std::optional< int > vacuum_refinement_levels = std::nullopt
 Minimum refinement depth in the vacuum interior; unset inherits refinement_levels.
 
std::optional< int > vacuum_outer_refinement_levels = std::nullopt
 Minimum refinement depth at the vacuum outer boundary; unset inherits refinement_levels.
 
std::optional< int > order = 3
 Polynomial order for high-order elements.
 
std::optional< bool > include_external_domain = true
 Whether to include an external domain extending to r_infinity.
 
std::optional< double > r_core = 0.25
 Radius of the stellar core region.
 
std::optional< double > r_star = 1.0
 Radius of the stellar surface.
 
std::optional< double > flattening = 0
 Flattening factor for spheroidal shaping (0 = spherical, >0 = oblate).
 
std::optional< double > r_infinity = 6.0
 Outer radius of the external domain when enabled.
 
std::optional< double > r_instability = 1e-14
 Radius inside which transformations are skipped to avoid singularities.
 
std::optional< double > core_steepness = 1.0
 Controls the smoothness/steepness of the core-to-envelope transition.
 
std::optional< size_t > continuity_order = 2
 Continuity order for the core-envelope transition (0 = discontinuous, 1 = C1, 2 = C2).
 
std::optional< size_t > surface_bdr_id = 1
 Boundary attribute id for stellar surface.
 
std::optional< size_t > inf_bdr_id = 2
 Boundary attribute id for infinity in kelvin mapping.
 
std::optional< size_t > core_id = 1
 Material attribute id for the core region.
 
std::optional< size_t > envelope_id = 2
 Material attribute id for the envelope region.
 
std::optional< size_t > vacuum_id = 3
 Material attribute id for the external domain (if enabled)
 
std::optional< OptimizationMethods > optimization_methods = OptimizationMethods{true, true}
 
std::optional< std::string > core_mapping = "multi_block"
 Core mapping strategy: legacy "spherified" or conditioned "multi_block".
 

Detailed Description

Configuration parameters for stroid mesh generation.

-

These values are typically loaded via fourdst::config::Config<stroid::config::MeshConfig> from a TOML file. The README shows the expected TOML layout under the [main] table. Unspecified keys use the defaults defined here.

+

These values are typically loaded via fourdst::config::Config<stroid::config::MeshConfig> from a TOML file. The README shows the expected TOML layout under the [main] table. Unspecified geometry keys use the defaults defined here. ResolveDefaults preserves the historical fallback for omitted mapping and optimization controls in TOML files.

Member Data Documentation

- -

◆ core_id

+ +

◆ continuity_order

- + + +
size_t stroid::config::MeshConfig::core_id = 1std::optional<size_t> stroid::config::MeshConfig::continuity_order = 2
+
+ +

Continuity order for the core-envelope transition (0 = discontinuous, 1 = C1, 2 = C2).

+

+toml

+
    +
  • [main].continuity_order
    • +
+ +
+
+ +

◆ core_id

+ +
+
+ + +
std::optional<size_t> stroid::config::MeshConfig::core_id = 1
@@ -183,14 +218,37 @@ toml
- -

◆ core_steepness

+ +

◆ core_mapping

- + + +
double stroid::config::MeshConfig::core_steepness = 1.0std::optional<std::string> stroid::config::MeshConfig::core_mapping = "multi_block"
+
+ +

Core mapping strategy: legacy "spherified" or conditioned "multi_block".

+

spherified generates a either two or three inscribed cubes then projects them into spheres. multi_block generates a multi-block topology with a single core block and six envelope blocks, then projects the core block into a sphere and the envelope blocks into a spheroid.

+

multi_block is strongly preferred for its ~1000x improved condition number, Spherified is only provided for legacy compatibility.

+

+toml

+
    +
  • [main].core_mapping
    • +
+ +
+
+ +

◆ core_steepness

+ +
+
+ + +
std::optional<double> stroid::config::MeshConfig::core_steepness = 1.0
@@ -204,14 +262,14 @@ toml
- -

◆ envelope_id

+ +

◆ envelope_id

- +
size_t stroid::config::MeshConfig::envelope_id = 2std::optional<size_t> stroid::config::MeshConfig::envelope_id = 2
@@ -225,14 +283,14 @@ toml
- -

◆ flattening

+ +

◆ flattening

- +
double stroid::config::MeshConfig::flattening = 0std::optional<double> stroid::config::MeshConfig::flattening = 0
@@ -246,14 +304,14 @@ toml
- -

◆ include_external_domain

+ +

◆ include_external_domain

- +
bool stroid::config::MeshConfig::include_external_domain = truestd::optional<bool> stroid::config::MeshConfig::include_external_domain = true
@@ -267,14 +325,14 @@ toml
- -

◆ inf_bdr_id

+ +

◆ inf_bdr_id

- +
size_t stroid::config::MeshConfig::inf_bdr_id = 2std::optional<size_t> stroid::config::MeshConfig::inf_bdr_id = 2
@@ -288,14 +346,28 @@ toml
- -

◆ order

+ +

◆ optimization_methods

- + + +
int stroid::config::MeshConfig::order = 3std::optional<OptimizationMethods> stroid::config::MeshConfig::optimization_methods = OptimizationMethods{true, true}
+
+ +
+
+ +

◆ order

+ +
+
+ + +
std::optional<int> stroid::config::MeshConfig::order = 3
@@ -309,14 +381,14 @@ toml
- -

◆ r_core

+ +

◆ r_core

- +
double stroid::config::MeshConfig::r_core = 1.5std::optional<double> stroid::config::MeshConfig::r_core = 0.25
@@ -330,14 +402,14 @@ toml
- -

◆ r_infinity

+ +

◆ r_infinity

- +
double stroid::config::MeshConfig::r_infinity = 6.0std::optional<double> stroid::config::MeshConfig::r_infinity = 6.0
@@ -351,14 +423,14 @@ toml
- -

◆ r_instability

+ +

◆ r_instability

- +
double stroid::config::MeshConfig::r_instability = 1e-14std::optional<double> stroid::config::MeshConfig::r_instability = 1e-14
@@ -372,14 +444,14 @@ toml
- -

◆ r_star

+ +

◆ r_star

- +
double stroid::config::MeshConfig::r_star = 5.0std::optional<double> stroid::config::MeshConfig::r_star = 1.0
@@ -393,19 +465,19 @@ toml
- -

◆ refinement_levels

+ +

◆ refinement_levels

- +
int stroid::config::MeshConfig::refinement_levels = 4std::optional<int> stroid::config::MeshConfig::refinement_levels = 4
-

Number of uniform refinement passes applied after topology creation.

+

Stellar refinement depth, or uniform depth when vacuum overrides are absent.

toml

    @@ -414,14 +486,14 @@ toml
- -

◆ surface_bdr_id

+ +

◆ surface_bdr_id

- +
size_t stroid::config::MeshConfig::surface_bdr_id = 1std::optional<size_t> stroid::config::MeshConfig::surface_bdr_id = 1
@@ -435,14 +507,14 @@ toml
- -

◆ vacuum_id

+ +

◆ vacuum_id

- +
size_t stroid::config::MeshConfig::vacuum_id = 3std::optional<size_t> stroid::config::MeshConfig::vacuum_id = 3
@@ -454,6 +526,50 @@ toml
  • [main].vacuum_id
    • +
    +
    + +

    ◆ vacuum_outer_refinement_levels

    + +
    +
    + + + + +
    std::optional<int> stroid::config::MeshConfig::vacuum_outer_refinement_levels = std::nullopt
    +
    + +

    Minimum refinement depth at the vacuum outer boundary; unset inherits refinement_levels.

    +

    Boundary-adjacent cells are refined automatically, with grading toward the vacuum interior. Geometry uses the same polynomial order in every region.

    +

    +toml

    +
      +
    • [main].vacuum_outer_refinement_levels
      • +
    + +
    +
    + +

    ◆ vacuum_refinement_levels

    + +
    +
    + + + + +
    std::optional<int> stroid::config::MeshConfig::vacuum_refinement_levels = std::nullopt
    +
    + +

    Minimum refinement depth in the vacuum interior; unset inherits refinement_levels.

    +

    Setting either vacuum override enables local isotropic refinement. Vacuum cells at the stellar surface match the stellar refinement, and automatic one-level grading can raise the interior depth above this minimum. Requires an external domain.

    +

    +toml

    +
      +
    • [main].vacuum_refinement_levels
      • +
    +
    The documentation for this struct was generated from the following file:
      diff --git a/docs/html/structstroid_1_1config_1_1_mesh_config.js b/docs/html/structstroid_1_1config_1_1_mesh_config.js index e08ceff..dfb86a7 100644 --- a/docs/html/structstroid_1_1config_1_1_mesh_config.js +++ b/docs/html/structstroid_1_1config_1_1_mesh_config.js @@ -1,17 +1,22 @@ var structstroid_1_1config_1_1_mesh_config = [ - [ "core_id", "structstroid_1_1config_1_1_mesh_config.html#a2faa5aa1fef84ebbda30590d3fb2799b", null ], - [ "core_steepness", "structstroid_1_1config_1_1_mesh_config.html#aed32864839b149c94842801b6413d94d", null ], - [ "envelope_id", "structstroid_1_1config_1_1_mesh_config.html#ac99aa48fe3e71e2ef57b09d48cacfef8", null ], - [ "flattening", "structstroid_1_1config_1_1_mesh_config.html#affad4638b0ae7b710f2b2db992f6f584", null ], - [ "include_external_domain", "structstroid_1_1config_1_1_mesh_config.html#a062652781f4f3ea0b7ca8764362a7368", null ], - [ "inf_bdr_id", "structstroid_1_1config_1_1_mesh_config.html#a64cb00c8cba27267279a52207a4b5be0", null ], - [ "order", "structstroid_1_1config_1_1_mesh_config.html#a860e78f1906acb0c3aa08d55f94de3fd", null ], - [ "r_core", "structstroid_1_1config_1_1_mesh_config.html#a5c68a895f73dc82a38a8daac22a83ad7", null ], - [ "r_infinity", "structstroid_1_1config_1_1_mesh_config.html#ac7546899ebbfe191ea3a8bf2403b31eb", null ], - [ "r_instability", "structstroid_1_1config_1_1_mesh_config.html#a4da6d99ff7ba24d2f917e1fd98ddd877", null ], - [ "r_star", "structstroid_1_1config_1_1_mesh_config.html#a3fe80a30990d484dcc39b6f9a0befc05", null ], - [ "refinement_levels", "structstroid_1_1config_1_1_mesh_config.html#a8cafcbebf64ae251517118eb152de981", null ], - [ "surface_bdr_id", "structstroid_1_1config_1_1_mesh_config.html#a33f25ff277aa8834065e04ccb9cdbdda", null ], - [ "vacuum_id", "structstroid_1_1config_1_1_mesh_config.html#a36c7b05405691393d381086a27ea36ad", null ] + [ "continuity_order", "structstroid_1_1config_1_1_mesh_config.html#ae8bf54f7fd649578d44e46e96f501e34", null ], + [ "core_id", "structstroid_1_1config_1_1_mesh_config.html#ad6af127dd2bdcba58dd64eee24378dbe", null ], + [ "core_mapping", "structstroid_1_1config_1_1_mesh_config.html#a932e1257cacf5831c216bc3c48d4346d", null ], + [ "core_steepness", "structstroid_1_1config_1_1_mesh_config.html#aae33c48f949858944a6baa6033cebb7b", null ], + [ "envelope_id", "structstroid_1_1config_1_1_mesh_config.html#a8d30e307723eba6d964dfbe835532c8e", null ], + [ "flattening", "structstroid_1_1config_1_1_mesh_config.html#af25094952d1f73e0de4368fe7a5a6f6b", null ], + [ "include_external_domain", "structstroid_1_1config_1_1_mesh_config.html#acdb3428f1e33b6826f28334b58023432", null ], + [ "inf_bdr_id", "structstroid_1_1config_1_1_mesh_config.html#a25dbc70bcd2407ce7deaa0ee61b8886a", null ], + [ "optimization_methods", "structstroid_1_1config_1_1_mesh_config.html#adf95ea0245d8e864c795e3c594abd19e", null ], + [ "order", "structstroid_1_1config_1_1_mesh_config.html#aeb1b7fa26699dfa57e5b39a8cd9042ee", null ], + [ "r_core", "structstroid_1_1config_1_1_mesh_config.html#a497cda69d9e7a3e9b96960d25d0f37de", null ], + [ "r_infinity", "structstroid_1_1config_1_1_mesh_config.html#af181d2f6285ad8203025453d434e091e", null ], + [ "r_instability", "structstroid_1_1config_1_1_mesh_config.html#a882ce722c90fbd1792425f06577fa361", null ], + [ "r_star", "structstroid_1_1config_1_1_mesh_config.html#ae54149369309132d3058c21a0556c14f", null ], + [ "refinement_levels", "structstroid_1_1config_1_1_mesh_config.html#abb2757a2e4cbd63bb2b878ef5fccb95c", null ], + [ "surface_bdr_id", "structstroid_1_1config_1_1_mesh_config.html#a1def8d916aa47fcc1c90576cec7c13bd", null ], + [ "vacuum_id", "structstroid_1_1config_1_1_mesh_config.html#a6f745a2225c5a48256864ba859848ce9", null ], + [ "vacuum_outer_refinement_levels", "structstroid_1_1config_1_1_mesh_config.html#a8cf8a78cb10342afeaaaf55f2ec5f673", null ], + [ "vacuum_refinement_levels", "structstroid_1_1config_1_1_mesh_config.html#adbfd27ab0f86beedb15ecb1a2e8d92c9", null ] ]; \ No newline at end of file diff --git a/docs/html/topology_8cpp.html b/docs/html/topology_8cpp.html index e25fe7b..2341e39 100644 --- a/docs/html/topology_8cpp.html +++ b/docs/html/topology_8cpp.html @@ -31,7 +31,7 @@ Logo -
      stroid v0.2.1 +
      stroid v0.6.0
      Multi-block curvilinear mesh generation
      @@ -110,19 +110,25 @@ $(function(){initNavTree('topology_8cpp.html',''); initResizable(true); });
      #include "mfem.hpp"
      #include <vector>
      #include <memory>
      +#include <cmath>
      +#include <stdexcept>
      +#include <algorithm>
      +#include <limits>
      #include "stroid/config/config.h"
      #include "fourdst/config/config.h"
      Include dependency graph for topology.cpp:
      -
      +
      + +

      Namespaces

      namespace  stroid
       Public API surface for the stroid mesh generation library.
       
      namespace  stroid::topology
       Topology construction and curvilinear mapping utilities.
       
      - +

      @@ -131,7 +137,7 @@ Functions

       Build the initial multi-block mesh topology for the star model.
       
      void stroid::topology::Finalize (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
       Finalize topology, validate orientation, and apply uniform refinement.
       Finalize topology, validate orientation, and apply the configured refinement policy.
       
      diff --git a/docs/html/topology_8cpp__incl.map b/docs/html/topology_8cpp__incl.map index 8896ed3..0418aff 100644 --- a/docs/html/topology_8cpp__incl.map +++ b/docs/html/topology_8cpp__incl.map @@ -1,13 +1,31 @@ - + - + - + - - - - - + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/topology_8cpp__incl.md5 b/docs/html/topology_8cpp__incl.md5 index 05c9694..bb768e1 100644 --- a/docs/html/topology_8cpp__incl.md5 +++ b/docs/html/topology_8cpp__incl.md5 @@ -1 +1 @@ -9579b4c4c61aad1700ed9ec77f8cef0d \ No newline at end of file +35f177306fe399627acb0aa33e7d59c7 \ No newline at end of file diff --git a/docs/html/topology_8cpp__incl.svg b/docs/html/topology_8cpp__incl.svg index 4a9b3df..2998545 100644 --- a/docs/html/topology_8cpp__incl.svg +++ b/docs/html/topology_8cpp__incl.svg @@ -1,13 +1,12 @@ - - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + src/lib/topology/topology.cpp Node1 - -src/lib/topology/topology.cpp + +src/lib/topology/topology.cpp @@ -32,8 +68,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -41,8 +77,8 @@ Node1->Node2 - - + + @@ -50,8 +86,8 @@ Node3 - -vector + +vector @@ -59,8 +95,8 @@ Node1->Node3 - - + + @@ -68,8 +104,8 @@ Node4 - -memory + +memory @@ -77,17 +113,17 @@ Node1->Node4 - - + + Node5 - - -stroid/config/config.h + + +cmath @@ -95,8 +131,8 @@ Node1->Node5 - - + + @@ -104,8 +140,8 @@ Node6 - -fourdst/config/config.h + +stdexcept @@ -113,13 +149,196 @@ Node1->Node6 - - + + + + + + + +Node7 + + +algorithm + + + + + +Node1->Node7 + + + + + + + + +Node8 + + +limits + + + + + +Node1->Node8 + + + + + + + + +Node9 + + +stroid/config/config.h + + + + + +Node1->Node9 + + + + + + + + +Node15 + + +fourdst/config/config.h + + + + + +Node1->Node15 + + + + + + + + +Node10 + + +cstdint + + + + + +Node9->Node10 + + + + + + + + +Node11 + + +optional + + + + + +Node9->Node11 + + + + + + + + +Node12 + + +string + + + + + +Node9->Node12 + + + + + + + + +Node13 + + +format + + + + + +Node9->Node13 + + + + + + + + +Node14 + + +sstream + + + + + +Node9->Node14 + + + + + + + + + + + + + + + + + + + + + Logo -
      stroid v0.2.1 +
      stroid v0.6.0
      Multi-block curvilinear mesh generation
      @@ -114,14 +114,21 @@ $(function(){initNavTree('topology_8h.html',''); initResizable(true); });
      Include dependency graph for topology.h:
      -
      +
      +
      +
      +This graph shows which files directly or indirectly include this file:
      +
      +
      + +

      Namespaces

      namespace  stroid
       Public API surface for the stroid mesh generation library.
       
      namespace  stroid::topology
       Topology construction and curvilinear mapping utilities.
       
      - +

      @@ -130,7 +137,7 @@ Functions

       Build the initial multi-block mesh topology for the star model.
       
      void stroid::topology::Finalize (mfem::Mesh &mesh, const fourdst::config::Config< config::MeshConfig > &config)
       Finalize topology, validate orientation, and apply uniform refinement.
       Finalize topology, validate orientation, and apply the configured refinement policy.
       
    diff --git a/docs/html/topology_8h__incl.map b/docs/html/topology_8h__incl.map index 878a986..d00b48c 100644 --- a/docs/html/topology_8h__incl.map +++ b/docs/html/topology_8h__incl.map @@ -1,11 +1,21 @@ - - - - - - - - - + + + + + + + + + + + + + + + + + + + diff --git a/docs/html/topology_8h__incl.md5 b/docs/html/topology_8h__incl.md5 index 1bd48fe..5f8c0e9 100644 --- a/docs/html/topology_8h__incl.md5 +++ b/docs/html/topology_8h__incl.md5 @@ -1 +1 @@ -b2a69d423ae47906416c55db34906c94 \ No newline at end of file +dbeb5f5c67402daa36c503239a843e28 \ No newline at end of file diff --git a/docs/html/topology_8h__incl.svg b/docs/html/topology_8h__incl.svg index 0bae36e..39d73b3 100644 --- a/docs/html/topology_8h__incl.svg +++ b/docs/html/topology_8h__incl.svg @@ -1,11 +1,11 @@ - - + @@ -17,15 +17,15 @@ ]]> - + src/include/stroid/topology/topology.h Node1 - -src/include/stroid -/topology/topology.h + +src/include/stroid +/topology/topology.h @@ -33,8 +33,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -42,8 +42,8 @@ Node1->Node2 - - + + @@ -51,8 +51,8 @@ Node3 - -stroid/config/config.h + +stroid/config/config.h @@ -60,8 +60,44 @@ Node1->Node3 - - + + + + + + + +Node9 + + +fourdst/config/config.h + + + + + +Node1->Node9 + + + + + + + + +Node10 + + +memory + + + + + +Node1->Node10 + + + @@ -69,17 +105,17 @@ Node4 - -fourdst/config/config.h + +cstdint - - -Node1->Node4 - - - + + +Node3->Node4 + + + @@ -87,17 +123,71 @@ Node5 - -memory + +optional - - -Node1->Node5 - - - + + +Node3->Node5 + + + + + + + + +Node6 + + +string + + + + + +Node3->Node6 + + + + + + + + +Node7 + + +format + + + + + +Node3->Node7 + + + + + + + + +Node8 + + +sstream + + + + + +Node3->Node8 + + + diff --git a/docs/html/topology_8h__incl_org.svg b/docs/html/topology_8h__incl_org.svg index 39c51a1..af0e70e 100644 --- a/docs/html/topology_8h__incl_org.svg +++ b/docs/html/topology_8h__incl_org.svg @@ -1,20 +1,20 @@ - - - + + src/include/stroid/topology/topology.h Node1 - -src/include/stroid -/topology/topology.h + +src/include/stroid +/topology/topology.h @@ -22,8 +22,8 @@ Node2 - -mfem.hpp + +mfem.hpp @@ -31,8 +31,8 @@ Node1->Node2 - - + + @@ -40,8 +40,8 @@ Node3 - -stroid/config/config.h + +stroid/config/config.h @@ -49,8 +49,44 @@ Node1->Node3 - - + + + + + + + +Node9 + + +fourdst/config/config.h + + + + + +Node1->Node9 + + + + + + + + +Node10 + + +memory + + + + + +Node1->Node10 + + + @@ -58,17 +94,17 @@ Node4 - -fourdst/config/config.h + +cstdint - - -Node1->Node4 - - - + + +Node3->Node4 + + + @@ -76,17 +112,71 @@ Node5 - -memory + +optional - - -Node1->Node5 - - - + + +Node3->Node5 + + + + + + + + +Node6 + + +string + + + + + +Node3->Node6 + + + + + + + + +Node7 + + +format + + + + + +Node3->Node7 + + + + + + + + +Node8 + + +sstream + + + + + +Node3->Node8 + + + diff --git a/docs/static/mainpage.md b/docs/static/mainpage.md index 9f61eaa..0017e0c 100644 --- a/docs/static/mainpage.md +++ b/docs/static/mainpage.md @@ -1,3 +1,4 @@ +![stroid logo](assets/logo/Logo.png) # Stroid ## A multi-block mesh generation tool for stellar modeling @@ -11,7 +12,7 @@ and non-singular meshes. ## Building and Installing Stroid uses meson as its build system, specifically we require version 1.3.0 or higher. Further, stroid depends on C++23 standard library features, so both a compatible compiler and standard template -library are required. All other dependencies are handled by meson and will be downloaded and built +library are required. All other dependencies are handled by meson and will be downloaded and built automatically. ### Building @@ -91,62 +92,180 @@ inf_bdr_id = 2 core_id = 1 envelope_id = 2 vacuum_id = 3 +core_mapping = "multi_block" + + +[main.optimization_methods] +tmop = false +smoothstep = true ``` -| Parameter | Description | Default | -|-------------------------|-----------------------------------------------------------------------------------------------------|---------| -| refinement_levels | Number of uniform refinement levels to apply to the mesh after generation | 4 | -| order | The polynomial order of the finite elements in the mesh | 3 | -| include_external_domain | Whether to include an external domain extending to r_infinity | true | -| r_core | The radius of the core region of the star | 1.5 | -| r_star | The radius of the star | 5.0 | -| flattening | The flattening factor of the star (0 for spherical, >0 for oblate) | 0 | -| r_infinity | The outer radius of the external domain (if included) | 6.0 | -| r_instability | The radius at which no transformations are applied to the initial topology (to avoid singularities) | 1e-14 | -| core_steepness | The steepness of the transition between the core and envelope regions of the star | 1.0 | -| surface_bdr_id | The boundary ID to assign to the surface of the star | 1 | -| inf_bdr_id | The boundary ID to assign to the outer boundary of the external domain (if included) | 2 | -| core_id | The material ID to assign to the core region of the star | 1 | -| envelope_id | The material ID to assign to the envelope region of the star | 2 | -| vacuum_id | The material ID to assign to the vacuum region of the star (if included) | 3 | +| Parameter | Description | Default | +|---------------------------------|----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|---------------| +| refinement_levels | Stellar minimum depth, or uniform depth when vacuum overrides are omitted | 4 | +| order | The polynomial order of the finite elements in the mesh | 3 | +| include_external_domain | Whether to include an external domain extending to r_infinity | true | +| r_core | The radius of the core region of the star | 0.25 | +| r_star | The radius of the star | 1.0 | +| flattening | The flattening factor of the star (0 for spherical, >0 for oblate) | 0 | +| r_infinity | The outer radius of the external domain (if included) | 6.0 | +| r_instability | The radius at which no transformations are applied to the initial topology (to avoid singularities) | 1e-14 | +| core_steepness | The steepness of the transition between the core and envelope regions of the star | 1.0 | +| surface_bdr_id | The boundary ID to assign to the surface of the star | 1 | +| inf_bdr_id | The boundary ID to assign to the outer boundary of the external domain (if included) | 2 | +| core_id | The material ID to assign to the core region of the star | 1 | +| envelope_id | The material ID to assign to the envelope region of the star | 2 | +| vacuum_id | The material ID to assign to the vacuum region of the star (if included) | 3 | +| optimization_methods.tmop | The tmop flag enables or disables the use of TMOP ideal shape unit size metric optimization during mesh generation. This can help improve the quality of the generated mesh, but will dramatically increase the time required for mesh generation. | false | +| optimization_methods.smoothstep | The smoothstep flag enables or disables the use of a smoothstep function to transition between the core and envelope regions of the star. This can help improve the quality of the generated mesh | true | +| core_mapping | The core mapping strategy to use for the mesh generation. Options are "spherified" (legacy) or "multi_block" (conditioned). The multi_block strategy is strongly preferred for its improved condition number. | "multi_block" | If no configuration file is provided, stroid will use the default parameters listed above. Further, configuration files -need only include parameters that differ from the defaults, any parameters not specified will use the default values. +need only include parameters that differ from the defaults. For compatibility with older TOML files, +an omitted `core_mapping` uses `"spherified"`, and omitted TMOP controls leave optimization disabled. +Set `core_mapping = "multi_block"` explicitly to use the conditioned mapping in a TOML file. +Default-constructed C++ and Python `MeshConfig` objects select `"multi_block"`; other omitted TOML +geometry fields use the defaults from `MeshConfig`. + +### Conditioned core mapping + +There are two core mapping strategies, spherified and multi_block. Generally multi_block should be strongly preferred. The +`core_mapping = "multi_block"` strategy avoids the radial rank loss at the eight corners of the spherified core +block. It uses a Cartesian center plus six transition blocks inside the core. The inner cube has circumscribed radius +`r_core / 2`; its six faces connect linearly to the existing spherical `r_core` interface. If enabled, spheroidal flattening is +applied afterwards. + +```python +cfg = stroid.config.MeshConfig(core_mapping="multi_block", refinement_levels=2) +cfg.optimization_methods = stroid.config.OptimizationMethods(tmop=False) +mesh = stroid.GenerateMesh(cfg) +``` + +The optional, non-installed `geometry_quality_experiment` target may be used to measure the actual high-order geometry +at quadrature points, vertices, edges, and near-corner probes. You may build and run it explicitly: + +```bash +meson compile -C build geometry_quality_experiment +build/tools/geometry_quality_experiment --orders 4 --refinements 2 \ + --contraction-probe --probe-order 3 --output core_comparison.csv +``` + +### Nonconforming vacuum refinement + +Stroid can keep the star and both ends of the vacuum well resolved while using +coarser elements in the vacuum interior. Refinement is isotropic: each refinement +splits a hexahedron into eight children. Note however that only one geometric polynomial `order` applies +to every region. + +```toml +[main] +refinement_levels = 4 +vacuum_refinement_levels = 2 +# Optional: omitted outer depth inherits refinement_levels (4 here). +# vacuum_outer_refinement_levels = 4 +order = 3 +include_external_domain = true +core_mapping = "multi_block" + +[main.optimization_methods] +tmop = false +smoothstep = true +``` + +`configs/nonconforming_vacuum.toml` provides a complete example. The three depth +settings are absolute minimum targets measured from the initial block topology: + +| Setting | Applies to | Default | +|----------------------------------|------------------------------------------|-----------------------------| +| `refinement_levels` | Core and envelope | `4` | +| `vacuum_refinement_levels` | Vacuum interior | Inherit `refinement_levels` | +| `vacuum_outer_refinement_levels` | Cells touching the vacuum outer boundary | Inherit `refinement_levels` | + +Omitting both vacuum overrides preserves uniform generation. Supplying either +activates the local refinement policy and requires `include_external_domain = true`. +All levels must be nonnegative integers. + +Stroid enforces that vacuum cells touching the stellar surface match the stellar face subdivision. That is to say that +the inner boundary of the vacuum region is conforming to the outer boundary of the stellar region. Further, the +outer-boundary cells receive the outer target, and automatic grading limits neighboring refinement depths to one level. +This two layer approach is intended to allow for refinement when using compactification maps. + +```python +import stroid + +cfg = stroid.config.MeshConfig( + refinement_levels=4, + vacuum_refinement_levels=2, + vacuum_outer_refinement_levels=None, # Inherit stellar depth. + order=3, + core_mapping="multi_block", + optimization_methods=stroid.config.OptimizationMethods(tmop=False), +) +mesh = stroid.GenerateMesh(cfg) +features = stroid.stats.MESH_STAT_DEFAULT | stroid.stats.MeshStatFeatures.ELEMENT_COUNT +stats = stroid.stats.ComputeMeshStats(mesh, features) +print(stats.element_counts.vacuum) +print(stats.refinement.vacuum.min_depth, stats.refinement.vacuum.max_depth) +print(stats.refinement.geometry_dofs, stats.refinement.geometry_true_dofs) +print(stats.conformity.conforming, stats.conformity.n_nonconforming_faces) + +stroid.IO.SaveStroidMesh(mesh, "graded.stroid") +restored = stroid.IO.LoadStroidMesh("graded.stroid") +stroid.refinement.UniformRefinement(restored, 1) +``` + + +The `UniformRefinement(mesh, n)` function adds `n` levels to every current leaf while preserving the +existing grading, and rebuilds the geometry and exterior coordinate. Note that this means that a non-conforming mesh +that has been Uniformly refined will still be non-conforming, but the refinement will be applied to all leaves. + +#### Viewing curved meshes in GLVis + +It is important to note --- and potentially confusing if not understood --- that GLVis approximates curved faces with +flat triangles. At a hanging interface, the same subdivision count on a coarse face and its finer neighbors samples the +curved surface at different locations. This can produce apparent gaps even when the finite-element face transformations +agree. These gaps are not indications that the mesh itself is non-conforming; rather, they are a visualization artifact. ### C++ Interface Stroid can be used as a library in C++ projects. After installation, include the stroid header and link against the stroid library. A basic example of using stroid in C++ is shown below (note that you will need a glvis instance running on localhost:19916 to visualize the mesh): ```c++ -#include -#include "mfem.hpp" - -#include "stroid/config/config.h" -#include "stroid/IO/mesh.h" -#include "stroid/topology/curvilinear.h" -#include "stroid/topology/topology.h" - -#include "fourdst/config/config.h" +#include "stroid/stroid.h" int main() { - const fourdst::config::Config cfg; + stroid::config::MeshConfig cfg; + cfg.refinement_levels = 4; + cfg.vacuum_refinement_levels = 2; + cfg.optimization_methods = stroid::config::OptimizationMethods{false, true}; - const std::unique_ptr mesh = stroid::topology::BuildSkeleton(cfg); - stroid::topology::Finalize(*mesh, cfg); - stroid::topology::PromoteToHighOrder(*mesh, cfg); - stroid::topology::ProjectMesh(*mesh, cfg); - - - stroid::IO::ViewMesh(*mesh, "Spheroidal Mesh", stroid::IO::VISUALIZATION_MODE::BOUNDARY_ELEMENT_ID); + auto mesh = stroid::GenerateMesh(cfg); + stroid::IO::SaveStroidMesh(mesh, "graded.stroid"); + stroid::IO::ViewMesh(mesh, "Spheroidal Mesh", stroid::IO::VISUALIZATION_MODE::ELEMENT_ID, "localhost", 19916); } ``` +## Example Meshes +An example mesh with the default configuration parameters is shown below (coloration indicates attribute IDs of different regions): +![Example Mesh](assets/imgs/ExampleMesh_multi-block.png) + +The legacy spherified core mapping strategy is shown below as well +![Example Spheried Mesh](assets/imgs/ExampleMesh_spherified.png) + +An example of a non-conforming mesh generated with stroid. Note that the gaps between elements are a visualization artifact +rather than true gaps within the mesh. +![Non Conforming Mesh](assets/imgs/ExampleMesh_NC.png) + +Note that both of these meshes are shown with 3 levels of refinement and polynomial order 3. Blue shows the core +domain, yellow shows the envelope domain, while purple shows the vacuum domain. + + ## Funding Stroid is developed as part of the 4D-STAR project. 4D-STAR is funded by European Research Council (ERC) under the Horizon Europe programme (Synergy Grant agreement No. 101071505: 4D-STAR) Work for this project is funded by the European Union. Views and opinions expressed are however those of the author(s) -only and do not necessarily reflect those of the European Union or the European Research Council. \ No newline at end of file +only and do not necessarily reflect those of the European Union or the European Research Council.