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<div id="projectname">fourdst::libcomposition<span id="projectnumber"> v2.4.9</span>
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<div id="projectbrief">Robust atomic species information library</div>
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<div class="headertitle"><div class="title">composition_masked.cpp</div></div>
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<a href="composition__masked_8cpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a id="l00001" name="l00001"></a><span class="lineno"> 1</span><span class="preprocessor">#include "<a class="code" href="composition__masked_8h.html">fourdst/composition/decorators/composition_masked.h</a>"</span></div>
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<div class="line"><a id="l00002" name="l00002"></a><span class="lineno"> 2</span><span class="preprocessor">#include "<a class="code" href="exceptions__composition_8h.html">fourdst/composition/exceptions/exceptions_composition.h</a>"</span></div>
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<div class="line"><a id="l00003" name="l00003"></a><span class="lineno"> 3</span><span class="preprocessor">#include "<a class="code" href="species_8h.html">fourdst/atomic/species.h</a>"</span></div>
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<div class="line"><a id="l00004" name="l00004"></a><span class="lineno"> 4</span> </div>
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<div class="line"><a id="l00005" name="l00005"></a><span class="lineno"> 5</span><span class="preprocessor">#include <algorithm></span></div>
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<div class="line"><a id="l00006" name="l00006"></a><span class="lineno"> 6</span><span class="preprocessor">#include <memory></span></div>
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<div class="line"><a id="l00007" name="l00007"></a><span class="lineno"> 7</span><span class="preprocessor">#include <string></span></div>
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<div class="line"><a id="l00008" name="l00008"></a><span class="lineno"> 8</span><span class="preprocessor">#include <vector></span></div>
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<div class="line"><a id="l00009" name="l00009"></a><span class="lineno"> 9</span><span class="preprocessor">#include <set></span></div>
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<div class="line"><a id="l00010" name="l00010"></a><span class="lineno"> 10</span><span class="preprocessor">#include <unordered_map></span></div>
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<div class="line"><a id="l00011" name="l00011"></a><span class="lineno"> 11</span> </div>
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<div class="line"><a id="l00012" name="l00012"></a><span class="lineno"> 12</span><span class="preprocessor">#include "<a class="code" href="composition__hash_8h.html">fourdst/composition/utils/composition_hash.h</a>"</span></div>
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<div class="line"><a id="l00013" name="l00013"></a><span class="lineno"> 13</span> </div>
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<div class="line"><a id="l00014" name="l00014"></a><span class="lineno"> 14</span><span class="keyword">namespace </span><a class="code hl_namespace" href="namespacefourdst_1_1composition.html">fourdst::composition</a> {</div>
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<div class="foldopen" id="foldopen00015" data-start="{" data-end="}">
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<div class="line"><a id="l00015" name="l00015"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a9a0d839e4534494b7adaf353d56e5375"> 15</a></span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a9a0d839e4534494b7adaf353d56e5375">MaskedComposition::MaskedComposition</a>(</div>
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<div class="line"><a id="l00016" name="l00016"></a><span class="lineno"> 16</span> <span class="keyword">const</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1_composition_abstract.html">CompositionAbstract</a>& baseComposition,</div>
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<div class="line"><a id="l00017" name="l00017"></a><span class="lineno"> 17</span> <span class="keyword">const</span> std::vector<atomic::Species>& activeSpecies</div>
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<div class="line"><a id="l00018" name="l00018"></a><span class="lineno"> 18</span> ) :</div>
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<div class="line"><a id="l00019" name="l00019"></a><span class="lineno"> 19</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a115e0c194a3dffddc558e0305cc56677">CompositionDecorator</a>(baseComposition.<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a30f89ba71d9db6ad330c645d0a161164">clone</a>()),</div>
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<div class="line"><a id="l00020" name="l00020"></a><span class="lineno"> 20</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>(activeSpecies) {</div>
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<div class="line"><a id="l00021" name="l00021"></a><span class="lineno"> 21</span> </div>
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<div class="line"><a id="l00022" name="l00022"></a><span class="lineno"> 22</span> std::ranges::sort(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>, [](<span class="keyword">const</span> <span class="keyword">auto</span> &a, <span class="keyword">const</span> <span class="keyword">auto</span> &b) {</div>
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<div class="line"><a id="l00023" name="l00023"></a><span class="lineno"> 23</span> <span class="keywordflow">return</span> a < b;</div>
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<div class="line"><a id="l00024" name="l00024"></a><span class="lineno"> 24</span> });</div>
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<div class="line"><a id="l00025" name="l00025"></a><span class="lineno"> 25</span> </div>
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<div class="line"><a id="l00026" name="l00026"></a><span class="lineno"> 26</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">m_molarAbundances</a>.reserve(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.size());</div>
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<div class="line"><a id="l00027" name="l00027"></a><span class="lineno"> 27</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00028" name="l00028"></a><span class="lineno"> 28</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00029" name="l00029"></a><span class="lineno"> 29</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">m_molarAbundances</a>.push_back(0.0);</div>
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<div class="line"><a id="l00030" name="l00030"></a><span class="lineno"> 30</span> } <span class="keywordflow">else</span> {</div>
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<div class="line"><a id="l00031" name="l00031"></a><span class="lineno"> 31</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">m_molarAbundances</a>.push_back(<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a0c46d440cafd9ae2d04589ece5fd41fb">CompositionDecorator::getMolarAbundance</a>(species));</div>
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<div class="line"><a id="l00032" name="l00032"></a><span class="lineno"> 32</span> }</div>
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<div class="line"><a id="l00033" name="l00033"></a><span class="lineno"> 33</span> }</div>
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<div class="line"><a id="l00034" name="l00034"></a><span class="lineno"> 34</span> </div>
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<div class="line"><a id="l00035" name="l00035"></a><span class="lineno"> 35</span> }</div>
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</div>
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<div class="line"><a id="l00036" name="l00036"></a><span class="lineno"> 36</span> </div>
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<div class="foldopen" id="foldopen00037" data-start="{" data-end="}">
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<div class="line"><a id="l00037" name="l00037"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966"> 37</a></span> <span class="keywordtype">bool</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">MaskedComposition::contains</a>(<span class="keyword">const</span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a> &species) <span class="keyword">const</span> <span class="keyword">noexcept</span>{</div>
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<div class="line"><a id="l00038" name="l00038"></a><span class="lineno"> 38</span> <span class="keywordflow">return</span> std::ranges::contains(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>, species);</div>
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<div class="line"><a id="l00039" name="l00039"></a><span class="lineno"> 39</span> }</div>
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</div>
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<div class="line"><a id="l00040" name="l00040"></a><span class="lineno"> 40</span> </div>
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<div class="foldopen" id="foldopen00041" data-start="{" data-end="}">
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<div class="line"><a id="l00041" name="l00041"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a83b73b24715d8a0fc29811653bb7c9a6"> 41</a></span> <span class="keywordtype">bool</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">MaskedComposition::contains</a>(<span class="keyword">const</span> std::string &symbol)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00042" name="l00042"></a><span class="lineno"> 42</span> <span class="keywordflow">if</span> (!<a class="code hl_variable" href="namespacefourdst_1_1atomic.html#a3f619cc8f8b2cd718a4082c6adb0de90">atomic::species</a>.<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(symbol)) {</div>
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<div class="line"><a id="l00043" name="l00043"></a><span class="lineno"> 43</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unknown_symbol_error.html">exceptions::UnknownSymbolError</a>(<span class="stringliteral">"Cannot find species '"</span> + symbol + <span class="stringliteral">"' in base composition"</span>);</div>
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<div class="line"><a id="l00044" name="l00044"></a><span class="lineno"> 44</span> }</div>
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<div class="line"><a id="l00045" name="l00045"></a><span class="lineno"> 45</span> <span class="keyword">const</span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a>& species = <a class="code hl_variable" href="namespacefourdst_1_1atomic.html#a3f619cc8f8b2cd718a4082c6adb0de90">atomic::species</a>.at(symbol);</div>
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<div class="line"><a id="l00046" name="l00046"></a><span class="lineno"> 46</span> <span class="keywordflow">return</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(species);</div>
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<div class="line"><a id="l00047" name="l00047"></a><span class="lineno"> 47</span> }</div>
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</div>
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<div class="line"><a id="l00048" name="l00048"></a><span class="lineno"> 48</span> </div>
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<div class="foldopen" id="foldopen00049" data-start="{" data-end="}">
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<div class="line"><a id="l00049" name="l00049"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a44fddc3b8d34b76114afafbdc9b0ec6d"> 49</a></span> <span class="keyword">const</span> std::vector<atomic::Species>& <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a44fddc3b8d34b76114afafbdc9b0ec6d">MaskedComposition::getRegisteredSpecies</a>() const noexcept {</div>
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<div class="line"><a id="l00050" name="l00050"></a><span class="lineno"> 50</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>;</div>
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<div class="line"><a id="l00051" name="l00051"></a><span class="lineno"> 51</span> }</div>
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</div>
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<div class="line"><a id="l00052" name="l00052"></a><span class="lineno"> 52</span> </div>
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<div class="foldopen" id="foldopen00053" data-start="{" data-end="}">
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<div class="line"><a id="l00053" name="l00053"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a9b33507e9820b7fd55209d3624388077"> 53</a></span> std::set<std::string> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a9b33507e9820b7fd55209d3624388077">MaskedComposition::getRegisteredSymbols</a>() const noexcept {</div>
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<div class="line"><a id="l00054" name="l00054"></a><span class="lineno"> 54</span> std::set<std::string> symbols;</div>
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<div class="line"><a id="l00055" name="l00055"></a><span class="lineno"> 55</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00056" name="l00056"></a><span class="lineno"> 56</span> symbols.insert(std::string(species.name()));</div>
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<div class="line"><a id="l00057" name="l00057"></a><span class="lineno"> 57</span> }</div>
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<div class="line"><a id="l00058" name="l00058"></a><span class="lineno"> 58</span> <span class="keywordflow">return</span> symbols;</div>
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<div class="line"><a id="l00059" name="l00059"></a><span class="lineno"> 59</span> }</div>
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</div>
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<div class="line"><a id="l00060" name="l00060"></a><span class="lineno"> 60</span> </div>
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<div class="foldopen" id="foldopen00061" data-start="{" data-end="}">
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<div class="line"><a id="l00061" name="l00061"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a6b6c7a9ad6293558ddc8834d22f4bc62"> 61</a></span> <span class="keywordtype">size_t</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a6b6c7a9ad6293558ddc8834d22f4bc62">MaskedComposition::size</a>() const noexcept {</div>
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<div class="line"><a id="l00062" name="l00062"></a><span class="lineno"> 62</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.size();</div>
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<div class="line"><a id="l00063" name="l00063"></a><span class="lineno"> 63</span> }</div>
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</div>
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<div class="line"><a id="l00064" name="l00064"></a><span class="lineno"> 64</span> </div>
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<div class="foldopen" id="foldopen00065" data-start="{" data-end="}">
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<div class="line"><a id="l00065" name="l00065"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a2383b69a4b1dbe1c7be01bb826b06c07"> 65</a></span> std::unordered_map<atomic::Species, double> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2383b69a4b1dbe1c7be01bb826b06c07">MaskedComposition::getMassFraction</a>() const noexcept {</div>
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<div class="line"><a id="l00066" name="l00066"></a><span class="lineno"> 66</span> std::unordered_map<atomic::Species, double> massFractions;</div>
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<div class="line"><a id="l00067" name="l00067"></a><span class="lineno"> 67</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00068" name="l00068"></a><span class="lineno"> 68</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00069" name="l00069"></a><span class="lineno"> 69</span> massFractions[species] = <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a8c1a4cd69465ef5b65bea547ed919ca5">CompositionDecorator::getMassFraction</a>(species);</div>
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<div class="line"><a id="l00070" name="l00070"></a><span class="lineno"> 70</span> } <span class="keywordflow">else</span> {</div>
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<div class="line"><a id="l00071" name="l00071"></a><span class="lineno"> 71</span> massFractions[species] = 0.0;</div>
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<div class="line"><a id="l00072" name="l00072"></a><span class="lineno"> 72</span> }</div>
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<div class="line"><a id="l00073" name="l00073"></a><span class="lineno"> 73</span> }</div>
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<div class="line"><a id="l00074" name="l00074"></a><span class="lineno"> 74</span> <span class="keywordflow">return</span> massFractions;</div>
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<div class="line"><a id="l00075" name="l00075"></a><span class="lineno"> 75</span> }</div>
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</div>
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<div class="line"><a id="l00076" name="l00076"></a><span class="lineno"> 76</span> </div>
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<div class="foldopen" id="foldopen00077" data-start="{" data-end="}">
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<div class="line"><a id="l00077" name="l00077"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a2c299c44f385b65202ed0d475402562a"> 77</a></span> std::unordered_map<atomic::Species, double> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2c299c44f385b65202ed0d475402562a">MaskedComposition::getNumberFraction</a>() const noexcept {</div>
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<div class="line"><a id="l00078" name="l00078"></a><span class="lineno"> 78</span> std::unordered_map<atomic::Species, double> numberFractions;</div>
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<div class="line"><a id="l00079" name="l00079"></a><span class="lineno"> 79</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00080" name="l00080"></a><span class="lineno"> 80</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00081" name="l00081"></a><span class="lineno"> 81</span> numberFractions[species] = <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a66724877d66017bac3dc3cc784dda57c">CompositionDecorator::getNumberFraction</a>(species);</div>
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<div class="line"><a id="l00082" name="l00082"></a><span class="lineno"> 82</span> } <span class="keywordflow">else</span> {</div>
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<div class="line"><a id="l00083" name="l00083"></a><span class="lineno"> 83</span> numberFractions[species] = 0.0;</div>
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<div class="line"><a id="l00084" name="l00084"></a><span class="lineno"> 84</span> }</div>
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<div class="line"><a id="l00085" name="l00085"></a><span class="lineno"> 85</span> }</div>
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<div class="line"><a id="l00086" name="l00086"></a><span class="lineno"> 86</span> <span class="keywordflow">return</span> numberFractions;</div>
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<div class="line"><a id="l00087" name="l00087"></a><span class="lineno"> 87</span> }</div>
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</div>
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<div class="line"><a id="l00088" name="l00088"></a><span class="lineno"> 88</span> </div>
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<div class="foldopen" id="foldopen00089" data-start="{" data-end="}">
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<div class="line"><a id="l00089" name="l00089"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#ab2a8d9eb543eb712f9a0bbabcc94383a"> 89</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2383b69a4b1dbe1c7be01bb826b06c07">MaskedComposition::getMassFraction</a>(<span class="keyword">const</span> std::string &symbol)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00090" name="l00090"></a><span class="lineno"> 90</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(symbol)) {</div>
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<div class="line"><a id="l00091" name="l00091"></a><span class="lineno"> 91</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">exceptions::UnregisteredSymbolError</a>(<span class="stringliteral">"Species '"</span> + symbol + <span class="stringliteral">"' is not part of the active species in the MaskedComposition."</span>);</div>
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<div class="line"><a id="l00092" name="l00092"></a><span class="lineno"> 92</span> }</div>
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<div class="line"><a id="l00093" name="l00093"></a><span class="lineno"> 93</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(symbol)) {</div>
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<div class="line"><a id="l00094" name="l00094"></a><span class="lineno"> 94</span> <span class="keywordflow">return</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a8c1a4cd69465ef5b65bea547ed919ca5">CompositionDecorator::getMassFraction</a>(symbol);</div>
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<div class="line"><a id="l00095" name="l00095"></a><span class="lineno"> 95</span> } <span class="keywordflow">return</span> 0.0;</div>
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<div class="line"><a id="l00096" name="l00096"></a><span class="lineno"> 96</span> }</div>
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</div>
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<div class="foldopen" id="foldopen00097" data-start="{" data-end="}">
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<div class="line"><a id="l00097" name="l00097"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a81cab92e09924db1804e9b943611648a"> 97</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2383b69a4b1dbe1c7be01bb826b06c07">MaskedComposition::getMassFraction</a>(<span class="keyword">const</span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a> &species)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00098" name="l00098"></a><span class="lineno"> 98</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(species)) {</div>
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<div class="line"><a id="l00099" name="l00099"></a><span class="lineno"> 99</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">exceptions::UnregisteredSymbolError</a>(<span class="stringliteral">"Species '"</span> + std::string(species.<a class="code hl_function" href="structfourdst_1_1atomic_1_1_species.html#a1fcc01fc978b34ba2531117f10be6741">name</a>()) + <span class="stringliteral">"' is not part of the active species in the MaskedComposition."</span>);</div>
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<div class="line"><a id="l00100" name="l00100"></a><span class="lineno"> 100</span> }</div>
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<div class="line"><a id="l00101" name="l00101"></a><span class="lineno"> 101</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00102" name="l00102"></a><span class="lineno"> 102</span> <span class="keywordflow">return</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a8c1a4cd69465ef5b65bea547ed919ca5">CompositionDecorator::getMassFraction</a>(species);</div>
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<div class="line"><a id="l00103" name="l00103"></a><span class="lineno"> 103</span> } <span class="keywordflow">return</span> 0.0;</div>
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<div class="line"><a id="l00104" name="l00104"></a><span class="lineno"> 104</span> }</div>
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</div>
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<div class="foldopen" id="foldopen00105" data-start="{" data-end="}">
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<div class="line"><a id="l00105" name="l00105"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#af4f65f7cad735494aa5010cf0832f23b"> 105</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2c299c44f385b65202ed0d475402562a">MaskedComposition::getNumberFraction</a>(<span class="keyword">const</span> std::string &symbol)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00106" name="l00106"></a><span class="lineno"> 106</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(symbol)) {</div>
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|
<div class="line"><a id="l00107" name="l00107"></a><span class="lineno"> 107</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">exceptions::UnregisteredSymbolError</a>(<span class="stringliteral">"Species '"</span> + symbol + <span class="stringliteral">"' is not part of the active species in the MaskedComposition."</span>);</div>
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<div class="line"><a id="l00108" name="l00108"></a><span class="lineno"> 108</span> }</div>
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<div class="line"><a id="l00109" name="l00109"></a><span class="lineno"> 109</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(symbol)) {</div>
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<div class="line"><a id="l00110" name="l00110"></a><span class="lineno"> 110</span> <span class="keywordflow">return</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a66724877d66017bac3dc3cc784dda57c">CompositionDecorator::getNumberFraction</a>(symbol);</div>
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<div class="line"><a id="l00111" name="l00111"></a><span class="lineno"> 111</span> } <span class="keywordflow">return</span> 0.0;</div>
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<div class="line"><a id="l00112" name="l00112"></a><span class="lineno"> 112</span> }</div>
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</div>
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<div class="foldopen" id="foldopen00113" data-start="{" data-end="}">
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<div class="line"><a id="l00113" name="l00113"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a7cbb41a5b9e8d49c85bcbc821c3ff47e"> 113</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2c299c44f385b65202ed0d475402562a">MaskedComposition::getNumberFraction</a>(<span class="keyword">const</span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a> &species)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00114" name="l00114"></a><span class="lineno"> 114</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(species)) {</div>
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<div class="line"><a id="l00115" name="l00115"></a><span class="lineno"> 115</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">exceptions::UnregisteredSymbolError</a>(<span class="stringliteral">"Species '"</span> + std::string(species.<a class="code hl_function" href="structfourdst_1_1atomic_1_1_species.html#a1fcc01fc978b34ba2531117f10be6741">name</a>()) + <span class="stringliteral">"' is not part of the active species in the MaskedComposition."</span>);</div>
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<div class="line"><a id="l00116" name="l00116"></a><span class="lineno"> 116</span> }</div>
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<div class="line"><a id="l00117" name="l00117"></a><span class="lineno"> 117</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00118" name="l00118"></a><span class="lineno"> 118</span> <span class="keywordflow">return</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a66724877d66017bac3dc3cc784dda57c">CompositionDecorator::getNumberFraction</a>(species);</div>
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<div class="line"><a id="l00119" name="l00119"></a><span class="lineno"> 119</span> } <span class="keywordflow">return</span> 0.0;</div>
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<div class="line"><a id="l00120" name="l00120"></a><span class="lineno"> 120</span> }</div>
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</div>
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<div class="foldopen" id="foldopen00121" data-start="{" data-end="}">
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<div class="line"><a id="l00121" name="l00121"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a3064af4fb0b59dce5b484d5657d25506"> 121</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a3064af4fb0b59dce5b484d5657d25506">MaskedComposition::getMolarAbundance</a>(<span class="keyword">const</span> std::string &symbol)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00122" name="l00122"></a><span class="lineno"> 122</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(symbol)) {</div>
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<div class="line"><a id="l00123" name="l00123"></a><span class="lineno"> 123</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">exceptions::UnregisteredSymbolError</a>(<span class="stringliteral">"Species '"</span> + symbol + <span class="stringliteral">"' is not part of the active species in the MaskedComposition."</span>);</div>
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<div class="line"><a id="l00124" name="l00124"></a><span class="lineno"> 124</span> }</div>
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<div class="line"><a id="l00125" name="l00125"></a><span class="lineno"> 125</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(symbol)) {</div>
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<div class="line"><a id="l00126" name="l00126"></a><span class="lineno"> 126</span> <span class="keywordflow">return</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a0c46d440cafd9ae2d04589ece5fd41fb">CompositionDecorator::getMolarAbundance</a>(symbol);</div>
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<div class="line"><a id="l00127" name="l00127"></a><span class="lineno"> 127</span> } <span class="keywordflow">return</span> 0.0;</div>
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<div class="line"><a id="l00128" name="l00128"></a><span class="lineno"> 128</span> }</div>
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</div>
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<div class="foldopen" id="foldopen00129" data-start="{" data-end="}">
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<div class="line"><a id="l00129" name="l00129"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a9766e12e53e504aab985e46dc4e0d6d6"> 129</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a3064af4fb0b59dce5b484d5657d25506">MaskedComposition::getMolarAbundance</a>(<span class="keyword">const</span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a> &species)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00130" name="l00130"></a><span class="lineno"> 130</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(species)) {</div>
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<div class="line"><a id="l00131" name="l00131"></a><span class="lineno"> 131</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">exceptions::UnregisteredSymbolError</a>(<span class="stringliteral">"Species '"</span> + std::string(species.<a class="code hl_function" href="structfourdst_1_1atomic_1_1_species.html#a1fcc01fc978b34ba2531117f10be6741">name</a>()) + <span class="stringliteral">"' is not part of the active species in the MaskedComposition."</span>);</div>
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<div class="line"><a id="l00132" name="l00132"></a><span class="lineno"> 132</span> }</div>
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<div class="line"><a id="l00133" name="l00133"></a><span class="lineno"> 133</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00134" name="l00134"></a><span class="lineno"> 134</span> <span class="keywordflow">return</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a0c46d440cafd9ae2d04589ece5fd41fb">CompositionDecorator::getMolarAbundance</a>(species);</div>
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<div class="line"><a id="l00135" name="l00135"></a><span class="lineno"> 135</span> } <span class="keywordflow">return</span> 0.0;</div>
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<div class="line"><a id="l00136" name="l00136"></a><span class="lineno"> 136</span> }</div>
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</div>
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<div class="foldopen" id="foldopen00137" data-start="{" data-end="}">
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<div class="line"><a id="l00137" name="l00137"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a3f50005318f2aa7bf7c3cd5b1d2aef7a"> 137</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a3f50005318f2aa7bf7c3cd5b1d2aef7a">MaskedComposition::getMeanParticleMass</a>() const noexcept {</div>
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<div class="line"><a id="l00138" name="l00138"></a><span class="lineno"> 138</span> <span class="keywordtype">double</span> meanParticleMass = 0.0;</div>
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<div class="line"><a id="l00139" name="l00139"></a><span class="lineno"> 139</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00140" name="l00140"></a><span class="lineno"> 140</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00141" name="l00141"></a><span class="lineno"> 141</span> <span class="keyword">const</span> <span class="keywordtype">double</span> numberFraction = <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a66724877d66017bac3dc3cc784dda57c">CompositionDecorator::getNumberFraction</a>(species);</div>
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<div class="line"><a id="l00142" name="l00142"></a><span class="lineno"> 142</span> <span class="keyword">const</span> <span class="keywordtype">double</span> atomicMass = species.mass();</div>
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<div class="line"><a id="l00143" name="l00143"></a><span class="lineno"> 143</span> meanParticleMass += numberFraction * atomicMass;</div>
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<div class="line"><a id="l00144" name="l00144"></a><span class="lineno"> 144</span> }</div>
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<div class="line"><a id="l00145" name="l00145"></a><span class="lineno"> 145</span> }</div>
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<div class="line"><a id="l00146" name="l00146"></a><span class="lineno"> 146</span> <span class="keywordflow">return</span> meanParticleMass;</div>
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<div class="line"><a id="l00147" name="l00147"></a><span class="lineno"> 147</span> }</div>
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</div>
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<div class="line"><a id="l00148" name="l00148"></a><span class="lineno"> 148</span> </div>
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<div class="foldopen" id="foldopen00149" data-start="{" data-end="}">
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<div class="line"><a id="l00149" name="l00149"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a38fc871469f94b3c07ba18a00548085d"> 149</a></span> <span class="keywordtype">double</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a38fc871469f94b3c07ba18a00548085d">MaskedComposition::getElectronAbundance</a>() const noexcept {</div>
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<div class="line"><a id="l00150" name="l00150"></a><span class="lineno"> 150</span> <span class="keywordtype">double</span> Ye = 0.0;</div>
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<div class="line"><a id="l00151" name="l00151"></a><span class="lineno"> 151</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00152" name="l00152"></a><span class="lineno"> 152</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">CompositionDecorator::contains</a>(species)) {</div>
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<div class="line"><a id="l00153" name="l00153"></a><span class="lineno"> 153</span> Ye += <a class="code hl_function" href="classfourdst_1_1composition_1_1_composition_decorator.html#a0c46d440cafd9ae2d04589ece5fd41fb">CompositionDecorator::getMolarAbundance</a>(species) * species.z();</div>
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<div class="line"><a id="l00154" name="l00154"></a><span class="lineno"> 154</span> }</div>
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<div class="line"><a id="l00155" name="l00155"></a><span class="lineno"> 155</span> }</div>
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<div class="line"><a id="l00156" name="l00156"></a><span class="lineno"> 156</span> <span class="keywordflow">return</span> Ye;</div>
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<div class="line"><a id="l00157" name="l00157"></a><span class="lineno"> 157</span> }</div>
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</div>
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<div class="line"><a id="l00158" name="l00158"></a><span class="lineno"> 158</span> </div>
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<div class="foldopen" id="foldopen00159" data-start="{" data-end="}">
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<div class="line"><a id="l00159" name="l00159"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a7655d278224486e762d22d0501187f58"> 159</a></span> std::vector<double> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a7655d278224486e762d22d0501187f58">MaskedComposition::getMassFractionVector</a>() const noexcept {</div>
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<div class="line"><a id="l00160" name="l00160"></a><span class="lineno"> 160</span> std::vector<double> massFractions;</div>
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<div class="line"><a id="l00161" name="l00161"></a><span class="lineno"> 161</span> massFractions.reserve(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.size());</div>
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<div class="line"><a id="l00162" name="l00162"></a><span class="lineno"> 162</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00163" name="l00163"></a><span class="lineno"> 163</span> massFractions.push_back(<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2383b69a4b1dbe1c7be01bb826b06c07">getMassFraction</a>(species));</div>
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<div class="line"><a id="l00164" name="l00164"></a><span class="lineno"> 164</span> }</div>
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<div class="line"><a id="l00165" name="l00165"></a><span class="lineno"> 165</span> <span class="keywordflow">return</span> massFractions;</div>
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<div class="line"><a id="l00166" name="l00166"></a><span class="lineno"> 166</span> }</div>
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</div>
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<div class="line"><a id="l00167" name="l00167"></a><span class="lineno"> 167</span> </div>
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<div class="foldopen" id="foldopen00168" data-start="{" data-end="}">
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<div class="line"><a id="l00168" name="l00168"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#ad28b1f5c98bd25378c24c732d74deab4"> 168</a></span> std::vector<double> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#ad28b1f5c98bd25378c24c732d74deab4">MaskedComposition::getNumberFractionVector</a>() const noexcept {</div>
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<div class="line"><a id="l00169" name="l00169"></a><span class="lineno"> 169</span> std::vector<double> numberFractions;</div>
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<div class="line"><a id="l00170" name="l00170"></a><span class="lineno"> 170</span> numberFractions.reserve(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.size());</div>
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<div class="line"><a id="l00171" name="l00171"></a><span class="lineno"> 171</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00172" name="l00172"></a><span class="lineno"> 172</span> numberFractions.push_back(<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a2c299c44f385b65202ed0d475402562a">getNumberFraction</a>(species));</div>
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<div class="line"><a id="l00173" name="l00173"></a><span class="lineno"> 173</span> }</div>
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<div class="line"><a id="l00174" name="l00174"></a><span class="lineno"> 174</span> <span class="keywordflow">return</span> numberFractions;</div>
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<div class="line"><a id="l00175" name="l00175"></a><span class="lineno"> 175</span> }</div>
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</div>
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<div class="line"><a id="l00176" name="l00176"></a><span class="lineno"> 176</span> </div>
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<div class="foldopen" id="foldopen00177" data-start="{" data-end="}">
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<div class="line"><a id="l00177" name="l00177"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#ac2f827bedae5405ebab7108b2e4397c5"> 177</a></span> std::vector<double> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#ac2f827bedae5405ebab7108b2e4397c5">MaskedComposition::getMolarAbundanceVector</a>() const noexcept {</div>
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<div class="line"><a id="l00178" name="l00178"></a><span class="lineno"> 178</span> std::vector<double> molarAbundances;</div>
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<div class="line"><a id="l00179" name="l00179"></a><span class="lineno"> 179</span> molarAbundances.reserve(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.size());</div>
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<div class="line"><a id="l00180" name="l00180"></a><span class="lineno"> 180</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& species : <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>) {</div>
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<div class="line"><a id="l00181" name="l00181"></a><span class="lineno"> 181</span> molarAbundances.push_back(<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a3064af4fb0b59dce5b484d5657d25506">getMolarAbundance</a>(species));</div>
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<div class="line"><a id="l00182" name="l00182"></a><span class="lineno"> 182</span> }</div>
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<div class="line"><a id="l00183" name="l00183"></a><span class="lineno"> 183</span> <span class="keywordflow">return</span> molarAbundances;</div>
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<div class="line"><a id="l00184" name="l00184"></a><span class="lineno"> 184</span> }</div>
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</div>
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<div class="line"><a id="l00185" name="l00185"></a><span class="lineno"> 185</span> </div>
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<div class="foldopen" id="foldopen00186" data-start="{" data-end="}">
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<div class="line"><a id="l00186" name="l00186"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a7277650debc78e081963663557de73eb"> 186</a></span> <span class="keywordtype">size_t</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a7277650debc78e081963663557de73eb">MaskedComposition::getSpeciesIndex</a>(<span class="keyword">const</span> std::string &symbol)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00187" name="l00187"></a><span class="lineno"> 187</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">contains</a>(symbol)) {</div>
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<div class="line"><a id="l00188" name="l00188"></a><span class="lineno"> 188</span> <span class="keywordflow">throw</span> <a class="code hl_class" href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">exceptions::UnregisteredSymbolError</a>(<span class="stringliteral">"Species '"</span> + symbol + <span class="stringliteral">"' is not part of the active species in the MaskedComposition."</span>);</div>
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<div class="line"><a id="l00189" name="l00189"></a><span class="lineno"> 189</span> }</div>
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<div class="line"><a id="l00190" name="l00190"></a><span class="lineno"> 190</span> <span class="keywordflow">return</span> std::distance(</div>
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<div class="line"><a id="l00191" name="l00191"></a><span class="lineno"> 191</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.begin(),</div>
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<div class="line"><a id="l00192" name="l00192"></a><span class="lineno"> 192</span> std::ranges::find_if(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>,</div>
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<div class="line"><a id="l00193" name="l00193"></a><span class="lineno"> 193</span> [&symbol](<span class="keyword">const</span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a>& sp) {</div>
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<div class="line"><a id="l00194" name="l00194"></a><span class="lineno"> 194</span> return std::string(sp.name()) == symbol;</div>
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<div class="line"><a id="l00195" name="l00195"></a><span class="lineno"> 195</span> }));</div>
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<div class="line"><a id="l00196" name="l00196"></a><span class="lineno"> 196</span> }</div>
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</div>
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<div class="line"><a id="l00197" name="l00197"></a><span class="lineno"> 197</span> </div>
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<div class="foldopen" id="foldopen00198" data-start="{" data-end="}">
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<div class="line"><a id="l00198" name="l00198"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a395e5b14cd2a9f9d467fea25542f8ebd"> 198</a></span> <span class="keywordtype">size_t</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a7277650debc78e081963663557de73eb">MaskedComposition::getSpeciesIndex</a>(<span class="keyword">const</span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a> &species)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00199" name="l00199"></a><span class="lineno"> 199</span> <span class="keywordflow">return</span> std::distance(</div>
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<div class="line"><a id="l00200" name="l00200"></a><span class="lineno"> 200</span> <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.begin(),</div>
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<div class="line"><a id="l00201" name="l00201"></a><span class="lineno"> 201</span> std::ranges::find(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>, species)</div>
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<div class="line"><a id="l00202" name="l00202"></a><span class="lineno"> 202</span> );</div>
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<div class="line"><a id="l00203" name="l00203"></a><span class="lineno"> 203</span> }</div>
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</div>
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<div class="line"><a id="l00204" name="l00204"></a><span class="lineno"> 204</span> </div>
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<div class="foldopen" id="foldopen00205" data-start="{" data-end="}">
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<div class="line"><a id="l00205" name="l00205"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#acc9d3af0aad6c6209c9aefd94f86996b"> 205</a></span> <a class="code hl_struct" href="structfourdst_1_1atomic_1_1_species.html">atomic::Species</a> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#acc9d3af0aad6c6209c9aefd94f86996b">MaskedComposition::getSpeciesAtIndex</a>(<span class="keyword">const</span> <span class="keywordtype">size_t</span> index)<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00206" name="l00206"></a><span class="lineno"> 206</span> <span class="keywordflow">if</span> (index >= <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.size()) {</div>
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<div class="line"><a id="l00207" name="l00207"></a><span class="lineno"> 207</span> <span class="keywordflow">throw</span> std::out_of_range(<span class="stringliteral">"Index "</span> + std::to_string(index) + <span class="stringliteral">" is out of bounds for active species of size "</span> + std::to_string(<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.size()) + <span class="stringliteral">"."</span>);</div>
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<div class="line"><a id="l00208" name="l00208"></a><span class="lineno"> 208</span> }</div>
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<div class="line"><a id="l00209" name="l00209"></a><span class="lineno"> 209</span> <span class="keyword">auto</span> it = <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.begin();</div>
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<div class="line"><a id="l00210" name="l00210"></a><span class="lineno"> 210</span> std::advance(it, index);</div>
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<div class="line"><a id="l00211" name="l00211"></a><span class="lineno"> 211</span> <span class="keywordflow">return</span> *it;</div>
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<div class="line"><a id="l00212" name="l00212"></a><span class="lineno"> 212</span> }</div>
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</div>
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<div class="line"><a id="l00213" name="l00213"></a><span class="lineno"> 213</span> </div>
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<div class="foldopen" id="foldopen00214" data-start="{" data-end="}">
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<div class="line"><a id="l00214" name="l00214"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a30f89ba71d9db6ad330c645d0a161164"> 214</a></span> std::unique_ptr<CompositionAbstract> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a30f89ba71d9db6ad330c645d0a161164">MaskedComposition::clone</a>()<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00215" name="l00215"></a><span class="lineno"> 215</span> <span class="keywordflow">return</span> std::make_unique<MaskedComposition>(*<a class="code hl_variable" href="classfourdst_1_1composition_1_1_composition_decorator.html#a785a5aeddcc68ce3a5b688d956c4d505">m_base_composition</a>, <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>);</div>
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<div class="line"><a id="l00216" name="l00216"></a><span class="lineno"> 216</span> }</div>
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</div>
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<div class="line"><a id="l00217" name="l00217"></a><span class="lineno"> 217</span> </div>
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<div class="foldopen" id="foldopen00218" data-start="{" data-end="}">
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<div class="line"><a id="l00218" name="l00218"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#aa01637b823d0127736cdc767284eb28d"> 218</a></span> <a class="code hl_typedef" href="classfourdst_1_1composition_1_1_masked_composition.html#afe3129b1dbebfbe0578c3a555aa742bf">MaskedComposition::iterator</a> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#aa01637b823d0127736cdc767284eb28d">MaskedComposition::begin</a>() {</div>
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<div class="line"><a id="l00219" name="l00219"></a><span class="lineno"> 219</span> <span class="keywordflow">return</span> {<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.begin(), <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">m_molarAbundances</a>.begin()};</div>
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<div class="line"><a id="l00220" name="l00220"></a><span class="lineno"> 220</span> }</div>
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</div>
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<div class="line"><a id="l00221" name="l00221"></a><span class="lineno"> 221</span> </div>
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<div class="foldopen" id="foldopen00222" data-start="{" data-end="}">
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<div class="line"><a id="l00222" name="l00222"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#aae6a6799ee6877064728bd880348420d"> 222</a></span> <a class="code hl_typedef" href="classfourdst_1_1composition_1_1_masked_composition.html#afe3129b1dbebfbe0578c3a555aa742bf">MaskedComposition::iterator</a> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#aae6a6799ee6877064728bd880348420d">MaskedComposition::end</a>() {</div>
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<div class="line"><a id="l00223" name="l00223"></a><span class="lineno"> 223</span> <span class="keywordflow">return</span> {<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.end(), <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">m_molarAbundances</a>.end()};</div>
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<div class="line"><a id="l00224" name="l00224"></a><span class="lineno"> 224</span> }</div>
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</div>
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<div class="line"><a id="l00225" name="l00225"></a><span class="lineno"> 225</span> </div>
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<div class="foldopen" id="foldopen00226" data-start="{" data-end="}">
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<div class="line"><a id="l00226" name="l00226"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a047dae84149b92be5849c4294cd481de"> 226</a></span> <a class="code hl_typedef" href="classfourdst_1_1composition_1_1_masked_composition.html#acd2bbf05d4f5fce5a1146619a0b16b6d">MaskedComposition::const_iterator</a> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#aa01637b823d0127736cdc767284eb28d">MaskedComposition::begin</a>()<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00227" name="l00227"></a><span class="lineno"> 227</span> <span class="keywordflow">return</span> {<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.cbegin(), <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">m_molarAbundances</a>.cbegin()};</div>
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<div class="line"><a id="l00228" name="l00228"></a><span class="lineno"> 228</span> }</div>
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</div>
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<div class="line"><a id="l00229" name="l00229"></a><span class="lineno"> 229</span> </div>
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<div class="foldopen" id="foldopen00230" data-start="{" data-end="}">
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<div class="line"><a id="l00230" name="l00230"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a272b2164c1ad6efab7e86ed26efcbb96"> 230</a></span> <a class="code hl_typedef" href="classfourdst_1_1composition_1_1_masked_composition.html#acd2bbf05d4f5fce5a1146619a0b16b6d">MaskedComposition::const_iterator</a> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#aae6a6799ee6877064728bd880348420d">MaskedComposition::end</a>()<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00231" name="l00231"></a><span class="lineno"> 231</span> <span class="keywordflow">return</span> {<a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">m_activeSpecies</a>.cend(), <a class="code hl_variable" href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">m_molarAbundances</a>.cend()};</div>
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<div class="line"><a id="l00232" name="l00232"></a><span class="lineno"> 232</span> }</div>
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</div>
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<div class="line"><a id="l00233" name="l00233"></a><span class="lineno"> 233</span> </div>
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<div class="foldopen" id="foldopen00234" data-start="{" data-end="}">
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<div class="line"><a id="l00234" name="l00234"></a><span class="lineno"><a class="line" href="classfourdst_1_1composition_1_1_masked_composition.html#a0cff238d7aec2db1f7c509d199b56afb"> 234</a></span> <span class="keywordtype">size_t</span> <a class="code hl_function" href="classfourdst_1_1composition_1_1_masked_composition.html#a0cff238d7aec2db1f7c509d199b56afb">MaskedComposition::hash</a>()<span class="keyword"> const </span>{</div>
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<div class="line"><a id="l00235" name="l00235"></a><span class="lineno"> 235</span> <span class="keywordflow">return</span> <a class="code hl_function" href="structfourdst_1_1composition_1_1utils_1_1_composition_hash.html#af30bb4f60999d9ad99ad3893efa2de65">utils::CompositionHash::hash_exact<MaskedComposition></a>(*<span class="keyword">this</span>);</div>
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<div class="line"><a id="l00236" name="l00236"></a><span class="lineno"> 236</span> }</div>
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</div>
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<div class="line"><a id="l00237" name="l00237"></a><span class="lineno"> 237</span>};</div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_composition_abstract_html"><div class="ttname"><a href="classfourdst_1_1composition_1_1_composition_abstract.html">fourdst::composition::CompositionAbstract</a></div><div class="ttdoc">Abstract base class for chemical composition representations.</div><div class="ttdef"><b>Definition</b> <a href="composition__abstract_8h_source.html#l00036">composition_abstract.h:36</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_composition_decorator_html_a0c46d440cafd9ae2d04589ece5fd41fb"><div class="ttname"><a href="classfourdst_1_1composition_1_1_composition_decorator.html#a0c46d440cafd9ae2d04589ece5fd41fb">fourdst::composition::CompositionDecorator::getMolarAbundance</a></div><div class="ttdeci">double getMolarAbundance(const std::string &symbol) const override</div><div class="ttdoc">Get the molar abundance for a given symbol.</div><div class="ttdef"><b>Definition</b> <a href="composition__decorator__abstract_8h_source.html#l00030">composition_decorator_abstract.h:30</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_composition_decorator_html_a115e0c194a3dffddc558e0305cc56677"><div class="ttname"><a href="classfourdst_1_1composition_1_1_composition_decorator.html#a115e0c194a3dffddc558e0305cc56677">fourdst::composition::CompositionDecorator::CompositionDecorator</a></div><div class="ttdeci">CompositionDecorator(std::unique_ptr< CompositionAbstract > decorator)</div><div class="ttdef"><b>Definition</b> <a href="composition__decorator__abstract_8h_source.html#l00018">composition_decorator_abstract.h:18</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_composition_decorator_html_a66724877d66017bac3dc3cc784dda57c"><div class="ttname"><a href="classfourdst_1_1composition_1_1_composition_decorator.html#a66724877d66017bac3dc3cc784dda57c">fourdst::composition::CompositionDecorator::getNumberFraction</a></div><div class="ttdeci">std::unordered_map< atomic::Species, double > getNumberFraction() const noexcept override</div><div class="ttdoc">Get the number fraction for all registered symbols.</div><div class="ttdef"><b>Definition</b> <a href="composition__decorator__abstract_8h_source.html#l00025">composition_decorator_abstract.h:25</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_composition_decorator_html_a785a5aeddcc68ce3a5b688d956c4d505"><div class="ttname"><a href="classfourdst_1_1composition_1_1_composition_decorator.html#a785a5aeddcc68ce3a5b688d956c4d505">fourdst::composition::CompositionDecorator::m_base_composition</a></div><div class="ttdeci">std::unique_ptr< CompositionAbstract > m_base_composition</div><div class="ttdef"><b>Definition</b> <a href="composition__decorator__abstract_8h_source.html#l00047">composition_decorator_abstract.h:47</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_composition_decorator_html_a811e91b7cc08f19b8c92de43fdb91401"><div class="ttname"><a href="classfourdst_1_1composition_1_1_composition_decorator.html#a811e91b7cc08f19b8c92de43fdb91401">fourdst::composition::CompositionDecorator::contains</a></div><div class="ttdeci">bool contains(const atomic::Species &species) const noexcept override</div><div class="ttdoc">Check if the composition contains the given species.</div><div class="ttdef"><b>Definition</b> <a href="composition__decorator__abstract_8h_source.html#l00019">composition_decorator_abstract.h:19</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_composition_decorator_html_a8c1a4cd69465ef5b65bea547ed919ca5"><div class="ttname"><a href="classfourdst_1_1composition_1_1_composition_decorator.html#a8c1a4cd69465ef5b65bea547ed919ca5">fourdst::composition::CompositionDecorator::getMassFraction</a></div><div class="ttdeci">std::unordered_map< atomic::Species, double > getMassFraction() const noexcept override</div><div class="ttdoc">Get the mass fraction for all registered symbols.</div><div class="ttdef"><b>Definition</b> <a href="composition__decorator__abstract_8h_source.html#l00024">composition_decorator_abstract.h:24</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a045cfdf1e771895df872a6da61c53966"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a045cfdf1e771895df872a6da61c53966">fourdst::composition::MaskedComposition::contains</a></div><div class="ttdeci">bool contains(const atomic::Species &species) const noexcept override</div><div class="ttdoc">Check if the composition contains the given species.</div><div class="ttdef"><b>Definition</b> <a href="#l00037">composition_masked.cpp:37</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a0cff238d7aec2db1f7c509d199b56afb"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a0cff238d7aec2db1f7c509d199b56afb">fourdst::composition::MaskedComposition::hash</a></div><div class="ttdeci">size_t hash() const override</div><div class="ttdef"><b>Definition</b> <a href="#l00234">composition_masked.cpp:234</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a22a5b2ea210bb14a07b6461270631a3b"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a22a5b2ea210bb14a07b6461270631a3b">fourdst::composition::MaskedComposition::m_activeSpecies</a></div><div class="ttdeci">std::vector< atomic::Species > m_activeSpecies</div><div class="ttdef"><b>Definition</b> <a href="composition__masked_8h_source.html#l00065">composition_masked.h:65</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a2383b69a4b1dbe1c7be01bb826b06c07"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a2383b69a4b1dbe1c7be01bb826b06c07">fourdst::composition::MaskedComposition::getMassFraction</a></div><div class="ttdeci">std::unordered_map< atomic::Species, double > getMassFraction() const noexcept override</div><div class="ttdoc">Get the mass fraction for all registered symbols.</div><div class="ttdef"><b>Definition</b> <a href="#l00065">composition_masked.cpp:65</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a2c299c44f385b65202ed0d475402562a"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a2c299c44f385b65202ed0d475402562a">fourdst::composition::MaskedComposition::getNumberFraction</a></div><div class="ttdeci">std::unordered_map< atomic::Species, double > getNumberFraction() const noexcept override</div><div class="ttdoc">Get the number fraction for all registered symbols.</div><div class="ttdef"><b>Definition</b> <a href="#l00077">composition_masked.cpp:77</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a3064af4fb0b59dce5b484d5657d25506"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a3064af4fb0b59dce5b484d5657d25506">fourdst::composition::MaskedComposition::getMolarAbundance</a></div><div class="ttdeci">double getMolarAbundance(const std::string &symbol) const override</div><div class="ttdoc">Get the molar abundance for a given symbol.</div><div class="ttdef"><b>Definition</b> <a href="#l00121">composition_masked.cpp:121</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a30f89ba71d9db6ad330c645d0a161164"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a30f89ba71d9db6ad330c645d0a161164">fourdst::composition::MaskedComposition::clone</a></div><div class="ttdeci">std::unique_ptr< CompositionAbstract > clone() const override</div><div class="ttdef"><b>Definition</b> <a href="#l00214">composition_masked.cpp:214</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a38fc871469f94b3c07ba18a00548085d"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a38fc871469f94b3c07ba18a00548085d">fourdst::composition::MaskedComposition::getElectronAbundance</a></div><div class="ttdeci">double getElectronAbundance() const noexcept override</div><div class="ttdoc">Get the electron abundance of the composition.</div><div class="ttdef"><b>Definition</b> <a href="#l00149">composition_masked.cpp:149</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a3f50005318f2aa7bf7c3cd5b1d2aef7a"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a3f50005318f2aa7bf7c3cd5b1d2aef7a">fourdst::composition::MaskedComposition::getMeanParticleMass</a></div><div class="ttdeci">double getMeanParticleMass() const noexcept override</div><div class="ttdoc">Get the mean particle mass of the composition.</div><div class="ttdef"><b>Definition</b> <a href="#l00137">composition_masked.cpp:137</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a44fddc3b8d34b76114afafbdc9b0ec6d"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a44fddc3b8d34b76114afafbdc9b0ec6d">fourdst::composition::MaskedComposition::getRegisteredSpecies</a></div><div class="ttdeci">const std::vector< atomic::Species > & getRegisteredSpecies() const noexcept override</div><div class="ttdoc">Get all registered atomic species in the composition.</div><div class="ttdef"><b>Definition</b> <a href="#l00049">composition_masked.cpp:49</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a6b6c7a9ad6293558ddc8834d22f4bc62"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a6b6c7a9ad6293558ddc8834d22f4bc62">fourdst::composition::MaskedComposition::size</a></div><div class="ttdeci">size_t size() const noexcept override</div><div class="ttdef"><b>Definition</b> <a href="#l00061">composition_masked.cpp:61</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a7277650debc78e081963663557de73eb"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a7277650debc78e081963663557de73eb">fourdst::composition::MaskedComposition::getSpeciesIndex</a></div><div class="ttdeci">size_t getSpeciesIndex(const std::string &symbol) const override</div><div class="ttdoc">Get the index of a species by symbol.</div><div class="ttdef"><b>Definition</b> <a href="#l00186">composition_masked.cpp:186</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a7655d278224486e762d22d0501187f58"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a7655d278224486e762d22d0501187f58">fourdst::composition::MaskedComposition::getMassFractionVector</a></div><div class="ttdeci">std::vector< double > getMassFractionVector() const noexcept override</div><div class="ttdoc">Get the mass fraction as a vector.</div><div class="ttdef"><b>Definition</b> <a href="#l00159">composition_masked.cpp:159</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a9a0d839e4534494b7adaf353d56e5375"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a9a0d839e4534494b7adaf353d56e5375">fourdst::composition::MaskedComposition::MaskedComposition</a></div><div class="ttdeci">MaskedComposition(const CompositionAbstract &baseComposition, const std::vector< atomic::Species > &activeSpecies)</div><div class="ttdef"><b>Definition</b> <a href="#l00015">composition_masked.cpp:15</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_a9b33507e9820b7fd55209d3624388077"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#a9b33507e9820b7fd55209d3624388077">fourdst::composition::MaskedComposition::getRegisteredSymbols</a></div><div class="ttdeci">std::set< std::string > getRegisteredSymbols() const noexcept override</div><div class="ttdoc">Get all registered chemical symbols in the composition.</div><div class="ttdef"><b>Definition</b> <a href="#l00053">composition_masked.cpp:53</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_aa01637b823d0127736cdc767284eb28d"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#aa01637b823d0127736cdc767284eb28d">fourdst::composition::MaskedComposition::begin</a></div><div class="ttdeci">iterator begin() override</div><div class="ttdef"><b>Definition</b> <a href="#l00218">composition_masked.cpp:218</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_aae6a6799ee6877064728bd880348420d"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#aae6a6799ee6877064728bd880348420d">fourdst::composition::MaskedComposition::end</a></div><div class="ttdeci">iterator end() override</div><div class="ttdef"><b>Definition</b> <a href="#l00222">composition_masked.cpp:222</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_abe4e28b36230fa41c11c22e36aaa15e7"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#abe4e28b36230fa41c11c22e36aaa15e7">fourdst::composition::MaskedComposition::m_molarAbundances</a></div><div class="ttdeci">std::vector< double > m_molarAbundances</div><div class="ttdef"><b>Definition</b> <a href="composition__masked_8h_source.html#l00066">composition_masked.h:66</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_ac2f827bedae5405ebab7108b2e4397c5"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#ac2f827bedae5405ebab7108b2e4397c5">fourdst::composition::MaskedComposition::getMolarAbundanceVector</a></div><div class="ttdeci">std::vector< double > getMolarAbundanceVector() const noexcept override</div><div class="ttdoc">Get the molar abundance as a vector.</div><div class="ttdef"><b>Definition</b> <a href="#l00177">composition_masked.cpp:177</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_acc9d3af0aad6c6209c9aefd94f86996b"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#acc9d3af0aad6c6209c9aefd94f86996b">fourdst::composition::MaskedComposition::getSpeciesAtIndex</a></div><div class="ttdeci">atomic::Species getSpeciesAtIndex(size_t index) const override</div><div class="ttdoc">Get the species at a given index.</div><div class="ttdef"><b>Definition</b> <a href="#l00205">composition_masked.cpp:205</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_acd2bbf05d4f5fce5a1146619a0b16b6d"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#acd2bbf05d4f5fce5a1146619a0b16b6d">fourdst::composition::MaskedComposition::const_iterator</a></div><div class="ttdeci">detail::CompositionIterator< true > const_iterator</div><div class="ttdef"><b>Definition</b> <a href="composition__masked_8h_source.html#l00018">composition_masked.h:18</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_ad28b1f5c98bd25378c24c732d74deab4"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#ad28b1f5c98bd25378c24c732d74deab4">fourdst::composition::MaskedComposition::getNumberFractionVector</a></div><div class="ttdeci">std::vector< double > getNumberFractionVector() const noexcept override</div><div class="ttdoc">Get the number fraction as a vector.</div><div class="ttdef"><b>Definition</b> <a href="#l00168">composition_masked.cpp:168</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1_masked_composition_html_afe3129b1dbebfbe0578c3a555aa742bf"><div class="ttname"><a href="classfourdst_1_1composition_1_1_masked_composition.html#afe3129b1dbebfbe0578c3a555aa742bf">fourdst::composition::MaskedComposition::iterator</a></div><div class="ttdeci">detail::CompositionIterator< false > iterator</div><div class="ttdef"><b>Definition</b> <a href="composition__masked_8h_source.html#l00017">composition_masked.h:17</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1exceptions_1_1_unknown_symbol_error_html"><div class="ttname"><a href="classfourdst_1_1composition_1_1exceptions_1_1_unknown_symbol_error.html">fourdst::composition::exceptions::UnknownSymbolError</a></div><div class="ttdoc">Exception thrown when an unknown symbol is encountered.</div><div class="ttdef"><b>Definition</b> <a href="exceptions__composition_8h_source.html#l00078">exceptions_composition.h:78</a></div></div>
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<div class="ttc" id="aclassfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error_html"><div class="ttname"><a href="classfourdst_1_1composition_1_1exceptions_1_1_unregistered_symbol_error.html">fourdst::composition::exceptions::UnregisteredSymbolError</a></div><div class="ttdoc">Exception thrown when a symbol is used that has not been registered.</div><div class="ttdef"><b>Definition</b> <a href="exceptions__composition_8h_source.html#l00052">exceptions_composition.h:52</a></div></div>
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<div class="ttc" id="acomposition__hash_8h_html"><div class="ttname"><a href="composition__hash_8h.html">composition_hash.h</a></div></div>
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<div class="ttc" id="acomposition__masked_8h_html"><div class="ttname"><a href="composition__masked_8h.html">composition_masked.h</a></div></div>
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<div class="ttc" id="aexceptions__composition_8h_html"><div class="ttname"><a href="exceptions__composition_8h.html">exceptions_composition.h</a></div></div>
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<div class="ttc" id="anamespacefourdst_1_1atomic_html_a3f619cc8f8b2cd718a4082c6adb0de90"><div class="ttname"><a href="namespacefourdst_1_1atomic.html#a3f619cc8f8b2cd718a4082c6adb0de90">fourdst::atomic::species</a></div><div class="ttdeci">static const std::unordered_map< std::string, const Species & > species</div><div class="ttdoc">Map of species names to their corresponding Species objects.</div><div class="ttdef"><b>Definition</b> <a href="species_8h_source.html#l03579">species.h:3579</a></div></div>
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<div class="ttc" id="anamespacefourdst_1_1composition_html"><div class="ttname"><a href="namespacefourdst_1_1composition.html">fourdst::composition</a></div><div class="ttdoc">Utilities and types for representing and manipulating chemical compositions.</div></div>
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<div class="ttc" id="aspecies_8h_html"><div class="ttname"><a href="species_8h.html">species.h</a></div></div>
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<div class="ttc" id="astructfourdst_1_1atomic_1_1_species_html"><div class="ttname"><a href="structfourdst_1_1atomic_1_1_species.html">fourdst::atomic::Species</a></div><div class="ttdoc">Represents an atomic species (isotope) with its fundamental physical properties.</div><div class="ttdef"><b>Definition</b> <a href="atomic_species_8h_source.html#l00052">atomicSpecies.h:52</a></div></div>
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<div class="ttc" id="astructfourdst_1_1atomic_1_1_species_html_a1fcc01fc978b34ba2531117f10be6741"><div class="ttname"><a href="structfourdst_1_1atomic_1_1_species.html#a1fcc01fc978b34ba2531117f10be6741">fourdst::atomic::Species::name</a></div><div class="ttdeci">std::string_view name() const</div><div class="ttdoc">Gets the name of the species.</div><div class="ttdef"><b>Definition</b> <a href="atomic_species_8h_source.html#l00211">atomicSpecies.h:211</a></div></div>
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<div class="ttc" id="astructfourdst_1_1composition_1_1utils_1_1_composition_hash_html_af30bb4f60999d9ad99ad3893efa2de65"><div class="ttname"><a href="structfourdst_1_1composition_1_1utils_1_1_composition_hash.html#af30bb4f60999d9ad99ad3893efa2de65">fourdst::composition::utils::CompositionHash::hash_exact</a></div><div class="ttdeci">static uint64_t hash_exact(const CompositionT &comp)</div><div class="ttdef"><b>Definition</b> <a href="composition__hash_8h_source.html#l00018">composition_hash.h:18</a></div></div>
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