83 Commits

Author SHA1 Message Date
30da87c74c docs(docs): rebuilt docs 2026-06-12 10:49:27 -04:00
997c845b3d fix(atomic): fixed atomic header install location 2026-06-12 10:37:01 -04:00
0431e0c7de fix(rpath): fixed macos RPATH issue 2026-06-11 12:20:32 -04:00
342eb90068 fix(sources): removed redundant sources
this leads to a duplicate symbol bug
2026-06-11 11:22:41 -04:00
82428f9e6e build(meson): more robust python version building 2026-06-11 10:55:15 -04:00
404b0bd757 build(header_install_dir): added header_install_dir option
this option is useful for wheel builds
2026-06-11 09:28:36 -04:00
4ae1e30b97 build(lib_install_dir): added lib_install_dir option
this is useful for wheel builds
2026-06-11 09:00:41 -04:00
3e3b7ad5b1 feat(standard-abundances): added raw data accessor 2026-06-11 07:31:03 -04:00
c12dc2c853 fix(standard-compositions): removed print statements which fail on gcc builds
also update rpaths in pc
2026-06-10 15:06:21 -04:00
3d38580706 fix(utils): updated utils header path 2026-06-10 14:17:58 -04:00
46b7a12fe7 build(headers): installing headers to correct location 2026-06-08 09:08:11 -04:00
21dd26dd86 Merge(PR/10): Merged PR 10 changes 2026-06-08 09:07:08 -04:00
poojanagrawal
ee7470f969 fix(standard_compositions.cpp): found and fixed h and he leaking out of the composition data
added a check for H and He getting added to SpeciesObject and cleaned up some variable names  and filenames
2026-06-05 22:47:15 +02:00
50a5c2cd06 MERGE: Merge standard abundances branch with updated install rules branch 2026-06-05 10:23:53 +02:00
poojanagrawal
376df477e3 fix(Standard-Compositions): fixed the compositions that were not working 2026-06-04 13:53:35 +02:00
poojanagrawal
a7389fcfce fix(standard-compositions): completed the calculations of mass fractions
Moved the abundance calculations to its own function instead of main, fixed calulations of mass fractions
2026-06-03 13:49:35 +02:00
5ae76be756 test(tests): Standard Solar Composition Unit Tests
Added first basic unit test to ensure all standard solar compositions can load. Not currently passing
2026-06-03 13:28:48 +02:00
1619eba529 feat(standard_compositions): added working enum overloads
also added docs
2026-06-03 11:59:54 +02:00
3d2eb46d0d feat(sandbox): added example input params 2026-06-02 17:02:19 +02:00
22083d5d11 feat(standard_composition): Enum overload for compositions
Added additional overloads to allow typesafe and compile time checking of requested composition
2026-06-02 16:22:18 +02:00
poojanagrawal
663bdcea03 feat(Standard-Compositions): Imported standard metal fractions from MESA
Imported standard metal fractions from MESA to build compositions from one of the standard schemes
2026-06-02 15:57:33 +02:00
1a5bd2b32c fix(gcc): static_cast long int -> size_t for comparision
address IDB warnings in gcc build
2025-12-22 07:39:59 -05:00
284e8cd10a perf(Composition): Internally switched from map -> vector
This brings a major performance improvment as all memory is contiguous
on the heap rather than spread around.
2025-12-08 11:31:46 -05:00
184df676ca perf(hashing): Much faster hash algorithm
For compositions we have implimented a much faster hashing algorithm
2025-12-07 09:41:58 -05:00
51c6a97b47 fix(cache): Cache properly clears
Cache now clears properly when setting molar abundances
2025-12-07 07:52:08 -05:00
75ba6c8456 perf(hash): Hash caching
added ability for composition to stash their own hash values
2025-12-07 07:47:32 -05:00
ae4b2119d8 fix(unity): fixed name conflict in unity builds
getSpecies was defined in two translation units. This was not an issue
for regular builds but broke unity builds. this has been refactored to a
single function in utils.h
2025-11-28 11:42:13 -05:00
6da4818ff4 fix(gcc): Fixed broken include paths
GCC is more strict with header includes. Fixed some of these so that libcomposition compiled on linux with a gcc toolchain
2025-11-27 17:40:32 -05:00
522d766bc2 feat(composition): added map overloads 2025-11-25 11:27:45 -05:00
408dd71eee feat(composition-hash): added robust hashed for compositions
also added ability to use Compositions as a std::hash in unordered_* types. Further added a constructor to build a Composition from a const CompositionAbstract&
2025-11-12 15:21:33 -05:00
2492b5f652 feat(MaskedComposition): added MaskedComposition to libcomposition
MaskedComposition is a generally useful decorator, therefore instead of forcing callers to impliment it on their own, we have implimented it as part of libcomposition
2025-11-10 08:47:35 -05:00
71e9269837 feat(CompositionAbstract): added clone and iterator methods to the CompositionAbstract Interface 2025-11-09 09:51:29 -05:00
31407c91f7 feat(CompositionDecorator): added composition decorator
It is sometimes useful for callers to be able to create new composition objects without overloading all the required methods. The CompositionDecorator acts as a simple translation layer which will pass any calls to virtual methods down to the next level of the composition stack (other than those which may have been overloaded by the caller)
2025-11-09 07:42:03 -05:00
49bfb5eff1 fix(CompositionAbstract): Moved CompositionAbstract into correct namespace
Further, added the composition_abstract header file to the correct install path
2025-11-09 06:59:38 -05:00
acff543b2d docs(docs): updated docs and readme 2025-11-08 10:00:16 -05:00
576b99e719 build(meson.build): fixed required header check
build validation stage was looking at the old path for atomic headers, updated this
2025-11-08 07:08:52 -05:00
7a303b8d3a docs(fourdst::composition-and-fourdst::atomic): update documentation 2025-11-08 06:42:41 -05:00
84947a2b12 feat(composition): changed how composition is conmstructed
Composition objects now must be built from vectors of molar abundances.  Things such as mass fraction and number fraction are computed on the fly (with some caching for performance). This will allow for many fewer issues when converting from solver space to composition space.

BREAKING CHANGE: The entire old API has been broken. There is no longer any need to finalize. In fact the entire concept of finalization has been removed. Further, the entire CompositionEntry and GlobalComposition data structure has been removed. Any code written for the old version will no longer work and major reworking will be needed to use the new version.
2025-11-07 15:49:25 -05:00
b8dc4ad8a5 perf(Composition): improved static correctness 2025-10-22 10:35:49 -04:00
19c78ff241 perf(Composition): changed logger aquisition to static to prevent each Composition object from needing to instantiate a logger whenever its built 2025-10-22 10:32:50 -04:00
36849783f5 perf(CompositionEntry): made symbol and isotope std::optional for comopsition entry so that construction can be cheaper 2025-10-22 10:12:59 -04:00
5baa671ddd docs(libcomposition): added more docstrings 2025-10-12 10:21:28 -04:00
0ef3b1a195 feat(Composition): Composition now inherits from abstract base class
The composition object is now a specialization of the abstract base CompositionAbstract. This interface enforces getters but not setters (those are left up to children). The intention here is that other code can specialize particular getters for cases where special handling (like unrestricted amounts of one species) are required.
2025-10-12 10:12:49 -04:00
1fd329a072 perf(az_to_species): marked noexcept
includes a version bump from v1.8.1 -> v1.8.2
2025-10-09 07:04:35 -04:00
f539e498b8 feat(az_to_species): az_to_species now returns an expected and error type
this will allow for much easier checking if a particular a,z pair actually exists
2025-10-08 15:17:33 -04:00
5fba54c1a2 feat(Added-ability-to-get-electron-abundance-and-fixed-some-conversion-bugs): Now Ye can be retrived directly from the composition object. Further a bug which prevented proper conversion to and from number or mass frac modes without messing up the numbers has been resolved 2025-10-06 14:29:33 -04:00
539c3b567e feat(composition): added uniform tools to get vector representation of mass fraction, number fraction, and molar abundance
this is useful for external tools that need to ensure uniformity in which species are at what index in a vector representation
2025-09-16 11:23:01 -04:00
b94d9b456f feat(species-lookup): added function to get species from a and z 2025-08-13 13:07:49 -04:00
9f5ef7fd6a docs(docs): added robust docs 2025-07-24 09:35:52 -04:00
e8e69f00c7 feat(composition): added more expressive errors 2025-07-21 07:48:00 -04:00