diff --git a/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.html b/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.html index e7ed69a..45c78cc 100644 --- a/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.html +++ b/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.html @@ -102,6 +102,8 @@ Files file  DObject.cpp  Implementation of the DObject class.
  +file  LockableDObject.cpp +  file  Metadata.cpp  Implementation of the Metadata class used in the dobj module.
  diff --git a/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.js b/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.js index 1269c86..6959778 100644 --- a/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.js +++ b/docs/html/dir_4e6f6de88c62da29e0ddd0d8e63af038.js @@ -1,5 +1,6 @@ var dir_4e6f6de88c62da29e0ddd0d8e63af038 = [ [ "DObject.cpp", "DObject_8cpp.html", "DObject_8cpp" ], + [ "LockableDObject.cpp", "LockableDObject_8cpp.html", null ], [ "Metadata.cpp", "Metadata_8cpp.html", "Metadata_8cpp" ] ]; \ No newline at end of file diff --git a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html index da4948a..3aaedcd 100644 --- a/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html +++ b/docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html @@ -96,6 +96,18 @@ $(document).ready(function(){initNavTree('dir_68267d1309a1af8e8297ef4c3efbcdba.h
src Directory Reference
+ + + + + + + + + + +

+Directories

directory  const
 
directory  dobj
 
directory  opac
 
directory  opatIO
 
diff --git a/docs/html/dir_768194193337d64eaa7edd2c5f5038a4.html b/docs/html/dir_768194193337d64eaa7edd2c5f5038a4.html index fd2ea4f..9da54d9 100644 --- a/docs/html/dir_768194193337d64eaa7edd2c5f5038a4.html +++ b/docs/html/dir_768194193337d64eaa7edd2c5f5038a4.html @@ -99,6 +99,10 @@ $(document).ready(function(){initNavTree('dir_768194193337d64eaa7edd2c5f5038a4.h + + + +

Directories

directory  private
 
directory  public
 
diff --git a/docs/html/files.html b/docs/html/files.html index 4ade754..32dc4ec 100644 --- a/docs/html/files.html +++ b/docs/html/files.html @@ -96,35 +96,57 @@ $(document).ready(function(){initNavTree('files.html',''); initResizable(); });
File List
-
Here is a list of all documented files with brief descriptions:
-
[detail level 1234]
+
Here is a list of all files with brief descriptions:
+
[detail level 1234567]
- - + + + + - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
 ▼ src
 ▼ const
 ▼ public
 const.h
 ▼ private
 const.cpp
 ▼ public
 const.h
 ▼ dobj
 ▼ private
 DObject.cppImplementation of the DObject class
 Metadata.cppImplementation of the Metadata class used in the dobj module
 ▼ public
 DObject.hDefines the DObject class, a universal data container for the project
 LockableDObject.hA lightweight wrapper for DObject that adds locking capabilities
 Metadata.hPublic interface for the Metadata class used in the dobj module
 ▼ opac
 ▼ public
 opac.h
 ▼ opatIO
 ▼ public
 opatIO.h
 ▼ tests
 ▼ const
 constTest.cppUnit tests for the const class
 ▼ dobj
 DObjectTest.cppUnit tests for the DObject class
 LockableDObjectTest.cppUnit tests for the LockableDObject class
 MetadataTest.cppUnit tests and integration tests for the Metadata class
 ▼ opatIO
 opatIOTest.cppUnit tests for the OpatIO class and associated structs
 LockableDObject.cpp
 Metadata.cppImplementation of the Metadata class used in the dobj module
 ▼ public
 DObject.hDefines the DObject class, a universal data container for the project
 LockableDObject.hA lightweight wrapper for DObject that adds locking capabilities
 Metadata.hPublic interface for the Metadata class used in the dobj module
 ▼ opac
 ▼ public
 opac.h
 ▼ opatIO
 ▼ private
 opatIO.cpp
 ▼ public
 opatIO.h
 ▼ tests
 ▼ const
 constTest.cppUnit tests for the const class
 ▼ dobj
 DObjectTest.cppUnit tests for the DObject class
 LockableDObjectTest.cppUnit tests for the LockableDObject class
 MetadataTest.cppUnit tests and integration tests for the Metadata class
 ▼ dobj_sandbox
 testDObject.cpp
 ▼ opatIO
 opatIOTest.cppUnit tests for the OpatIO class and associated structs
 ▼ utils
 ▼ opatio
 ▼ build
 ▼ lib
 ▼ opatio
 ▼ opat
 __init__.py
 opat.py
 __init__.py
 ▼ src
 ▼ opatio
 ▼ opat
 __init__.py
 opat.py
 __init__.py
diff --git a/docs/html/files_dup.js b/docs/html/files_dup.js index e47e81a..ae2945d 100644 --- a/docs/html/files_dup.js +++ b/docs/html/files_dup.js @@ -1,5 +1,6 @@ var files_dup = [ [ "src", "dir_68267d1309a1af8e8297ef4c3efbcdba.html", "dir_68267d1309a1af8e8297ef4c3efbcdba" ], - [ "tests", "dir_59425e443f801f1f2fd8bbe4959a3ccf.html", "dir_59425e443f801f1f2fd8bbe4959a3ccf" ] + [ "tests", "dir_59425e443f801f1f2fd8bbe4959a3ccf.html", "dir_59425e443f801f1f2fd8bbe4959a3ccf" ], + [ "utils", "dir_cbdb8362360e11eafe2fa3bc74cf0ffd.html", "dir_cbdb8362360e11eafe2fa3bc74cf0ffd" ] ]; \ No newline at end of file diff --git a/docs/html/functions.html b/docs/html/functions.html index b3cae26..1e25598 100644 --- a/docs/html/functions.html +++ b/docs/html/functions.html @@ -92,7 +92,7 @@ $(document).ready(function(){initNavTree('functions.html',''); initResizable();
-
Here is a list of all documented class members with links to the class documentation for each member:
+
Here is a list of all class members with links to the classes they belong to:

- b -

+

- t -

+ +

- u -

+ + +

- t -

diff --git a/docs/html/globals.html b/docs/html/globals.html index 3704e10..4034430 100644 --- a/docs/html/globals.html +++ b/docs/html/globals.html @@ -92,20 +92,65 @@ $(document).ready(function(){initNavTree('globals.html',''); initResizable(); })
-
Here is a list of all documented file members with links to the documentation:
diff --git a/docs/html/globals_func.html b/docs/html/globals_func.html index 5ea1bae..9a13933 100644 --- a/docs/html/globals_func.html +++ b/docs/html/globals_func.html @@ -92,20 +92,52 @@ $(document).ready(function(){initNavTree('globals_func.html',''); initResizable(
- 
diff --git a/docs/html/navtreedata.js b/docs/html/navtreedata.js index c7b4bc4..8523d97 100644 --- a/docs/html/navtreedata.js +++ b/docs/html/navtreedata.js @@ -25,6 +25,11 @@ var NAVTREE = [ [ "New 4DSSE Code", "index.html", [ + [ "opatIO python module", "md_utils_opatio_readme.html", [ + [ "Installation", "md_utils_opatio_readme.html#autotoc_md1", null ], + [ "General Usage", "md_utils_opatio_readme.html#autotoc_md2", null ], + [ "Problems", "md_utils_opatio_readme.html#autotoc_md3", null ] + ] ], [ "Test List", "test.html", null ], [ "Classes", "annotated.html", [ [ "Class List", "annotated.html", "annotated_dup" ], @@ -42,7 +47,9 @@ var NAVTREE = [ "File List", "files.html", "files_dup" ], [ "File Members", "globals.html", [ [ "All", "globals.html", null ], - [ "Functions", "globals_func.html", null ] + [ "Functions", "globals_func.html", null ], + [ "Variables", "globals_vars.html", null ], + [ "Macros", "globals_defs.html", null ] ] ] ] ] ] ] diff --git 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['lockabledobject_183',['LockableDObject',['../classLockableDObject.html#ae1a174a2740fa053626fe2820ee0efee',1,'LockableDObject']]], + ['lookupclosesttableid_184',['lookupClosestTableID',['../classOpatIO.html#af870ebd76bef969fa1f7c8270ac25cd8',1,'OpatIO']]], + ['lookuptableid_185',['lookupTableID',['../classOpatIO.html#a37959ed6845e09302bb8c206e3e006e4',1,'OpatIO']]] ]; diff --git a/docs/html/search/functions_7.js b/docs/html/search/functions_7.js index 4b49a83..89d13c9 100644 --- a/docs/html/search/functions_7.js +++ b/docs/html/search/functions_7.js @@ -1,4 +1,5 @@ var searchData= [ - ['metadata_150',['Metadata',['../classMetadata.html#ae849560667461008cb72e83919c20be0',1,'Metadata::Metadata()=default'],['../classMetadata.html#a3d56c8c5adee4b8c7d2089802211522b',1,'Metadata::Metadata(std::size_t byteSize, std::string dataType, std::vector< std::size_t > dimensions, bool debugFlag=false)']]] + ['main_186',['main',['../testDObject_8cpp.html#ae66f6b31b5ad750f1fe042a706a4e3d4',1,'testDObject.cpp']]], + ['metadata_187',['Metadata',['../classMetadata.html#ae849560667461008cb72e83919c20be0',1,'Metadata::Metadata()=default'],['../classMetadata.html#a3d56c8c5adee4b8c7d2089802211522b',1,'Metadata::Metadata(std::size_t byteSize, std::string dataType, std::vector< std::size_t > dimensions, bool debugFlag=false)']]] ]; diff --git a/docs/html/search/functions_8.js b/docs/html/search/functions_8.js index f0f0e54..825365b 100644 --- a/docs/html/search/functions_8.js +++ b/docs/html/search/functions_8.js @@ -1,6 +1,6 @@ var searchData= [ - ['opatio_151',['OpatIO',['../classOpatIO.html#a7f3436b3ac0dbe141b08d8064550f1b3',1,'OpatIO::OpatIO()'],['../classOpatIO.html#ae24b6a4f78529c4fe4719ea5438d5ed6',1,'OpatIO::OpatIO(std::string filename)']]], - ['operator_3c_3c_152',['operator<<',['../DObject_8cpp.html#a5b2896a287295bf59a0b9e4d0af21161',1,'operator<<(std::ostream &os, const DObject 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--- a/docs/html/search/related_0.js +++ b/docs/html/search/related_0.js @@ -1,4 +1,4 @@ var searchData= [ - ['operator_3c_3c_200',['operator<<',['../structConstant.html#ad298f7af7cdfd2e2267fd9e464558e2b',1,'Constant::operator<<()'],['../classDObject.html#a5b2896a287295bf59a0b9e4d0af21161',1,'DObject::operator<<()'],['../classMetadata.html#a9bc49cc23da2d1ff8b3e197630b9dfd2',1,'Metadata::operator<<()']]] + ['operator_3c_3c_247',['operator<<',['../structConstant.html#ad298f7af7cdfd2e2267fd9e464558e2b',1,'Constant::operator<<()'],['../classDObject.html#a5b2896a287295bf59a0b9e4d0af21161',1,'DObject::operator<<()'],['../classMetadata.html#a9bc49cc23da2d1ff8b3e197630b9dfd2',1,'Metadata::operator<<()']]] ]; diff --git a/docs/html/search/searchdata.js b/docs/html/search/searchdata.js index 95e74fb..759406a 100644 --- a/docs/html/search/searchdata.js +++ b/docs/html/search/searchdata.js @@ -1,13 +1,14 @@ var indexSectionsWithContent = { - 0: "bcdghiklmnoprstuvxz~", + 0: "_bcdeghiklmnoprstuvxz~", 1: "cdhlmot", - 2: "cdlmo", + 2: "_cdlmort", 3: "cdghiklmoprstu~", - 4: "bchilmnrsuvxz", + 4: "bcdehilmnorsuvxz", 5: "dp", 6: "o", - 7: "t" + 7: "e", + 8: "ot" }; var indexSectionNames = @@ -19,7 +20,8 @@ var indexSectionNames = 4: "variables", 5: "typedefs", 6: "related", - 7: "pages" + 7: "defines", + 8: "pages" }; var indexSectionLabels = @@ -31,6 +33,7 @@ var indexSectionLabels = 4: "Variables", 5: "Typedefs", 6: "Friends", - 7: "Pages" + 7: "Macros", + 8: "Pages" }; diff --git a/docs/html/search/typedefs_0.js b/docs/html/search/typedefs_0.js index 6438974..a5090f1 100644 --- a/docs/html/search/typedefs_0.js +++ b/docs/html/search/typedefs_0.js @@ -1,4 +1,4 @@ var searchData= [ - ['datatype_198',['DataType',['../classDObject.html#a79a2ecac4130ef3df272bdfeed26a620',1,'DObject']]] + ['datatype_245',['DataType',['../classDObject.html#a79a2ecac4130ef3df272bdfeed26a620',1,'DObject']]] ]; diff --git a/docs/html/search/typedefs_1.js b/docs/html/search/typedefs_1.js index cba1077..4c61099 100644 --- a/docs/html/search/typedefs_1.js +++ b/docs/html/search/typedefs_1.js @@ -1,4 +1,4 @@ var searchData= [ - ['plugin_199',['Plugin',['../classDObject.html#af11334d08ef85c68b3aae7554548e5a7',1,'DObject']]] + ['plugin_246',['Plugin',['../classDObject.html#af11334d08ef85c68b3aae7554548e5a7',1,'DObject']]] ]; diff --git a/docs/latex/files.tex b/docs/latex/files.tex index 400c489..8c6e34f 100644 --- a/docs/latex/files.tex +++ b/docs/latex/files.tex @@ -1,16 +1,26 @@ \doxysection{File List} -Here is a list of all documented files with brief descriptions\+:\begin{DoxyCompactList} -\item\contentsline{section}{src/const/public/{\bfseries const.\+h} }{\pageref{const_8h}}{} +Here is a list of all files with brief descriptions\+:\begin{DoxyCompactList} +\item\contentsline{section}{src/const/private/\mbox{\hyperlink{const_8cpp}{const.\+cpp}} }{\pageref{const_8cpp}}{} +\item\contentsline{section}{src/const/public/\mbox{\hyperlink{const_8h}{const.\+h}} }{\pageref{const_8h}}{} \item\contentsline{section}{src/dobj/private/\mbox{\hyperlink{DObject_8cpp}{DObject.\+cpp}} \\*Implementation of the \mbox{\hyperlink{classDObject}{DObject}} class }{\pageref{DObject_8cpp}}{} +\item\contentsline{section}{src/dobj/private/\mbox{\hyperlink{LockableDObject_8cpp}{Lockable\+DObject.\+cpp}} }{\pageref{LockableDObject_8cpp}}{} \item\contentsline{section}{src/dobj/private/\mbox{\hyperlink{Metadata_8cpp}{Metadata.\+cpp}} \\*Implementation of the \mbox{\hyperlink{classMetadata}{Metadata}} class used in the dobj module }{\pageref{Metadata_8cpp}}{} \item\contentsline{section}{src/dobj/public/\mbox{\hyperlink{DObject_8h}{DObject.\+h}} \\*Defines the \mbox{\hyperlink{classDObject}{DObject}} class, a universal data container for the project }{\pageref{DObject_8h}}{} \item\contentsline{section}{src/dobj/public/\mbox{\hyperlink{LockableDObject_8h}{Lockable\+DObject.\+h}} \\*A lightweight wrapper for \mbox{\hyperlink{classDObject}{DObject}} that adds locking capabilities }{\pageref{LockableDObject_8h}}{} \item\contentsline{section}{src/dobj/public/\mbox{\hyperlink{Metadata_8h}{Metadata.\+h}} \\*Public interface for the \mbox{\hyperlink{classMetadata}{Metadata}} class used in the dobj module }{\pageref{Metadata_8h}}{} -\item\contentsline{section}{src/opac/public/{\bfseries opac.\+h} }{\pageref{opac_8h}}{} -\item\contentsline{section}{src/opat\+IO/public/{\bfseries opat\+IO.\+h} }{\pageref{opatIO_8h}}{} +\item\contentsline{section}{src/opac/public/\mbox{\hyperlink{opac_8h}{opac.\+h}} }{\pageref{opac_8h}}{} +\item\contentsline{section}{src/opat\+IO/private/\mbox{\hyperlink{opatIO_8cpp}{opat\+IO.\+cpp}} }{\pageref{opatIO_8cpp}}{} +\item\contentsline{section}{src/opat\+IO/public/\mbox{\hyperlink{opatIO_8h}{opat\+IO.\+h}} }{\pageref{opatIO_8h}}{} \item\contentsline{section}{tests/const/\mbox{\hyperlink{constTest_8cpp}{const\+Test.\+cpp}} \\*Unit tests for the const class }{\pageref{constTest_8cpp}}{} \item\contentsline{section}{tests/dobj/\mbox{\hyperlink{DObjectTest_8cpp}{DObject\+Test.\+cpp}} \\*Unit tests for the \mbox{\hyperlink{classDObject}{DObject}} class }{\pageref{DObjectTest_8cpp}}{} \item\contentsline{section}{tests/dobj/\mbox{\hyperlink{LockableDObjectTest_8cpp}{Lockable\+DObject\+Test.\+cpp}} \\*Unit tests for the \mbox{\hyperlink{classLockableDObject}{Lockable\+DObject}} class }{\pageref{LockableDObjectTest_8cpp}}{} \item\contentsline{section}{tests/dobj/\mbox{\hyperlink{MetadataTest_8cpp}{Metadata\+Test.\+cpp}} \\*Unit tests and integration tests for the \mbox{\hyperlink{classMetadata}{Metadata}} class }{\pageref{MetadataTest_8cpp}}{} +\item\contentsline{section}{tests/dobj\+\_\+sandbox/\mbox{\hyperlink{testDObject_8cpp}{test\+DObject.\+cpp}} }{\pageref{testDObject_8cpp}}{} \item\contentsline{section}{tests/opat\+IO/\mbox{\hyperlink{opatIOTest_8cpp}{opat\+IOTest.\+cpp}} \\*Unit tests for the \mbox{\hyperlink{classOpatIO}{Opat\+IO}} class and associated structs }{\pageref{opatIOTest_8cpp}}{} +\item\contentsline{section}{utils/opatio/build/lib/opatio/\mbox{\hyperlink{build_2lib_2opatio_2____init_____8py}{\+\_\+\+\_\+init\+\_\+\+\_\+.\+py}} }{\pageref{build_2lib_2opatio_2____init_____8py}}{} +\item\contentsline{section}{utils/opatio/build/lib/opatio/opat/\mbox{\hyperlink{build_2lib_2opatio_2opat_2____init_____8py}{\+\_\+\+\_\+init\+\_\+\+\_\+.\+py}} }{\pageref{build_2lib_2opatio_2opat_2____init_____8py}}{} +\item\contentsline{section}{utils/opatio/build/lib/opatio/opat/\mbox{\hyperlink{build_2lib_2opatio_2opat_2opat_8py}{opat.\+py}} }{\pageref{build_2lib_2opatio_2opat_2opat_8py}}{} +\item\contentsline{section}{utils/opatio/src/opatio/\mbox{\hyperlink{src_2opatio_2____init_____8py}{\+\_\+\+\_\+init\+\_\+\+\_\+.\+py}} }{\pageref{src_2opatio_2____init_____8py}}{} +\item\contentsline{section}{utils/opatio/src/opatio/opat/\mbox{\hyperlink{src_2opatio_2opat_2____init_____8py}{\+\_\+\+\_\+init\+\_\+\+\_\+.\+py}} }{\pageref{src_2opatio_2opat_2____init_____8py}}{} +\item\contentsline{section}{utils/opatio/src/opatio/opat/\mbox{\hyperlink{src_2opatio_2opat_2opat_8py}{opat.\+py}} }{\pageref{src_2opatio_2opat_2opat_8py}}{} \end{DoxyCompactList} diff --git a/docs/latex/refman.tex b/docs/latex/refman.tex index 8e61ba6..17db990 100644 --- a/docs/latex/refman.tex +++ b/docs/latex/refman.tex @@ -171,6 +171,10 @@ \hypersetup{pageanchor=true} %--- Begin generated contents --- +\chapter{opat\+IO python module} +\label{md_utils_opatio_readme} +\Hypertarget{md_utils_opatio_readme} +\input{md_utils_opatio_readme} \chapter{Test List} \label{test} \Hypertarget{test} @@ -197,16 +201,30 @@ \input{structOPATTable} \input{structTableIndex} \chapter{File Documentation} +\input{const_8cpp} +\input{const_8h} \input{DObject_8cpp} +\input{LockableDObject_8cpp} \input{Metadata_8cpp} \input{DObject_8h} \input{LockableDObject_8h} \input{Metadata_8h} +\input{opac_8h} +\input{opatIO_8cpp} +\input{opatIO_8h} \input{constTest_8cpp} \input{DObjectTest_8cpp} \input{LockableDObjectTest_8cpp} \input{MetadataTest_8cpp} +\input{testDObject_8cpp} \input{opatIOTest_8cpp} +\input{build_2lib_2opatio_2____init_____8py} +\input{build_2lib_2opatio_2opat_2____init_____8py} +\input{src_2opatio_2____init_____8py} +\input{src_2opatio_2opat_2____init_____8py} +\input{build_2lib_2opatio_2opat_2opat_8py} +\input{src_2opatio_2opat_2opat_8py} +\input{readme_8md} %--- End generated contents --- % Index