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Here is a list of all functions with links to the classes they belong to:

### - a -

- AddMult() : serif::pybind::PyMatrix, serif::pybind::PyOperator
- AddMultTranspose() : serif::pybind::PyMatrix, serif::pybind::PyOperator
- assembleAndFinalizeForm() : serif::polytrope::PolySolver
- assembleBlockSystem() : serif::polytrope::PolySolver
- AssembleDiagonal() : serif::pybind::PyMatrix, serif::pybind::PyOperator
- AssembleElementGrad() : serif::polytrope::polyMFEMUtils::NonlinearPowerIntegrator
- AssembleElementVector() : serif::polytrope::polyMFEMUtils::NonlinearPowerIntegrator

### - b -

- buildIndividualForms() : serif::polytrope::PolySolver

### - c -

- callAddToCache() : configTestPrivateAccessor
- callCacheSize() : configTestPrivateAccessor
- callIsKeyInCache() : configTestPrivateAccessor
- callRegisterKeyNotFound() : configTestPrivateAccessor
- CheckIfKeyUnknown() : configTestPrivateAccessor
- Composition() : serif::composition::Composition
- CompositionEntry() : serif::composition::CompositionEntry
- computeBlockOffsets() : serif::polytrope::PolySolver
- Constant() : serif::constant::Constant
- Constants() : serif::constant::Constants
- construct_jacobian_constant_terms() : serif::polytrope::PolytropeOperator
- construct_matrix_representations() : serif::polytrope::PolytropeOperator
- construct_reduced_block_offsets() : serif::polytrope::PolytropeOperator
- convert_netIn() : serif::network::approx8::Approx8Network

### - e -

- Elem() : serif::pybind::PyMatrix
- EOSio() : serif::eos::EOSio
- Eval() : serif::pybind::PyCoefficient, serif::pybind::PyVectorCoefficient
- evaluate() : serif::network::approx8::Approx8Network, serif::network::Network

### - f -

- Finalize() : serif::pybind::PyMatrix
- finalize() : serif::composition::Composition, serif::polytrope::PolytropeOperator
- finalizeMassFracMode() : serif::composition::Composition
- finalizeNumberFracMode() : serif::composition::Composition
- findCenterElement() : serif::polytrope::PolySolver

### - g -

- get() : serif::constant::Constants
- get_block_offsets() : serif::polytrope::PolytropeOperator
- get_essential_true_dofs() : serif::polytrope::PolytropeOperator
- get_free_dofs() : serif::polytrope::PolytropeOperator
- get_jacobian_operator() : serif::polytrope::PolytropeOperator
- get_preconditioner() : serif::polytrope::PolytropeOperator
- get_reduced_block_offsets() : serif::polytrope::PolytropeOperator
- get_reduced_system_size() : serif::polytrope::PolytropeOperator
- getAvailableResources() : serif::resource::ResourceManager
- getComposition() : serif::composition::Composition
- GetDofCoordinates() : serif::polytrope::PolySolver
- getEssentialTrueDof() : serif::polytrope::PolySolver
- getFilename() : serif::eos::EOSio
- getFormat() : serif::eos::EOSio
- GetGradient() : serif::polytrope::PolytropeOperator, serif::pybind::PyMatrix, serif::pybind::PyOperator
- getInstance() : serif::constant::Constants, serif::probe::LogManager, serif::resource::ResourceManager
- getLogger() : serif::probe::LogManager
- getLoggerNames() : serif::probe::LogManager
- getLoggers() : serif::probe::LogManager
- getMassFracMode() : serif::composition::CompositionEntry
- getMassFraction() : serif::composition::Composition
- GetMesh() : serif::mesh::MeshIO
- getMesh() : serif::polytrope::PolySolver
- getN() : serif::polytrope::PolySolver
- getNumberFraction() : serif::composition::Composition
- getOrder() : serif::polytrope::PolySolver
- getPhi() : serif::polytrope::PolySolver
- GetProlongation() : serif::pybind::PyMatrix, serif::pybind::PyOperator
- getRegisteredSymbols() : serif::composition::Composition
- getResource() : serif::resource::ResourceManager
- GetRestriction() : serif::pybind::PyMatrix, serif::pybind::PyOperator
- getTable() : serif::eos::EOSio
- getTheta() : serif::polytrope::PolySolver
- GMRESInverter() : serif::polytrope::GMRESInverter

### - h -

- has() : serif::constant::Constants
- hasSymbol() : serif::composition::Composition
- HELMTable() : serif::eos::helmholtz::HELMTable

### - i -

- initialize() : serif::constant::Constants
- Inverse() : serif::pybind::PyMatrix
- isFinalized() : serif::polytrope::PolytropeOperator
- IsLoaded() : serif::mesh::MeshIO
- isLoaded() : serif::constant::Constants
- isotope() : serif::composition::CompositionEntry
- isStiff() : serif::network::approx8::Approx8Network
- isValidComposition() : serif::composition::Composition
- isValidSymbol() : serif::composition::Composition

### - k -

- keys() : serif::constant::Constants

### - l -

- LinearRescale() : serif::mesh::MeshIO
- load() : serif::constant::Constants, serif::eos::EOSio, serif::resource::ResourceManager
- loadAllResources() : serif::resource::ResourceManager
- loadHelm() : serif::eos::EOSio
- loadResource() : serif::resource::ResourceManager
- LoadSolverUserParams() : serif::polytrope::PolySolver
- LogManager() : serif::probe::LogManager

### - m -

- mass_fraction() : serif::composition::CompositionEntry
- MeshIO() : serif::mesh::MeshIO
- mix() : serif::composition::Composition
- Mult() : serif::polytrope::GMRESInverter, serif::polytrope::PolytropeOperator, serif::polytrope::SchurCompliment, serif::pybind::PyMatrix, serif::pybind::PyOperator
- MultTranspose() : serif::pybind::PyMatrix, serif::pybind::PyOperator

### - n -

- Network() : serif::network::Network
- newFileLogger() : serif::probe::LogManager
- NonlinearPowerIntegrator() : serif::polytrope::polyMFEMUtils::NonlinearPowerIntegrator
- number_fraction() : serif::composition::CompositionEntry

### - o -

- operator()() : serif::network::approx8::Jacobian, serif::network::approx8::ODE
- operator+() : serif::composition::Composition
- operator=() : serif::probe::LogManager, serif::resource::ResourceManager
- operator[]() : serif::constant::Constants

### - p -

- PolySolver() : serif::polytrope::PolySolver
- PolytropeOperator() : serif::polytrope::PolytropeOperator
- populate_free_dof_array() : serif::polytrope::PolytropeOperator
- prepareMesh() : serif::polytrope::PolySolver

### - r -

- reconstruct_full_block_state_vector() : serif::polytrope::PolytropeOperator
- reconstruct_full_state_vector() : serif::polytrope::PolytropeOperator
- RecoverFEMSolution() : serif::pybind::PyMatrix, serif::pybind::PyOperator
- registerSymbol() : serif::composition::Composition
- rel_abundance() : serif::composition::CompositionEntry
- ResourceManager() : serif::resource::ResourceManager

### - s -

- saveAndViewSolution() : serif::polytrope::PolySolver
- scatter_boundary_conditions() : serif::polytrope::PolytropeOperator
- SchurCompliment() : serif::polytrope::SchurCompliment
- set_essential_true_dofs() : serif::polytrope::PolytropeOperator
- setCompositionMode() : serif::composition::Composition
- setInitialGuess() : serif::polytrope::PolySolver
- setMassFracMode() : serif::composition::CompositionEntry
- setMassFraction() : serif::composition::Composition, serif::composition::CompositionEntry
- setNumberFracMode() : serif::composition::CompositionEntry
- setNumberFraction() : serif::composition::Composition, serif::composition::CompositionEntry
- SetOperator() : serif::polytrope::SchurCompliment
- setOperatorEssentialTrueDofs() : serif::polytrope::PolySolver
- setSpecies() : serif::composition::CompositionEntry
- setStiff() : serif::network::approx8::Approx8Network
- SetTime() : serif::pybind::PyCoefficient, serif::pybind::PyVectorCoefficient
- SetUp() : constTest
- setupNewtonSolver() : serif::polytrope::PolySolver
- solve() : serif::polytrope::PolySolver
- subset() : serif::composition::Composition
- symbol() : serif::composition::CompositionEntry

### - t -

- trim() : serif::constant::Constants

### - u -

- update_inverse_nonlinear_jacobian() : serif::polytrope::PolytropeOperator
- update_inverse_schur_compliment() : serif::polytrope::PolytropeOperator
- update_preconditioner() : serif::polytrope::PolytropeOperator
- updateConstantTerms() : serif::polytrope::SchurCompliment
- updateInverseNonlinearJacobian() : serif::polytrope::SchurCompliment

### - v -

- validateComposition() : serif::composition::Composition

### - ~ -

- ~Composition() : serif::composition::Composition
- ~EOSio() : serif::eos::EOSio
- ~GMRESInverter() : serif::polytrope::GMRESInverter
- ~HELMTable() : serif::eos::helmholtz::HELMTable
- ~LogManager() : serif::probe::LogManager
- ~MeshIO() : serif::mesh::MeshIO
- ~Network() : serif::network::Network
- ~PolySolver() : serif::polytrope::PolySolver
- ~PolytropeOperator() : serif::polytrope::PolytropeOperator
- ~SchurCompliment() : serif::polytrope::SchurCompliment