feat(FieldDofMap): Completed FieldDofMap migration
also removed legacy BarotropicPolytrope implementation
This commit is contained in:
@@ -6,6 +6,32 @@ module mean_field;
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import :mapping.coefficients;
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namespace {
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using DomainSchema = mean_field::utils::domain::CoreEnvelopeVacuumDomainSchema;
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mfem::Array<int> make_domain_marker(
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const mfem::Mesh &mesh,
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const mean_field::utils::DOMAINS domain
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) {
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switch (domain) {
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case mean_field::utils::DOMAINS::CORE:
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return mean_field::utils::domain::make_attribute_marker<
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mean_field::utils::domain::Core, DomainSchema>(mesh);
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case mean_field::utils::DOMAINS::ENVELOPE:
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return mean_field::utils::domain::make_attribute_marker<
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mean_field::utils::domain::Envelope, DomainSchema>(mesh);
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case mean_field::utils::DOMAINS::ALL:
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return mean_field::utils::domain::make_attribute_marker<
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mean_field::utils::domain::All, DomainSchema>(mesh);
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case mean_field::utils::DOMAINS::STELLAR:
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return mean_field::utils::domain::make_attribute_marker<
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mean_field::utils::domain::Stellar, DomainSchema>(mesh);
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case mean_field::utils::DOMAINS::VACUUM:
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return mean_field::utils::domain::make_attribute_marker<
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mean_field::utils::domain::Vacuum, DomainSchema>(mesh);
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}
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MFEM_ABORT("Unsupported integration domain.");
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}
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template <typename FormT>
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const mfem::IntegrationRule &get_density_rule(
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const mean_field::fem::FEM &fem,
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@@ -36,14 +62,16 @@ namespace mean_field::analysis {
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mfem::LinearForm lf(fem.densityFes.get());
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mfem::GridFunctionCoefficient gf_c(&gf);
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double local_integral;
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mfem::Array<int> elem_markers;
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populate_element_mask(fem.mesh.get(), domain, elem_markers);
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mfem::Array<int> elem_markers = make_domain_marker(*fem.mesh, domain);
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const mfem::ElementTransformation &representative_transformation = *fem.mesh->GetElementTransformation(0);
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const mfem::IntegrationRule &integration_rule =
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get_density_rule<field::Density::Form::MassConservation>(fem, representative_transformation, {}, domain);
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if (fem.has_mapping() && coord_space == mapping::COORDINATE_SPACE::PHYSICAL) {
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mapping::MappedScalarCoefficient mapped_gf_c(*fem.mapping, gf_c);
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mapping::MappedScalarCoefficient mapped_gf_c(
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*fem.domainMapperStateless, *fem.displacement,
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*fem.compactificationCoordinate, gf_c
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);
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// ReSharper disable once CppDFAMemoryLeak // Disabled because MFEM
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// takes ownership so memory is not leaked
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@@ -78,12 +106,17 @@ namespace mean_field::analysis {
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const mfem::GridFunction &rho
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) {
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const int dim = fem.mesh->Dimension();
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mapping::GridFunctionMappingEvaluator mapping_evaluator(
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*fem.domainMapperStateless, *fem.displacement,
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*fem.compactificationCoordinate
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);
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mfem::Vector local_com(dim);
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local_com = 0.0;
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double local_mass = 0.0;
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for (int i = 0; i < fem.mesh->GetNE(); ++i) {
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if (fem.mesh->GetAttribute(i) == 3)
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if (!DomainSchema::template attribute_belongs_to<utils::domain::Stellar>(
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fem.mesh->GetAttribute(i)))
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continue;
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mfem::ElementTransformation *trans = fem.mesh->GetElementTransformation(i);
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const mfem::IntegrationRule &ir = get_density_rule<field::Density::Form::CenterOfMass>(
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@@ -94,18 +127,16 @@ namespace mean_field::analysis {
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const mfem::IntegrationPoint &ip = ir.IntPoint(j);
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trans->SetIntPoint(&ip);
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double weight = trans->Weight() * ip.weight;
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if (fem.has_mapping()) {
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weight *= fem.mapping->ComputeDetJ(*trans, ip);
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}
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mapping::VolumeMappingContext mapping_context;
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MFEM_VERIFY(
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mapping_evaluator.EvaluateVolume(*trans, ip, mapping_context) ==
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mapping::MappingStatus::valid,
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"Center-of-mass integration encountered an invalid mapping."
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);
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const double weight = mapping_context.quadrature.weight;
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double rho_val = rho.GetValue(i, ip);
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mfem::Vector phys_point(dim);
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if (fem.has_mapping()) {
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fem.mapping->GetPhysicalPoint(*trans, ip, phys_point);
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} else {
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trans->Transform(ip, phys_point);
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}
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const mfem::Vector &phys_point = mapping_context.mapping.physical_position;
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const double mass_term = rho_val * weight;
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local_mass += mass_term;
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@@ -151,7 +182,10 @@ namespace mean_field::analysis {
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std::unique_ptr<mfem::Coefficient> s2_coeff;
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if (fem.has_mapping()) {
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s2_coeff = std::make_unique<mapping::PhysicalPositionFunctionCoefficient>(*fem.mapping, s2_func);
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s2_coeff = std::make_unique<mapping::PhysicalPositionFunctionCoefficient>(
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*fem.domainMapperStateless, *fem.displacement,
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*fem.compactificationCoordinate, s2_func
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);
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} else {
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s2_coeff = std::make_unique<mfem::FunctionCoefficient>(s2_func);
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}
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@@ -164,12 +198,15 @@ namespace mean_field::analysis {
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const mfem::IntegrationRule &integration_rule = get_density_rule<field::Density::Form::Quadrupole>(
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fem, representative_transformation, std::array<int, 1>{2}, utils::DOMAINS::STELLAR
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);
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mfem::Array<int> stellar_markers;
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populate_element_mask(fem.mesh.get(), utils::DOMAINS::STELLAR, stellar_markers);
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mfem::Array<int> stellar_markers =
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utils::domain::make_attribute_marker<utils::domain::Stellar, DomainSchema>(*fem.mesh);
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double local_I = 0.0;
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if (fem.has_mapping()) {
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mapping::MappedScalarCoefficient mapped_integrand(*fem.mapping, I_integrand);
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mapping::MappedScalarCoefficient mapped_integrand(
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*fem.domainMapperStateless, *fem.displacement,
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*fem.compactificationCoordinate, I_integrand
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);
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auto *integrator = new mfem::DomainLFIntegrator(mapped_integrand);
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integrator->SetIntRule(&integration_rule);
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I_lf.AddDomainIntegrator(integrator, stellar_markers);
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@@ -201,23 +238,21 @@ namespace mean_field::analysis {
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}
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double local_volume = 0.0;
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mapping::GridFunctionMappingEvaluator mapping_evaluator(
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*fem.domainMapperStateless, *fem.displacement,
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*fem.compactificationCoordinate
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);
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for (int e = 0; e < mesh.GetNE(); ++e) {
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const int attr = mesh.GetAttribute(e);
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switch (domain) {
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case utils::DOMAINS::ALL:
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break;
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case utils::DOMAINS::STELLAR:
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if (attr == 3)
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continue;
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break;
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case utils::DOMAINS::VACUUM:
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if (attr != 3)
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continue;
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break;
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default:
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MFEM_ABORT("Unsupported domain type for volume computation.");
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}
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const bool selected =
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domain == utils::DOMAINS::ALL ||
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(domain == utils::DOMAINS::STELLAR &&
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DomainSchema::template attribute_belongs_to<utils::domain::Stellar>(attr)) ||
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(domain == utils::DOMAINS::VACUUM &&
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DomainSchema::template attribute_belongs_to<utils::domain::Vacuum>(attr));
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if (!selected)
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continue;
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mfem::ElementTransformation *T = mesh.GetElementTransformation(e);
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const mfem::IntegrationRule &ir =
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get_density_rule<field::Density::Form::MassConservation>(fem, *T, {}, domain);
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@@ -229,7 +264,13 @@ namespace mean_field::analysis {
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double dV = ip.weight * T->Weight();
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if (physical) {
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dV *= std::fabs(fem.mapping->ComputeDetJ(*T, ip));
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mapping::VolumeMappingContext context;
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MFEM_VERIFY(
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mapping_evaluator.EvaluateVolume(*T, ip, context) ==
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mapping::MappingStatus::valid,
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"Mesh-volume integration encountered an invalid mapping."
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);
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dV = context.quadrature.weight;
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}
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local_volume += dV;
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