Emily Boudreaux
8a0b5b2c36
Major weak rate progress which includes: A refactor of many of the public interfaces for GridFire Engines to use composition objects as opposed to raw abundance vectors. This helps prevent index mismatch errors. Further, the weak reaction class has been expanded with the majority of an implimentation, including an atomic_base derived class to allow for proper auto diff tracking of the interpolated table results. Some additional changes are that the version of fourdst and libcomposition have been bumped to versions with smarter caching of intermediate vectors and a few bug fixes.
80 lines
2.9 KiB
C++
80 lines
2.9 KiB
C++
/* ***********************************************************************
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//
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// Copyright (C) 2025 -- The 4D-STAR Collaboration
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// File Authors: Aaron Dotter, Emily Boudreaux
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// Last Modified: March 21, 2025
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//
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// 4DSSE is free software; you can use it and/or modify
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// it under the terms and restrictions the GNU General Library Public
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// License version 3 (GPLv3) as published by the Free Software Foundation.
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//
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// 4DSSE is distributed in the hope that it will be useful,
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// but WITHOUT ANY WARRANTY; without even the implied warranty of
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// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
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// See the GNU Library General Public License for more details.
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//
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// You should have received a copy of the GNU Library General Public License
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// along with this software; if not, write to the Free Software
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// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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//
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// *********************************************************************** */
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#include "gridfire/network.h"
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#include "gridfire/reaction/reaction.h"
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#include <ranges>
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#include "quill/LogMacros.h"
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namespace gridfire {
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std::vector<double> NetIn::MolarAbundance() const {
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std::vector <double> y;
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y.reserve(composition.getRegisteredSymbols().size());
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const auto [fst, snd] = composition.getComposition();
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for (const auto &name: fst | std::views::keys) {
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y.push_back(composition.getMolarAbundance(name));
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}
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return y;
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}
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Network::Network(const NetworkFormat format) :
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m_config(fourdst::config::Config::getInstance()),
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m_logManager(fourdst::logging::LogManager::getInstance()),
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m_logger(m_logManager.getLogger("log")),
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m_format(format),
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m_constants(fourdst::constant::Constants::getInstance()){
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if (format == NetworkFormat::UNKNOWN) {
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LOG_ERROR(m_logger, "nuclearNetwork::Network::Network() called with UNKNOWN format");
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m_logger->flush_log();
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throw std::runtime_error("nuclearNetwork::Network::Network() called with UNKNOWN format");
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}
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}
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NetworkFormat Network::getFormat() const {
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return m_format;
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}
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NetworkFormat Network::setFormat(const NetworkFormat format) {
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const NetworkFormat oldFormat = m_format;
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m_format = format;
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return oldFormat;
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}
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// Trim whitespace from both ends of a string
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std::string trim_whitespace(const std::string& str) {
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auto startIt = str.begin();
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const auto endIt = str.end();
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while (startIt != endIt && std::isspace(static_cast<unsigned char>(*startIt))) {
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++startIt;
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}
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if (startIt == endIt) {
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return "";
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}
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const auto ritr = std::find_if(str.rbegin(), std::string::const_reverse_iterator(startIt),
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[](const unsigned char ch){ return !std::isspace(ch); });
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return {startIt, ritr.base()};
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}
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}
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