GridFire v0.7.1_rc2
General Purpose Nuclear Network
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gridfire::engine::GraphEngine Member List

This is the complete list of members for gridfire::engine::GraphEngine, including all inherited members.

calculateAllDerivatives(const std::vector< T > &Y_in, T T9, T rho, T Ye, T mue, std::function< std::optional< size_t >(const fourdst::atomic::Species &)> speciesLookup, const std::function< bool(const reaction::Reaction &)> &reactionLookup) constgridfire::engine::GraphEngineprivate
calculateAllDerivatives(const std::vector< T > &Y_in, const T T9, const T rho, const T Ye, const T mue, const std::function< std::optional< size_t >(const fourdst::atomic::Species &)> speciesLookup, const std::function< bool(const reaction::Reaction &)> &reactionLookup) constgridfire::engine::GraphEngine
calculateAllDerivativesUsingPrecomputation(const fourdst::composition::CompositionAbstract &comp, const std::vector< double > &bare_rates, const std::vector< double > &bare_reverse_rates, double T9, double rho, const reaction::ReactionSet &activeReactions) constgridfire::engine::GraphEngineprivate
calculateEpsDerivatives(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const overridegridfire::engine::GraphEnginevirtual
calculateEpsDerivatives(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) constgridfire::engine::GraphEngine
calculateMolarReactionFlow(const reaction::Reaction &reaction, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const overridegridfire::engine::GraphEnginevirtual
calculateMolarReactionFlow(const reaction::Reaction &reaction, const std::vector< T > &Y, T T9, T rho, T Ye, T mue, const std::function< std::optional< size_t >(const fourdst::atomic::Species &)> &speciesIDLookup) constgridfire::engine::GraphEngineprivate
calculateReverseMolarReactionFlow(T T9, T rho, std::vector< T > screeningFactors, const std::vector< T > &Y, size_t reactionIndex, const reaction::Reaction &reaction) constgridfire::engine::GraphEngineprivate
calculateReverseRate(const reaction::Reaction &reaction, double T9, double rho, const fourdst::composition::CompositionAbstract &comp) constgridfire::engine::GraphEngine
calculateReverseRateTwoBody(const reaction::Reaction &reaction, double T9, double forwardRate, double expFactor) constgridfire::engine::GraphEngine
calculateReverseRateTwoBodyDerivative(const reaction::Reaction &reaction, double T9, double rho, const fourdst::composition::Composition &comp, double reverseRate) constgridfire::engine::GraphEngine
calculateRHSAndEnergy(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const overridegridfire::engine::GraphEnginevirtual
calculateRHSAndEnergy(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) constgridfire::engine::GraphEngine
collectAtomicReverseRateAtomicBases()gridfire::engine::GraphEngineprivate
collectComposition(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const overridegridfire::engine::GraphEnginevirtual
collectNetworkSpecies()gridfire::engine::GraphEngineprivate
exportToCSV(const std::string &filename) constgridfire::engine::GraphEngine
exportToDot(const std::string &filename) constgridfire::engine::GraphEngine
generateJacobianMatrix(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const overridegridfire::engine::GraphEnginevirtual
generateJacobianMatrix(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const std::vector< fourdst::atomic::Species > &activeSpecies) const overridegridfire::engine::GraphEnginevirtual
generateJacobianMatrix(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const SparsityPattern &sparsityPattern) const overridegridfire::engine::GraphEnginevirtual
generateStoichiometryMatrix() overridegridfire::engine::GraphEnginevirtual
getDepth() const overridegridfire::engine::GraphEnginevirtual
getNetReactionStoichiometry(const reaction::Reaction &reaction)gridfire::engine::GraphEnginestatic
getNetworkReactions() const overridegridfire::engine::GraphEnginevirtual
getNetworkSpecies() const overridegridfire::engine::GraphEnginevirtual
getPartitionFunction() constgridfire::engine::GraphEngine
getScreeningModel() const overridegridfire::engine::GraphEnginevirtual
getSpeciesDestructionTimescales(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const overridegridfire::engine::GraphEnginevirtual
getSpeciesDestructionTimescales(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) constgridfire::engine::GraphEngine
getSpeciesIndex(const fourdst::atomic::Species &species) const overridegridfire::engine::GraphEnginevirtual
getSpeciesStatus(const fourdst::atomic::Species &species) const overridegridfire::engine::GraphEnginevirtual
getSpeciesTimescales(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const overridegridfire::engine::GraphEnginevirtual
getSpeciesTimescales(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) constgridfire::engine::GraphEngine
getStoichiometryMatrixEntry(const fourdst::atomic::Species &species, const reaction::Reaction &reaction) const overridegridfire::engine::GraphEnginevirtual
GraphEngine(const fourdst::composition::Composition &composition, BuildDepthType=NetworkBuildDepth::Full)gridfire::engine::GraphEngineexplicit
GraphEngine(const fourdst::composition::Composition &composition, const partition::PartitionFunction &partitionFunction, BuildDepthType buildDepth=NetworkBuildDepth::Full)gridfire::engine::GraphEngineexplicit
GraphEngine(const fourdst::composition::Composition &composition, const partition::PartitionFunction &partitionFunction, BuildDepthType buildDepth, NetworkConstructionFlags reactionTypes)gridfire::engine::GraphEngineexplicit
GraphEngine(const reaction::ReactionSet &reactions)gridfire::engine::GraphEngineexplicit
involvesSpecies(const fourdst::atomic::Species &species) constgridfire::engine::GraphEngine
isPrecomputationEnabled() constgridfire::engine::GraphEngine
isStale(const NetIn &netIn) overridegridfire::engine::GraphEnginevirtual
isUsingReverseReactions() constgridfire::engine::GraphEngine
JacobianMatrixState enum namegridfire::engine::GraphEngineprivate
m_atomicReverseRatesgridfire::engine::GraphEngineprivate
m_configgridfire::engine::GraphEngineprivate
m_constantsgridfire::engine::GraphEngineprivate
m_depthgridfire::engine::GraphEngineprivate
m_epsADFungridfire::engine::GraphEnginemutableprivate
m_full_jacobian_sparsity_patterngridfire::engine::GraphEngineprivate
m_full_sparsity_setgridfire::engine::GraphEngineprivate
m_has_been_primedgridfire::engine::GraphEngineprivate
m_indexToSpeciesMapgridfire::engine::GraphEngineprivate
m_jac_workgridfire::engine::GraphEnginemutableprivate
m_jacobianMatrixStateNameMapgridfire::engine::GraphEngineprivate
m_loggergridfire::engine::GraphEngineprivate
m_networkSpeciesgridfire::engine::GraphEngineprivate
m_networkSpeciesMapgridfire::engine::GraphEngineprivate
m_partitionFunctiongridfire::engine::GraphEngineprivate
m_precomputedReactionIndexMapgridfire::engine::GraphEngineprivate
m_precomputedReactionsgridfire::engine::GraphEngineprivate
m_reactionIDMapgridfire::engine::GraphEngineprivate
m_reactionsgridfire::engine::GraphEngineprivate
m_rhsADFungridfire::engine::GraphEnginemutableprivate
m_screeningModelgridfire::engine::GraphEngineprivate
m_screeningTypegridfire::engine::GraphEngineprivate
m_speciesToIndexMapgridfire::engine::GraphEngineprivate
m_usePrecomputationgridfire::engine::GraphEngineprivate
m_useReverseReactionsgridfire::engine::GraphEngineprivate
m_weakRateInterpolatorgridfire::engine::GraphEngineprivate
mapNetInToMolarAbundanceVector(const NetIn &netIn) const overridegridfire::engine::GraphEnginevirtual
populateReactionIDMap()gridfire::engine::GraphEngineprivate
populateSpeciesToIndexMap()gridfire::engine::GraphEngineprivate
precomputeNetwork()gridfire::engine::GraphEngineprivate
primeEngine(const NetIn &netIn) overridegridfire::engine::GraphEnginevirtual
rebuild(const fourdst::composition::CompositionAbstract &comp, BuildDepthType depth) overridegridfire::engine::GraphEnginevirtual
recordADTape() constgridfire::engine::GraphEngineprivate
setNetworkReactions(const reaction::ReactionSet &reactions) overridegridfire::engine::GraphEnginevirtual
setPrecomputation(bool precompute)gridfire::engine::GraphEngine
setScreeningModel(screening::ScreeningType model) overridegridfire::engine::GraphEnginevirtual
setUseReverseReactions(bool useReverse)gridfire::engine::GraphEngine
syncInternalMaps()gridfire::engine::GraphEngineprivate
update(const NetIn &netIn) overridegridfire::engine::GraphEnginevirtual
validateConservation() constgridfire::engine::GraphEngineprivate
~Engine()=defaultgridfire::engine::Enginevirtual