This is the complete list of members for gridfire::MultiscalePartitioningEngineView, including all inherited members.

analyzeTimescalePoolConnectivity(const std::vector< std::vector< size_t > > &timescale_pools, const std::vector< double > &Y, double T9, double rho) const	gridfire::MultiscalePartitioningEngineView
buildConnectivityGraph(const std::unordered_set< size_t > &fast_reaction_indices) const	gridfire::MultiscalePartitioningEngineView	private
buildConnectivityGraph(const std::vector< size_t > &species_pool) const	gridfire::MultiscalePartitioningEngineView	private
calculateMolarReactionFlow(const reaction::Reaction &reaction, const std::vector< double > &Y_full, double T9, double rho) const override	gridfire::MultiscalePartitioningEngineView	virtual
calculateRHSAndEnergy(const std::vector< double > &Y_full, double T9, double rho) const override	gridfire::MultiscalePartitioningEngineView	virtual
constructCandidateGroups(const std::vector< std::vector< size_t > > &candidate_pools, const std::vector< double > &Y, double T9, double rho) const	gridfire::MultiscalePartitioningEngineView	private
equilibrateNetwork(const std::vector< double > &Y, double T9, double rho)	gridfire::MultiscalePartitioningEngineView
equilibrateNetwork(const NetIn &netIn)	gridfire::MultiscalePartitioningEngineView
exportToDot(const std::string &filename, const std::vector< double > &Y, const double T9, const double rho) const	gridfire::MultiscalePartitioningEngineView
generateJacobianMatrix(const std::vector< double > &Y_full, double T9, double rho) const override	gridfire::MultiscalePartitioningEngineView	virtual
gridfire::DynamicEngine::generateJacobianMatrix(const std::vector< double > &Y_dynamic, double T9, double rho, const SparsityPattern &sparsityPattern) const	gridfire::DynamicEngine	inlinevirtual
generateStoichiometryMatrix() override	gridfire::MultiscalePartitioningEngineView	virtual
getBaseEngine() const override	gridfire::MultiscalePartitioningEngineView	virtual
getDepth() const	gridfire::DynamicEngine	inlinevirtual
getDynamicSpecies() const	gridfire::MultiscalePartitioningEngineView
getFastSpecies() const	gridfire::MultiscalePartitioningEngineView
getJacobianMatrixEntry(int i_full, int j_full) const override	gridfire::MultiscalePartitioningEngineView	virtual
getNetworkReactions() const override	gridfire::MultiscalePartitioningEngineView	virtual
getNetworkSpecies() const override	gridfire::MultiscalePartitioningEngineView	virtual
getScreeningModel() const override	gridfire::MultiscalePartitioningEngineView	virtual
getSpeciesDestructionTimescales(const std::vector< double > &Y, double T9, double rho) const override	gridfire::MultiscalePartitioningEngineView	virtual
getSpeciesIndex(const fourdst::atomic::Species &species) const override	gridfire::MultiscalePartitioningEngineView	virtual
getSpeciesTimescales(const std::vector< double > &Y, double T9, double rho) const override	gridfire::MultiscalePartitioningEngineView	virtual
getStoichiometryMatrixEntry(int speciesIndex, int reactionIndex) const override	gridfire::MultiscalePartitioningEngineView	virtual
identifyMeanSlowestPool(const std::vector< std::vector< size_t > > &pools, const std::vector< double > &Y, double T9, double rho) const	gridfire::MultiscalePartitioningEngineView	private
isStale(const NetIn &netIn) override	gridfire::MultiscalePartitioningEngineView	virtual
m_activeReactionIndices	gridfire::MultiscalePartitioningEngineView	private
m_activeSpeciesIndices	gridfire::MultiscalePartitioningEngineView	private
m_algebraic_species	gridfire::MultiscalePartitioningEngineView	private
m_algebraic_species_indices	gridfire::MultiscalePartitioningEngineView	private
m_baseEngine	gridfire::MultiscalePartitioningEngineView	private
m_cacheStats	gridfire::MultiscalePartitioningEngineView	mutableprivate
m_dynamic_species	gridfire::MultiscalePartitioningEngineView	private
m_dynamic_species_indices	gridfire::MultiscalePartitioningEngineView	private
m_logger	gridfire::MultiscalePartitioningEngineView	private
m_qse_abundance_cache	gridfire::MultiscalePartitioningEngineView	mutableprivate
m_qse_groups	gridfire::MultiscalePartitioningEngineView	private
mapNetInToMolarAbundanceVector(const NetIn &netIn) const override	gridfire::MultiscalePartitioningEngineView	virtual
MultiscalePartitioningEngineView(GraphEngine &baseEngine)	gridfire::MultiscalePartitioningEngineView	explicit
partitionByTimescale(const std::vector< double > &Y_full, double T9, double rho) const	gridfire::MultiscalePartitioningEngineView	private
partitionNetwork(const std::vector< double > &Y, double T9, double rho)	gridfire::MultiscalePartitioningEngineView
partitionNetwork(const NetIn &netIn)	gridfire::MultiscalePartitioningEngineView
primeEngine(const NetIn &netIn) override	gridfire::MultiscalePartitioningEngineView	virtual
QSEPartition typedef	gridfire::MultiscalePartitioningEngineView	private
rebuild(const fourdst::composition::Composition &comp, BuildDepthType depth)	gridfire::DynamicEngine	inlinevirtual
setNetworkReactions(const reaction::LogicalReactionSet &reactions) override	gridfire::MultiscalePartitioningEngineView	virtual
setScreeningModel(screening::ScreeningType model) override	gridfire::MultiscalePartitioningEngineView	virtual
solveQSEAbundances(const std::vector< double > &Y_full, double T9, double rho)	gridfire::MultiscalePartitioningEngineView	private
update(const NetIn &netIn) override	gridfire::MultiscalePartitioningEngineView	virtual
validateGroupsWithFluxAnalysis(const std::vector< QSEGroup > &candidate_groups, const std::vector< double > &Y, double T9, double rho) const	gridfire::MultiscalePartitioningEngineView	private
~Engine()=default	gridfire::Engine	virtual
~EngineView()=default	gridfire::EngineView< DynamicEngine >	virtual