| AdaptiveEngineView(DynamicEngine &baseEngine) | gridfire::AdaptiveEngineView | explicit |
| calculateAllReactionFlows(const NetIn &netIn, std::vector< double > &out_Y_Full) const | gridfire::AdaptiveEngineView | private |
| calculateMolarReactionFlow(const reaction::Reaction &reaction, const std::vector< double > &Y_culled, double T9, double rho) const override | gridfire::AdaptiveEngineView | virtual |
| calculateRHSAndEnergy(const std::vector< double > &Y_culled, const double T9, const double rho) const override | gridfire::AdaptiveEngineView | virtual |
| Config typedef | gridfire::AdaptiveEngineView | private |
| constructReactionIndexMap() const | gridfire::AdaptiveEngineView | private |
| constructSpeciesIndexMap() const | gridfire::AdaptiveEngineView | private |
| cullReactionsByFlow(const std::vector< ReactionFlow > &allFlows, const std::unordered_set< fourdst::atomic::Species > &reachableSpecies, const std::vector< double > &Y_full, double maxFlow) const | gridfire::AdaptiveEngineView | private |
| finalizeActiveSet(const std::vector< const reaction::LogicalReaction * > &finalReactions) | gridfire::AdaptiveEngineView | private |
| findReachableSpecies(const NetIn &netIn) const | gridfire::AdaptiveEngineView | private |
| generateJacobianMatrix(const std::vector< double > &Y_culled, const double T9, const double rho) override | gridfire::AdaptiveEngineView | virtual |
| generateStoichiometryMatrix() override | gridfire::AdaptiveEngineView | virtual |
| getBaseEngine() const override | gridfire::AdaptiveEngineView | inlinevirtual |
| getJacobianMatrixEntry(const int i_culled, const int j_culled) const override | gridfire::AdaptiveEngineView | virtual |
| getNetworkReactions() const override | gridfire::AdaptiveEngineView | virtual |
| getNetworkSpecies() const override | gridfire::AdaptiveEngineView | virtual |
| getScreeningModel() const override | gridfire::AdaptiveEngineView | virtual |
| getSpeciesTimescales(const std::vector< double > &Y_culled, double T9, double rho) const override | gridfire::AdaptiveEngineView | virtual |
| getStoichiometryMatrixEntry(const int speciesIndex_culled, const int reactionIndex_culled) const override | gridfire::AdaptiveEngineView | virtual |
| LogManager typedef | gridfire::AdaptiveEngineView | private |
| m_activeReactions | gridfire::AdaptiveEngineView | private |
| m_activeSpecies | gridfire::AdaptiveEngineView | private |
| m_baseEngine | gridfire::AdaptiveEngineView | private |
| m_config | gridfire::AdaptiveEngineView | private |
| m_isStale | gridfire::AdaptiveEngineView | private |
| m_logger | gridfire::AdaptiveEngineView | private |
| m_reactionIndexMap | gridfire::AdaptiveEngineView | private |
| m_speciesIndexMap | gridfire::AdaptiveEngineView | private |
| mapCulledToFull(const std::vector< double > &culled) const | gridfire::AdaptiveEngineView | private |
| mapCulledToFullReactionIndex(size_t culledReactionIndex) const | gridfire::AdaptiveEngineView | private |
| mapCulledToFullSpeciesIndex(size_t culledSpeciesIndex) const | gridfire::AdaptiveEngineView | private |
| mapFullToCulled(const std::vector< double > &full) const | gridfire::AdaptiveEngineView | private |
| setScreeningModel(screening::ScreeningType model) override | gridfire::AdaptiveEngineView | virtual |
| update(const NetIn &netIn) override | gridfire::AdaptiveEngineView | virtual |
| validateState() const | gridfire::AdaptiveEngineView | private |
| ~Engine()=default | gridfire::Engine | virtual |
| ~EngineView()=default | gridfire::EngineView< DynamicEngine > | virtual |