Commit Graph

22 Commits

Author SHA1 Message Date
ed1c5a1ac7 feat(solver): added CVODE solver from SUNDIALS 2025-08-15 12:11:32 -04:00
0b77f2e269 refactor(reaction): refactored to an abstract reaction class in prep for weak reactions 2025-08-14 13:33:46 -04:00
2c6a8d18a7 build(fourdst/libconfig): version bump to yaml-cpp with cstdint applied 2025-07-29 08:50:28 -04:00
9ae9236a80 build(pybind11): added wrap file 2025-07-29 08:31:50 -04:00
90826e5053 build(subprojects): removed recursive wrap files 2025-07-29 08:28:42 -04:00
cc3708fda5 build(GridFire): building on gcc and clang
resolved some issues preventing GridFire from building on both gcc and clang. Also resolved all warnings on both compilers.
2025-07-24 10:20:44 -04:00
c3bc75a7f4 docs(GridFire): added loads of docs and supressed yaml-cpp shadow warnings 2025-07-24 08:37:52 -04:00
f20bffc411 feat(python): added robust python bindings covering the entire codebase 2025-07-23 16:26:30 -04:00
6a22cb65b8 feat(GridFire): stabalized network, increased performance, evolving over 10Gyr timescales now with ~correct results 2025-07-22 12:48:24 -04:00
ddfa66d86f build(libcomposition): updated libcomposition version pin to 1.4.0 to get more convient getters 2025-07-14 14:48:57 -04:00
7012eb819a feat(MultiscalePartitioningEngineView): added *much* more robust qse group identifiction and solving 2025-07-10 09:36:05 -04:00
e5ad284778 feat(partition-functions): added framework and some concrete partition functions
GroundState partition function, Rauscher&Thielemann partition function, and composite partition function added
2025-07-02 11:32:45 -04:00
96bae90524 build(libcomposition): version bump 2025-06-29 14:53:57 -04:00
cd191cff23 feat(GridFire): major design changes
Switching to an Engine + solver design. Also brought xxHash and Eigen in. Working on QSE and Culling.
2025-06-26 15:13:46 -04:00
dd03873bc9 fix(GraphNetwork): working on loads of small bugs
Fized stoichiometry matrix initialization, added penames to reablib reactions, began work on LogicalReaction to sum the contributions of different fitting functions provided by reaclib
2025-06-23 15:18:56 -04:00
a5639cca58 docs(readme): major readme update 2025-06-21 16:54:23 -04:00
970ea299fe fix(gtest.wrap): made gtest.wrap a true wrap file 2025-06-21 13:39:29 -04:00
7484197a6b fix(subprojects): removed bad build artifacts that should not have been commited 2025-06-21 13:36:22 -04:00
8bc48b8d19 feat(GridFire): brought gridfire up to where network module in SERiF was before splitting it off 2025-06-21 13:18:38 -04:00
a6bab8f037 refactor(GridFire): started bringing in libconstants 2025-06-21 06:36:08 -04:00
c167357a3b feat(pybind11): added infra to compile with pybind11 2025-04-30 11:39:36 -04:00
2d27b119bd build(quill): added quill as a subproject
quill provides a robust and very efficient asyncronous and thread safe logging module. I have brought this in to handle logging
2025-02-23 11:25:11 -05:00