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fix(GraphNetwork): working on loads of small bugs

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Fized stoichiometry matrix initialization, added penames to reablib reactions, began work on LogicalReaction to sum the contributions of different fitting functions provided by reaclib
This commit is contained in:
Emily Boudreaux
2025-06-23 15:18:56 -04:00
parent 9f6e360b0f
commit dd03873bc9
31 changed files with 101449 additions and 19120 deletions
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14
assets/static/reaclib/meson.build
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@@ -1,14 +1,20 @@
required_headers = [
'reaclib.h',
'reactions.h',
'gridfire/reaclib.h',
'gridfire/reactions.h',
]
foreach h : required_headers
if not cpp.has_header(h, include_directories: include_directories('include'))
error('SERiF requires the header file ' + h + ' to be present in the assets/static/reaclib/include directory.')
error('GridFire requires the header file ' + h + ' to be present in the assets/static/reaclib/include/gridfire directory.')
endif
endforeach
reaclib_reactions_dep = declare_dependency(
include_directories: include_directories('include'),
)
message('✅ SERiF reaclib_reactions dependency declared')
message('✅ GridFire reaclib_reactions dependency declared')
to_install_headers = [
'include/gridfire/reaclib.h',
'include/gridfire/reactions.h',
]
install_headers(to_install_headers, subdir: 'gridfire/gridfire')