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feat(validation): added more of the scripts to make paper figures

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Emily Boudreaux
2026-04-20 12:41:10 -04:00
parent 3a22792fd1
commit bbd702904a
38 changed files with 130679 additions and 2069 deletions
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4
validation/ManuscriptFigures/BBQCompare/bbq_compare.py
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@@ -153,13 +153,15 @@ def quantify_engine_error(df_base, df_approx, r_base: NetOut, r_approx: NetOut,
def main(save_show):
C = init_composition()
netIn = init_netIn(10**7.1760912591, 10**2.2041199827, 1e17, C)
netIn = init_netIn(10**7.1760912591, 10**2.2041199827, 1e18, C)
stepLogger = StepLogger()
engine_graph = GraphEngine(C, 4)
blob = engine_graph.constructStateBlob()
print(f"Gridfire Using: {len(engine_graph.getNetworkReactions(blob))} Reactions and {len(engine_graph.getNetworkSpecies(blob))} Species")
print(engine_graph.getNetworkReactions(blob))
print(engine_graph.getNetworkSpecies(blob))
solver_ctx_graph = PointSolverContext(blob)
solver_ctx_graph.stdout_logging = False