docs(docs): asdded and cleaned up docs
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<title>GridFire: src/network/lib/screening/screening_bare.cpp Source File</title>
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<title>GridFire: src/lib/screening/screening_bare.cpp Source File</title>
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@@ -140,7 +140,7 @@ $(function(){initNavTree('screening__bare_8cpp_source.html',''); initResizable(t
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<div class="ttc" id="aclassgridfire_1_1screening_1_1_bare_screening_model_html_a51119d705267e0b415aae8b4881d8c96"><div class="ttname"><a href="classgridfire_1_1screening_1_1_bare_screening_model.html#a51119d705267e0b415aae8b4881d8c96">gridfire::screening::BareScreeningModel::ADDouble</a></div><div class="ttdeci">CppAD::AD< double > ADDouble</div><div class="ttdoc">Alias for CppAD Automatic Differentiation type for double precision.</div><div class="ttdef"><b>Definition</b> <a href="screening__bare_8h_source.html#l00023">screening_bare.h:23</a></div></div>
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<div class="ttc" id="aclassgridfire_1_1screening_1_1_bare_screening_model_html_a6c93b72c8ca34623127f0846d8dee50a"><div class="ttname"><a href="classgridfire_1_1screening_1_1_bare_screening_model.html#a6c93b72c8ca34623127f0846d8dee50a">gridfire::screening::BareScreeningModel::calculateFactors_impl</a></div><div class="ttdeci">std::vector< T > calculateFactors_impl(const reaction::LogicalReactionSet &reactions, const std::vector< fourdst::atomic::Species > &species, const std::vector< T > &Y, const T T9, const T rho) const</div><div class="ttdoc">Template implementation for calculating screening factors.</div><div class="ttdef"><b>Definition</b> <a href="screening__bare_8h_source.html#l00126">screening_bare.h:126</a></div></div>
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<div class="ttc" id="aclassgridfire_1_1screening_1_1_bare_screening_model_html_ac35ad34c5da7e1b5087552aa5c83fe60"><div class="ttname"><a href="classgridfire_1_1screening_1_1_bare_screening_model.html#ac35ad34c5da7e1b5087552aa5c83fe60">gridfire::screening::BareScreeningModel::calculateScreeningFactors</a></div><div class="ttdeci">std::vector< double > calculateScreeningFactors(const reaction::LogicalReactionSet &reactions, const std::vector< fourdst::atomic::Species > &species, const std::vector< double > &Y, const double T9, const double rho) const override</div><div class="ttdoc">Calculates screening factors, which are always 1.0.</div><div class="ttdef"><b>Definition</b> <a href="#l00022">screening_bare.cpp:22</a></div></div>
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<div class="ttc" id="anamespacegridfire_1_1reaction_html_aa86f08712565f278adacc7cd2361eb31"><div class="ttname"><a href="namespacegridfire_1_1reaction.html#aa86f08712565f278adacc7cd2361eb31">gridfire::reaction::LogicalReactionSet</a></div><div class="ttdeci">TemplatedReactionSet< LogicalReaction > LogicalReactionSet</div><div class="ttdoc">A set of logical reactions.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8h_source.html#l00557">reaction.h:557</a></div></div>
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<div class="ttc" id="anamespacegridfire_1_1reaction_html_aa86f08712565f278adacc7cd2361eb31"><div class="ttname"><a href="namespacegridfire_1_1reaction.html#aa86f08712565f278adacc7cd2361eb31">gridfire::reaction::LogicalReactionSet</a></div><div class="ttdeci">TemplatedReactionSet< LogicalReaction > LogicalReactionSet</div><div class="ttdoc">A set of logical reactions.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8h_source.html#l00563">reaction.h:563</a></div></div>
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<div class="ttc" id="anamespacegridfire_1_1screening_html"><div class="ttname"><a href="namespacegridfire_1_1screening.html">gridfire::screening</a></div><div class="ttdef"><b>Definition</b> <a href="screening__abstract_8h_source.html#l00011">screening_abstract.h:11</a></div></div>
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<div class="ttc" id="anamespacegridfire_1_1screening_html_ae7dd1a7ccb7bf3c05084094ab008d8a3"><div class="ttname"><a href="namespacegridfire_1_1screening.html#ae7dd1a7ccb7bf3c05084094ab008d8a3">gridfire::screening::ADDouble</a></div><div class="ttdeci">CppAD::AD< double > ADDouble</div><div class="ttdef"><b>Definition</b> <a href="#l00011">screening_bare.cpp:11</a></div></div>
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<div class="ttc" id="ascreening__bare_8h_html"><div class="ttname"><a href="screening__bare_8h.html">screening_bare.h</a></div></div>
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