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fix(python-bindings): Updated python bindings to new interface

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The python bindings now work with the polymorphic reaction class and the CVODE solver
This commit is contained in:
Emily Boudreaux
2025-10-30 15:05:08 -04:00
parent 23df87f915
commit 7fded59814
27 changed files with 962 additions and 255 deletions
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13
src/include/gridfire/engine/engine_graph.h
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@@ -730,7 +730,18 @@ namespace gridfire {
BuildDepthType depth
) override;
void lumpReactions();
/**
* @brief This will return the input comp with the molar abundances of any species not registered in that but
* registered in the engine active species set to 0.0.
* @note Effectively this method does not change input composition; rather it ensures that all species which
* can be tracked by an instance of GraphEngine are registered in the composition object.
* @note If a species is in the input comp but not in the network
* @param comp Input Composition
* @return A new composition where all members of the active species set are registered. And any members not in comp
* have a molar abundance set to 0.
* @throws BadCollectionError If the input composition contains species not present in the network species set
*/
fourdst::composition::Composition collectComposition(fourdst::composition::Composition &comp) const override;
private: