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refactor(.gitignore): removed html/ from .gitignore

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Emily Boudreaux
2025-07-01 11:40:51 -04:00
parent 0c16e81e98
commit 7df6f60912
197 changed files with 6248 additions and 4744 deletions
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@@ -102,26 +102,29 @@ $(function(){initNavTree('functions_m.html',''); initResizable(true); });
<div class="textblock">Here is a list of all class members with links to the classes they belong to:</div>
<h3><a id="index_m" name="index_m"></a>- m -</h3><ul>
<li>m_activeReactions&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a19fc7e02e216b797aa643fa35e429800">gridfire::AdaptiveEngineView</a></li>
<li>m_activeSpecies&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#af4bc9fc6e4afcd6a53c49ca6e2a95940">gridfire::AdaptiveEngineView</a></li>
<li>m_baseEngine&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a4d38b46be9f25c7afe7ddd2b284253f8">gridfire::AdaptiveEngineView</a></li>
<li>m_activeReactions&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a19fc7e02e216b797aa643fa35e429800">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#ae012da2b1f6169cb13e6075a73353ab2">gridfire::FileDefinedEngineView</a></li>
<li>m_activeSpecies&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#af4bc9fc6e4afcd6a53c49ca6e2a95940">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a299a0c61aa4f26029c770013c9feff5e">gridfire::FileDefinedEngineView</a></li>
<li>m_baseEngine&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a4d38b46be9f25c7afe7ddd2b284253f8">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#ad8454c98fa9a4bb45dc81059bc51fc81">gridfire::FileDefinedEngineView</a></li>
<li>m_chapter&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a16f9cbb6269817099d3dc07d4e63da7b">gridfire::reaction::Reaction</a></li>
<li>m_config&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a14171a9ccc45a63996a967c72983de30">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a3b17102b143435ddfdc015d7a50c4b18">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1_network.html#a9f8802012728ef5fea0e8cd465044e09">gridfire::Network</a>, <a class="el" href="classgridfire_1_1solver_1_1_direct_network_solver.html#a0d1b52d06b0521e7c556d75cd8d2ffe6">gridfire::solver::DirectNetworkSolver</a>, <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a7d19b6e50db34d38c81afec76bbedee1">gridfire::solver::QSENetworkSolver</a></li>
<li>m_config&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a14171a9ccc45a63996a967c72983de30">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a7a80966c023ae722239491af58609362">gridfire::FileDefinedEngineView</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a3b17102b143435ddfdc015d7a50c4b18">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#aea206c3a7600db8d657666fef88fa20d">gridfire::io::MESANetworkFileParser</a>, <a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#a4061e99bd77a3de0d6d9e317bfc74874">gridfire::io::SimpleReactionListFileParser</a>, <a class="el" href="classgridfire_1_1_network.html#a9f8802012728ef5fea0e8cd465044e09">gridfire::Network</a>, <a class="el" href="classgridfire_1_1solver_1_1_direct_network_solver.html#a0d1b52d06b0521e7c556d75cd8d2ffe6">gridfire::solver::DirectNetworkSolver</a>, <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a7d19b6e50db34d38c81afec76bbedee1">gridfire::solver::QSENetworkSolver</a></li>
<li>m_constants&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#a0837bab6dcd111d9075c9343b90d64f1">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1_network.html#adf7002883160101c9f9d1b376b265410">gridfire::Network</a></li>
<li>m_dt0&#160;:&#160;<a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#a6ed8022834e9541b3e547dd867648b0f">gridfire::approx8::Approx8Network</a></li>
<li>m_dynamicSpeciesIndices&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#a08ce53701b152f3ce108c1c18ce64de2">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html#a2071ce797f94ae1a3ea6d934748672ce">gridfire::solver::QSENetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#a3ac1ef529627d21f7d1ad718dc87f7f9">gridfire::solver::QSENetworkSolver::RHSFunctor</a></li>
<li>m_engine&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html#a56f8b2b222fb2a7dac190ead0babfdd0">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html#a04f8c84e46e6fbd0977e50fda4829d1a">gridfire::solver::DirectNetworkSolver::RHSFunctor</a>, <a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html#a724924d94eaf82b67d9988a55c3261e8">gridfire::solver::NetworkSolverStrategy&lt; EngineT &gt;</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#a93b46ca95ddf9e4d21d02700621e6285">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html#aaaa82eff96e6127a6de05444f730e43a">gridfire::solver::QSENetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#a0d8d28a6559cfed5e7cd683523d49b2c">gridfire::solver::QSENetworkSolver::RHSFunctor</a></li>
<li>m_fileName&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a1b343998b93955025a589b2b4541e33b">gridfire::FileDefinedEngineView</a></li>
<li>m_filename&#160;:&#160;<a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ab7f82597abf17f16c401bcdf528bd099">gridfire::io::MESANetworkFileParser</a></li>
<li>m_format&#160;:&#160;<a class="el" href="classgridfire_1_1_network.html#a37218e18f1bdbda7be94aa230f47dd18">gridfire::Network</a></li>
<li>m_id&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a7e21865d3dafb65d2bf3b051ee55c4c2">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111">gridfire::reaction::ReactionSet</a></li>
<li>m_isStale&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a63580db57e0f48f508906a11ccfd465e">gridfire::AdaptiveEngineView</a></li>
<li>m_id&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_templated_reaction_set.html#a5fda3af5ea9ae0ecfb60a61a9e07f5b4">gridfire::reaction::TemplatedReactionSet&lt; ReactionT &gt;</a></li>
<li>m_isStale&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a63580db57e0f48f508906a11ccfd465e">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a6e421bc748933be31bed9ff53f12b595">gridfire::FileDefinedEngineView</a></li>
<li>m_isViewInitialized&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#ab07e68fd418ab058f890502d191b3f18">gridfire::solver::QSENetworkSolver</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#a81f964b87457847d7de13fed18499283">gridfire::solver::QSENetworkSolver::RHSFunctor</a></li>
<li>m_jacobianMatrix&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#a2f1718c89d4aaad028102724d18fa910">gridfire::GraphEngine</a></li>
<li>m_lastSeenConditions&#160;:&#160;<a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a3c9d46c8f5c519854cd65309a588772f">gridfire::solver::QSENetworkSolver</a></li>
<li>m_logger&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#ac5bdbe46f87d38d9f23ece5743dcd193">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a483979fc154adc88d029b3b672066d53">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1_network.html#a960d309defc570f92d296ce4b93920e5">gridfire::Network</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ad5c1f6a1642c47437dbf8cc20a32b51e">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a7044d0a1d59d85502ce554e4ec2167e4">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb">gridfire::reaction::ReactionSet</a>, <a class="el" href="classgridfire_1_1solver_1_1_direct_network_solver.html#a093aa89fd23c2fe03266e286871c7079">gridfire::solver::DirectNetworkSolver</a>, <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a428b49fa7878559665363de06f1a44a7">gridfire::solver::QSENetworkSolver</a></li>
<li>m_logger&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#ac5bdbe46f87d38d9f23ece5743dcd193">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a9d93633ed4ab68de94b7274f879a0432">gridfire::FileDefinedEngineView</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a483979fc154adc88d029b3b672066d53">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ab9c683289d48e58edf06bf59215b4937">gridfire::io::MESANetworkFileParser</a>, <a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#acef7eafe3cbea159259f69c88d309b66">gridfire::io::SimpleReactionListFileParser</a>, <a class="el" href="classgridfire_1_1_network.html#a960d309defc570f92d296ce4b93920e5">gridfire::Network</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a7044d0a1d59d85502ce554e4ec2167e4">gridfire::reaction::Reaction</a>, <a class="el" href="classgridfire_1_1reaction_1_1_templated_reaction_set.html#ac6fcc5b08938b73ff6dac680e5bf28d9">gridfire::reaction::TemplatedReactionSet&lt; ReactionT &gt;</a>, <a class="el" href="classgridfire_1_1screening_1_1_weak_screening_model.html#a0a4d7d6d36dbe7b764b613d34f18386f">gridfire::screening::WeakScreeningModel</a>, <a class="el" href="classgridfire_1_1solver_1_1_direct_network_solver.html#a093aa89fd23c2fe03266e286871c7079">gridfire::solver::DirectNetworkSolver</a>, <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html#a9cf3e5b5206b5cd8650cbf620ca5007b">gridfire::solver::DirectNetworkSolver::RHSFunctor</a>, <a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html#a428b49fa7878559665363de06f1a44a7">gridfire::solver::QSENetworkSolver</a></li>
<li>m_logManager&#160;:&#160;<a class="el" href="classgridfire_1_1_network.html#a0bb7c7be9a3c3212ef6dcbf26dcacb16">gridfire::Network</a></li>
<li>m_networkSpecies&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#a92d26068ba139e47d335f5fe9e2814cc">gridfire::GraphEngine</a></li>
<li>m_networkSpeciesMap&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#a30e09ed0bce6aa5fc89beaa316a7b827">gridfire::GraphEngine</a></li>
<li>m_numSpecies&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html#a3f624142212b5e6ff65f5706953fe353">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html#ac4a1af03d2a4fbc5cc2407b8a6833147">gridfire::solver::DirectNetworkSolver::RHSFunctor</a></li>
<li>m_parser&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a0a9b07176cb93b54c677b6ce71fda500">gridfire::FileDefinedEngineView</a></li>
<li>m_peName&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a6124aa9fc2306349e1dd879a37923248">gridfire::reaction::Reaction</a></li>
<li>m_products&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a4b5607ed413acdf29539b8a57461e49e">gridfire::reaction::Reaction</a></li>
<li>m_QSESpeciesIndices&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#abaf28fdd93e881ef56c24f541be7492d">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html#a1b92391170eb46771bd499aa8d115334">gridfire::solver::QSENetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#a6be7259897a47ce480b289144b06e269">gridfire::solver::QSENetworkSolver::RHSFunctor</a></li>
@@ -130,15 +133,17 @@ $(function(){initNavTree('functions_m.html',''); initResizable(true); });
<li>m_rates&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">gridfire::reaction::LogicalReaction</a></li>
<li>m_reactants&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a87a065b3c7806bcdb5eadb7de2978a11">gridfire::reaction::Reaction</a></li>
<li>m_reactionIDMap&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#a5d6cc63b99b467c2a976d1fbaaa1dfa3">gridfire::GraphEngine</a></li>
<li>m_reactionIndexMap&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a21c6e33bbf8c18fd5b5eaabb469054de">gridfire::AdaptiveEngineView</a></li>
<li>m_reactionNameMap&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a49280e0f29d2d4e322d76831688f7f27">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#ad3e2715e9e4d6b4f1dc54b969a1322f4">gridfire::reaction::ReactionSet</a></li>
<li>m_reactions&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#acb7c4f5108b0efeae48ad15598e808c3">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">gridfire::reaction::LogicalReactionSet</a>, <a class="el" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">gridfire::reaction::ReactionSet</a></li>
<li>m_reactionIndexMap&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a21c6e33bbf8c18fd5b5eaabb469054de">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#af0a77a4749a15aae87bdecfccbd1736e">gridfire::FileDefinedEngineView</a></li>
<li>m_reactionNameMap&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_templated_reaction_set.html#a3a4c2448865580001fd3c797b9f56979">gridfire::reaction::TemplatedReactionSet&lt; ReactionT &gt;</a></li>
<li>m_reactions&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#acb7c4f5108b0efeae48ad15598e808c3">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1reaction_1_1_templated_reaction_set.html#a5962968fe478c79250e9d88d80a87600">gridfire::reaction::TemplatedReactionSet&lt; ReactionT &gt;</a></li>
<li>m_reverse&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a0b0b9ac498080aae91ffd466d1ae85a9">gridfire::reaction::Reaction</a></li>
<li>m_rho&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html#a932c41aa9f1aa38e56a03b27cd2ccda4">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html#a7d4f7f04c4ee6f0b519194f87aa265e7">gridfire::solver::DirectNetworkSolver::RHSFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#ab0a0d4c166e97b971543cbbf2b0a1a2e">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html#a0907f7b6c1a87baf5e39fbc17a30df82">gridfire::solver::QSENetworkSolver::JacobianFunctor</a>, <a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#adc0f8e655af42f414dcb220a7224f261">gridfire::solver::QSENetworkSolver::RHSFunctor</a></li>
<li>m_rhsADFun&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#a2e22b111f6d00ecc9e3804a71f1ce876">gridfire::GraphEngine</a></li>
<li>m_screeningModel&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#af17cf3762abac3efcab9a8e87c961210">gridfire::GraphEngine</a></li>
<li>m_screeningType&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#a52edc3e88f1e8fc497e1e63972d63c80">gridfire::GraphEngine</a></li>
<li>m_sourceLabel&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_reaction.html#a0185c6be5465d113f25e00aee1297cd6">gridfire::reaction::Reaction</a></li>
<li>m_sources&#160;:&#160;<a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a7fe91d24e20ebc76d612f6ad742f476f">gridfire::reaction::LogicalReaction</a></li>
<li>m_speciesIndexMap&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a5f66204a0ff5b27eed243afddecb0093">gridfire::AdaptiveEngineView</a></li>
<li>m_speciesIndexMap&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a5f66204a0ff5b27eed243afddecb0093">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_file_defined_engine_view.html#aebd4a1a584f2784f1df3d503645be03b">gridfire::FileDefinedEngineView</a></li>
<li>m_speciesToIndexMap&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#ad8237c252145a75092202d00f5e1ddf7">gridfire::GraphEngine</a></li>
<li>m_stiff&#160;:&#160;<a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#a697cb49bebc8d0659eb791500c451c67">gridfire::approx8::Approx8Network</a>, <a class="el" href="classgridfire_1_1_network.html#aefe364ae5af783e19e7b93bfd475566e">gridfire::Network</a></li>
<li>m_stoichiometryMatrix&#160;:&#160;<a class="el" href="classgridfire_1_1_graph_engine.html#ad1cb5fd32efc37668e2d9ecf0c72ad24">gridfire::GraphEngine</a></li>
@@ -146,11 +151,16 @@ $(function(){initNavTree('functions_m.html',''); initResizable(true); });
<li>m_tMax&#160;:&#160;<a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#a6fadf388f07c160f1887a3cb72eaa869">gridfire::approx8::Approx8Network</a></li>
<li>m_y&#160;:&#160;<a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html#abf9f13ff532917ddac4a7d987698836d">gridfire::approx8::Approx8Network</a></li>
<li>m_Y_QSE&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html#a02c23ef20d616bf5a591a274b66cd75a">gridfire::solver::QSENetworkSolver::RHSFunctor</a></li>
<li>m_YDynamic&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#af4f10300bde1e8e07b896bfca6335401">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a></li>
<li>m_YFull&#160;:&#160;<a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html#a2dca32a9e0bea5aea2a565f94b99a8de">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a></li>
<li>mapCulledToFull()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a68695f056b660e91285b7e5a931612e1">gridfire::AdaptiveEngineView</a></li>
<li>mapCulledToFullReactionIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a91e742642d8a8d9ec0620779927e5101">gridfire::AdaptiveEngineView</a></li>
<li>mapCulledToFullSpeciesIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a256d14a333f9401039b826cc889761a8">gridfire::AdaptiveEngineView</a></li>
<li>mapFullToCulled()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a3d9d8e862d1c2f0a8ba460c57f6a7f44">gridfire::AdaptiveEngineView</a></li>
<li>mapFullToView()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a97e5ee4651dbe6754678fe96e4702fee">gridfire::FileDefinedEngineView</a></li>
<li>mapViewToFull()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#ac231044e37e0962f664f8465e1ccb022">gridfire::FileDefinedEngineView</a></li>
<li>mapViewToFullReactionIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#ae7d6f0ff9076d59d1245c047bbd1bdb9">gridfire::FileDefinedEngineView</a></li>
<li>mapViewToFullSpeciesIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a8d2c6b9a33b9c8c172bbd2c2e2e9ffaf">gridfire::FileDefinedEngineView</a></li>
<li>MESANetworkFileParser()&#160;:&#160;<a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ac5963d0da6780de753df996b490f8d2c">gridfire::io::MESANetworkFileParser</a></li>
<li>mIon&#160;:&#160;<a class="el" href="structgridfire_1_1approx8_1_1_approx8_net.html#a928b7810cb2993d59d40aa73c2faef18">gridfire::approx8::Approx8Net</a></li>
<li>MolarAbundance()&#160;:&#160;<a class="el" href="structgridfire_1_1_net_in.html#a47781e8d5503e3b4f12d669e2cbcfb65">gridfire::NetIn</a></li>
</ul>