docs(docs): added extensive docs

This commit is contained in:
2025-07-01 15:06:22 -04:00
parent 5b4db3ea43
commit 131f61c9e7
134 changed files with 5101 additions and 2191 deletions

View File

@@ -105,48 +105,50 @@ $(function(){initNavTree('hierarchy.html',''); initResizable(true); });
<div class="textblock">This inheritance list is sorted roughly, but not completely, alphabetically:</div><div class="directory">
<div class="levels">[detail level <span onclick="javascript:dynsection.toggleLevel(1);">1</span><span onclick="javascript:dynsection.toggleLevel(2);">2</span><span onclick="javascript:dynsection.toggleLevel(3);">3</span>]</div><table class="directory">
<tr id="row_0_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1approx8_1_1_approx8_net.html" target="_self">gridfire::approx8::Approx8Net</a></td><td class="desc">Contains constants and arrays related to the nuclear network </td></tr>
<tr id="row_1_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1dynamic_q_s_e_species_indices.html" target="_self">gridfire::solver::dynamicQSESpeciesIndices</a></td><td class="desc">Structure to hold indices of dynamic and QSE species </td></tr>
<tr id="row_2_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html" target="_self">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a></td><td class="desc">Functor for calculating the residual and Jacobian for the QSE species using Eigen </td></tr>
<tr id="row_3_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_3_" class="arrow" onclick="dynsection.toggleFolder('3_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine.html" target="_self">gridfire::Engine</a></td><td class="desc">Abstract base class for a reaction network engine </td></tr>
<tr id="row_3_0_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_3_0_" class="arrow" onclick="dynsection.toggleFolder('3_0_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_dynamic_engine.html" target="_self">gridfire::DynamicEngine</a></td><td class="desc">Abstract class for engines supporting Jacobian and stoichiometry operations </td></tr>
<tr id="row_3_0_0_" class="odd"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_adaptive_engine_view.html" target="_self">gridfire::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
<tr id="row_3_0_1_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_file_defined_engine_view.html" target="_self">gridfire::FileDefinedEngineView</a></td><td class="desc"></td></tr>
<tr id="row_3_0_2_" class="odd"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_graph_engine.html" target="_self">gridfire::GraphEngine</a></td><td class="desc">A reaction network engine that uses a graph-based representation </td></tr>
<tr id="row_4_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; EngineT &gt;</a></td><td class="desc">Abstract base class for a "view" of a reaction network engine </td></tr>
<tr id="row_5_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_5_" class="arrow" onclick="dynsection.toggleFolder('5_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; DynamicEngine &gt;</a></td><td class="desc"></td></tr>
<tr id="row_5_0_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_adaptive_engine_view.html" target="_self">gridfire::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
<tr id="row_5_1_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_file_defined_engine_view.html" target="_self">gridfire::FileDefinedEngineView</a></td><td class="desc"></td></tr>
<tr id="row_6_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_logical_reaction_set_01_4.html" target="_self">std::hash&lt; gridfire::reaction::LogicalReactionSet &gt;</a></td><td class="desc"></td></tr>
<tr id="row_7_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html" target="_self">std::hash&lt; gridfire::reaction::Reaction &gt;</a></td><td class="desc"></td></tr>
<tr id="row_8_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html" target="_self">std::hash&lt; gridfire::reaction::ReactionSet &gt;</a></td><td class="desc"></td></tr>
<tr id="row_9_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1approx8_1_1_jacobian.html" target="_self">gridfire::approx8::Jacobian</a></td><td class="desc">Functor to calculate the <a class="el" href="structgridfire_1_1approx8_1_1_jacobian.html" title="Functor to calculate the Jacobian matrix for implicit solvers.">Jacobian</a> matrix for implicit solvers </td></tr>
<tr id="row_10_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html" target="_self">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a></td><td class="desc">Functor for calculating the Jacobian matrix </td></tr>
<tr id="row_11_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html" target="_self">gridfire::solver::QSENetworkSolver::JacobianFunctor</a></td><td class="desc">Functor for calculating the Jacobian matrix of the ODEs for the dynamic species </td></tr>
<tr id="row_12_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_net_in.html" target="_self">gridfire::NetIn</a></td><td class="desc"></td></tr>
<tr id="row_13_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_net_out.html" target="_self">gridfire::NetOut</a></td><td class="desc"></td></tr>
<tr id="row_14_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_14_" class="arrow" onclick="dynsection.toggleFolder('14_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_network.html" target="_self">gridfire::Network</a></td><td class="desc"></td></tr>
<tr id="row_14_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html" target="_self">gridfire::approx8::Approx8Network</a></td><td class="desc">Class for the Approx8 nuclear reaction network </td></tr>
<tr id="row_15_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_15_" class="arrow" onclick="dynsection.toggleFolder('15_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html" target="_self">gridfire::io::NetworkFileParser</a></td><td class="desc"></td></tr>
<tr id="row_15_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html" target="_self">gridfire::io::MESANetworkFileParser</a></td><td class="desc"></td></tr>
<tr id="row_15_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html" target="_self">gridfire::io::SimpleReactionListFileParser</a></td><td class="desc"></td></tr>
<tr id="row_16_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html" target="_self">gridfire::solver::NetworkSolverStrategy&lt; EngineT &gt;</a></td><td class="desc">Abstract base class for network solver strategies </td></tr>
<tr id="row_17_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_17_" class="arrow" onclick="dynsection.toggleFolder('17_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html" target="_self">gridfire::solver::NetworkSolverStrategy&lt; DynamicEngine &gt;</a></td><td class="desc"></td></tr>
<tr id="row_17_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_direct_network_solver.html" target="_self">gridfire::solver::DirectNetworkSolver</a></td><td class="desc">A network solver that directly integrates the reaction network ODEs </td></tr>
<tr id="row_17_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html" target="_self">gridfire::solver::QSENetworkSolver</a></td><td class="desc">A network solver that uses a Quasi-Steady-State Equilibrium (QSE) approach </td></tr>
<tr id="row_18_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1approx8_1_1_o_d_e.html" target="_self">gridfire::approx8::ODE</a></td><td class="desc">Functor to calculate the derivatives for the <a class="el" href="structgridfire_1_1approx8_1_1_o_d_e.html" title="Functor to calculate the derivatives for the ODE solver.">ODE</a> solver </td></tr>
<tr id="row_19_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1io_1_1_parsed_network_data.html" target="_self">gridfire::io::ParsedNetworkData</a></td><td class="desc"></td></tr>
<tr id="row_20_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html" target="_self">gridfire::reaction::RateCoefficientSet</a></td><td class="desc">Holds the seven coefficients for the REACLIB rate equation </td></tr>
<tr id="row_21_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_21_" class="arrow" onclick="dynsection.toggleFolder('21_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" target="_self">gridfire::reaction::Reaction</a></td><td class="desc">Represents a single nuclear reaction from a specific data source </td></tr>
<tr id="row_21_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html" target="_self">gridfire::reaction::LogicalReaction</a></td><td class="desc">Represents a "logical" reaction that aggregates rates from multiple sources </td></tr>
<tr id="row_22_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_adaptive_engine_view_1_1_reaction_flow.html" target="_self">gridfire::AdaptiveEngineView::ReactionFlow</a></td><td class="desc">A struct to hold a reaction and its flow rate </td></tr>
<tr id="row_23_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html" target="_self">gridfire::reaclib::ReactionRecord</a></td><td class="desc"></td></tr>
<tr id="row_24_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html" target="_self">gridfire::solver::DirectNetworkSolver::RHSFunctor</a></td><td class="desc">Functor for calculating the right-hand side of the ODEs </td></tr>
<tr id="row_25_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html" target="_self">gridfire::solver::QSENetworkSolver::RHSFunctor</a></td><td class="desc">Functor for calculating the right-hand side of the ODEs for the dynamic species </td></tr>
<tr id="row_26_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_26_" class="arrow" onclick="dynsection.toggleFolder('26_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1screening_1_1_screening_model.html" target="_self">gridfire::screening::ScreeningModel</a></td><td class="desc"></td></tr>
<tr id="row_26_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1screening_1_1_bare_screening_model.html" target="_self">gridfire::screening::BareScreeningModel</a></td><td class="desc"></td></tr>
<tr id="row_26_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1screening_1_1_weak_screening_model.html" target="_self">gridfire::screening::WeakScreeningModel</a></td><td class="desc"></td></tr>
<tr id="row_27_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_step_derivatives.html" target="_self">gridfire::StepDerivatives&lt; T &gt;</a></td><td class="desc">Structure holding derivatives and energy generation for a network step </td></tr>
<tr id="row_28_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_templated_reaction_set.html" target="_self">gridfire::reaction::TemplatedReactionSet&lt; ReactionT &gt;</a></td><td class="desc"></td></tr>
<tr id="row_1_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_graph_engine_1_1constants.html" target="_self">gridfire::GraphEngine::constants</a></td><td class="desc"></td></tr>
<tr id="row_2_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1dynamic_q_s_e_species_indices.html" target="_self">gridfire::solver::dynamicQSESpeciesIndices</a></td><td class="desc">Structure to hold indices of dynamic and QSE species </td></tr>
<tr id="row_3_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_eigen_functor.html" target="_self">gridfire::solver::QSENetworkSolver::EigenFunctor&lt; T &gt;</a></td><td class="desc">Functor for calculating the residual and Jacobian for the QSE species using Eigen </td></tr>
<tr id="row_4_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_4_" class="arrow" onclick="dynsection.toggleFolder('4_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine.html" target="_self">gridfire::Engine</a></td><td class="desc">Abstract base class for a reaction network engine </td></tr>
<tr id="row_4_0_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_4_0_" class="arrow" onclick="dynsection.toggleFolder('4_0_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_dynamic_engine.html" target="_self">gridfire::DynamicEngine</a></td><td class="desc">Abstract class for engines supporting Jacobian and stoichiometry operations </td></tr>
<tr id="row_4_0_0_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_adaptive_engine_view.html" target="_self">gridfire::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
<tr id="row_4_0_1_" class="odd"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_file_defined_engine_view.html" target="_self">gridfire::FileDefinedEngineView</a></td><td class="desc">An engine view that uses a user-defined reaction network from a file </td></tr>
<tr id="row_4_0_2_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_graph_engine.html" target="_self">gridfire::GraphEngine</a></td><td class="desc">A reaction network engine that uses a graph-based representation </td></tr>
<tr id="row_5_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; EngineT &gt;</a></td><td class="desc">Abstract base class for a "view" of a reaction network engine </td></tr>
<tr id="row_6_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_6_" class="arrow" onclick="dynsection.toggleFolder('6_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; DynamicEngine &gt;</a></td><td class="desc"></td></tr>
<tr id="row_6_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_adaptive_engine_view.html" target="_self">gridfire::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
<tr id="row_6_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_file_defined_engine_view.html" target="_self">gridfire::FileDefinedEngineView</a></td><td class="desc">An engine view that uses a user-defined reaction network from a file </td></tr>
<tr id="row_7_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_logical_reaction_set_01_4.html" target="_self">std::hash&lt; gridfire::reaction::LogicalReactionSet &gt;</a></td><td class="desc"></td></tr>
<tr id="row_8_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html" target="_self">std::hash&lt; gridfire::reaction::Reaction &gt;</a></td><td class="desc"></td></tr>
<tr id="row_9_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html" target="_self">std::hash&lt; gridfire::reaction::ReactionSet &gt;</a></td><td class="desc"></td></tr>
<tr id="row_10_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1approx8_1_1_jacobian.html" target="_self">gridfire::approx8::Jacobian</a></td><td class="desc">Functor to calculate the <a class="el" href="structgridfire_1_1approx8_1_1_jacobian.html" title="Functor to calculate the Jacobian matrix for implicit solvers.">Jacobian</a> matrix for implicit solvers </td></tr>
<tr id="row_11_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html" target="_self">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a></td><td class="desc">Functor for calculating the Jacobian matrix </td></tr>
<tr id="row_12_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_jacobian_functor.html" target="_self">gridfire::solver::QSENetworkSolver::JacobianFunctor</a></td><td class="desc">Functor for calculating the Jacobian matrix of the ODEs for the dynamic species </td></tr>
<tr id="row_13_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_net_in.html" target="_self">gridfire::NetIn</a></td><td class="desc"></td></tr>
<tr id="row_14_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_net_out.html" target="_self">gridfire::NetOut</a></td><td class="desc"></td></tr>
<tr id="row_15_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_15_" class="arrow" onclick="dynsection.toggleFolder('15_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_network.html" target="_self">gridfire::Network</a></td><td class="desc"></td></tr>
<tr id="row_15_0_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html" target="_self">gridfire::approx8::Approx8Network</a></td><td class="desc">Class for the Approx8 nuclear reaction network </td></tr>
<tr id="row_16_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_16_" class="arrow" onclick="dynsection.toggleFolder('16_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html" target="_self">gridfire::io::NetworkFileParser</a></td><td class="desc">An abstract base class for network file parsers </td></tr>
<tr id="row_16_0_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html" target="_self">gridfire::io::MESANetworkFileParser</a></td><td class="desc">A parser for MESA-format network files </td></tr>
<tr id="row_16_1_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html" target="_self">gridfire::io::SimpleReactionListFileParser</a></td><td class="desc">A parser for simple text files containing a list of reactions </td></tr>
<tr id="row_17_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html" target="_self">gridfire::solver::NetworkSolverStrategy&lt; EngineT &gt;</a></td><td class="desc">Abstract base class for network solver strategies </td></tr>
<tr id="row_18_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_18_" class="arrow" onclick="dynsection.toggleFolder('18_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_network_solver_strategy.html" target="_self">gridfire::solver::NetworkSolverStrategy&lt; DynamicEngine &gt;</a></td><td class="desc"></td></tr>
<tr id="row_18_0_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_direct_network_solver.html" target="_self">gridfire::solver::DirectNetworkSolver</a></td><td class="desc">A network solver that directly integrates the reaction network ODEs </td></tr>
<tr id="row_18_1_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1solver_1_1_q_s_e_network_solver.html" target="_self">gridfire::solver::QSENetworkSolver</a></td><td class="desc">A network solver that uses a Quasi-Steady-State Equilibrium (QSE) approach </td></tr>
<tr id="row_19_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1approx8_1_1_o_d_e.html" target="_self">gridfire::approx8::ODE</a></td><td class="desc">Functor to calculate the derivatives for the <a class="el" href="structgridfire_1_1approx8_1_1_o_d_e.html" title="Functor to calculate the derivatives for the ODE solver.">ODE</a> solver </td></tr>
<tr id="row_20_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1io_1_1_parsed_network_data.html" target="_self">gridfire::io::ParsedNetworkData</a></td><td class="desc">Holds the data parsed from a network file </td></tr>
<tr id="row_21_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_graph_engine_1_1_precomputed_reaction.html" target="_self">gridfire::GraphEngine::PrecomputedReaction</a></td><td class="desc"></td></tr>
<tr id="row_22_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html" target="_self">gridfire::reaction::RateCoefficientSet</a></td><td class="desc">Holds the seven coefficients for the REACLIB rate equation </td></tr>
<tr id="row_23_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_23_" class="arrow" onclick="dynsection.toggleFolder('23_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_reaction.html" target="_self">gridfire::reaction::Reaction</a></td><td class="desc">Represents a single nuclear reaction from a specific data source </td></tr>
<tr id="row_23_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_logical_reaction.html" target="_self">gridfire::reaction::LogicalReaction</a></td><td class="desc">Represents a "logical" reaction that aggregates rates from multiple sources </td></tr>
<tr id="row_24_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_adaptive_engine_view_1_1_reaction_flow.html" target="_self">gridfire::AdaptiveEngineView::ReactionFlow</a></td><td class="desc">A struct to hold a reaction and its flow rate </td></tr>
<tr id="row_25_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1reaclib_1_1_reaction_record.html" target="_self">gridfire::reaclib::ReactionRecord</a></td><td class="desc"></td></tr>
<tr id="row_26_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_functor.html" target="_self">gridfire::solver::DirectNetworkSolver::RHSFunctor</a></td><td class="desc">Functor for calculating the right-hand side of the ODEs </td></tr>
<tr id="row_27_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_q_s_e_network_solver_1_1_r_h_s_functor.html" target="_self">gridfire::solver::QSENetworkSolver::RHSFunctor</a></td><td class="desc">Functor for calculating the right-hand side of the ODEs for the dynamic species </td></tr>
<tr id="row_28_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_28_" class="arrow" onclick="dynsection.toggleFolder('28_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1screening_1_1_screening_model.html" target="_self">gridfire::screening::ScreeningModel</a></td><td class="desc">An abstract base class for plasma screening models </td></tr>
<tr id="row_28_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1screening_1_1_bare_screening_model.html" target="_self">gridfire::screening::BareScreeningModel</a></td><td class="desc">A screening model that applies no screening effect </td></tr>
<tr id="row_28_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1screening_1_1_weak_screening_model.html" target="_self">gridfire::screening::WeakScreeningModel</a></td><td class="desc">Implements the weak screening model based on the Debye-Hückel approximation </td></tr>
<tr id="row_29_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_step_derivatives.html" target="_self">gridfire::StepDerivatives&lt; T &gt;</a></td><td class="desc">Structure holding derivatives and energy generation for a network step </td></tr>
<tr id="row_30_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1reaction_1_1_templated_reaction_set.html" target="_self">gridfire::reaction::TemplatedReactionSet&lt; ReactionT &gt;</a></td><td class="desc"></td></tr>
</table>
</div><!-- directory -->
</div><!-- contents -->